Euteleostomi ANCESTRAL SPECIES 20 ENSGT01090000260076.b.a ENSGT00940000160633 ENSGT00440000033895 ENSGT00390000013770 ENSGT00440000033329.b.a.b ENSGT00940000163031.b.b ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163347 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000156341 ENSGT00530000063174.a ENSGT01030000234935 ENSGT00950000182941.b.a #35 Sarcopterygii ANCESTRAL SPECIES 4 ENSGT00940000160515 ENSGT00940000153299 ENSGT00940000154344.a ENSGT00940000153669.b ENSGT00940000157029 ENSGT00730000111366 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163347 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Tetrapoda ANCESTRAL SPECIES 20 ENSGT00940000153669.b ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 Amniota ANCESTRAL SPECIES 24 ENSGT00940000153669.b ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 Mammalia ANCESTRAL SPECIES 44 ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Theria ANCESTRAL SPECIES 34 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000161825 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Eutheria ANCESTRAL SPECIES 16 ENSGT00940000161825 ENSGT00940000163633 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00910000146020 ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000156803 ENSGT00970000197053 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Glires ANCESTRAL SPECIES 10 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Rodentia ANCESTRAL SPECIES 10 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Rodentia_B ANCESTRAL SPECIES 16 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00700000106222 #13 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Myomorpha ANCESTRAL SPECIES 6 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Muroidea ANCESTRAL SPECIES 13 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00700000106222 #13 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00940000154972.fb #15 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Murinae ANCESTRAL SPECIES 14 ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00520000060073 #14 ENSGT00940000154972.fb #15 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Mus ANCESTRAL SPECIES 9 ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00520000060073 #14 ENSGT00940000154972.fb #15 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Shrew mouse MODERN SPECIES 23 MGP_PahariEiJ_G0031661 #7 Slitrk2 (MGP_PahariEiJ_G0031660) #8 4930447F04Rik (MGP_PahariEiJ_G0031659) #9 Ctag2 (MGP_PahariEiJ_G0031658) #10 Slitrk4 (MGP_PahariEiJ_G0031657) #11 Magea9 (MGP_PahariEiJ_G0031656) #12 Gm6760 (MGP_PahariEiJ_G0031655) #13 MGP_PahariEiJ_G0031654 #14 Magec2 (MGP_PahariEiJ_G0031653) #15 Ldoc1 (MGP_PahariEiJ_G0031652) #16 Sox3 (MGP_PahariEiJ_G0031651) #17 Gm7073 (MGP_PahariEiJ_G0031650) #18 Atp11c (MGP_PahariEiJ_G0031649) #19 MGP_PahariEiJ_G0031648 #20 F9 (MGP_PahariEiJ_G0031647) #21 Fgf13 (MGP_PahariEiJ_G0031646) #22 Magea13 (MGP_PahariEiJ_G0031645) #23 Zic3 (MGP_PahariEiJ_G0031644) #24 Gpr101 (MGP_PahariEiJ_G0031643) #25 MGP_PahariEiJ_G0031642 #26 Rbmx (MGP_PahariEiJ_G0031641) #27 Arhgef6 (MGP_PahariEiJ_G0031640) #28 Cd40lg (MGP_PahariEiJ_G0031639) #29 Zfx (MGP_PahariEiJ_G0031638) #30 Vgll1 (MGP_PahariEiJ_G0031637) #31 MGP_PahariEiJ_G0031636 #32 Brs3 (MGP_PahariEiJ_G0031635) #33 Adgrg4 (MGP_PahariEiJ_G0031634) #34 Map7d3 (MGP_PahariEiJ_G0031633) #35 Fhl1 (MGP_PahariEiJ_G0031632) #36 Slc9a6 (MGP_PahariEiJ_G0031631) #37 Mus_A ANCESTRAL SPECIES 15 ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00520000060073 #14 ENSGT00940000154972.fb #15 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Ryukyu mouse MODERN SPECIES 19 Slitrk2 (MGP_CAROLIEiJ_G0033119) #8 4930447F04Rik (MGP_CAROLIEiJ_G0033118) #9 Ctag2 (MGP_CAROLIEiJ_G0033117) #10 Slitrk4 (MGP_CAROLIEiJ_G0033116) #11 Magea9 (MGP_CAROLIEiJ_G0033115) #12 Gm6760 (MGP_CAROLIEiJ_G0033114) #13 MGP_CAROLIEiJ_G0033113 #14 Magec2 (MGP_CAROLIEiJ_G0033112) #15 Ldoc1 (MGP_CAROLIEiJ_G0033111) #16 MGP_CAROLIEiJ_G0033110 Sox3 (MGP_CAROLIEiJ_G0033109) #17 Gm7073 (MGP_CAROLIEiJ_G0033108) #18 Atp11c (MGP_CAROLIEiJ_G0033107) #19 Mcf2 (MGP_CAROLIEiJ_G0033106) #20 F9 (MGP_CAROLIEiJ_G0033105) #21 Fgf13 (MGP_CAROLIEiJ_G0033104) #22 Magea13 (MGP_CAROLIEiJ_G0033103) #23 MGP_CAROLIEiJ_G0033102 Zic3 (MGP_CAROLIEiJ_G0033101) #24 Gpr101 (MGP_CAROLIEiJ_G0033100) #25 Tm9sf5 (MGP_CAROLIEiJ_G0033099) #26 Rbmx (MGP_CAROLIEiJ_G0033098) #27 Arhgef6 (MGP_CAROLIEiJ_G0033097) #28 Cd40lg (MGP_CAROLIEiJ_G0033096) #29 MGP_CAROLIEiJ_G0033095 #31 Htatsf1 (MGP_CAROLIEiJ_G0033094) #32 Brs3 (MGP_CAROLIEiJ_G0033093) #33 Adgrg4 (MGP_CAROLIEiJ_G0033092) #34 Map7d3 (MGP_CAROLIEiJ_G0033091) #35 Fhl1 (MGP_CAROLIEiJ_G0033090) #36 Slc9a6 (MGP_CAROLIEiJ_G0033089) #37 Mus_B ANCESTRAL SPECIES 14 ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00520000060073 #14 ENSGT00940000154972.fb #15 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Mouse MODERN SPECIES 37 Gm1140 (ENSMUSG00000079578) #7 Slitrk2 (ENSMUSG00000036790) #8 4930447F04Rik (ENSMUSG00000031182) #9 Ctag2 (ENSMUSG00000031181) #10 Slitrk4 (ENSMUSG00000046699) #11 Magea9 (ENSMUSG00000031179) #12 Gm6760 (ENSMUSG00000079579) #13 Magec2 (ENSMUSG00000045330) #15 Ldoc1 (ENSMUSG00000057615) #16 Sox3 (ENSMUSG00000045179) #17 Gm715 (ENSMUSG00000082226) Gm7073 (ENSMUSG00000079583) #18 Atp11c (ENSMUSG00000062949) #19 Mcf2 (ENSMUSG00000031139) #20 F9 (ENSMUSG00000031138) #21 Fgf13 (ENSMUSG00000031137) #22 Magea13 (ENSMUSG00000046180) #23 Zic3 (ENSMUSG00000067860) #24 Gpr101 (ENSMUSG00000036357) #25 Tm9sf5 (ENSMUSG00000079584) #26 Rbmx (ENSMUSG00000031134) #27 Arhgef6 (ENSMUSG00000031133) #28 Cd40lg (ENSMUSG00000031132) #29 Vgll1 (ENSMUSG00000031131) #31 Htatsf1 (ENSMUSG00000067873) #32 Brs3 (ENSMUSG00000031130) #33 Adgrg4 (ENSMUSG00000053852) #34 Map7d3 (ENSMUSG00000067878) #35 Fhl1 (ENSMUSG00000023092) #36 Slc9a6 (ENSMUSG00000060681) #37 Mmgt1 (ENSMUSG00000061273) Mus_C ANCESTRAL SPECIES 27 ENSGT00390000000062.x.b.l.a #7 ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00520000060073 #14 ENSGT00940000154972.fb #15 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 spretus MODERN SPECIES 19 MGP_SPRETEiJ_G0034273 #7 Slitrk2 (MGP_SPRETEiJ_G0034272) #8 4930447F04Rik (MGP_SPRETEiJ_G0034271) #9 Ctag2 (MGP_SPRETEiJ_G0034270) #10 Slitrk4 (MGP_SPRETEiJ_G0034269) #11 Magea9 (MGP_SPRETEiJ_G0034268) #12 Gm6760 (MGP_SPRETEiJ_G0034267) #13 MGP_SPRETEiJ_G0034266 #14 Magec2 (MGP_SPRETEiJ_G0034265) #15 Ldoc1 (MGP_SPRETEiJ_G0034264) #16 Sox3 (MGP_SPRETEiJ_G0034263) #17 Gm7073 (MGP_SPRETEiJ_G0034262) #18 Atp11c (MGP_SPRETEiJ_G0034261) #19 Mcf2 (MGP_SPRETEiJ_G0034260) #20 F9 (MGP_SPRETEiJ_G0034259) #21 Fgf13 (MGP_SPRETEiJ_G0034258) #22 Magea13 (MGP_SPRETEiJ_G0034257) #23 Zic3 (MGP_SPRETEiJ_G0034256) #24 Gpr101 (MGP_SPRETEiJ_G0034255) #25 Tm9sf5 (MGP_SPRETEiJ_G0034254) #26 Rbmx (MGP_SPRETEiJ_G0034253) #27 Arhgef6 (MGP_SPRETEiJ_G0034252) #28 Cd40lg (MGP_SPRETEiJ_G0034251) #29 Vgll1 (MGP_SPRETEiJ_G0034250) #31 Htatsf1 (MGP_SPRETEiJ_G0034249) #32 Brs3 (MGP_SPRETEiJ_G0034248) #33 Adgrg4 (MGP_SPRETEiJ_G0034247) #34 Map7d3 (MGP_SPRETEiJ_G0034246) #35 Fhl1 (MGP_SPRETEiJ_G0034245) #36 Slc9a6 (MGP_SPRETEiJ_G0034244) #37 Mmgt1 (MGP_SPRETEiJ_G0034243) Steppe mouse MODERN SPECIES 2356 Fgf13 (ENSMSIG00000013334) #22 Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000000062.x.b.l.a #7 ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00940000154972.fb #15 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000183733 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Cricetidae_B ANCESTRAL SPECIES 28 ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00940000154972.fb #15 ENSGT00700000106038.A ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000183733 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Prairie vole MODERN SPECIES 360 Ctag2 (ENSMOCG00000017014) #10 ENSMOCG00000014952 ##7 Slitrk4 (ENSMOCG00000008180) #11 ENSMOCG00000017215 Magec2 (ENSMOCG00000016294) #15 ENSMOCG00000006967 Ldoc1 (ENSMOCG00000008324) #16 ENSMOCG00000013955 Sox3 (ENSMOCG00000009062) #17 Gm7073 (ENSMOCG00000018667) #18 ENSMOCG00000012975 Atp11c (ENSMOCG00000002605) #19 ENSMOCG00000007642 Mcf2 (ENSMOCG00000007145) #20 F9 (ENSMOCG00000010515) #21 Fgf13 (ENSMOCG00000000865) #22 Magea13 (ENSMOCG00000006923) #23 ENSMOCG00000002300 Zic3 (ENSMOCG00000020544) #24 Gpr101 (ENSMOCG00000019682) #25 Rbmx (ENSMOCG00000018048) #27 ENSMOCG00000012399 #28 Cd40lg (ENSMOCG00000007638) #29 ENSMOCG00000021293 ENSMOCG00000023007 #32 Brs3 (ENSMOCG00000021756) #33 ENSMOCG00000020722 #34 ENSMOCG00000013515 Map7d3 (ENSMOCG00000010703) #35 Fhl1 (ENSMOCG00000019051) #36 Slc9a6 (ENSMOCG00000017739) #37 Northern American deer mouse MODERN SPECIES 475 Magea9 (ENSPEMG00000024116) #12 Gm6760 (ENSPEMG00000013903) #13 ENSPEMG00000024166 ENSPEMG00000021044 Magec2 (ENSPEMG00000020864) #15 ENSPEMG00000026579 ENSPEMG00000031332 ENSPEMG00000024934 #16 ENSPEMG00000023481 ENSPEMG00000029307 Sox3 (ENSPEMG00000023890) #17 Gm715 (ENSPEMG00000025763) Atp11c (ENSPEMG00000023535) #19 Mcf2 (ENSPEMG00000001372) #20 F9 (ENSPEMG00000010184) #21 Fgf13 (ENSPEMG00000015509) #22 Magea13 (ENSPEMG00000023742) #23 Zic3 (ENSPEMG00000022168) #24 Gpr101 (ENSPEMG00000025689) #25 Tm9sf5 (ENSPEMG00000022942) #26 Rbmx (ENSPEMG00000029371) #27 Arhgef6 (ENSPEMG00000021523) #28 Cd40lg (ENSPEMG00000023170) #29 Vgll1 (ENSPEMG00000022343) #31 Htatsf1 (ENSPEMG00000022397) #32 Brs3 (ENSPEMG00000022868) #33 ENSPEMG00000022946 #34 Map7d3 (ENSPEMG00000021400) #35 Fhl1 (ENSPEMG00000022628) #36 Slc9a6 (ENSPEMG00000023480) #37 Mmgt1 (ENSPEMG00000029255) Cricetinae ANCESTRAL SPECIES 29 ENSGT00950000183189.a.b.b ENSGT00390000000062.x.b.l.a #7 ENSGT00940000161248 #8 ENSGT00860000136220 #9 ENSGT00410000025802.g.b.q.b #10 ENSGT00940000160971 #11 ENSGT00940000154972.eb.b.a.a #12 ENSGT00700000106222 #13 ENSGT00940000154972.fb #15 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000183733 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.a.a.b.j Chinese hamster chok1gshd MODERN SPECIES 16 ENSCGRG00001016997 Slitrk2 (ENSCGRG00001010877) #8 4930447F04Rik (ENSCGRG00001021811) #9 Ctag2 (ENSCGRG00001024950) #10 Slitrk4 (ENSCGRG00001005530) #11 Magea9 (ENSCGRG00001005254) #12 Gm6760 (ENSCGRG00001016891) #13 Magec2 (ENSCGRG00001021825) #15 Ldoc1 (ENSCGRG00001009400) #16 Sox3 (ENSCGRG00001011737) #17 Gm7073 (ENSCGRG00001022592) #18 Atp11c (ENSCGRG00001020356) #19 Mcf2 (ENSCGRG00001021302) #20 F9 (ENSCGRG00001015312) #21 ENSCGRG00001017965 Fgf13 (ENSCGRG00001014336) #22 Magea13 (ENSCGRG00001010626) #23 ENSCGRG00001018083 Zic3 (ENSCGRG00001024527) #24 Gpr101 (ENSCGRG00001012303) #25 Tm9sf5 (ENSCGRG00001002099) #26 Rbmx (ENSCGRG00001015786) #27 Arhgef6 (ENSCGRG00001012788) #28 Cd40lg (ENSCGRG00001020263) #29 Vgll1 (ENSCGRG00001001771) #31 Htatsf1 (ENSCGRG00001021602) #32 Brs3 (ENSCGRG00001000147) #33 ENSCGRG00001000280 #34 ENSCGRG00001022999 Fhl1 (ENSCGRG00001018833) #36 Slc9a6 (ENSCGRG00001008142) #37 Golden Hamster MODERN SPECIES 788 Fgf13 (ENSMAUG00000008666) #22 Magea13 (ENSMAUG00000019340) #23 Zic3 (ENSMAUG00000009402) #24 Gpr101 (ENSMAUG00000000743) #25 Tm9sf5 (ENSMAUG00000018307) #26 Rbmx (ENSMAUG00000019654) #27 ENSMAUG00000008083 #28 Cd40lg (ENSMAUG00000019910) #29 Vgll1 (ENSMAUG00000019769) #31 Htatsf1 (ENSMAUG00000007235) #32 Brs3 (ENSMAUG00000019309) #33 ENSMAUG00000011586 #34 ENSMAUG00000000915 Map7d3 (ENSMAUG00000000471) #35 Fhl1 (ENSMAUG00000014161) #36 ENSMAUG00000019556 Upper Galilee mountains blind mole rat MODERN SPECIES 1779 Slitrk4 (ENSNGAG00000003850) #11 Ldoc1 (ENSNGAG00000001475) #16 Atp11c (ENSNGAG00000000607) #19 Mcf2 (ENSNGAG00000014425) #20 F9 (ENSNGAG00000013959) #21 Fgf13 (ENSNGAG00000012709) #22 Zic3 (ENSNGAG00000023346) #24 Lesser Egyptian jerboa MODERN SPECIES 53 Pomt1 (ENSJJAG00000019337) ENSJJAG00000009295 Plpp7 (ENSJJAG00000023043) Fam78a (ENSJJAG00000010847) ENSJJAG00000011735 ENSJJAG00000022526 Slitrk4 (ENSJJAG00000014216) #11 Ldoc1 (ENSJJAG00000010596) #16 Sox3 (ENSJJAG00000012521) #17 ENSJJAG00000000576 Atp11c (ENSJJAG00000005439) #19 Mcf2 (ENSJJAG00000018143) #20 F9 (ENSJJAG00000023266) #21 ENSJJAG00000010816 ENSJJAG00000018813 Fgf13 (ENSJJAG00000016169) #22 Magea13 (ENSJJAG00000010090) #23 ENSJJAG00000010694 ENSJJAG00000020542 Zic3 (ENSJJAG00000022714) #24 Gpr101 (ENSJJAG00000022761) #25 ENSJJAG00000013266 Rbmx (ENSJJAG00000023855) #27 ENSJJAG00000011211 ENSJJAG00000010302 #28 Cd40lg (ENSJJAG00000022579) #29 ENSJJAG00000014597 #32 Brs3 (ENSJJAG00000017913) #33 Adgrg4 (ENSJJAG00000009866) #34 Fhl1 (ENSJJAG00000022369) #36 Slc9a6 (ENSJJAG00000014615) #37 Kangaroo rat MODERN SPECIES 408 Ids (ENSDORG00000026027) Aff2 (ENSDORG00000015215) Fmr1 (ENSDORG00000012501) Slitrk2 (ENSDORG00000000545) #8 ENSDORG00000005920 Slitrk4 (ENSDORG00000001489) #11 ENSDORG00000026987 Ldoc1 (ENSDORG00000011028) #16 Sox3 (ENSDORG00000027035) #17 ENSDORG00000027706 ENSDORG00000027206 ENSDORG00000026314 Atp11c (ENSDORG00000003661) #19 Mcf2 (ENSDORG00000006306) #20 F9 (ENSDORG00000003933) #21 Fgf13 (ENSDORG00000023968) #22 Zic3 (ENSDORG00000025481) #24 Gpr101 (ENSDORG00000011583) #25 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.a.a.b Hystricomorpha ANCESTRAL SPECIES 57 ENSGT00940000162864.d #23 ENSGT00940000154972 #12 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104.gb.a Hystricomorpha_a ANCESTRAL SPECIES 80 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104.gb.a ENSGT00390000016655.a.a.a.b Hystricomorpha_b ANCESTRAL SPECIES 115 ENSGT00940000162359 #17 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104.gb.a ENSGT00390000016655.a.a.a.b ENSGT00390000016655.a.b Long-tailed chinchilla MODERN SPECIES 196 ENSCLAG00000017550 UTP25 (ENSCLAG00000004405) IRF6 (ENSCLAG00000003528) C1orf74 (ENSCLAG00000004768) TRAF3IP3 (ENSCLAG00000004809) HSD11B1 (ENSCLAG00000001865) ENSCLAG00000017530 LAMB3 (ENSCLAG00000002447) CAMK1G (ENSCLAG00000002854) PLXNA2 (ENSCLAG00000002998) SOX3 (ENSCLAG00000003169) #17 