Rodentia ANCESTRAL SPECIES 10 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000162721 ENSGT00940000164798 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Rodentia_B ANCESTRAL SPECIES 16 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00700000106222 ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Myomorpha ANCESTRAL SPECIES 6 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000162721 ENSGT00940000164798 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Muroidea ANCESTRAL SPECIES 13 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00700000106222 ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00940000154972.fb ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000000062.x.b.l.a ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00940000154972.fb ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000183733 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b Cricetinae ANCESTRAL SPECIES 29 ENSGT00950000183189.a.b.b ENSGT00390000000062.x.b.l.a ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00940000154972.fb ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000183733 #34 ENSGT00940000153460.c.b ENSGT00510000047104 ENSGT00390000016655.a.a.a.b.j Golden Hamster MODERN SPECIES 788 Fgf13 (ENSMAUG00000008666) #22 Magea13 (ENSMAUG00000019340) #23 Zic3 (ENSMAUG00000009402) #24 Gpr101 (ENSMAUG00000000743) #25 Tm9sf5 (ENSMAUG00000018307) #26 Rbmx (ENSMAUG00000019654) #27 ENSMAUG00000008083 #28 Cd40lg (ENSMAUG00000019910) #29 Vgll1 (ENSMAUG00000019769) #30 Htatsf1 (ENSMAUG00000007235) #31 Brs3 (ENSMAUG00000019309) #32 ENSMAUG00000011586 #33 ENSMAUG00000000915 #34 Map7d3 (ENSMAUG00000000471) #35 Fhl1 (ENSMAUG00000014161) #36 ENSMAUG00000019556 #37 Chinese hamster chok1gshd MODERN SPECIES 16 ENSCGRG00001016997 Slitrk2 (ENSCGRG00001010877) 4930447F04Rik (ENSCGRG00001021811) Ctag2 (ENSCGRG00001024950) Slitrk4 (ENSCGRG00001005530) Magea9 (ENSCGRG00001005254) Gm6760 (ENSCGRG00001016891) Magec2 (ENSCGRG00001021825) Ldoc1 (ENSCGRG00001009400) Sox3 (ENSCGRG00001011737) Gm7073 (ENSCGRG00001022592) Atp11c (ENSCGRG00001020356) Mcf2 (ENSCGRG00001021302) F9 (ENSCGRG00001015312) ENSCGRG00001017965 Fgf13 (ENSCGRG00001014336) #22 Magea13 (ENSCGRG00001010626) #23 ENSCGRG00001018083 Zic3 (ENSCGRG00001024527) #24 Gpr101 (ENSCGRG00001012303) #25 Tm9sf5 (ENSCGRG00001002099) #26 Rbmx (ENSCGRG00001015786) #27 Arhgef6 (ENSCGRG00001012788) #28 Cd40lg (ENSCGRG00001020263) #29 Vgll1 (ENSCGRG00001001771) #30 Htatsf1 (ENSCGRG00001021602) #31 Brs3 (ENSCGRG00001000147) #32 ENSCGRG00001000280 #33 ENSCGRG00001022999 #34 Fhl1 (ENSCGRG00001018833) #36 Slc9a6 (ENSCGRG00001008142) Cricetidae_B ANCESTRAL SPECIES 28 ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00940000154972.fb ENSGT00700000106038.A ENSGT00940000162721 ENSGT00940000164798 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000183733 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b Prairie vole MODERN SPECIES 360 Ctag2 (ENSMOCG00000017014) ENSMOCG00000014952 Slitrk4 (ENSMOCG00000008180) ENSMOCG00000017215 Magec2 (ENSMOCG00000016294) ENSMOCG00000006967 Ldoc1 (ENSMOCG00000008324) ENSMOCG00000013955 Sox3 (ENSMOCG00000009062) Gm7073 (ENSMOCG00000018667) ENSMOCG00000012975 Atp11c (ENSMOCG00000002605) ENSMOCG00000007642 Mcf2 (ENSMOCG00000007145) F9 (ENSMOCG00000010515) Fgf13 (ENSMOCG00000000865) #22 Magea13 (ENSMOCG00000006923) #23 ENSMOCG00000002300 Zic3 (ENSMOCG00000020544) #24 Gpr101 (ENSMOCG00000019682) #25 Rbmx (ENSMOCG00000018048) #27 ENSMOCG00000012399 #28 Cd40lg (ENSMOCG00000007638) #29 ENSMOCG00000021293 ENSMOCG00000023007 #31 Brs3 (ENSMOCG00000021756) #32 ENSMOCG00000020722 #33 ENSMOCG00000013515 #34 Map7d3 (ENSMOCG00000010703) #35 Fhl1 (ENSMOCG00000019051) #36 Slc9a6 (ENSMOCG00000017739) Northern American deer mouse MODERN SPECIES 475 Magea9 (ENSPEMG00000024116) Gm6760 (ENSPEMG00000013903) ENSPEMG00000024166 ENSPEMG00000021044 Magec2 (ENSPEMG00000020864) ENSPEMG00000026579 ENSPEMG00000031332 ENSPEMG00000024934 ENSPEMG00000023481 ENSPEMG00000029307 Sox3 (ENSPEMG00000023890) Gm715 (ENSPEMG00000025763) Atp11c (ENSPEMG00000023535) Mcf2 (ENSPEMG00000001372) F9 (ENSPEMG00000010184) Fgf13 (ENSPEMG00000015509) #22 Magea13 (ENSPEMG00000023742) #23 Zic3 (ENSPEMG00000022168) #24 Gpr101 (ENSPEMG00000025689) #25 Tm9sf5 (ENSPEMG00000022942) #26 Rbmx (ENSPEMG00000029371) #27 Arhgef6 (ENSPEMG00000021523) #28 Cd40lg (ENSPEMG00000023170) #29 Vgll1 (ENSPEMG00000022343) #30 Htatsf1 (ENSPEMG00000022397) #31 Brs3 (ENSPEMG00000022868) #32 ENSPEMG00000022946 #33 Map7d3 (ENSPEMG00000021400) #35 Fhl1 (ENSPEMG00000022628) #36 Slc9a6 (ENSPEMG00000023480) Mmgt1 (ENSPEMG00000029255) Murinae ANCESTRAL SPECIES 14 ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00520000060073 ENSGT00940000154972.fb ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Mus ANCESTRAL SPECIES 9 ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00520000060073 ENSGT00940000154972.fb ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Mus_A ANCESTRAL SPECIES 15 ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00520000060073 ENSGT00940000154972.fb ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Ryukyu mouse MODERN SPECIES 19 Slitrk2 (MGP_CAROLIEiJ_G0033119) 4930447F04Rik (MGP_CAROLIEiJ_G0033118) Ctag2 (MGP_CAROLIEiJ_G0033117) Slitrk4 (MGP_CAROLIEiJ_G0033116) Magea9 (MGP_CAROLIEiJ_G0033115) Gm6760 (MGP_CAROLIEiJ_G0033114) MGP_CAROLIEiJ_G0033113 Magec2 (MGP_CAROLIEiJ_G0033112) Ldoc1 (MGP_CAROLIEiJ_G0033111) MGP_CAROLIEiJ_G0033110 Sox3 (MGP_CAROLIEiJ_G0033109) Gm7073 (MGP_CAROLIEiJ_G0033108) Atp11c (MGP_CAROLIEiJ_G0033107) Mcf2 (MGP_CAROLIEiJ_G0033106) F9 (MGP_CAROLIEiJ_G0033105) Fgf13 (MGP_CAROLIEiJ_G0033104) #22 Magea13 (MGP_CAROLIEiJ_G0033103) #23 MGP_CAROLIEiJ_G0033102 Zic3 (MGP_CAROLIEiJ_G0033101) #24 Gpr101 (MGP_CAROLIEiJ_G0033100) #25 Tm9sf5 (MGP_CAROLIEiJ_G0033099) #26 Rbmx (MGP_CAROLIEiJ_G0033098) #27 Arhgef6 (MGP_CAROLIEiJ_G0033097) #28 Cd40lg (MGP_CAROLIEiJ_G0033096) #29 MGP_CAROLIEiJ_G0033095 #30 Htatsf1 (MGP_CAROLIEiJ_G0033094) #31 Brs3 (MGP_CAROLIEiJ_G0033093) #32 Adgrg4 (MGP_CAROLIEiJ_G0033092) #33 Map7d3 (MGP_CAROLIEiJ_G0033091) #35 Fhl1 (MGP_CAROLIEiJ_G0033090) #36 Slc9a6 (MGP_CAROLIEiJ_G0033089) Mus_B ANCESTRAL SPECIES 14 ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00520000060073 ENSGT00940000154972.fb ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 Mouse MODERN SPECIES 37 Gm1140 (ENSMUSG00000079578) Slitrk2 (ENSMUSG00000036790) 4930447F04Rik (ENSMUSG00000031182) Ctag2 (ENSMUSG00000031181) Slitrk4 (ENSMUSG00000046699) Magea9 (ENSMUSG00000031179) Gm6760 (ENSMUSG00000079579) Magec2 (ENSMUSG00000045330) Ldoc1 (ENSMUSG00000057615) Sox3 (ENSMUSG00000045179) Gm715 (ENSMUSG00000082226) Gm7073 (ENSMUSG00000079583) Atp11c (ENSMUSG00000062949) Mcf2 (ENSMUSG00000031139) F9 (ENSMUSG00000031138) Fgf13 (ENSMUSG00000031137) #22 Magea13 (ENSMUSG00000046180) #23 Zic3 (ENSMUSG00000067860) #24 Gpr101 (ENSMUSG00000036357) #25 Tm9sf5 (ENSMUSG00000079584) #26 Rbmx (ENSMUSG00000031134) #27 Arhgef6 (ENSMUSG00000031133) #28 Cd40lg (ENSMUSG00000031132) #29 Vgll1 (ENSMUSG00000031131) #30 Htatsf1 (ENSMUSG00000067873) #31 Brs3 (ENSMUSG00000031130) #32 Adgrg4 (ENSMUSG00000053852) #33 Map7d3 (ENSMUSG00000067878) #35 Fhl1 (ENSMUSG00000023092) #36 Slc9a6 (ENSMUSG00000060681) Mmgt1 (ENSMUSG00000061273) Mus_C ANCESTRAL SPECIES 27 ENSGT00390000000062.x.b.l.a ENSGT00940000161248 ENSGT00860000136220 ENSGT00410000025802.g.b.q.b ENSGT00940000160971 ENSGT00940000154972.eb.b.a.a ENSGT00700000106222 ENSGT00520000060073 ENSGT00940000154972.fb ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 spretus MODERN SPECIES 19 MGP_SPRETEiJ_G0034273 Slitrk2 (MGP_SPRETEiJ_G0034272) 4930447F04Rik (MGP_SPRETEiJ_G0034271) Ctag2 (MGP_SPRETEiJ_G0034270) Slitrk4 (MGP_SPRETEiJ_G0034269) Magea9 (MGP_SPRETEiJ_G0034268) Gm6760 (MGP_SPRETEiJ_G0034267) MGP_SPRETEiJ_G0034266 