ENSCLAG00000003218 #18 ATP11C (ENSCLAG00000005103) #19 MCF2 (ENSCLAG00000005765) #20 F9 (ENSCLAG00000006998) #21 FGF13 (ENSCLAG00000001764) #22 ZIC3 (ENSCLAG00000001934) #24 GPR101 (ENSCLAG00000002046) #25 RBMXL1 (ENSCLAG00000002258) ##27 ARHGEF6 (ENSCLAG00000014229) #28 CD40LG (ENSCLAG00000002527) #29 VGLL1 (ENSCLAG00000002551) #31 HTATSF1 (ENSCLAG00000002718) #32 BRS3 (ENSCLAG00000003190) #33 ADGRG4 (ENSCLAG00000003090) #34 FHL1 (ENSCLAG00000002512) #36 SLC9A6 (ENSCLAG00000003196) #37 MMGT1 (ENSCLAG00000002109) ENSCLAG00000002154 INTS6L (ENSCLAG00000002286) Degu MODERN SPECIES 151 DECR1 (ENSODEG00000003173) CALB1 (ENSODEG00000003248) KCNMB3 (ENSODEG00000003258) PIK3CA (ENSODEG00000003287) ZMAT3 (ENSODEG00000003313) KCNMB2 (ENSODEG00000003349) TBL1XR1 (ENSODEG00000003370) ENSODEG00000003408 ENSODEG00000003420 SOX3 (ENSODEG00000003426) #17 ENSODEG00000003432 ENSODEG00000003458 ATP11C (ENSODEG00000003493) #19 MCF2 (ENSODEG00000003577) #20 F9 (ENSODEG00000003689) #21 FGF13 (ENSODEG00000003799) #22 ENSODEG00000003824 ENSODEG00000003847 ENSODEG00000003878 ENSODEG00000005517 ENSODEG00000019174 ENSODEG00000019167 ENSODEG00000005534 ZIC3 (ENSODEG00000005556) #24 ENSODEG00000005580 ##27 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000038876 #11 ENSHGLG00000049672 ENSHGLG00000036529 #12 ENSHGLG00000037583 #16 ENSHGLG00000004407 ENSHGLG00000039059 SOX3 (ENSHGLG00000039208) #17 ENSHGLG00000047068 ATP11C (ENSHGLG00000007759) #19 ENSHGLG00000009095 MCF2 (ENSHGLG00000013161) #20 F9 (ENSHGLG00000050058) #21 ENSHGLG00000034867 ENSHGLG00000034873 ENSHGLG00000033865 ENSHGLG00000007629 #22 ENSHGLG00000040882 #23 ENSHGLG00000046515 ENSHGLG00000010972 ENSHGLG00000041497 #24 ENSHGLG00000033794 GPR101 (ENSHGLG00000044397) #25 ENSHGLG00000011055 ##27 ARHGEF6 (ENSHGLG00000004195) #28 ENSHGLG00000045770 CD40LG (ENSHGLG00000046347) #29 VGLL1 (ENSHGLG00000037465) #31 HTATSF1 (ENSHGLG00000005328) #32 BRS3 (ENSHGLG00000018193) #33 ADGRG4 (ENSHGLG00000018882) #34 ENSHGLG00000007640 #35 Naked mole-rat female MODERN SPECIES 2 DCT (ENSHGLG00000001562) TGDS (ENSHGLG00000000360) GPR180 (ENSHGLG00000002152) ENSHGLG00000034930 ENSHGLG00000006878 ENSHGLG00000008312 ENSHGLG00000048406 ENSHGLG00000011718 ENSHGLG00000042681 CLDN10 (ENSHGLG00000001257) DZIP1 (ENSHGLG00000002976) DNAJC3 (ENSHGLG00000003951) UGGT2 (ENSHGLG00000001100) HS6ST3 (ENSHGLG00000003455) ENSHGLG00000047293 ENSHGLG00000034517 #22 OXGR1 (ENSHGLG00000000211) ENSHGLG00000035007 MBNL2 (ENSHGLG00000000575) ENSHGLG00000045309 ENSHGLG00000001769 ENSHGLG00000002267 ENSHGLG00000050845 ENSHGLG00000020479 SLC15A1 (ENSHGLG00000019478) ENSHGLG00000019500 ENSHGLG00000043020 ENSHGLG00000019518 ENSHGLG00000019531 ENSHGLG00000002656 ENSHGLG00000045833 Sciuridae ANCESTRAL SPECIES 27 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.a.a.b Marmotini ANCESTRAL SPECIES 72 ENSGT00940000154972.gb.b.a #12 ENSGT00940000154972.gb.a #12 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00960000192900 ENSGT00940000160971 #11 ENSGT00700000106222 #13 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.a.a.b Alpin marmot MODERN SPECIES 50 IDS (ENSMMMG00000012466) AFF2 (ENSMMMG00000012476) ENSMMMG00000012501 FMR1 (ENSMMMG00000012509) ENSMMMG00000012529 ENSMMMG00000012535 ENSMMMG00000012541 SLITRK2 (ENSMMMG00000012547) #8 ENSMMMG00000012552 SLITRK4 (ENSMMMG00000012562) #11 LDOC1 (ENSMMMG00000012582) #16 ENSMMMG00000012587 #18 ATP11C (ENSMMMG00000012599) #19 ENSMMMG00000012728 #20 F9 (ENSMMMG00000012745) #21 FGF13 (ENSMMMG00000012768) #22 ENSMMMG00000012790 #23 ZIC3 (ENSMMMG00000012845) #24 GPR101 (ENSMMMG00000012861) #25 RBMX (ENSMMMG00000012892) #27 ARHGEF6 (ENSMMMG00000012910) #28 CD40LG (ENSMMMG00000012969) #29 VGLL1 (ENSMMMG00000013009) #31 HTATSF1 (ENSMMMG00000013019) #32 BRS3 (ENSMMMG00000013039) #33 ADGRG4 (ENSMMMG00000013042) #34 ENSMMMG00000013066 #35 FHL1 (ENSMMMG00000013081) #36 SLC9A6 (ENSMMMG00000013232) #37 MMGT1 (ENSMMMG00000013293) ENSMMMG00000013303 Marmotini_b ANCESTRAL SPECIES 104 ENSGT00940000154972.gb.a #12 ENSGT00940000158388 ENSGT00940000154972.gb.b.a #12 ENSGT00940000161825 ENSGT00390000012182 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00960000192900 ENSGT00940000160971 #11 ENSGT00700000106222 #13 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.c #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.a.a.b Squirrel MODERN SPECIES 113 IDS (ENSSTOG00000011740) AFF2 (ENSSTOG00000004799) FMR1 (ENSSTOG00000003260) SLITRK2 (ENSSTOG00000003070) #8 ENSSTOG00000025269 SLITRK4 (ENSSTOG00000027854) #11 LDOC1 (ENSSTOG00000019751) #16 ATP11C (ENSSTOG00000010827) #19 MCF2 (ENSSTOG00000029050) #20 F9 (ENSSTOG00000010803) #21 FGF13 (ENSSTOG00000013920) #22 ZIC3 (ENSSTOG00000024153) #24 GPR101 (ENSSTOG00000002026) #25 RBMX (ENSSTOG00000006211) #27 ARHGEF6 (ENSSTOG00000006178) #28 ENSSTOG00000033794 CD40LG (ENSSTOG00000006163) #29 VGLL1 (ENSSTOG00000012521) #31 HTATSF1 (ENSSTOG00000012505) #32 BRS3 (ENSSTOG00000012492) #33 ADGRG4 (ENSSTOG00000023630) #34 ENSSTOG00000008415 #35 FHL1 (ENSSTOG00000025661) #36 SLC9A6 (ENSSTOG00000025666) #37 MMGT1 (ENSSTOG00000004796) INTS6L (ENSSTOG00000027054) Arctic ground squirrel MODERN SPECIES 98 LDOC1 (ENSUPAG00010012210) #16 ENSUPAG00010012213 SOX3 (ENSUPAG00010012217) #17 ENSUPAG00010012219 ENSUPAG00010012223 ENSUPAG00010012229 #18 ENSUPAG00010012237 ATP11C (ENSUPAG00010012257) #19 MCF2 (ENSUPAG00010012743) #20 F9 (ENSUPAG00010012874) #21 FGF13 (ENSUPAG00010012898) #22 ENSUPAG00010012907 #23 ENSUPAG00010012922 ZIC3 (ENSUPAG00010012933) #24 GPR101 (ENSUPAG00010012948) #25 RBMXL1 (ENSUPAG00010012952) ##27 ARHGEF6 (ENSUPAG00010012992) #28 ENSUPAG00010013170 CD40LG (ENSUPAG00010013175) #29 VGLL1 (ENSUPAG00010013182) #31 HTATSF1 (ENSUPAG00010013190) #32 BRS3 (ENSUPAG00010013205) #33 ADGRG4 (ENSUPAG00010013206) #34 ENSUPAG00010013231 #35 FHL1 (ENSUPAG00010013250) #36 SLC9A6 (ENSUPAG00010013369) #37 Lagomorpha ANCESTRAL SPECIES ENSGT00940000162313 #22 Pika MODERN SPECIES 1005 ENSOPRG00000011441 #22 Primates ANCESTRAL SPECIES 65 ENSGT00940000162313 #22 ENSGT00940000162864 #23 Haplorrhini ANCESTRAL SPECIES ENSGT00940000162313 #22 Simiiformes ANCESTRAL SPECIES ENSGT00940000162313 #22 Catarrhini ANCESTRAL SPECIES ENSGT00940000162313 #22 Hominoidea ANCESTRAL SPECIES 29 ENSGT00940000160971 #11 ENSGT00940000163956.c ENSGT00940000165112 ENSGT00940000164535.a ENSGT00940000164535.b ENSGT00940000164981 ENSGT00940000162721 #16 ENSGT01010000223978 ENSGT00390000013647 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000153500.a.a.k.a.b.c ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000165003 ENSGT01000000214719 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00940000153476.b.m.b ENSGT00950000182941.b.a #35 Hominidae ANCESTRAL SPECIES 8 ENSGT00940000160971 #11 ENSGT00940000163956.c ENSGT00940000165112 ENSGT00940000164535.a ENSGT00940000164535.b ENSGT00940000164981 ENSGT00910000146818 ENSGT01010000223978 ENSGT00390000013647 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000153500.a.a.k.a.b.c ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00940000153476.b.m.b ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00910000147399 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000160971 #11 ENSGT00940000163956.c ENSGT00940000165112 ENSGT00940000164535.a ENSGT00940000164535.b ENSGT00940000164981 ENSGT00910000146818 ENSGT01010000223978 ENSGT00390000013647 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000153500.a.a.k.a.b.c ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000165003 ENSGT01000000214719 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00940000153476.b.m.b ENSGT00950000182941.b.a #35 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00940000163956.d ENSGT00940000160971 #11 ENSGT00940000163956.c ENSGT00940000165112 ENSGT00940000164535.a ENSGT00940000164535.b ENSGT00940000164981 ENSGT00910000146818 ENSGT00730000111796 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000153500.a.a.k.a.b.c ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000165003 ENSGT01000000214719 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00940000153476.b.m.b ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 Pan ANCESTRAL SPECIES 6 ENSGT00940000165112 ENSGT00940000164535.a ENSGT00940000164535.b ENSGT00940000164981 ENSGT00910000146818 ENSGT00730000111796 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00940000153147.m.a.a.a.a.b.a.a.a ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00910000148205 ENSGT00950000183029.B.c.b.b.a.d ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000153500.a.a.k.a.b.c ENSGT00940000162539 #25 ENSGT00940000165733 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000165003 ENSGT01000000214719 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00940000153476.b.m.b ENSGT00950000182941.b.a #35 Bonobo MODERN SPECIES 369 SPANXN3 (ENSPPAG00000038428) ENSPPAG00000036672 MAGEC2 (ENSPPAG00000026474) ENSPPAG00000026388 ENSPPAG00000030721 ENSPPAG00000026521 ENSPPAG00000025131 ENSPPAG00000023819 ENSPPAG00000037228 CXorf66 (ENSPPAG00000038036) #18 ATP11C (ENSPPAG00000043527) #19 MCF2 (ENSPPAG00000034608) #20 F9 (ENSPPAG00000039904) #21 ENSPPAG00000037956 ENSPPAG00000028602 FGF13 (ENSPPAG00000035766) #22 ZIC3 (ENSPPAG00000030013) #24 ENSPPAG00000037272 GPR101 (ENSPPAG00000016837) #25 ENSPPAG00000036722 RBMX (ENSPPAG00000028409) #27 ENSPPAG00000022910 ENSPPAG00000034899 ARHGEF6 (ENSPPAG00000028700) #28 CD40LG (ENSPPAG00000042603) #29 VGLL1 (ENSPPAG00000035917) #31 HTATSF1 (ENSPPAG00000024268) #32 BRS3 (ENSPPAG00000031235) #33 ADGRG4 (ENSPPAG00000040242) #34 ENSPPAG00000025451 MAP7D3 (ENSPPAG00000033016) #35 Human MODERN SPECIES 1827 MAGEC2 (ENSG00000046774) MAGEC1 (ENSG00000155495) MAGEC3 (ENSG00000165509) SPANXD (ENSG00000196406) SPANXA2 (ENSG00000203926) SPANXA1 (ENSG00000198021) SPANXC (ENSG00000198573) LDOC1 (ENSG00000182195) #16 SPANXB1 (ENSG00000227234) SOX3 (ENSG00000134595) #17 ENSG00000230707 CXorf66 (ENSG00000203933) #18 ATP11C (ENSG00000101974) #19 MCF2 (ENSG00000101977) #20 F9 (ENSG00000101981) #21 FGF13 (ENSG00000129682) #22 ZIC3 (ENSG00000156925) #24 GPR101 (ENSG00000165370) #25 RBMX (ENSG00000147274) #27 ARHGEF6 (ENSG00000129675) #28 CD40LG (ENSG00000102245) #29 VGLL1 (ENSG00000102243) #31 HTATSF1 (ENSG00000102241) #32 BRS3 (ENSG00000102239) #33 ADGRG4 (ENSG00000156920) #34 MAP7D3 (ENSG00000129680) #35 FHL1 (ENSG00000022267) #36 SLC9A6 (ENSG00000198689) #37 MMGT1 (ENSG00000169446) SAGE1 (ENSG00000181433) CT45A10 (ENSG00000269586) Cercopithecidae ANCESTRAL SPECIES ENSGT00940000162313 #22 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000162313 #22 Golden snub-nosed monkey MODERN SPECIES 3054 FGF13 (ENSRROG00000039580) #22 Black snub-nosed monkey MODERN SPECIES 1835 FGF13 (ENSRBIG00000035787) #22 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000162313 #22 ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000162313 #22 ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000160022 ENSGT00940000156074 ENSGT00940000157059 ENSGT00940000157103 ENSGT00940000156728 ENSGT00390000018121 ENSGT00900000143503 ENSGT00940000154245.B ENSGT00940000159024 ENSGT00390000012178.h ENSGT00940000157266 ENSGT00940000160193 ENSGT00390000014316.c.a ENSGT00550000074940 ENSGT00390000014293.a ENSGT00940000162313 #22 ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.k.a.a ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 ENSGT00390000013159 Cercopithecinae_d ANCESTRAL SPECIES 62 ENSGT00940000160193 ENSGT00390000014316.c.a ENSGT00550000074940 ENSGT00390000014293.a ENSGT00940000162313 #22 ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00940000163645 ENSGT00910000146913 ENSGT00940000155234.b.k.a.a ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 ENSGT00390000013159 Sooty mangabey MODERN SPECIES 348 GABRG1 (ENSCATG00000043822) GNPDA2 (ENSCATG00000034581) GUF1 (ENSCATG00000040932) RAP1GDS1 (ENSCATG00000023952) ENSCATG00000043985 #22 TSPAN5 (ENSCATG00000040343) EIF4E (ENSCATG00000037138) METAP1 (ENSCATG00000038797) ADH5 (ENSCATG00000043644) ADH4 (ENSCATG00000037962) ADH6 (ENSCATG00000033505) ENSCATG00000040845 ADH1A (ENSCATG00000036045) ADH7 (ENSCATG00000040095) C4orf17 (ENSCATG00000007938) ENSCATG00000031003 MTTP (ENSCATG00000034810) C4orf54 (ENSCATG00000045211) DAPP1 (ENSCATG00000039739) LAMTOR3 (ENSCATG00000037771) Drill MODERN SPECIES 1529 GNPDA2 (ENSMLEG00000036479) GUF1 (ENSMLEG00000033225) RAP1GDS1 (ENSMLEG00000027721) ENSMLEG00000038655 #22 TSPAN5 (ENSMLEG00000040517) APOF (ENSMLEG00000041243) STAT2 (ENSMLEG00000011483) IL23A (ENSMLEG00000016985) PAN2 (ENSMLEG00000037388) CNPY2 (ENSMLEG00000028786) CS (ENSMLEG00000015463) COQ10A (ENSMLEG00000031831) ANKRD52 (ENSMLEG00000030021) SLC39A5 (ENSMLEG00000043323) NABP2 (ENSMLEG00000042811) ADD2 (ENSMLEG00000039648) TGFA (ENSMLEG00000032348) Macaca ANCESTRAL SPECIES 18 ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000162313 #22 ENSGT00940000161376 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a.c ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 ENSGT00940000155234.b.k.a.a ENSGT00940000155234.b.k.a.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Pig-tailed macaque MODERN SPECIES 126 STPG2 (ENSMNEG00000044221) RAP1GDS1 (ENSMNEG00000032772) ENSMNEG00000036581 #22 TSPAN5 (ENSMNEG00000041179) ENSMNEG00000013566 METAP1 (ENSMNEG00000036157) ENSMNEG00000029974 ADH4 (ENSMNEG00000039108) ENSMNEG00000038839 ADH6 (ENSMNEG00000035946) ADH1A (ENSMNEG00000024750) ADH7 (ENSMNEG00000033055) C4orf17 (ENSMNEG00000035254) TRMT10A (ENSMNEG00000044321) MTTP (ENSMNEG00000033442) C4orf54 (ENSMNEG00000036400) DAPP1 (ENSMNEG00000045303) LAMTOR3 (ENSMNEG00000033312) Vervet Monkey MODERN SPECIES 26 MMRN1 (ENSCSAG00000004223) ENSCSAG00000004217 ENSCSAG00000004212 ENSCSAG00000004207 ENSCSAG00000004205 ENSCSAG00000004203 ATOH1 (ENSCSAG00000000408) SMARCAD1 (ENSCSAG00000004186) HPGDS (ENSCSAG00000004182) PDLIM5 (ENSCSAG00000004173) BMPR1B (ENSCSAG00000004147) UNC5C (ENSCSAG00000004138) PDHA2 (ENSCSAG00000000407) STPG2 (ENSCSAG00000004134) RAP1GDS1 (ENSCSAG00000004128) ENSCSAG00000000406 #22 TSPAN5 (ENSCSAG00000004123) EIF4E (ENSCSAG00000004122) METAP1 (ENSCSAG00000004120) ADH5 (ENSCSAG00000004118) ADH4 (ENSCSAG00000004116) ADH6 (ENSCSAG00000004112) ADH1B (ENSCSAG00000004110) ADH7 (ENSCSAG00000004106) C4orf17 (ENSCSAG00000004103) TRMT10A (ENSCSAG00000004098) MTTP (ENSCSAG00000004095) C4orf54 (ENSCSAG00000000405) DAPP1 (ENSCSAG00000004090) DNAJB14 (ENSCSAG00000004085) ENSCSAG00000000404 Tarsier MODERN SPECIES 2733 FGF13 (ENSTSYG00000006047) #22 Strepsirrhini ANCESTRAL SPECIES 109 ENSGT00940000162313 #22 ENSGT00940000162864 #23 Bushbaby MODERN SPECIES 232 SOX3 (ENSOGAG00000025781) #17 ENSOGAG00000034324 ENSOGAG00000028331 ENSOGAG00000031982 ENSOGAG00000034439 ENSOGAG00000030168 ENSOGAG00000033659 ENSOGAG00000029856 ENSOGAG00000015306 #18 ATP11C (ENSOGAG00000002088) #19 MCF2 (ENSOGAG00000000864) #20 F9 (ENSOGAG00000000863) #21 ENSOGAG00000028887 ENSOGAG00000029354 ENSOGAG00000030480 FGF13 (ENSOGAG00000031744) #22 ENSOGAG00000027112 #23 ENSOGAG00000025744 ZIC3 (ENSOGAG00000011700) #24 GPR101 (ENSOGAG00000006478) #25 ENSOGAG00000032990 #26 Laurasiatheria ANCESTRAL SPECIES 26 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00910000146020 ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000162864.a #23 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT01020000231229 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000162864.a #23 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT01020000231229 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000162864.a #23 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT01020000231229 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 Camelidae ANCESTRAL SPECIES 51 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Alpaca MODERN SPECIES 311 MCF2 (ENSVPAG00000009718) #20 F9 (ENSVPAG00000009716) #21 ENSVPAG00000009715 #22 Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000162864.a #23 ENSGT00950000183087.A.b.a ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT01020000231229 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Pecora ANCESTRAL SPECIES 28 ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000162864.a.d.a #23 ENSGT00940000160971 #11 ENSGT00390000004226.b.a #18 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226.a #18 ENSGT00390000004226.b.b #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Percora_a ANCESTRAL SPECIES 30 ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000162864.a.d.a #23 ENSGT00940000160971 #11 ENSGT00390000004226.b.a #18 ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226.a #18 ENSGT00390000004226.b.b #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.p #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Bovidae ANCESTRAL SPECIES 29 ENSGT00940000161248 #8 ENSGT01030000234964.A.a.b ENSGT00390000004226.b.b #18 ENSGT00390000004226.a #18 ENSGT00390000002886.b.b ENSGT00940000162359 #17 ENSGT00940000162721 #16 ENSGT00390000004226.b.a #18 ENSGT01030000234964.A.a.a ENSGT00940000162864.a.c #23 ENSGT00950000183087.A.b.a ENSGT00940000160971 #11 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.p #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104.pb.b ENSGT00390000016655.a.b Bovinae ANCESTRAL SPECIES 42 ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT01030000234964.A.a.b ENSGT00390000004226.b.a #18 ENSGT01030000234964.A.a.a ENSGT00940000162864.a.c #23 ENSGT00950000183087.A.b.a ENSGT00940000160971 #11 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.p #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104.pb.b ENSGT00390000016655.a.b Bos ANCESTRAL SPECIES 36 ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT01030000234964.A.a.b ENSGT01030000234964.A.a.a.d ENSGT00940000162864.a.c #23 ENSGT00950000183087.A.b.a ENSGT00940000160971 #11 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00390000010165.i.b.a.b ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.p #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT01100000263480.a.a.a.a.a.a.b.b.b ENSGT00940000153460.c.b.j #37 ENSGT00510000047104.pb.b Bos_b ANCESTRAL SPECIES 31 ENSGT00940000162864.a.c #23 ENSGT00950000183087.A.b.a ENSGT00940000160971 #11 ENSGT00910000144363.g.b.a.a.a ENSGT00940000162721 #16 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226.a.a.b #18 ENSGT00390000004226.a.a.a.a #18 ENSGT00390000004226.a.b.a #18 ENSGT00940000160625.k.b ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00390000010165.i.b.a.b ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.p #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a.b #35 ENSGT00940000154833 #36 ENSGT01100000263480.a.a.a.a.a.a.b.b.b ENSGT00940000153460.c.b.j #37 ENSGT00510000047104.pb.b ENSGT00390000016655.a.b ENSGT00940000157318.h.b.a.b Cow MODERN SPECIES 174 ENSBTAG00000051652 #23 ENSBTAG00000054414 #11 ENSBTAG00000052553 SOX3 (ENSBTAG00000049481) #17 ENSBTAG00000014397 CXHXorf66 (ENSBTAG00000049080) #18 ENSBTAG00000049553 #18 ENSBTAG00000048333 #18 ENSBTAG00000051112 ENSBTAG00000050922 ENSBTAG00000054134 #19 ENSBTAG00000049774 #20 F9 (ENSBTAG00000004003) #21 ENSBTAG00000052373 FGF13 (ENSBTAG00000020194) #22 MAGEA11 (ENSBTAG00000018323) #23 ZIC3 (ENSBTAG00000021413) #24 TM9SF5 (ENSBTAG00000054951) #26 RBMX (ENSBTAG00000013308) ##27 ENSBTAG00000054684 #28 CD40LG (ENSBTAG00000051078) #29 VGLL1 (ENSBTAG00000001880) #31 HTATSF1 (ENSBTAG00000055212) #32 ENSBTAG00000054559 #33 ENSBTAG00000051318 #35 FHL1 (ENSBTAG00000018513) #36 SLC9A6 (ENSBTAG00000009523) #37 MMGT1 (ENSBTAG00000025297) INTS6L (ENSBTAG00000008993) Bos_a ANCESTRAL SPECIES ENSGT00940000162313 #22 Domestic yak MODERN SPECIES 69 ENSBGRG00000012699 SLITRK4 (ENSBGRG00000012800) #11 ENSBGRG00000012828 ENSBGRG00000012864 #18 ENSBGRG00000012915 LDOC1 (ENSBGRG00000012930) #16 ENSBGRG00000013037 SOX3 (ENSBGRG00000013074) #17 ENSBGRG00000013322 ENSBGRG00000013335 #18 ENSBGRG00000013390 #18 ENSBGRG00000013454 ATP11C (ENSBGRG00000013594) #19 MCF2 (ENSBGRG00000016309) #20 F9 (ENSBGRG00000017397) #21 FGF13 (ENSBGRG00000017651) #22 ENSBGRG00000017892 ENSBGRG00000017943 ENSBGRG00000017990 #23 ENSBGRG00000018033 ZIC3 (ENSBGRG00000018094) #24 ENSBGRG00000018234 #26 GPR101 (ENSBGRG00000018481) #25 RBMXL1 (ENSBGRG00000018516) ##27 ARHGEF6 (ENSBGRG00000018751) #28 CD40LG (ENSBGRG00000019129) #29 ENSBGRG00000019321 #31 HTATSF1 (ENSBGRG00000019364) #32 BRS3 (ENSBGRG00000019515) #33 ENSBGRG00000019586 #35 ENSBGRG00000020148 #36 Caprinae ANCESTRAL SPECIES 44 ENSGT00940000162864.a.c #23 ENSGT01030000234964.A.a.a ENSGT00390000004226.b.a #18 ENSGT00940000162721 #16 ENSGT01010000223978 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226.a #18 ENSGT00390000004226.b.b #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00390000005569.x.a.a.a.a.b.h ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00940000154268.e.b.b.a.a ENSGT00390000009902.o #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Goat MODERN SPECIES 30 ENSCHIG00000020888 ENSCHIG00000024386 IGSF1 (ENSCHIG00000008777) ENSCHIG00000000062 SLITRK4 (ENSCHIG00000019228) #11 ENSCHIG00000018613 ENSCHIG00000000195 ENSCHIG00000000231 #18 LDOC1 (ENSCHIG00000019266) #16 ENSCHIG00000000337 SOX3 (ENSCHIG00000000368) #17 ENSCHIG00000000404 ATP11C (ENSCHIG00000009648) #19 MCF2 (ENSCHIG00000009737) #20 F9 (ENSCHIG00000013903) #21 FGF13 (ENSCHIG00000016286) #22 ENSCHIG00000018935 ZIC3 (ENSCHIG00000021756) #24 ENSCHIG00000007648 ENSCHIG00000009593 #26 ENSCHIG00000000060 ENSCHIG00000000095 ARHGEF6 (ENSCHIG00000000132) #28 CD40LG (ENSCHIG00000000168) #29 ENSCHIG00000018808 ENSCHIG00000000243 #31 BRS3 (ENSCHIG00000000280) #33 HTATSF1 (ENSCHIG00000000312) #32 ENSCHIG00000000348 #35 ENSCHIG00000000379 MOSPD1 (ENSCHIG00000000414) Cetacea ANCESTRAL SPECIES ENSGT00940000162313 #22 Odontoceti ANCESTRAL SPECIES ENSGT00940000162313 #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000162313 #22 Odontoceti_b ANCESTRAL SPECIES 52 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 Monodontidae ANCESTRAL SPECIES 19 ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00950000183087.A.b.a.e ENSGT00940000160971 #11 ENSGT00950000183375 ENSGT00940000164798 ENSGT01020000231229 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00530000064050.j ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.k #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00390000014547.d.a.b Beluga whale MODERN SPECIES FMR1 (ENSDLEG00000000712) SLITRK2 (ENSDLEG00000000769) #8 ENSDLEG00000000774 SLITRK4 (ENSDLEG00000000783) #11 LDOC1 (ENSDLEG00000000802) #16 ENSDLEG00000000805 ENSDLEG00000000818 ENSDLEG00000000822 SOX3 (ENSDLEG00000000843) #17 ENSDLEG00000000855 ATP11C (ENSDLEG00000000892) #19 ENSDLEG00000001046 MCF2 (ENSDLEG00000001070) #20 F9 (ENSDLEG00000001177) #21 ENSDLEG00000001192 FGF13 (ENSDLEG00000001212) #22 ENSDLEG00000001240 #23 ZIC3 (ENSDLEG00000001271) #24 GPR101 (ENSDLEG00000001280) #25 GPR101 (ENSDLEG00000001283) #25 RBMX (ENSDLEG00000001291) #27 ARHGEF6 (ENSDLEG00000001336) #28 CD40LG (ENSDLEG00000001439) #29 VGLL1 (ENSDLEG00000001448) #31 HTATSF1 (ENSDLEG00000001466) #32 BRS3 (ENSDLEG00000001472) #33 MAP7D3 (ENSDLEG00000001486) #35 FHL1 (ENSDLEG00000001531) #36 ENSDLEG00000001544 #37 ENSDLEG00000001558 #37 MMGT1 (ENSDLEG00000001581) Suina ANCESTRAL SPECIES 7 ENSGT00950000183189.a.b.b ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000162864.a #23 ENSGT00940000160971 #11 ENSGT00390000010165.i.b.b.a ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00390000014547.d.a.b ENSGT00940000160108 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 15 SLITRK4 (ENSCWAG00000012982) #11 ENSCWAG00000012967 LDOC1 (ENSCWAG00000012948) #16 ENSCWAG00000012915 SOX3 (ENSCWAG00000012837) #17 ENSCWAG00000012813 ENSCWAG00000012778 #18 ENSCWAG00000012723 ENSCWAG00000012705 ATP11C (ENSCWAG00000012057) #19 MCF2 (ENSCWAG00000007508) #20 F9 (ENSCWAG00000007270) #21 FGF13 (ENSCWAG00000007218) #22 ENSCWAG00000007195 #23 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 147 ENSCWAG00000002952 #22 ENSCWAG00000002959 #22 Chacoan peccary MODERN SPECIES 147 ENSCWAG00000002959 #22 ENSCWAG00000002952 #22 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00950000183189.a.b.b ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT01020000231229 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Carnivora ANCESTRAL SPECIES 11 ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Caniformia ANCESTRAL SPECIES 22 ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT00910000146020 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Canidae ANCESTRAL SPECIES 50 ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000165902 ENSGT00390000004380.e.a ENSGT00940000160971 #11 ENSGT00940000164798.c ENSGT00940000162721 #16 ENSGT00940000164798.d ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00940000168213 Canis_lupus ANCESTRAL SPECIES 22 ENSGT00890000139436.A.b.d ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00390000004380.e.a.b ENSGT00940000160971 #11 ENSGT00940000164798.c ENSGT00940000162721 #16 ENSGT00940000164798.d ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00390000005102.a.a ENSGT00940000160788 #24 ENSGT00940000163139 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01080000257620 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 Dingo MODERN SPECIES 383 ENSCAFG00020024379 ENSCAFG00020024390 ENSCAFG00020024392 SLITRK2 (ENSCAFG00020024421) #8 ENSCAFG00020024425 SLITRK4 (ENSCAFG00020024429) #11 ENSCAFG00020024432 LDOC1 (ENSCAFG00020024434) #16 ENSCAFG00020024437 SOX3 (ENSCAFG00020024439) #17 ENSCAFG00020024444 ENSCAFG00020024450 #18 ATP11C (ENSCAFG00020024462) #19 MCF2 (ENSCAFG00020024494) #20 F9 (ENSCAFG00020024498) #21 FGF13 (ENSCAFG00020024504) #22 ENSCAFG00020024507 #23 ENSCAFG00020024509 ZIC3 (ENSCAFG00020024510) #24 ENSCAFG00020024513 GPR101 (ENSCAFG00020024514) #25 ENSCAFG00020024518 #26 RBMX (ENSCAFG00020024552) #27 ARHGEF6 (ENSCAFG00020024572) #28 CD40LG (ENSCAFG00020024627) #29 ENSCAFG00020024629 VGLL1 (ENSCAFG00020024634) #31 HTATSF1 (ENSCAFG00020024635) #32 BRS3 (ENSCAFG00020024639) #33 ADGRG4 (ENSCAFG00020024646) #34 ENSCAFG00020024654 #35 Red fox MODERN SPECIES 75 ENSVVUG00000000672 SLITRK2 (ENSVVUG00000000503) #8 ENSVVUG00000000464 ENSVVUG00000000415 ENSVVUG00000000396 ENSVVUG00000000346 SLITRK4 (ENSVVUG00000000328) #11 ENSVVUG00000000288 ENSVVUG00000000181 LDOC1 (ENSVVUG00000000153) #16 ENSVVUG00000000104 CUNHXorf66 (ENSVVUG00000021515) #18 ATP11C (ENSVVUG00000021465) #19 MCF2 (ENSVVUG00000021407) #20 F9 (ENSVVUG00000021395) #21 FGF13 (ENSVVUG00000021385) #22 ENSVVUG00000021381 ENSVVUG00000021380 ZIC3 (ENSVVUG00000021378) #24 Caniformia_b ANCESTRAL SPECIES 27 ENSGT00950000182974.a.a.a.a ENSGT00390000007953 ENSGT00950000183189.a.b.b ENSGT01090000261020.B ENSGT00940000165847 ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000162864.b #23 ENSGT00940000160788.a #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Mustelinae ANCESTRAL SPECIES 148 ENSGT00940000160971 #11 ENSGT00940000162721 #16 ENSGT00940000164798 ENSGT00940000162359 #17 ENSGT00390000002886.b.b ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000160788.a #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 American mink MODERN SPECIES 83 SLITRK4 (ENSNVIG00000022627) #11 ENSNVIG00000022631 LDOC1 (ENSNVIG00000022636) #16 ENSNVIG00000022637 SOX3 (ENSNVIG00000022644) #17 ENSNVIG00000000062 ENSNVIG00000000077 #18 ATP11C (ENSNVIG00000000083) #19 MCF2 (ENSNVIG00000000331) #20 FA9 (ENSNVIG00000000999) #21 FGF13 (ENSNVIG00000001046) #22 ENSNVIG00000001107 #23 ENSNVIG00000001135 ZIC3 (ENSNVIG00000001184) #24 GPR101 (ENSNVIG00000001200) #25 ENSNVIG00000001206 #26 RBMX (ENSNVIG00000001236) #27 ARHGEF6 (ENSNVIG00000001293) #28 CD40LG (ENSNVIG00000001334) #29 ENSNVIG00000001366 #31 HTATSF1 (ENSNVIG00000001372) #32 BRS3 (ENSNVIG00000001386) #33 