Magec2 (MGP_SPRETEiJ_G0034265) Ldoc1 (MGP_SPRETEiJ_G0034264) Sox3 (MGP_SPRETEiJ_G0034263) Gm7073 (MGP_SPRETEiJ_G0034262) Atp11c (MGP_SPRETEiJ_G0034261) Mcf2 (MGP_SPRETEiJ_G0034260) F9 (MGP_SPRETEiJ_G0034259) Fgf13 (MGP_SPRETEiJ_G0034258) #22 Magea13 (MGP_SPRETEiJ_G0034257) #23 Zic3 (MGP_SPRETEiJ_G0034256) #24 Gpr101 (MGP_SPRETEiJ_G0034255) #25 Tm9sf5 (MGP_SPRETEiJ_G0034254) #26 Rbmx (MGP_SPRETEiJ_G0034253) #27 Arhgef6 (MGP_SPRETEiJ_G0034252) #28 Cd40lg (MGP_SPRETEiJ_G0034251) #29 Vgll1 (MGP_SPRETEiJ_G0034250) #30 Htatsf1 (MGP_SPRETEiJ_G0034249) #31 Brs3 (MGP_SPRETEiJ_G0034248) #32 Adgrg4 (MGP_SPRETEiJ_G0034247) #33 Map7d3 (MGP_SPRETEiJ_G0034246) #35 Fhl1 (MGP_SPRETEiJ_G0034245) #36 Slc9a6 (MGP_SPRETEiJ_G0034244) Mmgt1 (MGP_SPRETEiJ_G0034243) Steppe mouse MODERN SPECIES 2356 Fgf13 (ENSMSIG00000013334) #22 Shrew mouse MODERN SPECIES 23 MGP_PahariEiJ_G0031661 Slitrk2 (MGP_PahariEiJ_G0031660) 4930447F04Rik (MGP_PahariEiJ_G0031659) Ctag2 (MGP_PahariEiJ_G0031658) Slitrk4 (MGP_PahariEiJ_G0031657) Magea9 (MGP_PahariEiJ_G0031656) Gm6760 (MGP_PahariEiJ_G0031655) MGP_PahariEiJ_G0031654 Magec2 (MGP_PahariEiJ_G0031653) Ldoc1 (MGP_PahariEiJ_G0031652) Sox3 (MGP_PahariEiJ_G0031651) Gm7073 (MGP_PahariEiJ_G0031650) Atp11c (MGP_PahariEiJ_G0031649) MGP_PahariEiJ_G0031648 F9 (MGP_PahariEiJ_G0031647) Fgf13 (MGP_PahariEiJ_G0031646) #22 Magea13 (MGP_PahariEiJ_G0031645) #23 Zic3 (MGP_PahariEiJ_G0031644) #24 Gpr101 (MGP_PahariEiJ_G0031643) #25 MGP_PahariEiJ_G0031642 #26 Rbmx (MGP_PahariEiJ_G0031641) #27 Arhgef6 (MGP_PahariEiJ_G0031640) #28 Cd40lg (MGP_PahariEiJ_G0031639) #29 Zfx (MGP_PahariEiJ_G0031638) Vgll1 (MGP_PahariEiJ_G0031637) #30 MGP_PahariEiJ_G0031636 #31 Brs3 (MGP_PahariEiJ_G0031635) #32 Adgrg4 (MGP_PahariEiJ_G0031634) #33 Map7d3 (MGP_PahariEiJ_G0031633) #35 Fhl1 (MGP_PahariEiJ_G0031632) #36 Slc9a6 (MGP_PahariEiJ_G0031631) Upper Galilee mountains blind mole rat MODERN SPECIES 1779 Slitrk4 (ENSNGAG00000003850) Ldoc1 (ENSNGAG00000001475) Atp11c (ENSNGAG00000000607) Mcf2 (ENSNGAG00000014425) F9 (ENSNGAG00000013959) Fgf13 (ENSNGAG00000012709) #22 Zic3 (ENSNGAG00000023346) #24 Lesser Egyptian jerboa MODERN SPECIES 53 Pomt1 (ENSJJAG00000019337) ENSJJAG00000009295 Plpp7 (ENSJJAG00000023043) Fam78a (ENSJJAG00000010847) ENSJJAG00000011735 ENSJJAG00000022526 Slitrk4 (ENSJJAG00000014216) Ldoc1 (ENSJJAG00000010596) Sox3 (ENSJJAG00000012521) ENSJJAG00000000576 Atp11c (ENSJJAG00000005439) Mcf2 (ENSJJAG00000018143) F9 (ENSJJAG00000023266) ENSJJAG00000010816 ENSJJAG00000018813 Fgf13 (ENSJJAG00000016169) #22 Magea13 (ENSJJAG00000010090) #23 ENSJJAG00000010694 ENSJJAG00000020542 Zic3 (ENSJJAG00000022714) #24 Gpr101 (ENSJJAG00000022761) #25 ENSJJAG00000013266 Rbmx (ENSJJAG00000023855) #27 ENSJJAG00000011211 ENSJJAG00000010302 #28 Cd40lg (ENSJJAG00000022579) #29 ENSJJAG00000014597 #31 Brs3 (ENSJJAG00000017913) #32 Adgrg4 (ENSJJAG00000009866) #33 Fhl1 (ENSJJAG00000022369) #36 Slc9a6 (ENSJJAG00000014615) Kangaroo rat MODERN SPECIES 408 Ids (ENSDORG00000026027) Aff2 (ENSDORG00000015215) Fmr1 (ENSDORG00000012501) Slitrk2 (ENSDORG00000000545) ENSDORG00000005920 Slitrk4 (ENSDORG00000001489) ENSDORG00000026987 Ldoc1 (ENSDORG00000011028) Sox3 (ENSDORG00000027035) ENSDORG00000027706 ENSDORG00000027206 ENSDORG00000026314 Atp11c (ENSDORG00000003661) Mcf2 (ENSDORG00000006306) F9 (ENSDORG00000003933) Fgf13 (ENSDORG00000023968) #22 Zic3 (ENSDORG00000025481) #24 Gpr101 (ENSDORG00000011583) #25 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000162721 ENSGT00940000164798 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 ENSGT00390000016655.a.a.a.b Hystricomorpha ANCESTRAL SPECIES 57 ENSGT00940000162864.d #23 ENSGT00940000154972 ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104.gb.a Hystricomorpha_a ANCESTRAL SPECIES 80 ENSGT00940000162721 ENSGT00940000162359 ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104.gb.a ENSGT00390000016655.a.a.a.b Hystricomorpha_b ANCESTRAL SPECIES 115 ENSGT00940000162359 ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104.gb.a ENSGT00390000016655.a.a.a.b ENSGT00390000016655.a.b Long-tailed chinchilla MODERN SPECIES 196 ENSCLAG00000017550 UTP25 (ENSCLAG00000004405) IRF6 (ENSCLAG00000003528) C1orf74 (ENSCLAG00000004768) TRAF3IP3 (ENSCLAG00000004809) HSD11B1 (ENSCLAG00000001865) ENSCLAG00000017530 LAMB3 (ENSCLAG00000002447) CAMK1G (ENSCLAG00000002854) PLXNA2 (ENSCLAG00000002998) SOX3 (ENSCLAG00000003169) ENSCLAG00000003218 ATP11C (ENSCLAG00000005103) MCF2 (ENSCLAG00000005765) F9 (ENSCLAG00000006998) FGF13 (ENSCLAG00000001764) #22 ZIC3 (ENSCLAG00000001934) #24 GPR101 (ENSCLAG00000002046) #25 RBMXL1 (ENSCLAG00000002258) ##27 ARHGEF6 (ENSCLAG00000014229) #28 CD40LG (ENSCLAG00000002527) #29 VGLL1 (ENSCLAG00000002551) #30 HTATSF1 (ENSCLAG00000002718) #31 BRS3 (ENSCLAG00000003190) #32 ADGRG4 (ENSCLAG00000003090) #33 FHL1 (ENSCLAG00000002512) #36 SLC9A6 (ENSCLAG00000003196) MMGT1 (ENSCLAG00000002109) ENSCLAG00000002154 INTS6L (ENSCLAG00000002286) Degu MODERN SPECIES 151 DECR1 (ENSODEG00000003173) CALB1 (ENSODEG00000003248) KCNMB3 (ENSODEG00000003258) PIK3CA (ENSODEG00000003287) ZMAT3 (ENSODEG00000003313) KCNMB2 (ENSODEG00000003349) TBL1XR1 (ENSODEG00000003370) ENSODEG00000003408 ENSODEG00000003420 SOX3 (ENSODEG00000003426) ENSODEG00000003432 ENSODEG00000003458 ATP11C (ENSODEG00000003493) MCF2 (ENSODEG00000003577) F9 (ENSODEG00000003689) FGF13 (ENSODEG00000003799) #22 ENSODEG00000003824 ENSODEG00000003847 ENSODEG00000003878 ENSODEG00000005517 ENSODEG00000019174 ENSODEG00000019167 ENSODEG00000005534 ZIC3 (ENSODEG00000005556) #24 ENSODEG00000005580 ##27 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000038876 ENSHGLG00000049672 ENSHGLG00000036529 ENSHGLG00000037583 ENSHGLG00000004407 ENSHGLG00000039059 SOX3 (ENSHGLG00000039208) ENSHGLG00000047068 ATP11C (ENSHGLG00000007759) ENSHGLG00000009095 MCF2 (ENSHGLG00000013161) F9 (ENSHGLG00000050058) ENSHGLG00000034867 ENSHGLG00000034873 ENSHGLG00000033865 ENSHGLG00000007629 #22 ENSHGLG00000040882 #23 ENSHGLG00000046515 ENSHGLG00000010972 ENSHGLG00000041497 #24 ENSHGLG00000033794 GPR101 (ENSHGLG00000044397) #25 ENSHGLG00000011055 ##27 ARHGEF6 (ENSHGLG00000004195) #28 ENSHGLG00000045770 CD40LG (ENSHGLG00000046347) #29 VGLL1 (ENSHGLG00000037465) #30 HTATSF1 (ENSHGLG00000005328) #31 BRS3 (ENSHGLG00000018193) #32 ADGRG4 (ENSHGLG00000018882) #33 ENSHGLG00000007640 #35 Naked mole-rat female MODERN SPECIES 2 DCT (ENSHGLG00000001562) TGDS (ENSHGLG00000000360) GPR180 (ENSHGLG00000002152) ENSHGLG00000034930 ENSHGLG00000006878 ENSHGLG00000008312 ENSHGLG00000048406 ENSHGLG00000011718 ENSHGLG00000042681 CLDN10 (ENSHGLG00000001257) DZIP1 (ENSHGLG00000002976) DNAJC3 (ENSHGLG00000003951) UGGT2 (ENSHGLG00000001100) HS6ST3 (ENSHGLG00000003455) ENSHGLG00000047293 ENSHGLG00000034517 #22 OXGR1 (ENSHGLG00000000211) ENSHGLG00000035007 MBNL2 (ENSHGLG00000000575) ENSHGLG00000045309 ENSHGLG00000001769 ENSHGLG00000002267 ENSHGLG00000050845 ENSHGLG00000020479 SLC15A1 (ENSHGLG00000019478) ENSHGLG00000019500 ENSHGLG00000043020 ENSHGLG00000019518 ENSHGLG00000019531 ENSHGLG00000002656 ENSHGLG00000045833 Sciuridae ANCESTRAL SPECIES 27 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000162721 ENSGT00940000164798 ENSGT00940000162359 ENSGT00390000002886.b.b ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 ENSGT00390000016655.a.a.a.b Marmotini ANCESTRAL SPECIES 72 ENSGT00940000154972.gb.b.a ENSGT00940000154972.gb.a ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00960000192900 ENSGT00940000160971 ENSGT00700000106222 ENSGT00390000004226 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 ENSGT00390000016655.a.a.a.b Alpin marmot MODERN SPECIES 50 IDS (ENSMMMG00000012466) AFF2 (ENSMMMG00000012476) ENSMMMG00000012501 FMR1 (ENSMMMG00000012509) ENSMMMG00000012529 ENSMMMG00000012535 ENSMMMG00000012541 SLITRK2 (ENSMMMG00000012547) ENSMMMG00000012552 SLITRK4 (ENSMMMG00000012562) LDOC1 (ENSMMMG00000012582) ENSMMMG00000012587 ATP11C (ENSMMMG00000012599) ENSMMMG00000012728 F9 (ENSMMMG00000012745) FGF13 (ENSMMMG00000012768) #22 ENSMMMG00000012790 #23 ZIC3 (ENSMMMG00000012845) #24 GPR101 (ENSMMMG00000012861) #25 RBMX (ENSMMMG00000012892) #27 ARHGEF6 (ENSMMMG00000012910) #28 CD40LG (ENSMMMG00000012969) #29 VGLL1 (ENSMMMG00000013009) #30 HTATSF1 (ENSMMMG00000013019) #31 BRS3 (ENSMMMG00000013039) #32 ADGRG4 (ENSMMMG00000013042) #33 ENSMMMG00000013066 #35 FHL1 (ENSMMMG00000013081) #36 SLC9A6 (ENSMMMG00000013232) MMGT1 (ENSMMMG00000013293) ENSMMMG00000013303 Marmotini_b ANCESTRAL SPECIES 104 ENSGT00940000154972.gb.a ENSGT00940000158388 ENSGT00940000154972.gb.b.a ENSGT00940000161825 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00960000192900 ENSGT00940000160971 ENSGT00700000106222 ENSGT00940000158878 ENSGT00940000156974 ENSGT00940000159516 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #30 ENSGT00390000009902 #31 ENSGT01100000263512.b.b.b #32 ENSGT00940000162744 #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b ENSGT00510000047104 ENSGT00390000016655.a.a.a.b Squirrel MODERN SPECIES 113 IDS (ENSSTOG00000011740) AFF2 (ENSSTOG00000004799) FMR1 (ENSSTOG00000003260) SLITRK2 (ENSSTOG00000003070) ENSSTOG00000025269 SLITRK4 (ENSSTOG00000027854) LDOC1 (ENSSTOG00000019751) ATP11C (ENSSTOG00000010827) MCF2 (ENSSTOG00000029050) F9 (ENSSTOG00000010803) FGF13 (ENSSTOG00000013920) #22 ZIC3 (ENSSTOG00000024153) #24 GPR101 (ENSSTOG00000002026) #25 RBMX (ENSSTOG00000006211) #27 ARHGEF6 (ENSSTOG00000006178) #28 ENSSTOG00000033794 CD40LG (ENSSTOG00000006163) #29 VGLL1 (ENSSTOG00000012521) #30 HTATSF1 (ENSSTOG00000012505) #31 BRS3 (ENSSTOG00000012492) #32 ADGRG4 (ENSSTOG00000023630) #33 ENSSTOG00000008415 #35 FHL1 (ENSSTOG00000025661) #36 SLC9A6 (ENSSTOG00000025666) MMGT1 (ENSSTOG00000004796) INTS6L (ENSSTOG00000027054) Arctic ground squirrel MODERN SPECIES 98 LDOC1 (ENSUPAG00010012210) ENSUPAG00010012213 SOX3 (ENSUPAG00010012217) ENSUPAG00010012219 ENSUPAG00010012223 ENSUPAG00010012229 ENSUPAG00010012237 ATP11C (ENSUPAG00010012257) MCF2 (ENSUPAG00010012743) F9 (ENSUPAG00010012874) FGF13 (ENSUPAG00010012898) #22 ENSUPAG00010012907 #23 ENSUPAG00010012922 ZIC3 (ENSUPAG00010012933) #24 GPR101 (ENSUPAG00010012948) #25 RBMXL1 (ENSUPAG00010012952) ##27 ARHGEF6 (ENSUPAG00010012992) #28 ENSUPAG00010013170 CD40LG (ENSUPAG00010013175) #29 VGLL1 (ENSUPAG00010013182) #30 HTATSF1 (ENSUPAG00010013190) #31 BRS3 (ENSUPAG00010013205) #32 ADGRG4 (ENSUPAG00010013206) #33 ENSUPAG00010013231 #35 FHL1 (ENSUPAG00010013250) #36 SLC9A6 (ENSUPAG00010013369)