ADGRG4 (ENSNVIG00000001403) #34 ENSNVIG00000001467 #35 FHL1 (ENSNVIG00000001503) #36 SLC9A6 (ENSNVIG00000001615) #37 Ursidae ANCESTRAL SPECIES ENSGT00940000162313 #22 Ursus ANCESTRAL SPECIES 188 ENSGT00940000160971 #11 ENSGT00940000164798 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000163347 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744.b #34 ENSGT00950000182941.b.a.d #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 American black bear MODERN SPECIES 889 FGF13 (ENSUAMG00000003874) #22 ENSUAMG00000003867 #23 ENSUAMG00000003862 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000162313 #22 Chiroptera ANCESTRAL SPECIES 48 ENSGT00940000160971 #11 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000161248 #8 ENSGT00940000165847 ENSGT00950000183189.a.b.b ENSGT00390000007953 ENSGT00950000182974.a.a.a.a ENSGT00970000197053 ENSGT00940000156803 ENSGT00390000012182 ENSGT00940000161825 ENSGT00940000158388 ENSGT00940000163633 ENSGT00730000111366 ENSGT00940000157029 ENSGT00940000153669.b Microchiroptera ANCESTRAL SPECIES 45 ENSGT00940000160971 #11 ENSGT00940000162313 #22 ENSGT00940000162864.b #23 ENSGT00940000161248 #8 ENSGT00940000165847 ENSGT00950000183189.a.b.b ENSGT00390000007953 ENSGT00950000182974.a.a.a.a ENSGT00970000197053 ENSGT00940000156803 ENSGT00390000012182 ENSGT00940000161825 ENSGT00940000158388 ENSGT00730000111366 ENSGT00940000157029 ENSGT00940000153669.b ENSGT00940000154344.a Microbat MODERN SPECIES 939 ENSMLUG00000030224 SOX3 (ENSMLUG00000000946) #17 ENSMLUG00000000942 ENSMLUG00000029680 ENSMLUG00000027972 ENSMLUG00000027548 ENSMLUG00000013633 #18 ATP11C (ENSMLUG00000008018) #19 MCF2 (ENSMLUG00000011218) #20 F9 (ENSMLUG00000011202) #21 ENSMLUG00000027963 FGF13 (ENSMLUG00000005625) #22 ENSMLUG00000005622 #23 ZIC3 (ENSMLUG00000011691) #24 ENSMLUG00000025989 GPR101 (ENSMLUG00000010221) #25 ENSMLUG00000029450 ENSMLUG00000013209 #27 ENSMLUG00000007996 ARHGEF6 (ENSMLUG00000007783) #28 CD40LG (ENSMLUG00000007777) #29 ENSMLUG00000009256 #31 ENSMLUG00000009234 #32 BRS3 (ENSMLUG00000010461) #33 ENSMLUG00000014341 #35 FHL1 (ENSMLUG00000014336) #36 SLC9A6 (ENSMLUG00000014329) #37 Atlantogenata ANCESTRAL SPECIES 87 ENSGT00940000162359 #17 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000166884 ENSGT00940000160971 #11 ENSGT00940000162313 #22 ENSGT00940000162864 #23 ENSGT00940000160788 #24 ENSGT00940000161248 #8 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Xenarthra ANCESTRAL SPECIES ENSGT00940000162313 #22 Armadillo MODERN SPECIES 4528 FGF13 (ENSDNOG00000044091) #22 ENSDNOG00000039524 #23 ENSDNOG00000049250 #23 Sloth MODERN SPECIES 2341 FGF13 (ENSCHOG00000004376) #22 Afrotheria ANCESTRAL SPECIES 104 ENSGT00940000162359 #17 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000166884 ENSGT00940000162313 #22 ENSGT00940000162864.f #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.a.a ENSGT00390000016655.a.b Afrotheria_a ANCESTRAL SPECIES 104 ENSGT00940000162359 #17 ENSGT00390000004226 #18 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000166884 ENSGT00940000162313 #22 ENSGT00940000162864.f #23 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000153425.a.a.b.b #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000162744 #34 ENSGT00940000171852 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.a.a Elephant MODERN SPECIES 597 ENSLAFG00000029309 ENSLAFG00000031501 SOX3 (ENSLAFG00000030155) #17 ENSLAFG00000032766 #18 ATP11C (ENSLAFG00000007057) #19 MCF2 (ENSLAFG00000016947) #20 F9 (ENSLAFG00000005897) #21 ENSLAFG00000025714 FGF13 (ENSLAFG00000003454) #22 ENSLAFG00000021898 #23 ENSLAFG00000026822 ZIC3 (ENSLAFG00000007048) #24 GPR101 (ENSLAFG00000026609) #25 ENSLAFG00000005568 #27 ARHGEF6 (ENSLAFG00000005561) #28 CD40LG (ENSLAFG00000005559) #29 VGLL1 (ENSLAFG00000014300) #31 HTATSF1 (ENSLAFG00000014307) #32 BRS3 (ENSLAFG00000026825) #33 ADGRG4 (ENSLAFG00000021418) #34 ENSLAFG00000006921 FHL1 (ENSLAFG00000026557) #36 SLC9A6 (ENSLAFG00000000085) #37 MMGT1 (ENSLAFG00000004024) Tenrec MODERN SPECIES 7472 FGF13 (ENSETEG00000019785) #22 ENSETEG00000019781 #23 Marsupialia ANCESTRAL SPECIES 30 ENSGT00940000161248 #8 ENSGT00390000005826.b.k ENSGT00940000153886.a.b.c ENSGT00940000160971 #11 ENSGT00390000007230.h ENSGT00940000162359 #17 ENSGT00390000006758.b.b ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000163347 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000165216 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.b.a.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.g #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104.g Marsupialia_b ANCESTRAL SPECIES 29 ENSGT00940000161248 #8 ENSGT00390000005826.b.k ENSGT00940000153886.a.b.c ENSGT00940000160971 #11 ENSGT00390000007230.h ENSGT00940000162359 #17 ENSGT00390000006758.b.b ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000163347 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000165216 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.b.a.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.g #32 ENSGT01100000263512.b.b.b #33 ENSGT00390000010165.i.b.b.a ENSGT00940000167502 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Diprotodontia ANCESTRAL SPECIES 95 ENSGT00940000162359 #17 ENSGT00390000006758.b.b ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000165216 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.b.a.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.g #32 ENSGT01100000263512.b.b.b #33 ENSGT00390000010165.i.b.b.a Diprotodontia_a ANCESTRAL SPECIES 88 ENSGT00940000162359 #17 ENSGT00390000006758.b.b ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000153348.A.b ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000165216 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000153425.b.a.a ##27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.g #32 ENSGT01100000263512.b.b.b #33 ENSGT00390000010165.i.b.b.a Common wonbat MODERN SPECIES 1185 SOX3 (ENSVURG00010016214) #17 ENSVURG00010016222 ATP11C (ENSVURG00010016232) #19 ENSVURG00010016290 #20 F9 (ENSVURG00010016338) #21 ENSVURG00010016365 FGF13 (ENSVURG00010016376) #22 ZIC3 (ENSVURG00010016409) #24 ENSVURG00010016416 ENSVURG00010016424 #26 ENSVURG00010016435 ##27 ARHGEF6 (ENSVURG00010016466) #28 CD40LG (ENSVURG00010016563) #29 ENSVURG00010016567 #32 BRS3 (ENSVURG00010016575) #33 ENSVURG00010016580 koala MODERN SPECIES 219 ENSPCIG00000017205 ENSPCIG00000015908 SOX3 (ENSPCIG00000030420) #17 ENSPCIG00000030419 ATP11C (ENSPCIG00000030416) #19 MCF2 (ENSPCIG00000001535) #20 F9 (ENSPCIG00000001572) #21 ENSPCIG00000006274 FGF13 (ENSPCIG00000006275) #22 ZIC3 (ENSPCIG00000034935) #24 ENSPCIG00000007900 ENSPCIG00000029722 #25 ENSPCIG00000029719 #26 ENSPCIG00000029716 ##27 ARHGEF6 (ENSPCIG00000029715) #28 CD40LG (ENSPCIG00000033804) #29 ENSPCIG00000018898 #31 ENSPCIG00000018896 #32 BRS3 (ENSPCIG00000018894) #33 ENSPCIG00000037054 Sauria ANCESTRAL SPECIES 21 ENSGT00940000153669.b ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Archelosauria ANCESTRAL SPECIES 24 ENSGT00940000153669.b ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Archosauria ANCESTRAL SPECIES 15 ENSGT00940000157822 ENSGT00940000159162 ENSGT00940000178841 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Aves ANCESTRAL SPECIES 23 ENSGT00940000157822 ENSGT00940000159162 ENSGT00940000178841 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Neognathae ANCESTRAL SPECIES 22 ENSGT00940000157822 ENSGT00940000159162 ENSGT00940000178841 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Neognathae_b ANCESTRAL SPECIES ENSGT00940000157822 ENSGT00940000159162 ENSGT00940000178841 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Passeriformes ANCESTRAL SPECIES 24 ENSGT00940000157822 ENSGT00940000178841 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 Passeriformes_d ANCESTRAL SPECIES 27 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000157822 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 Passeriformes_g ANCESTRAL SPECIES 28 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000157822 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902.f #32 ENSGT01100000263512.b.b.b #33 Medium ground finch MODERN SPECIES 52 KLHL4 (ENSGFOG00000012871) ENSGFOG00000012864 DIAPH2 (ENSGFOG00000012503) ENSGFOG00000012475 ENSGFOG00000012471 PCDH19 (ENSGFOG00000012468) TNMD (ENSGFOG00000012465) TSPAN6 (ENSGFOG00000012462) SYTL4 (ENSGFOG00000012452) CSTF2 (ENSGFOG00000012429) NOX1 (ENSGFOG00000012400) ENSGFOG00000012393 ATP11C (ENSGFOG00000012311) #19 MCF2 (ENSGFOG00000012080) #20 F9 (ENSGFOG00000012055) #21 FGF13 (ENSGFOG00000012050) #22 ENSGFOG00000012045 #26 ENSGFOG00000012039 #27 ARHGEF6 (ENSGFOG00000011954) #28 CD40LG (ENSGFOG00000011947) #29 ENSGFOG00000011943 #31 HTATSF1 (ENSGFOG00000011937) #32 BRS3 (ENSGFOG00000011932) #33 Great tit MODERN SPECIES 24 PCDH19 (ENSPMJG00000000871) ENSPMJG00000000855 TNMD (ENSPMJG00000000852) TSPAN6 (ENSPMJG00000000848) SRPX2 (ENSPMJG00000000844) SYTL4 (ENSPMJG00000000830) TRMT12 (ENSPMJG00000000822) CSTF2 (ENSPMJG00000000799) NOX1 (ENSPMJG00000000771) ENSPMJG00000000764 ENSPMJG00000000754 ATP11C (ENSPMJG00000000673) #19 MCF2 (ENSPMJG00000000593) #20 F9 (ENSPMJG00000000579) #21 ENSPMJG00000000543 FGF13 (ENSPMJG00000000515) #22 ZIC3 (ENSPMJG00000000472) #24 ENSPMJG00000000398 #26 ENSPMJG00000000340 #27 ARHGEF6 (ENSPMJG00000000272) #28 CD40LG (ENSPMJG00000000266) #29 VGLL1 (ENSPMJG00000000256) #31 HTATSF1 (ENSPMJG00000000240) #32 ENSPMJG00000000207 ENSPMJG00000000196 Neognathae_c ANCESTRAL SPECIES 29 ENSGT00940000157822 ENSGT00940000159162 ENSGT00940000178841 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Golden eagle MODERN SPECIES 13 DIAPH2 (ENSACCG00020016390) PCDH19 (ENSACCG00020016501) ENSACCG00020016502 TNMD (ENSACCG00020016505) TSPAN6 (ENSACCG00020016508) ENSACCG00020016511 SRPX2 (ENSACCG00020016523) SYTL4 (ENSACCG00020016540) TRMT12 (ENSACCG00020016542) CSTF2 (ENSACCG00020016547) NOX1 (ENSACCG00020016552) ENSACCG00020016553 ATP11C (ENSACCG00020016561) #19 MCF2 (ENSACCG00020016574) #20 F9 (ENSACCG00020016586) #21 FGF13 (ENSACCG00020016589) #22 ZIC3 (ENSACCG00020016591) #24 ENSACCG00020016593 ENSACCG00020016595 #26 ENSACCG00020016601 #27 ARHGEF6 (ENSACCG00020016606) #28 CD40LG (ENSACCG00020016610) #29 VGLL1 (ENSACCG00020016612) #31 HTATSF1 (ENSACCG00020016615) #32 BRS3 (ENSACCG00020016618) #33 ENSACCG00020016623 #35 FHL1 (ENSACCG00020016633) #36 SLC9A6 (ENSACCG00020016671) #37 MMGT1 (ENSACCG00020016729) INTS6L (ENSACCG00020016733) MOSPD1 (ENSACCG00020016741) Galloanserae ANCESTRAL SPECIES 21 ENSGT00940000157822 ENSGT00940000178841 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Phasianidae ANCESTRAL SPECIES 2 ENSGT00940000157822 ENSGT00940000178841 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Japanese quail MODERN SPECIES 22 KLHL4 (ENSCJPG00005016469) ENSCJPG00005016454 DIAPH2 (ENSCJPG00005016407) PCDH19 (ENSCJPG00005016400) TNMD (ENSCJPG00005016399) TSPAN6 (ENSCJPG00005016398) SRPX2 (ENSCJPG00005016397) SYTL4 (ENSCJPG00005016396) TRMT12 (ENSCJPG00005016395) CSTF2 (ENSCJPG00005016394) NOX1 (ENSCJPG00005016393) ENSCJPG00005016392 ATP11C (ENSCJPG00005016391) #19 MCF2 (ENSCJPG00005016390) #20 F9 (ENSCJPG00005016389) #21 FGF13 (ENSCJPG00005016386) #22 ZIC3 (ENSCJPG00005016381) #24 ENSCJPG00005016378 #26 ENSCJPG00005016376 #27 ARHGEF6 (ENSCJPG00005016375) #28 CD40LG (ENSCJPG00005016374) #29 VGLL1 (ENSCJPG00005016373) #31 HTATSF1 (ENSCJPG00005016372) #32 BRS3 (ENSCJPG00005016371) #33 ENSCJPG00005016370 ENSCJPG00005016369 ENSCJPG00005016368 #35 FHL1 (ENSCJPG00005016338) #36 SLC9A6 (ENSCJPG00005016337) #37 MMGT1 (ENSCJPG00005016334) INTS6L (ENSCJPG00005016333) Phasianidae_b ANCESTRAL SPECIES 24 ENSGT00940000157822 ENSGT00940000178841 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Turkey MODERN SPECIES 29 ENSMGAG00000004445 DIAPH2 (ENSMGAG00000004346) PCDH19 (ENSMGAG00000004330) TNMD (ENSMGAG00000004293) TSPAN6 (ENSMGAG00000004268) SRPX2 (ENSMGAG00000004261) SYTL4 (ENSMGAG00000004197) ENSMGAG00000004174 CSTF2 (ENSMGAG00000004139) NOX1 (ENSMGAG00000004075) ENSMGAG00000004062 ARL13A (ENSMGAG00000004193) ATP11C (ENSMGAG00000003966) #19 MCF2 (ENSMGAG00000003860) #20 F9 (ENSMGAG00000003817) #21 FGF13 (ENSMGAG00000003791) #22 ENSMGAG00000003625 #26 ENSMGAG00000003594 #27 ARHGEF6 (ENSMGAG00000003749) #28 CD40LG (ENSMGAG00000019571) #29 VGLL1 (ENSMGAG00000003609) #31 HTATSF1 (ENSMGAG00000003558) #32 BRS3 (ENSMGAG00000003548) #33 ENSMGAG00000019911 MAP7D3 (ENSMGAG00000003518) #35 FHL1 (ENSMGAG00000003498) #36 SLC9A6 (ENSMGAG00000003437) #37 MMGT1 (ENSMGAG00000021585) INTS6L (ENSMGAG00000003369) MOSPD1 (ENSMGAG00000003340) ENSMGAG00000003324 Chicken MODERN SPECIES 33 DIAPH2 (ENSGALG00010018053) ENSGALG00010015765 PCDH19 (ENSGALG00010015758) TNMD (ENSGALG00010016777) TSPAN6 (ENSGALG00010016772) SRPX2 (ENSGALG00010016757) SYTL4 (ENSGALG00010016750) TRMT12 (ENSGALG00010016742) CSTF2 (ENSGALG00010016704) NOX1 (ENSGALG00010016678) ENSGALG00010016651 ENSGALG00010017548 ATP11C (ENSGALG00010017534) #19 MCF2 (ENSGALG00010017477) #20 F9 (ENSGALG00010017445) #21 FGF13 (ENSGALG00010017434) #22 ZIC3 (ENSGALG00010017413) #24 TM9SF2L (ENSGALG00010015911) #26 RBMXL1 (ENSGALG00010015895) #27 ARHGEF6 (ENSGALG00010015866) #28 CD40LG (ENSGALG00010016205) #29 VGLL1 (ENSGALG00010014555) #31 HTATSF1 (ENSGALG00010019961) #32 BRS3 (ENSGALG00010014519) #33 MAP7D3 (ENSGALG00010015018) #35 FHL1 (ENSGALG00010014929) #36 SLC9A6 (ENSGALG00010014893) #37 MMGT1 (ENSGALG00010014856) INTS6L (ENSGALG00010016260) MOSPD1 (ENSGALG00010016224) PABIR3 (ENSGALG00010015778) Anatidae ANCESTRAL SPECIES 24 ENSGT00940000175287 ENSGT00940000157822 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Duck MODERN SPECIES 1 ENSAPLG00000006804 DIAPH2 (ENSAPLG00000003882) ENSAPLG00000026226 PCDH19 (ENSAPLG00000003793) ENSAPLG00000028030 SRPX2 (ENSAPLG00000008584) SYTL4 (ENSAPLG00000007671) ENSAPLG00000019209 CSTF2 (ENSAPLG00000007255) ENSAPLG00000006524 ENSAPLG00000006318 ARL13A (ENSAPLG00000031098) ATP11C (ENSAPLG00000005048) #19 MCF2 (ENSAPLG00000004315) #20 F9 (ENSAPLG00000010425) #21 FGF13 (ENSAPLG00000010508) #22 ZIC3 (ENSAPLG00000028802) #24 ENSAPLG00000010658 #26 ENSAPLG00000029262 #27 ARHGEF6 (ENSAPLG00000011391) #28 CD40LG (ENSAPLG00000012271) #29 VGLL1 (ENSAPLG00000012400) #31 HTATSF1 (ENSAPLG00000012401) #32 ENSAPLG00000012590 ENSAPLG00000022516 ENSAPLG00000012655 #35 FHL1 (ENSAPLG00000031131) #36 SLC9A6 (ENSAPLG00000012890) #37 MMGT1 (ENSAPLG00000018112) INTS6L (ENSAPLG00000013725) MOSPD1 (ENSAPLG00000013746) African ostrich MODERN SPECIES 970 DIAPH2 (ENSSCUG00000018344) PCDH19 (ENSSCUG00000016280) TNMD (ENSSCUG00000016282) TSPAN6 (ENSSCUG00000016283) SYTL4 (ENSSCUG00000016287) TRMT12 (ENSSCUG00000016289) CSTF2 (ENSSCUG00000016292) NOX1 (ENSSCUG00000016304) ENSSCUG00000016312 ATP11C (ENSSCUG00000016320) #19 MCF2 (ENSSCUG00000016334) #20 F9 (ENSSCUG00000016341) #21 FGF13 (ENSSCUG00000016350) #22 ENSSCUG00000016381 #26 ENSSCUG00000016406 #27 ARHGEF6 (ENSSCUG00000016414) #28 CD40LG (ENSSCUG00000016424) #29 VGLL1 (ENSSCUG00000016430) #31 HTATSF1 (ENSSCUG00000016438) #32 BRS3 (ENSSCUG00000016448) #33 ENSSCUG00000016455 ENSSCUG00000016464 #35 FHL1 (ENSSCUG00000016469) #36 SLC9A6 (ENSSCUG00000016474) #37 MMGT1 (ENSSCUG00000016496) INTS6L (ENSSCUG00000016503) MOSPD1 (ENSSCUG00000016514) ENSSCUG00000016520 Cryptodira ANCESTRAL SPECIES 29 ENSGT00940000153669.b ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Testudinoidea ANCESTRAL SPECIES 24 ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452.q ENSGT00940000157452.r ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000165216 ENSGT00940000163390.a #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Testudinidae ANCESTRAL SPECIES 21 ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452.q ENSGT00940000157452.r ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000165216 ENSGT00940000163390.a #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Abingdon island giant tortoise MODERN SPECIES 288 SOX3 (ENSCABG00000011008) #17 ATP11C (ENSCABG00000010993) #19 MCF2 (ENSCABG00000010523) #20 F9 (ENSCABG00000010467) #21 FGF13 (ENSCABG00000010462) #22 ZIC3 (ENSCABG00000010460) #24 ENSCABG00000010020 #26 ENSCABG00000010005 #27 ARHGEF6 (ENSCABG00000010002) #28 CD40LG (ENSCABG00000009990) #29 ENSCABG00000009987 ENSCABG00000009986 VGLL1 (ENSCABG00000009984) #31 HTATSF1 (ENSCABG00000009981) #32 BRS3 (ENSCABG00000009980) #33 MAP7D3 (ENSCABG00000009961) #35 FHL1 (ENSCABG00000009930) #36 SLC9A6 (ENSCABG00000009572) #37 MMGT1 (ENSCABG00000009560) INTS6L (ENSCABG00000008556) Goode s thornscrub tortoise MODERN SPECIES 23 MAMLD1 (ENSGEVG00005012154) ENSGEVG00005012176 ENSGEVG00005012198 TMEM185A (ENSGEVG00005012246) ENSGEVG00005012285 IDS (ENSGEVG00005012312) ENSGEVG00005012369 ENSGEVG00005012672 FMR1 (ENSGEVG00005012753) SLITRK2 (ENSGEVG00005012826) #8 SLITRK4 (ENSGEVG00005012843) #11 SOX3 (ENSGEVG00005012862) #17 ATP11C (ENSGEVG00005013525) #19 MCF2 (ENSGEVG00005016390) #20 F9 (ENSGEVG00005016537) #21 FGF13 (ENSGEVG00005016687) #22 ZIC3 (ENSGEVG00005016724) #24 ENSGEVG00005016761 ENSGEVG00005016815 #26 ENSGEVG00005016877 #26 ENSGEVG00005016908 #27 ARHGEF6 (ENSGEVG00005016956) #28 CD40LG (ENSGEVG00005017037) #29 VGLL1 (ENSGEVG00005017059) #31 HTATSF1 (ENSGEVG00005017089) #32 BRS3 (ENSGEVG00005017120) #33 MAP7D3 (ENSGEVG00005017266) #35 FHL1 (ENSGEVG00005017477) #36 SLC9A6 (ENSGEVG00005017582) #37 MMGT1 (ENSGEVG00005017911) INTS6L (ENSGEVG00005017945) Emydidae ANCESTRAL SPECIES 32 ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452.q ENSGT00940000157452.r ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516.r #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000160788 #24 ENSGT00940000165216 ENSGT00940000163390.a #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 Three-toed box turtle MODERN SPECIES 61 MTM1 (ENSTMTG00000023221) MAMLD1 (ENSTMTG00000023220) ENSTMTG00000023219 ENSTMTG00000023218 TMEM185A (ENSTMTG00000023217) IDS (ENSTMTG00000023216) ENSTMTG00000023215 ENSTMTG00000023214 FMR1 (ENSTMTG00000023213) SLITRK2 (ENSTMTG00000023211) #8 SLITRK4 (ENSTMTG00000023210) #11 SOX3 (ENSTMTG00000023209) #17 ATP11C (ENSTMTG00000023208) #19 MCF2 (ENSTMTG00000023207) #20 ENSTMTG00000023206 #21 FGF13 (ENSTMTG00000023205) #22 ZIC3 (ENSTMTG00000023204) #24 ENSTMTG00000023203 #24 ENSTMTG00000023202 ENSTMTG00000023201 #26 ENSTMTG00000023199 #27 ARHGEF6 (ENSTMTG00000023198) #28 CD40LG (ENSTMTG00000023197) #29 ENSTMTG00000023196 ENSTMTG00000023195 VGLL1 (ENSTMTG00000023194) #31 HTATSF1 (ENSTMTG00000023193) #32 BRS3 (ENSTMTG00000023192) #33 ENSTMTG00000023191 MAP7D3 (ENSTMTG00000023190) #35 FHL1 (ENSTMTG00000023189) #36 Lepidosauria ANCESTRAL SPECIES 30 ENSGT00940000153669.b ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 tuatara MODERN SPECIES 1491 CD99L2 (ENSSPUG00000013859) MTMR1 (ENSSPUG00000013970) MTM1 (ENSSPUG00000013987) MAMLD1 (ENSSPUG00000014011) ENSSPUG00000014026 ENSSPUG00000014033 ENSSPUG00000014041 ENSSPUG00000014048 IDS (ENSSPUG00000014056) FMR1 (ENSSPUG00000014177) ENSSPUG00000014199 SOX3 (ENSSPUG00000014219) #17 ATP11C (ENSSPUG00000014232) #19 MCF2 (ENSSPUG00000014316) #20 F9 (ENSSPUG00000014572) #21 FGF13 (ENSSPUG00000014595) #22 ENSSPUG00000014620 #26 ENSSPUG00000014648 #27 ARHGEF6 (ENSSPUG00000014711) #28 CD40LG (ENSSPUG00000014758) #29 HTATSF1 (ENSSPUG00000014767) #32 BRS3 (ENSSPUG00000014779) #33 MAP7D3 (ENSSPUG00000014797) #35 FHL1 (ENSSPUG00000014828) #36 SLC9A6 (ENSSPUG00000014846) #37 MMGT1 (ENSSPUG00000014875) INTS6L (ENSSPUG00000014885) MOSPD1 (ENSSPUG00000000026) PABIR2 (ENSSPUG00000000074) HPRT1 (ENSSPUG00000000093) PHF6 (ENSSPUG00000000121) Episquamata ANCESTRAL SPECIES 14 ENSGT00940000157029 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516.o #21 ENSGT00940000159516.p #21 ENSGT00940000162313 #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT01100000263502.A.a.a.a.a ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Toxicofera DUPLICATION Toxicofera ANCESTRAL SPECIES 17 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516.o #21 ENSGT00960000187127.c ENSGT00940000159516.p #21 ENSGT00940000162313.g #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Elapidae ANCESTRAL SPECIES 14 ENSGT00730000111366 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a.i ENSGT00950000182974.a.a.a.a.j ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516.o #21 ENSGT00940000159516.p.a #21 ENSGT00940000162313.g #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT01070000253816.a.b #29 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Elapidae_a ANCESTRAL SPECIES 46 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a.i ENSGT00950000182974.a.a.a.a.j ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516.o #21 ENSGT00940000159516.p.a #21 ENSGT00940000162313.g #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT00990000212640 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT00940000162744 #34 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Acanthophiinae ANCESTRAL SPECIES 45 ENSGT00390000012182 ENSGT00940000157452 ENSGT00940000158388 ENSGT00940000156803 ENSGT00950000182974.a.a.a.a.i ENSGT00950000182974.a.a.a.a.j ENSGT00950000183189.a.b.b ENSGT00940000161248 #8 ENSGT00940000160971 #11 ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516.o #21 ENSGT00940000159516.p.a #21 ENSGT00940000162313.g #22 ENSGT00940000160788 #24 ENSGT00940000163390 #26 ENSGT00940000153425 #27 ENSGT00940000158723 #28 ENSGT00990000212640 ENSGT00530000063353.b #31 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000167502 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Mainland tiger snake MODERN SPECIES 248 ATP11C (ENSNSUG00000016345) #19 MCF2 (ENSNSUG00000016346) #20 ENSNSUG00000016355 #21 ENSNSUG00000016356 #21 FGF13 (ENSNSUG00000016357) #22 ZIC3 (ENSNSUG00000016358) #24 ENSNSUG00000016359 #26 ENSNSUG00000016360 #27 ARHGEF6 (ENSNSUG00000016362) #28 ENSNSUG00000016363 VGLL1 (ENSNSUG00000016364) #31 HTATSF1 (ENSNSUG00000016365) #32 BRS3 (ENSNSUG00000016366) #33 ENSNSUG00000016382 ENSNSUG00000016383 #35 FHL1 (ENSNSUG00000016385) #36 SLC9A6 (ENSNSUG00000016386) #37 INTS6L (ENSNSUG00000016488) MOSPD1 (ENSNSUG00000016543) PABIR2 (ENSNSUG00000016545) Eastern brown snake MODERN SPECIES 86 ENSPTXG00000011142 ENSPTXG00000011139 TMEM185A (ENSPTXG00000011136) IDS (ENSPTXG00000011089) ENSPTXG00000011088 ENSPTXG00000011087 FMR1 (ENSPTXG00000011086) SLITRK2 (ENSPTXG00000011085) #8 SLITRK4 (ENSPTXG00000011084) #11 SOX3 (ENSPTXG00000011083) #17 ATP11C (ENSPTXG00000011018) #19 MCF2 (ENSPTXG00000010997) #20 ENSPTXG00000010995 #21 ENSPTXG00000013420 #21 FGF13 (ENSPTXG00000013419) #22 ZIC3 (ENSPTXG00000013418) #24 ENSPTXG00000013416 #26 ENSPTXG00000013414 #27 ARHGEF6 (ENSPTXG00000013413) #28 ENSPTXG00000013412 VGLL1 (ENSPTXG00000013411) #31 HTATSF1 (ENSPTXG00000013410) #32 BRS3 (ENSPTXG00000013380) #33 ENSPTXG00000013377 FHL1 (ENSPTXG00000013376) #36 SLC9A6 (ENSPTXG00000012711) #37 MMGT1 (ENSPTXG00000012706) INTS6L (ENSPTXG00000012704) MOSPD1 (ENSPTXG00000012702) PABIR2 (ENSPTXG00000012696) Indian cobra MODERN SPECIES 13 MTMR1 (ENSNNAG00000017761) MTM1 (ENSNNAG00000017766) MAMLD1 (ENSNNAG00000017769) ENSNNAG00000017773 ENSNNAG00000017778 TMEM185A (ENSNNAG00000017798) IDS (ENSNNAG00000017800) ENSNNAG00000017813 FMR1 (ENSNNAG00000017819) SLITRK2 (ENSNNAG00000017823) #8 ATP11C (ENSNNAG00000017854) #19 ENSNNAG00000017937 #20 ENSNNAG00000017938 #21 ENSNNAG00000017941 #21 ENSNNAG00000017942 FGF13 (ENSNNAG00000017944) #22 ZIC3 (ENSNNAG00000017947) #24 ENSNNAG00000017951 #26 ENSNNAG00000017958 #27 ARHGEF6 (ENSNNAG00000017970) #28 CD40LG (ENSNNAG00000017980) #29 VGLL1 (ENSNNAG00000017986) #31 HTATSF1 (ENSNNAG00000017993) #32 BRS3 (ENSNNAG00000018005) #33 ENSNNAG00000018021 FHL1 (ENSNNAG00000018025) #36 SLC9A6 (ENSNNAG00000018039) #37 MMGT1 (ENSNNAG00000018061) INTS6L (ENSNNAG00000018069) MOSPD1 (ENSNNAG00000018087) PABIR2 (ENSNNAG00000018092) Lizard MODERN SPECIES 524 ENSACAG00000008514 #22 Toxicofera ANCESTRAL SPECIES ENSGT00940000162313.h #22 Lizard MODERN SPECIES 1641 ENSACAG00000041324 #22 Actinopterygii ANCESTRAL SPECIES 26 ENSGT00950000182887.C.a.b ENSGT00940000153936.b ENSGT00940000175321 ENSGT00940000159817 ENSGT00940000174692 ENSGT00940000157424 ENSGT00940000153222.a.b.b.b.b ENSGT00940000163684 ENSGT00950000182887.C.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000156341 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 ENSGT00390000016655.a.b Neopterygii ANCESTRAL SPECIES 94 ENSGT00940000163684 ENSGT00950000182887.C.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974 #20 ENSGT00940000159516 #21 ENSGT00940000162313 #22 ENSGT00940000163347 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT00390000009902 #32 ENSGT01100000263512.b.b.b #33 ENSGT00940000156341 ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833 #36 ENSGT00940000153460.c.b #37 ENSGT00510000047104 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000162313.a #22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000162313.a #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000162313.a #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000162313.a #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000162313.a #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000162313.a #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000162313.a #22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000162313.a #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000162313.a #22 Pomacentridae ANCESTRAL SPECIES ENSGT00940000162313.a #22 Bicolor damselfish MODERN SPECIES 238 fgf13a (ENSSPAG00000008445) #22 zic6 (ENSSPAG00000008462) zic3 (ENSSPAG00000008467) #24 GPR101 (ENSSPAG00000008476) #25 ENSSPAG00000008490 #26 rbmx (ENSSPAG00000008582) ARHGEF6 (ENSSPAG00000008617) #28 ENSSPAG00000008666 tmtops3a (ENSSPAG00000008676) ENSSPAG00000008683 ENSSPAG00000008691 ENSSPAG00000008708 MAP7D3 (ENSSPAG00000008732) #35 fhl1a (ENSSPAG00000008849) #36 slc9a6a (ENSSPAG00000008880) #37 taf7 (ENSSPAG00000008943) Cichlidae ANCESTRAL SPECIES ENSGT00940000162313.a #22 Midas cichlid MODERN SPECIES 396 TEX11 (ENSACIG00000010735) DLG3 (ENSACIG00000010803) ENSACIG00000010838 ENSACIG00000010852 GDPD2 (ENSACIG00000010862) pdzd11 (ENSACIG00000010884) stard14 (ENSACIG00000010898) RAB41 (ENSACIG00000010914) arr3b (ENSACIG00000010938) inppl1b (ENSACIG00000010968) P2RY4 (ENSACIG00000011017) sox3 (ENSACIG00000011038) #17 ATP11C (ENSACIG00000011154) #19 MCF2 (ENSACIG00000011216) #20 f9a (ENSACIG00000011291) fgf13a (ENSACIG00000011490) #22 zic6 (ENSACIG00000011507) zic3 (ENSACIG00000011517) #24 GPR101 (ENSACIG00000011530) #25 ENSACIG00000011538 #26 rbmx (ENSACIG00000011576) rbmx (ENSACIG00000011598) ARHGEF6 (ENSACIG00000011648) #28 cd40lg (ENSACIG00000011701) tmtops3a (ENSACIG00000011719) ENSACIG00000011738 ENSACIG00000011746 ENSACIG00000011764 ENSACIG00000011770 ENSACIG00000011779 #35 fhl1a (ENSACIG00000011822) #36 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000162313.a #22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000162313.a #22 Aplocheiloidei ANCESTRAL SPECIES 13 ENSGT00940000164144 ENSGT00390000006492 ENSGT00940000159565 ENSGT00940000175781 ENSGT00940000159625 ENSGT00940000177072 ENSGT00940000153222.a.b.b.b.b ENSGT00940000165821 ENSGT00940000159656.b ENSGT00950000182887.C.b.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000162313.a #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00940000174529 ENSGT00940000177286 ENSGT00950000182941.b.a #35 ENSGT00940000154833.b #36 ENSGT00940000153460.c.b.c.a #37 ENSGT00940000160861 ENSGT00390000001289.b.a Turquoise killifish MODERN SPECIES 1610 CHIC1 (ENSNFUG00015001673) cdx4 (ENSNFUG00015001677) kdrl (ENSNFUG00015001689) TEX11 (ENSNFUG00015001715) DLG3 (ENSNFUG00015001756) GDPD2 (ENSNFUG00015001846) ENSNFUG00015001858 pdzd11 (ENSNFUG00015001865) STARD10 (ENSNFUG00015001873) rab41 (ENSNFUG00015001924) arr3b (ENSNFUG00015002033) inppl1b (ENSNFUG00015002148) P2RY4 (ENSNFUG00015002181) ATP11C (ENSNFUG00015002247) #19 MCF2 (ENSNFUG00015002415) #20 FGF13A (ENSNFUG00015002474) #22 ENSNFUG00015002494 ZIC6 (ENSNFUG00015002497) zic3 (ENSNFUG00015002505) #24 ENSNFUG00015002510 GPR101 (ENSNFUG00015002513) #25 ENSNFUG00015002593 #26 RBMX (ENSNFUG00015003076) ARHGEF6 (ENSNFUG00015003105) #28 cd40lg (ENSNFUG00015003206) ENSNFUG00015003208 tmtops3a (ENSNFUG00015003212) ENSNFUG00015003215 ENSNFUG00015003220 ENSNFUG00015003235 #35 fhl1a (ENSNFUG00015003275) #36 Mangrove rivulus MODERN SPECIES 10 cdx4 (ENSKMAG00000002979) kdrl (ENSKMAG00000002950) TEX11 (ENSKMAG00000002839) DLG3 (ENSKMAG00000002742) ENSKMAG00000002705 GDPD2 (ENSKMAG00000002693) pdzd11 (ENSKMAG00000002663) stard14 (ENSKMAG00000002624) ENSKMAG00000002545 arr3b (ENSKMAG00000002497) inppl1b (ENSKMAG00000002382) P2RY4 (ENSKMAG00000002353) sox3 (ENSKMAG00000002324) #17 ATP11C (ENSKMAG00000002108) #19 MCF2 (ENSKMAG00000002047) #20 fgf13a (ENSKMAG00000001997) #22 zic6 (ENSKMAG00000001964) zic3 (ENSKMAG00000001946) #24 GPR101 (ENSKMAG00000001937) #25 ENSKMAG00000001817 #26 rbmx (ENSKMAG00000001754) ARHGEF6 (ENSKMAG00000001618) #28 cd40lg (ENSKMAG00000001603) tmtops3a (ENSKMAG00000001581) ENSKMAG00000001573 ENSKMAG00000001551 MAP7D3 (ENSKMAG00000001506) #35 fhl1a (ENSKMAG00000001465) #36 slc9a6a (ENSKMAG00000001437) #37 taf7 (ENSKMAG00000001397) ENSKMAG00000001384 Oryzias ANCESTRAL SPECIES ENSGT00940000162313.a #22 Oryzias_a ANCESTRAL SPECIES ENSGT00940000162313.a #22 Chinese medaka MODERN SPECIES 771 SRPX2 (ENSOSIG00000021838) tspan7 (ENSOSIG00000021820) mid1ip1l (ENSOSIG00000021816) ENSOSIG00000021812 cstf2 (ENSOSIG00000021810) arl13a (ENSOSIG00000021803) tmem35 (ENSOSIG00000021798) CENPI (ENSOSIG00000021788) drp2 (ENSOSIG00000021109) ENSOSIG00000021059 taf7 (ENSOSIG00000021058) slc9a6a (ENSOSIG00000019991) #37 ENSOSIG00000019924 #36 ENSOSIG00000019921 ENSOSIG00000019877 #20 fgf13a (ENSOSIG00000019841) #22 zic6 (ENSOSIG00000019834) zic3 (ENSOSIG00000019831) #24 GPR101 (ENSOSIG00000019828) #25 ENSOSIG00000019794 #26 rbmx (ENSOSIG00000019770) ARHGEF6 (ENSOSIG00000019666) #28 ENSOSIG00000019643 tmtops3a (ENSOSIG00000019642) ENSOSIG00000019637 ENSOSIG00000019634 ENSOSIG00000019630 ENSOSIG00000019627 #35 P2RY4 (ENSOSIG00000019620) inppl1b (ENSOSIG00000019612) arr3b (ENSOSIG00000019550) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000162313.a #22 Eupercaria ANCESTRAL SPECIES ENSGT00940000162313.a #22 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000162313.a #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00940000162313.a #22 Perciformes ANCESTRAL SPECIES 13 ENSGT00390000006492 ENSGT00940000159565 ENSGT00940000175781 ENSGT00940000177072 ENSGT00940000159625 ENSGT00940000153222.a.b.b.b.b ENSGT00940000165821 ENSGT00940000154769 ENSGT00950000182887.C.b.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000166780 ENSGT00940000162313.a #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00940000174529 ENSGT00390000011545 ENSGT00940000156341.e.b ENSGT00940000177286 ENSGT00950000182941.b.a #35 ENSGT00940000154833.b #36 ENSGT00940000153460.c.b.c.a #37 Cottioidei ANCESTRAL SPECIES ENSGT00940000162313.a #22 Lumpfish MODERN SPECIES 1 kdrl (ENSCLMG00005012878) TEX11 (ENSCLMG00005012882) DLG3 (ENSCLMG00005012964) ENSCLMG00005020450 GDPD2 (ENSCLMG00005020451) pdzd11 (ENSCLMG00005020456) stard14 (ENSCLMG00005020458) rab41 (ENSCLMG00005020460) arr3b (ENSCLMG00005020461) inppl1b (ENSCLMG00005020476) P2RY4 (ENSCLMG00005020477) sox3 (ENSCLMG00005020478) #17 ATP11C (ENSCLMG00005020485) #19 MCF2 (ENSCLMG00005021606) #20 f9a (ENSCLMG00005021609) fgf13a (ENSCLMG00005021611) #22 zic6 (ENSCLMG00005021612) zic3 (ENSCLMG00005021615) #24 GPR101 (ENSCLMG00005021616) #25 ENSCLMG00005021618 #26 rbmx (ENSCLMG00005021619) ARHGEF6 (ENSCLMG00005021623) #28 cd40lg (ENSCLMG00005021849) tmtops3a (ENSCLMG00005021851) ENSCLMG00005021852 ENSCLMG00005021853 ENSCLMG00005001282 ENSCLMG00005001295 fhl1a (ENSCLMG00005001309) #36 slc9a6a (ENSCLMG00005001626) #37 taf7 (ENSCLMG00005002689) Perciformes_a ANCESTRAL SPECIES 11 ENSGT00940000159565 ENSGT00940000175781 ENSGT00940000177072 ENSGT00940000159625 ENSGT00940000153222.a.b.b.b.b ENSGT00940000165821 ENSGT00940000154769 ENSGT00940000163684 ENSGT00950000182887.C.b.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000166780 ENSGT00940000162313.a #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00940000174529 ENSGT00390000011545 ENSGT00940000156341.e.b ENSGT00940000177286 ENSGT00950000182941.b.a #35 ENSGT00940000154833.b #36 ENSGT00940000153460.c.b.c.a #37 Channel bull blenny MODERN SPECIES 1 kdrl (ENSCGOG00000007344) TEX11 (ENSCGOG00000007336) DLG3 (ENSCGOG00000001579) ENSCGOG00000001436 GDPD2 (ENSCGOG00000001424) pdzd11 (ENSCGOG00000001409) stard14 (ENSCGOG00000001406) RAB41 (ENSCGOG00000001360) arr3b (ENSCGOG00000001288) inppl1b (ENSCGOG00000022183) P2RY4 (ENSCGOG00000022176) sox3 (ENSCGOG00000022175) #17 ATP11C (ENSCGOG00000021427) #19 MCF2 (ENSCGOG00000021402) #20 f9a (ENSCGOG00000021378) fgf13a (ENSCGOG00000021374) #22 zic6 (ENSCGOG00000021370) zic3 (ENSCGOG00000021368) #24 GPR101 (ENSCGOG00000021367) #25 ENSCGOG00000021252 #26 rbmx (ENSCGOG00000021244) ARHGEF6 (ENSCGOG00000020223) #28 cd40lg (ENSCGOG00000020162) tmtops3a (ENSCGOG00000020032) si:dkeyp-11e3.1 (ENSCGOG00000020024) ENSCGOG00000020017 ENSCGOG00000020012 MAP7D3 (ENSCGOG00000019999) #35 fhl1a (ENSCGOG00000019995) #36 slc9a6a (ENSCGOG00000019328) #37 taf7 (ENSCGOG00000019067) Pike perch MODERN SPECIES 18 TEX11 (ENSSLUG00000013330) DLG3 (ENSSLUG00000005796) ENSSLUG00000005205 ENSSLUG00000024673 GDPD2 (ENSSLUG00000024672) pdzd11 (ENSSLUG00000024669) stard14 (ENSSLUG00000024668) rab41 (ENSSLUG00000024628) arr3b (ENSSLUG00000024616) inppl1b (ENSSLUG00000024606) P2RY4 (ENSSLUG00000024601) sox3 (ENSSLUG00000024600) #17 ATP11C (ENSSLUG00000023789) #19 MCF2 (ENSSLUG00000023618) #20 f9a (ENSSLUG00000023603) fgf13a (ENSSLUG00000023540) #22 zic6 (ENSSLUG00000023522) zic3 (ENSSLUG00000023517) #24 ENSSLUG00000023512 #25 ENSSLUG00000023415 #26 rbmx (ENSSLUG00000023393) ARHGEF6 (ENSSLUG00000023331) #28 cd40lg (ENSSLUG00000023304) tmtops3a (ENSSLUG00000023301) ENSSLUG00000023300 fhl1a (ENSSLUG00000023290) #36 slc9a6a (ENSSLUG00000023204) #37 taf7 (ENSSLUG00000023166) ENSSLUG00000023141 drp2 (ENSSLUG00000023074) CENPI (ENSSLUG00000023055) Eupecaria_C ANCESTRAL SPECIES ENSGT00940000162313.a #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000162313.a #22 European seabass MODERN SPECIES 12 chic1 (ENSDLAG00005026664) cdx4 (ENSDLAG00005020399) kdrl (ENSDLAG00005020327) TEX11 (ENSDLAG00005020301) DLG3 (ENSDLAG00005018403) GDPD2 (ENSDLAG00005018213) pdzd11 (ENSDLAG00005031967) stard14 (ENSDLAG00005018184) ENSDLAG00005018091 ARR3 (ENSDLAG00005015670) sox3 (ENSDLAG00005031755) #17 inppl1b (ENSDLAG00005015278) ENSDLAG00005013443 #19 MCF2 (ENSDLAG00005013298) #20 f9a (ENSDLAG00005035024) fgf13a (ENSDLAG00005001908) #22 zic6 (ENSDLAG00005013241) zic3 (ENSDLAG00005013231) #24 ENSDLAG00005013224 #25 ENSDLAG00005011867 #26 rbmx (ENSDLAG00005011819) ARHGEF6 (ENSDLAG00005010806) #28 cd40lg (ENSDLAG00005031878) tmtops3a (ENSDLAG00005034408) ENSDLAG00005010750 ENSDLAG00005010715 ENSDLAG00005010699 ENSDLAG00005010402 #35 fhl1a (ENSDLAG00005010366) #36 slc9a6a (ENSDLAG00005009261) #37 taf7 (ENSDLAG00005009174) Tetraodontidae ANCESTRAL SPECIES ENSGT00940000162313.a #22 Tetraodon MODERN SPECIES npas4a (ENSTNIG00000016823) mrpl11 (ENSTNIG00000016824) kdrl (ENSTNIG00000016825) TEX11 (ENSTNIG00000016826) DLG3 (ENSTNIG00000016827) GDPD2 (ENSTNIG00000016828) pdzd11 (ENSTNIG00000016829) stard14 (ENSTNIG00000016830) RAB41 (ENSTNIG00000016831) arr3b (ENSTNIG00000016832) inppl1b (ENSTNIG00000016833) P2RY4 (ENSTNIG00000016834) ATP11C (ENSTNIG00000016836) #19 MCF2 (ENSTNIG00000016837) #20 f9a (ENSTNIG00000016838) fgf13a (ENSTNIG00000016839) #22 zic6 (ENSTNIG00000016840) zic3 (ENSTNIG00000016841) #24 ENSTNIG00000016842 #25 ENSTNIG00000016843 #26 rbmx (ENSTNIG00000016844) ARHGEF6 (ENSTNIG00000016845) #28 ENSTNIG00000001027 tmtops3a (ENSTNIG00000016846) si:dkeyp-11e3.1 (ENSTNIG00000016847) ENSTNIG00000016848 ENSTNIG00000016849 #35 fhl1a (ENSTNIG00000016850) #36 slc9a6a (ENSTNIG00000016851) #37 taf7 (ENSTNIG00000016852) ENSTNIG00000016853 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000162313.a #22 Carangaria ANCESTRAL SPECIES ENSGT00940000162313.a #22 Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000162313.a #22 Turbot MODERN SPECIES 4 cdx4 (ENSSMAG00000016233) kdrl (ENSSMAG00000016149) ENSSMAG00000016032 DLG3 (ENSSMAG00000015950) GDPD2 (ENSSMAG00000015929) pdzd11 (ENSSMAG00000015918) stard14 (ENSSMAG00000015909) rab41 (ENSSMAG00000015774) arr3b (ENSSMAG00000015726) inppl1b (ENSSMAG00000015577) ENSSMAG00000015572 sox3 (ENSSMAG00000015517) #17 ENSSMAG00000014976 #19 MCF2 (ENSSMAG00000014874) #20 f9a (ENSSMAG00000014862) fgf13a (ENSSMAG00000014781) #22 zic6 (ENSSMAG00000024144) zic3 (ENSSMAG00000014754) #24 GPR101 (ENSSMAG00000014750) #25 ENSSMAG00000014676 #26 rbmx (ENSSMAG00000014636) ARHGEF6 (ENSSMAG00000014544) #28 ENSSMAG00000014515 ENSSMAG00000014507 ENSSMAG00000014489 MAP7D3 (ENSSMAG00000014289) #35 slc9a6a (ENSSMAG00000014210) #37 taf7 (ENSSMAG00000014177) fhl1a (ENSSMAG00000014260) #36 ENSSMAG00000013761 drp2 (ENSSMAG00000013635) Carangaria_A ANCESTRAL SPECIES 17 ENSGT00940000164144 ENSGT00390000006492 ENSGT00940000159565 ENSGT00940000177072 ENSGT00940000159625 ENSGT00940000153222.a.b.b.b.b ENSGT00940000165821 ENSGT00940000163684 ENSGT00950000182887.C.b.b.b ENSGT00940000166245.e ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000166780 ENSGT00940000162313.a #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00940000174529 ENSGT01030000234935 ENSGT00390000011545 ENSGT00940000156341.e.b ENSGT00940000177286 ENSGT00950000182941.b.a #35 ENSGT00940000154833.b #36 Seriola ANCESTRAL SPECIES ENSGT00940000162313.a #22 Greater amberjack MODERN SPECIES 113 kdrl (ENSSDUG00000018531) TEX11 (ENSSDUG00000018663) DLG3 (ENSSDUG00000018705) ENSSDUG00000018828 GDPD2 (ENSSDUG00000018847) pdzd11 (ENSSDUG00000018923) stard14 (ENSSDUG00000018951) ENSSDUG00000018970 arr3b (ENSSDUG00000019005) inppl1b (ENSSDUG00000019133) P2RY4 (ENSSDUG00000019185) sox3 (ENSSDUG00000019191) #17 ATP11C (ENSSDUG00000019260) #19 MCF2 (ENSSDUG00000019428) #20 f9a (ENSSDUG00000019533) fgf13a (ENSSDUG00000019973) #22 zic6 (ENSSDUG00000019988) zic3 (ENSSDUG00000019996) #24 GPR101 (ENSSDUG00000000102) #25 ENSSDUG00000000121 #26 rbmx (ENSSDUG00000000242) ARHGEF6 (ENSSDUG00000000303) #28 cd40lg (ENSSDUG00000000418) tmtops3a (ENSSDUG00000000424) ENSSDUG00000000451 ENSSDUG00000000476 ENSSDUG00000000500 ENSSDUG00000000516 MAP7D3 (ENSSDUG00000000536) #35 fhl1a (ENSSDUG00000000559) #36 slc9a6a (ENSSDUG00000000635) #37 Barramundi perch MODERN SPECIES 122 cdx4 (ENSLCAG00010019815) kdrl (ENSLCAG00010019788) ENSLCAG00010019784 DLG3 (ENSLCAG00010017999) GDPD2 (ENSLCAG00010017747) pdzd11 (ENSLCAG00010017745) stard14 (ENSLCAG00010017742) RAB41 (ENSLCAG00010017699) arr3b (ENSLCAG00010017648) inppl1b (ENSLCAG00010017641) P2RY4 (ENSLCAG00010017639) sox3 (ENSLCAG00010017637) #17 ATP11C (ENSLCAG00010017188) #19 MCF2 (ENSLCAG00010016892) #20 f9a (ENSLCAG00010016828) fgf13a (ENSLCAG00010016809) #22 zic6 (ENSLCAG00010016801) zic3 (ENSLCAG00010016797) #24 GPR101 (ENSLCAG00010016792) #25 ENSLCAG00010016716 #26 rbmx (ENSLCAG00010016690) ARHGEF6 (ENSLCAG00010016630) #28 cd40lg (ENSLCAG00010016599) tmtops3a (ENSLCAG00010016598) ENSLCAG00010016592 ENSLCAG00010016587 ENSLCAG00010016583 MAP7D3 (ENSLCAG00010016573) #35 fhl1a (ENSLCAG00010016555) #36 slc9a6a (ENSLCAG00010016488) #37 taf7 (ENSLCAG00010016445) Anabantaria ANCESTRAL SPECIES ENSGT00940000162313.a #22 Anabantoidei ANCESTRAL SPECIES ENSGT00940000162313.a #22 Siamese fighting fish MODERN SPECIES 1 kdrl (ENSBSLG00000012136) TEX11 (ENSBSLG00000012564) DLG3 (ENSBSLG00000008568) GDPD2 (ENSBSLG00000011068) pdzd11 (ENSBSLG00000011100) stard14 (ENSBSLG00000011115) rab41 (ENSBSLG00000011163) arr3b (ENSBSLG00000011420) inppl1b (ENSBSLG00000011499) P2RY4 (ENSBSLG00000011538) sox3 (ENSBSLG00000011543) #17 ENSBSLG00000011591 ENSBSLG00000011934 #19 MCF2 (ENSBSLG00000014679) #20 f9a (ENSBSLG00000014807) fgf13a (ENSBSLG00000015184) #22 zic6 (ENSBSLG00000015331) zic3 (ENSBSLG00000015344) #24 GPR101 (ENSBSLG00000015364) #25 ENSBSLG00000015456 #26 rbmx (ENSBSLG00000015977) ARHGEF6 (ENSBSLG00000015998) #28 cd40lg (ENSBSLG00000016119) tmtops3a (ENSBSLG00000016131) ENSBSLG00000016223 ENSBSLG00000016226 ENSBSLG00000016600 MAP7D3 (ENSBSLG00000016760) #35 fhl1a (ENSBSLG00000017065) #36 slc9a6a (ENSBSLG00000017371) #37 taf7 (ENSBSLG00000019683) Pinecone sodierfish MODERN SPECIES 1 cdx4 (ENSMMDG00005012728) kdrl (ENSMMDG00005012724) DLG3 (ENSMMDG00005011645) ENSMMDG00005011623 GDPD2 (ENSMMDG00005011621) pdzd11 (ENSMMDG00005011619) stard14 (ENSMMDG00005011568) ENSMMDG00005011507 arr3b (ENSMMDG00005011247) inppl1b (ENSMMDG00005011230) P2RY4 (ENSMMDG00005011224) sox3 (ENSMMDG00005011219) #17 ATP11C (ENSMMDG00005007650) #19 MCF2 (ENSMMDG00005007571) #20 f9a (ENSMMDG00005007392) fgf13a (ENSMMDG00005007359) #22 zic6 (ENSMMDG00005007358) zic3 (ENSMMDG00005007357) #24 GPR101 (ENSMMDG00005007356) #25 ENSMMDG00005007264 #26 rbmx (ENSMMDG00005007256) ARHGEF6 (ENSMMDG00005001987) #28 ENSMMDG00005001878 tmtops3a (ENSMMDG00005001876) ENSMMDG00005001874 ENSMMDG00005001872 ENSMMDG00005001868 ENSMMDG00005001859 #35 fhl1a (ENSMMDG00005001856) #36 slc9a6a (ENSMMDG00005001816) #37 taf7 (ENSMMDG00005001770) Cod MODERN SPECIES 1 cdx4 (ENSGMOG00000003732) kdrl (ENSGMOG00000003756) TEX11 (ENSGMOG00000003844) DLG3 (ENSGMOG00000003948) GDPD2 (ENSGMOG00000004001) pdzd11 (ENSGMOG00000004050) stard14 (ENSGMOG00000004066) rab41 (ENSGMOG00000004095) arr3b (ENSGMOG00000004118) inppl1b (ENSGMOG00000004160) P2RY4 (ENSGMOG00000004229) sox3 (ENSGMOG00000020190) #17 ENSGMOG00000004238 #19 MCF2 (ENSGMOG00000004299) #20 f9a (ENSGMOG00000004361) fgf13a (ENSGMOG00000025511) #22 zic6 (ENSGMOG00000004419) zic3 (ENSGMOG00000004438) #24 GPR101 (ENSGMOG00000004449) #25 ENSGMOG00000004455 #26 rbmx (ENSGMOG00000004496) ARHGEF6 (ENSGMOG00000004513) #28 ENSGMOG00000028846 tmtops3a (ENSGMOG00000004579) ENSGMOG00000004806 ENSGMOG00000022607 ENSGMOG00000031440 #35 fhl1a (ENSGMOG00000004892) #36 slc9a6a (ENSGMOG00000004907) #37 taf7 (ENSGMOG00000004949) ENSGMOG00000004974 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000162313.a #22 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 40 ENSGT00390000003601.a.f ENSGT00940000165070.g ENSGT00940000164144.e ENSGT00940000159565.bb.a ENSGT00940000159625.e ENSGT00940000153222.a.b.b.b.b.ab ENSGT00940000165821.e ENSGT00940000163684 ENSGT00950000182887.C.b.b.b.b ENSGT00940000166245.d ENSGT01030000234621.C.a.a.a.e ENSGT00940000162359.d #17 ENSGT00940000158878.i #19 ENSGT00940000156974.e.a.e #20 ENSGT00940000166780 ENSGT00940000162313.a.a #22 ENSGT00940000165969.c ENSGT00940000160788.n.a #24 ENSGT00940000165126.h ENSGT00940000158723.h #28 ENSGT00510000051633.c ENSGT01100000263502.A.a.a.a.a.a.f ENSGT00390000011545.b ENSGT00940000156341.e.b.a ENSGT01030000234935 ENSGT00950000182941.b.a.l #35 ENSGT00960000189021 ENSGT00940000154833.b.c #36 ENSGT00940000153460.c.b.c.a.d #37 ENSGT00940000160861 ENSGT00940000153467.a.b.e.a Huchen MODERN SPECIES 2360 fgf13a (ENSHHUG00000052171) #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000162313.a.a #22 Salmo ANCESTRAL SPECIES 43 ENSGT00940000165070.g ENSGT00940000164144.e ENSGT00940000159565.bb.a ENSGT00940000159625.e ENSGT00940000153222.a.b.b.b.b.ab ENSGT00940000165821.e ENSGT00940000154769.qb.a.b ENSGT00940000163684 ENSGT00950000182887.C.b.b.b.b ENSGT00940000166245.d ENSGT01030000234621.C.a.a.a.e ENSGT00940000158878.i #19 ENSGT00940000156974.e.a.e #20 ENSGT00940000166780 ENSGT00940000163347.b ENSGT00940000162313.a.a #22 ENSGT00940000165969.c ENSGT00940000160788.n.a #24 ENSGT00940000162539.f #25 ENSGT00940000163390.g.a #26 ENSGT00940000165126.h ENSGT00940000158723.h #28 ENSGT00510000051633.c ENSGT01100000263502.A.a.a.a.a.a.f ENSGT00390000011545.b ENSGT00940000156341.e.b.a ENSGT01030000234935 ENSGT00950000182941.b.a.l #35 ENSGT00940000154833.b.c #36 ENSGT00940000153460.c.b.c.a.d #37 ENSGT00940000160861.m Atlantic salmon MODERN SPECIES 28 lnx2b (ENSSSAG00000046679) chic1 (ENSSSAG00000101765) cdx4 (ENSSSAG00000046804) kdrl (ENSSSAG00000046825) ENSSSAG00000084089 pdzd11 (ENSSSAG00000048332) stard14 (ENSSSAG00000048349) RAB41 (ENSSSAG00000048429) arr3b (ENSSSAG00000048905) inppl1b (ENSSSAG00000052789) ENSSSAG00000055648 ENSSSAG00000108924 ENSSSAG00000119748 ENSSSAG00000055816 #19 f9a (ENSSSAG00000062920) fgf13a (ENSSSAG00000062928) #22 zic6 (ENSSSAG00000119790) ENSSSAG00000105810 zic3 (ENSSSAG00000062961) #24 ENSSSAG00000062978 #26 GPR101 (ENSSSAG00000106205) #25 rbmx (ENSSSAG00000063214) ARHGEF6 (ENSSSAG00000063247) #28 ENSSSAG00000116023 cd40l (ENSSSAG00000063346) si:dkeyp-11e3.1 (ENSSSAG00000063350) MAP7D3 (ENSSSAG00000063381) #35 fhl1a (ENSSSAG00000063443) #36 slc9a6a (ENSSSAG00000063494) #37 taf7 (ENSSSAG00000064257) drp2 (ENSSSAG00000064304) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000162313.a.a #22 Rainbow trout MODERN SPECIES 23 ENSOMYG00000054241 DLG3 (ENSOMYG00000044649) GDPD2 (ENSOMYG00000044427) pdzd11 (ENSOMYG00000044419) stard14 (ENSOMYG00000044415) rab41 (ENSOMYG00000044388) arr3b (ENSOMYG00000044208) inppl1b (ENSOMYG00000044072) P2RY4 (ENSOMYG00000043984) sox3 (ENSOMYG00000043974) #17 ENSOMYG00000066259 ENSOMYG00000043633 #19 MCF2 (ENSOMYG00000043416) #20 f9a (ENSOMYG00000043362) ENSOMYG00000058500 fgf13a (ENSOMYG00000043331) #22 zic6 (ENSOMYG00000050325) zic3 (ENSOMYG00000043279) #24 ENSOMYG00000043260 #25 ENSOMYG00000040849 #26 rbmx (ENSOMYG00000040525) ARHGEF6 (ENSOMYG00000040461) #28 cd40l (ENSOMYG00000040434) si:dkeyp-11e3.1 (ENSOMYG00000056975) ENSOMYG00000040412 ENSOMYG00000042417 ENSOMYG00000065572 ENSOMYG00000040317 #35 fhl1a (ENSOMYG00000040240) #36 ENSOMYG00000049722 slc9a6a (ENSOMYG00000038310) #37 Salmoninae ANCESTRAL SPECIES 12 ENSGT00940000164144.f ENSGT00390000006492 ENSGT00940000159565.bb.b ENSGT00940000177072 ENSGT00940000159565.cb ENSGT00940000159625.f ENSGT00940000153222.a.b.b.b.b.`b ENSGT00940000165821.f ENSGT00940000154769.qb ENSGT00950000182887.C.b.b.b.a ENSGT00940000166245.c ENSGT01030000234621.C.a.a.a.f ENSGT00940000162359.c.a #17 ENSGT00940000158878.j #19 ENSGT00940000156974.e.a.f #20 ENSGT00940000162313.a.b #22 ENSGT00940000160788.n.b #24 ENSGT00940000163347 ENSGT00940000165969.d ENSGT00940000162539.e #25 ENSGT00940000163390.g.b #26 ENSGT00940000165126.g ENSGT00940000158723.g #28 ENSGT00510000051633.d ENSGT01100000263502.A.a.a.a.a.a.e ENSGT00390000011545.a ENSGT00940000156341.e.b.b ENSGT00950000182941.b.a.k #35 ENSGT00940000154833.b.d #36 ENSGT00940000153460.c.b.c.a.c #37 ENSGT00390000001289.b.a Salmoninae_a ANCESTRAL SPECIES ENSGT00940000162313.a.b #22 Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000165070.h ENSGT00940000164144.f ENSGT00390000006492 ENSGT00940000159565.bb.b ENSGT00940000177072 ENSGT00940000159625.f ENSGT00940000153222.a.b.b.b.b.`b ENSGT00940000165821.f ENSGT00940000154769.qb.a.a ENSGT00950000182887.C.b.b.b.a ENSGT00940000166245.c ENSGT01030000234621.C.a.a.a.f ENSGT00940000158878.j #19 ENSGT00940000156974.e.a.f #20 ENSGT00940000163347.a.a ENSGT00940000162313.a.b #22 ENSGT00940000165969.d ENSGT00940000160788.n.b #24 ENSGT00940000162539.e #25 ENSGT00940000163390.g.b #26 ENSGT00940000165126.g ENSGT00940000158723.g #28 ENSGT00510000051633.d ENSGT01100000263502.A.a.a.a.a.a.e ENSGT00390000011545.a ENSGT00940000156341.e.b.b ENSGT00950000182941.b.a.k #35 ENSGT00940000154833.b.d #36 ENSGT00940000153460.c.b.c.a.c #37 ENSGT00940000160861.n ENSGT00390000001289.b.a Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00390000003601.a.e ENSGT00940000165070.h ENSGT00940000164144.f ENSGT00390000006492 ENSGT00940000159565.bb.b ENSGT00940000177072 ENSGT00940000159625.f ENSGT00940000153222.a.b.b.b.b.`b ENSGT00940000165821.f ENSGT00940000154769.qb.a.a ENSGT00950000182887.C.b.b.b.a ENSGT00940000166245.c ENSGT01030000234621.C.a.a.a.f ENSGT00940000158878.j #19 ENSGT00940000156974.e.a.f #20 ENSGT00940000162313.a.b #22 ENSGT00940000160788.n.b #24 ENSGT00940000165969.d ENSGT00940000162539.e #25 ENSGT00940000163390.g.b #26 ENSGT00940000165126.g ENSGT00940000158723.g #28 ENSGT00510000051633.d ENSGT01100000263502.A.a.a.a.a.a.e ENSGT00390000011545.a ENSGT00940000156341.e.b.b ENSGT00950000182941.b.a.k #35 ENSGT00940000154833.b.d #36 ENSGT00940000153460.c.b.c.a.c #37 ENSGT00390000001289.b.a ENSGT00940000153467.a.b.e.b.a.a Chinook salmon MODERN SPECIES 13 chic1 (ENSOTSG00005006459) cdx4 (ENSOTSG00005006458) kdrl (ENSOTSG00005006454) TEX11 (ENSOTSG00005006448) DLG3 (ENSOTSG00005006041) ENSOTSG00005006026 GDPD2 (ENSOTSG00005006025) pdzd11 (ENSOTSG00005006023) stard14 (ENSOTSG00005006020) rab41 (ENSOTSG00005006014) arr3b (ENSOTSG00005003489) inppl1b (ENSOTSG00005001976) P2RY4 (ENSOTSG00005020494) ATP11C (ENSOTSG00005011889) #19 ENSOTSG00005011846 #20 fgf13a (ENSOTSG00005011842) #22 zic3 (ENSOTSG00005011838) #24 zic6 (ENSOTSG00005011837) GPR101 (ENSOTSG00005011834) #25 ENSOTSG00005010098 #26 rbmx (ENSOTSG00005010042) ARHGEF6 (ENSOTSG00005009912) #28 cd40lg (ENSOTSG00005009909) tmtops3a (ENSOTSG00005009888) si:dkeyp-11e3.1 (ENSOTSG00005009887) ENSOTSG00005009886 MAP7D3 (ENSOTSG00005009885) #35 fhl1a (ENSOTSG00005009883) #36 slc9a6a (ENSOTSG00005009419) #37 ENSOTSG00005009410 drp2 (ENSOTSG00005009406) Rainbow trout MODERN SPECIES 5 ENSOMYG00000024750 ENSOMYG00000024678 DLG3 (ENSOMYG00000021238) ENSOMYG00000020891 GDPD2 (ENSOMYG00000020875) pdzd11 (ENSOMYG00000020866) stard14 (ENSOMYG00000020683) arr3b (ENSOMYG00000020309) inppl1b (ENSOMYG00000019644) P2RY4 (ENSOMYG00000019415) ENSOMYG00000012086 ATP11C (ENSOMYG00000015463) #19 ENSOMYG00000068928 #20 ENSOMYG00000015045 #20 ENSOMYG00000021600 fgf13a (ENSOMYG00000072335) #22 zic6 (ENSOMYG00000014946) zic3 (ENSOMYG00000014958) #24 ENSOMYG00000014931 #25 ENSOMYG00000012551 #26 rbmx (ENSOMYG00000012362) ARHGEF6 (ENSOMYG00000012248) #28 cd40lg (ENSOMYG00000012190) tmtops3a (ENSOMYG00000061140) si:dkeyp-11e3.1 (ENSOMYG00000012178) ENSOMYG00000058984 ENSOMYG00000049442 ENSOMYG00000012163 #35 fhl1a (ENSOMYG00000012123) #36 slc9a6a (ENSOMYG00000011013) #37 taf7 (ENSOMYG00000010796) Otomorpha ANCESTRAL SPECIES 15 ENSGT00940000165070 ENSGT00390000003601.a ENSGT00940000164372 ENSGT00940000160686 ENSGT00940000154400 ENSGT00940000155075.a.b ENSGT00940000157256 ENSGT00950000182887.C.b.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000166780 ENSGT00940000163347 ENSGT00940000162313.a #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00390000011545 ENSGT00940000156341.e.b ENSGT01030000234935.c.b ENSGT00950000182941.b.a #35 ENSGT00940000154833.b #36 ENSGT00940000153460.c.b.c.a #37 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Otophysi ANCESTRAL SPECIES 22 ENSGT00390000003601.a ENSGT00940000164372 ENSGT00940000160686 ENSGT00940000154400 ENSGT00940000165599.C ENSGT00940000166047 ENSGT00940000155075.a.b ENSGT00940000157256 ENSGT00950000182887.C.b.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000166780 ENSGT00940000162313.a #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00390000011545 ENSGT00940000156341.e.b ENSGT01030000234935.c.b ENSGT00950000182941.b.a #35 ENSGT00940000154833.b #36 ENSGT00940000153460.c.b.c.a #37 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Characiphysae ANCESTRAL SPECIES ENSGT00940000162313.a #22 Characiphysae_b ANCESTRAL SPECIES 7 ENSGT00390000003601.a ENSGT00940000164372 ENSGT00940000160686 ENSGT00940000154400 ENSGT00940000166047 ENSGT00940000154622.a.b.t ENSGT00940000155075.a.b ENSGT00940000157256 ENSGT00950000182887.C.b.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000166780 ENSGT00940000162313.a #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00390000011545 ENSGT00940000156341.e.b ENSGT01030000234935.c.b ENSGT00950000182941.b.a #35 ENSGT00940000154833.b #36 ENSGT00940000153460.c.b.c.a #37 ENSGT00510000047104 Electric eel MODERN SPECIES 325 f9a (ENSEEEG00000024440) fgf13a (ENSEEEG00000024434) #22 zic6 (ENSEEEG00000024432) zic3 (ENSEEEG00000024431) #24 GPR101 (ENSEEEG00000024430) #25 ENSEEEG00000024424 #26 rbmx (ENSEEEG00000024418) ARHGEF6 (ENSEEEG00000024393) #28 cd40lg (ENSEEEG00000024389) ENSEEEG00000024388 ENSEEEG00000024387 ENSEEEG00000024386 #35 fhl1a (ENSEEEG00000024384) #36 slc9a6a (ENSEEEG00000024383) #37 mmgt1 (ENSEEEG00000024382) ints6l (ENSEEEG00000024379) mospd1 (ENSEEEG00000024375) Characoidei ANCESTRAL SPECIES ENSGT00940000162313.a #22 Mexicana tetra MODERN SPECIES 16 cdx4 (ENSAMXG00000035488) chic1 (ENSAMXG00000000144) lnx2b (ENSAMXG00000000142) slc25a43 (ENSAMXG00000033142) slc25a5 (ENSAMXG00000038622) ube2a (ENSAMXG00000000133) nkrf (ENSAMXG00000000131) arr3b (ENSAMXG00000000116) ENSAMXG00000039435 inppl1b (ENSAMXG00000000100) P2RY4 (ENSAMXG00000025369) sox3 (ENSAMXG00000025368) #17 ATP11C (ENSAMXG00000000067) #19 MCF2 (ENSAMXG00000000049) #20 f9a (ENSAMXG00000000047) fgf13a (ENSAMXG00000000040) #22 zic6 (ENSAMXG00000012318) zic3 (ENSAMXG00000030913) #24 GPR101 (ENSAMXG00000012340) #25 ENSAMXG00000012370 #26 rbmx (ENSAMXG00000019990) ARHGEF6 (ENSAMXG00000019963) #28 cd40lg (ENSAMXG00000036925) tmtops3a (ENSAMXG00000035713) ENSAMXG00000040979 si:dkeyp-11e3.1 (ENSAMXG00000030729) ENSAMXG00000019901 ENSAMXG00000032429 ENSAMXG00000019885 #35 fhl1a (ENSAMXG00000019867) #36 slc9a6a (ENSAMXG00000008605) #37 Cyprinoidei ANCESTRAL SPECIES 9 ENSGT00390000003601.a.d ENSGT00940000164372 ENSGT00940000160686 ENSGT00940000154400 ENSGT00940000165599.C ENSGT00940000166047 ENSGT00940000155075.a.b ENSGT00940000157256 ENSGT00950000182887.C.b.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000166780 ENSGT00940000162313.a #22 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00390000011545 ENSGT00950000182941.b.a #35 ENSGT00940000154833.b #36 ENSGT00940000153460.c.b.c.a #37 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 ENSGT00940000155028.s ENSGT00950000182865.b.a.b.b.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 43 ENSGT00390000006492 ENSGT00940000164144.c ENSGT00940000165070.f.a.a ENSGT00940000164372.b ENSGT00940000160686.b ENSGT00940000154400.x.a ENSGT00940000155075.a.b.k ENSGT00940000157256.e ENSGT00950000182887.C.b.b.b.d ENSGT00940000166245.a ENSGT01030000234621.C.a.a.a.b ENSGT00940000162359 #17 ENSGT00940000158878.k #19 ENSGT00940000156974.e.a.b #20 ENSGT00940000166780.c ENSGT00940000162313.a.c #22 ENSGT00940000165969.a ENSGT00940000160788.k #24 ENSGT00940000162539.b #25 ENSGT00940000163390.i #26 ENSGT00940000165126.f ENSGT00940000158723.f #28 ENSGT00510000051633.b ENSGT01100000263502.A.a.a.a.a.a.b ENSGT00950000182941.b.a.i #35 ENSGT00940000154833.b.b #36 ENSGT00940000153460.c.b.c.a.f #37 ENSGT00510000047104.f ENSGT00390000016655.a.b.d ENSGT00940000155266.q ENSGT00390000015476.h Goldfish MODERN SPECIES 5 TEX11 (ENSCARG00000068887) kdrl (ENSCARG00000068932) cdx4 (ENSCARG00000069012) chic1 (ENSCARG00000069023) lnx2b (ENSCARG00000069027) slc25a43 (ENSCARG00000069034) slc25a5 (ENSCARG00000069040) ube2a (ENSCARG00000029286) nkrf (ENSCARG00000029300) arr3b (ENSCARG00000029334) inppl1b (ENSCARG00000030264) P2RY4 (ENSCARG00000030353) ATP11C (ENSCARG00000030385) #19 MCF2 (ENSCARG00000030688) #20 f9a (ENSCARG00000030864) fgf13a (ENSCARG00000030896) #22 zic6 (ENSCARG00000030960) zic3 (ENSCARG00000030974) #24 GPR101 (ENSCARG00000030988) #25 ENSCARG00000031036 #26 rbmx (ENSCARG00000031601) ENSCARG00000031717 #28 cd40lg (ENSCARG00000032623) tmtops3a (ENSCARG00000032643) MAP7D3 (ENSCARG00000032659) #35 fhl1a (ENSCARG00000032792) #36 slc9a6a (ENSCARG00000033038) #37 mmgt1 (ENSCARG00000037605) ints6l (ENSCARG00000037947) mospd1 (ENSCARG00000040770) pabir2 (ENSCARG00000040783) Cyprininae_a ANCESTRAL SPECIES 97 ENSGT00940000164372.b ENSGT00940000160686.b ENSGT00940000154400.x.a ENSGT00940000155075.a.b.k ENSGT00940000154400.y ENSGT00940000166047 ENSGT00940000155075.a.b.l ENSGT00940000157256.e ENSGT00950000182887.C.b.b.b.d ENSGT00940000166245.a ENSGT01030000234621.C.a.a.a.b ENSGT00940000162359 #17 ENSGT00940000158878.k #19 ENSGT00940000156974.e.a.b #20 ENSGT00940000166780.c ENSGT00940000162313.a.c #22 ENSGT00940000165969.a ENSGT00940000160788.k #24 ENSGT00940000162539.b #25 ENSGT00940000163390.i #26 ENSGT00940000165126.f ENSGT00940000158723.f #28 ENSGT00510000051633.b ENSGT01100000263502.A.a.a.a.a.a.b ENSGT00950000182941.b.a.i #35 ENSGT00940000154833.b.b #36 ENSGT00940000153460.c.b.c.a.f #37 ENSGT00510000047104.f ENSGT00390000016655.a.b.d ENSGT00940000155266.q ENSGT00390000015476.h Common carp reference MODERN SPECIES 35 cdx4 (ENSCCRG00000002545) chic1 (ENSCCRG00000071557) lnx2b (ENSCCRG00000072435) slc25a43 (ENSCCRG00000002602) SLC25A5 (ENSCCRG00000052840) ENSCCRG00000080570 ube2a (ENSCCRG00000063660) nkrf (ENSCCRG00000057111) arr3b (ENSCCRG00000002961) inppl1b (ENSCCRG00000042493) ENSCCRG00000041106 sox3 (ENSCCRG00000070313) #17 ATP11C (ENSCCRG00000050240) #19 f9a (ENSCCRG00000037119) ENSCCRG00000078559 fgf13a (ENSCCRG00000053859) #22 zic6 (ENSCCRG00000041841) zic3 (ENSCCRG00000043764) #24 ENSCCRG00000041992 #25 ENSCCRG00000006205 #26 rbmx (ENSCCRG00000006089) ENSCCRG00000007280 #28 cd40lg (ENSCCRG00000063076) tmtops3a (ENSCCRG00000007271) si:dkeyp-11e3.1 (ENSCCRG00000019099) MAP7D3 (ENSCCRG00000031214) #35 fhl1a (ENSCCRG00000079180) #36 slc9a6a (ENSCCRG00000031215) #37 ints6l (ENSCCRG00000038769) mospd1 (ENSCCRG00000003794) pabir2 (ENSCCRG00000055756) Golden-line barbel MODERN SPECIES 298 f9a (ENSSGRG00000029475) fgf13a (ENSSGRG00000029443) #22 zic6 (ENSSGRG00000029442) zic3 (ENSSGRG00000029441) #24 GPR101 (ENSSGRG00000029440) #25 ENSSGRG00000029127 #26 rbmx (ENSSGRG00000029122) ENSSGRG00000028960 #28 cd40lg (ENSSGRG00000028958) tmtops3a (ENSSGRG00000028957) ENSSGRG00000028956 MAP7D3 (ENSSGRG00000028954) #35 fhl1a (ENSSGRG00000028950) #36 ENSSGRG00000028948 #36 slc9a6a (ENSSGRG00000028699) #37 mmgt1 (ENSSGRG00000028696) ints6l (ENSSGRG00000028117) Cyprininae ANCESTRAL SPECIES 89 ENSGT00390000003601.a.d ENSGT00940000164372.a ENSGT00940000160686.a ENSGT00940000154400.x.b ENSGT00940000154400.y ENSGT00940000166047 ENSGT00940000155075.a.b.l ENSGT00940000157256.f ENSGT00950000182887.C.b.b.b.c ENSGT00940000166245.b ENSGT01030000234621.C.a.a.a.a ENSGT00940000158878.l #19 ENSGT00940000156974.e.a.a #20 ENSGT00940000166780.d ENSGT00940000163347 ENSGT00940000162313.a.d #22 ENSGT00940000165969.b ENSGT00940000160788.l #24 ENSGT00940000162539.a #25 ENSGT00940000163390.j #26 ENSGT00940000165126.e ENSGT00940000158723.e #28 ENSGT00510000051633.a ENSGT01100000263502.A.a.a.a.a.a.a ENSGT00390000011545 ENSGT00940000155621.q ENSGT00950000182941.b.a.j #35 ENSGT00940000154833.b.a #36 ENSGT00940000153460.c.b.c.a.e #37 ENSGT00510000047104.e ENSGT00390000016655.a.b.c Cyprininae_a ANCESTRAL SPECIES 50 ENSGT00940000159625.b ENSGT00940000159565.w.b ENSGT00940000164144.d ENSGT00940000165070.f.a.b ENSGT00390000003601.a.d.c ENSGT00940000164372.a ENSGT00940000160686.a ENSGT00940000154622.a.b ENSGT00940000157256.f ENSGT00950000182887.C.b.b.b.c ENSGT00940000166245.b ENSGT01030000234621.C.a.a.a.a ENSGT00940000158878.l #19 ENSGT00940000156974.e.a.a #20 ENSGT00940000166780.d ENSGT00940000162313.a.d #22 ENSGT00940000165969.b ENSGT00940000160788.l #24 ENSGT00940000162539.a #25 ENSGT00940000163390.j #26 ENSGT00940000165126.e ENSGT00940000158723.e #28 ENSGT00510000051633.a ENSGT01100000263502.A.a.a.a.a.a.a ENSGT00390000011545 ENSGT00940000155621.q ENSGT00950000182941.b.a.j #35 ENSGT00940000154833.b.a #36 ENSGT00940000153460.c.b.c.a.e #37 ENSGT00510000047104.e ENSGT00390000016655.a.b.c Common carp reference MODERN SPECIES 20 ENSCCRG00000054295 ENSCCRG00000075092 kdrl (ENSCCRG00000049943) cdx4 (ENSCCRG00000004041) chic1 (ENSCCRG00000002562) lnx2b (ENSCCRG00000079736) slc25a43 (ENSCCRG00000074354) ENSCCRG00000002644 nkrf (ENSCCRG00000002873) arr3b (ENSCCRG00000041132) inppl1b (ENSCCRG00000041102) ENSCCRG00000079774 ENSCCRG00000037256 #19 MCF2 (ENSCCRG00000037121) #20 f9a (ENSCCRG00000080172) fgf13a (ENSCCRG00000066025) #22 zic6 (ENSCCRG00000043791) zic3 (ENSCCRG00000056558) #24 ENSCCRG00000007293 #25 ENSCCRG00000081293 #26 ENSCCRG00000065042 #28 cd40lg (ENSCCRG00000061756) tmtops3a (ENSCCRG00000019103) MAP7D3 (ENSCCRG00000014758) #35 fhl1a (ENSCCRG00000031208) #36 slc9a6a (ENSCCRG00000040549) #37 mmgt1 (ENSCCRG00000039953) ints6l (ENSCCRG00000039981) mospd1 (ENSCCRG00000040532) pabir2 (ENSCCRG00000071174) hprt1 (ENSCCRG00000069043) Golden-line barbel MODERN SPECIES 22 cdx4 (ENSSGRG00000030241) chic1 (ENSSGRG00000030242) lnx2b (ENSSGRG00000030244) slc25a43 (ENSSGRG00000030247) slc25a5 (ENSSGRG00000030251) ube2a (ENSSGRG00000030264) ube2a (ENSSGRG00000030307) nkrf (ENSSGRG00000030308) inppl1b (ENSSGRG00000030311) P2RY4 (ENSSGRG00000030312) ATP11C (ENSSGRG00000030340) #19 MCF2 (ENSSGRG00000031948) #20 ENSSGRG00000031964 f9a (ENSSGRG00000031966) ENSSGRG00000031971 fgf13a (ENSSGRG00000031978) #22 zic6 (ENSSGRG00000032027) zic3 (ENSSGRG00000032028) #24 GPR101 (ENSSGRG00000032030) #25 ENSSGRG00000032047 #26 rbmx (ENSSGRG00000033099) ENSSGRG00000033103 #28 ENSSGRG00000033243 tmtops3a (ENSSGRG00000033244) si:dkeyp-11e3.1 (ENSSGRG00000033245) ENSSGRG00000033246 MAP7D3 (ENSSGRG00000033249) #35 fhl1a (ENSSGRG00000033251) #36 slc9a6a (ENSSGRG00000033283) #37 mmgt1 (ENSSGRG00000034753) ints6l (ENSSGRG00000034759) Zebrafish MODERN SPECIES 5 kdrl (ENSDARG00000105215) cdx4 (ENSDARG00000036292) chic1 (ENSDARG00000053166) lnx2b (ENSDARG00000071478) slc25a43 (ENSDARG00000102048) slc25a5 (ENSDARG00000092553) ENSDARG00000105424 ube2a (ENSDARG00000098466) nkrf (ENSDARG00000100536) arr3b (ENSDARG00000098475) inppl1b (ENSDARG00000001442) sox3 (ENSDARG00000053569) #17 ATP11C (ENSDARG00000036442) #19 MCF2 (ENSDARG00000022895) #20 f9a (ENSDARG00000010097) fgf13a (ENSDARG00000035056) #22 ENSDARG00000099621 zic6 (ENSDARG00000071496) zic3 (ENSDARG00000071497) #24 GPR101 (ENSDARG00000039218) #25 ENSDARG00000034943 #26 rbmx (ENSDARG00000014244) ENSDARG00000006683 #28 cd40lg (ENSDARG00000079333) tmtops3a (ENSDARG00000036460) si:dkeyp-11e3.1 (ENSDARG00000102058) ENSDARG00000105416 MAP7D3 (ENSDARG00000060771) #35 fhl1a (ENSDARG00000071498) #36 slc9a6a (ENSDARG00000009209) #37 mmgt1 (ENSDARG00000010553) Osteoglossiformes ANCESTRAL SPECIES 446 ENSGT00940000162359.b #17 ENSGT00940000158878.m #19 ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.a #22 ENSGT00940000165969.f ENSGT00940000160788 #24 ENSGT00940000165126.c Asian bonytongue MODERN SPECIES 5 ube2a (ENSSFOG00015010996) slc25a5 (ENSSFOG00015011507) lnx2b (ENSSFOG00015010918) ENSSFOG00015010948 CHIC1 (ENSSFOG00015028087) ENSSFOG00015010988 kdrl (ENSSFOG00015011030) DLG3 (ENSSFOG00015011147) ENSSFOG00015031649 rab41 (ENSSFOG00015031407) arr3a (ENSSFOG00015011313) sox3 (ENSSFOG00015011340) #17 ATP11C (ENSSFOG00015011500) #19 MCF2 (ENSSFOG00015011622) #20 f9b (ENSSFOG00015011687) #21 fgf13a (ENSSFOG00015011700) #22 ENSSFOG00015011719 ZIC3 (ENSSFOG00015011731) #24 rbmx (ENSSFOG00015011749) ENSSFOG00015011823 #28 cd40lg (ENSSFOG00015027884) tmtops3b (ENSSFOG00015027635) ENSSFOG00015012041 ENSSFOG00015012126 #35 fhl1b (ENSSFOG00015024485) #36 slc9a6b (ENSSFOG00015012242) #37 mmgt1 (ENSSFOG00015032688) ints6l (ENSSFOG00015012281) mospd1 (ENSSFOG00015012317) pabir2 (ENSSFOG00015026600) hprt1 (ENSSFOG00015012378) Osteoglossocephalai ANCESTRAL SPECIES 19 ENSGT00940000175781 ENSGT00940000159625 ENSGT00940000177072 ENSGT00940000153222.a.b.b.b.b ENSGT00940000165821 ENSGT00940000163684 ENSGT00950000182887.C.b.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000162359 #17 ENSGT00940000158878 #19 ENSGT00940000156974.e.a #20 ENSGT00940000166780 ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00940000163347 ENSGT00940000165969 ENSGT00940000160788 #24 ENSGT00940000162539 #25 ENSGT00940000163390 #26 ENSGT00940000165126 ENSGT00940000158723 #28 ENSGT00510000051633 ENSGT01100000263502.A.a.a.a.a.a ENSGT00390000011545 ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT01030000234935 ENSGT00950000182941.b.a #35 ENSGT00940000154833.a #36 Clupeocephala ANCESTRAL SPECIES 282 ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605 ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000157436.b ENSGT00940000165459.a.a.b ENSGT00390000007335 ENSGT00940000155078.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 Otomorpha ANCESTRAL SPECIES 192 ENSGT01100000263938 ENSGT00390000017253 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00940000180813 ENSGT00390000001738 ENSGT00530000063721.B ENSGT00940000155078.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00940000175097 ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT01030000234935.c.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 Otophysi ANCESTRAL SPECIES 166 ENSGT00390000000417.a.a.b.a.a ENSGT00940000180813 ENSGT00390000001738 ENSGT00530000063721.B ENSGT00390000004124.j ENSGT00950000183050.b.b.b.a.b.b ENSGT00940000155078.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00980000199573 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00940000175097 ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT01030000234935.c.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 Characiphysae ANCESTRAL SPECIES 135 ENSGT01030000234773 ENSGT01100000263938 ENSGT00390000017253 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00390000001738 ENSGT00530000063721.B ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00980000199573 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00940000175097 ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT01030000234935.c.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309 ENSGT00940000160378.jb ENSGT00940000155288.b ENSGT00940000155312.b ENSGT00390000016686 ENSGT00390000009588 ENSGT00390000015123 ENSGT00530000063764.a Channel catfish MODERN SPECIES 7 EHD1 (ENSIPUG00000017390) wdr74 (ENSIPUG00000017445) cnih2 (ENSIPUG00000017492) tm7sf2 (ENSIPUG00000017507) znhit2 (ENSIPUG00000017558) MRPL49 (ENSIPUG00000017564) vps51 (ENSIPUG00000017591) frmd8 (ENSIPUG00000017614) ENSIPUG00000017628 sssca1 (ENSIPUG00000017677) ENSIPUG00000017694 arr3a (ENSIPUG00000017703) MCF2 (ENSIPUG00000017747) #20 ENSIPUG00000017784 f9 (ENSIPUG00000017794) #21 fgf13b (ENSIPUG00000017812) #22 htatsf1 (ENSIPUG00000017828) #32 ENSIPUG00000017861 ENSIPUG00000017876 fhl1b (ENSIPUG00000017882) #36 slc9a6b (ENSIPUG00000017899) #37 il2rga (ENSIPUG00000018142) RYR1 (ENSIPUG00000018158) zgc:153345 (ENSIPUG00000018316) mdh2 (ENSIPUG00000018344) ska2 (ENSIPUG00000018430) ENSIPUG00000018463 C2CD2 (ENSIPUG00000018475) ENSIPUG00000018510 ENSIPUG00000018525 tbl2 (ENSIPUG00000018533) Characiphysae_b ANCESTRAL SPECIES 79 ENSGT01030000234773 ENSGT01100000263938 ENSGT00390000017253 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00390000001738 ENSGT00530000063721.B ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00980000199573 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00940000175097 ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT01030000234935.c.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309 ENSGT00940000160378.jb ENSGT00940000155288.b ENSGT00940000155312.b ENSGT00390000016686 ENSGT00390000009588 ENSGT00390000015123 ENSGT00530000063764.a Characoidei ANCESTRAL SPECIES 40 ENSGT00950000182834.A.a.b.d ENSGT01100000266173 ENSGT01100000263938 ENSGT00390000017253 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00390000001738 ENSGT00530000063721.B ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00980000199573 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00940000175097 ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT01030000234935.c.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000155312.b ENSGT00390000016686 ENSGT00390000009588 ENSGT00390000015123 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00390000013836 ENSGT00390000002172.A.a.e Red-bellied piranha MODERN SPECIES 653 slc9a6b (ENSPNAG00000029175) #37 fhl1b (ENSPNAG00000029092) #36 ENSPNAG00000029044 ENSPNAG00000004494 ENSPNAG00000005229 arr3a (ENSPNAG00000028769) MCF2 (ENSPNAG00000028745) #20 ENSPNAG00000028675 f9b (ENSPNAG00000028661) #21 fgf13b (ENSPNAG00000028647) #22 tmtops3b (ENSPNAG00000004983) ENSPNAG00000028609 htatsf1 (ENSPNAG00000006166) #32 znrd2 (ENSPNAG00000028506) FAM89B (ENSPNAG00000028466) ENSPNAG00000028434 ENSPNAG00000006533 frmd8 (ENSPNAG00000006384) vps51 (ENSPNAG00000028288) znhit2 (ENSPNAG00000005616) tm7sf2 (ENSPNAG00000028182) MRPL49 (ENSPNAG00000004978) faub (ENSPNAG00000028113) ENSPNAG00000004303 uqcc3 (ENSPNAG00000004301) Mexicana tetra MODERN SPECIES 12 ENSAMXG00000003243 ENSAMXG00000035107 ENSAMXG00000033320 ENSAMXG00000039911 ENSAMXG00000031901 ENSAMXG00000036684 ENSAMXG00000029757 ENSAMXG00000030629 ENSAMXG00000003307 ENSAMXG00000003283 or41a2 (ENSAMXG00000039997) ENSAMXG00000003333 ENSAMXG00000030301 #20 ENSAMXG00000031321 f9b (ENSAMXG00000035231) #21 fgf13b (ENSAMXG00000032800) #22 ENSAMXG00000041072 htatsf1 (ENSAMXG00000008387) #32 ENSAMXG00000008419 ENSAMXG00000038650 fhl1b (ENSAMXG00000032193) #36 slc9a6b (ENSAMXG00000008466) #37 ENSAMXG00000008481 il2rga (ENSAMXG00000036309) RYR1 (ENSAMXG00000008578) zgc:153345 (ENSAMXG00000008721) ENSAMXG00000043469 mdh2 (ENSAMXG00000038918) ska2 (ENSAMXG00000008739) ENSAMXG00000008742 ENSAMXG00000008752 Electric eel MODERN SPECIES 7 cnih2 (ENSEEEG00000010327) ENSEEEG00000010326 ENSEEEG00000010324 MRPL49 (ENSEEEG00000010323) znhit2 (ENSEEEG00000010322) ENSEEEG00000010321 vps51 (ENSEEEG00000010246) frmd8 (ENSEEEG00000010243) ENSEEEG00000010242 FAM89B (ENSEEEG00000010241) znrd2 (ENSEEEG00000010239) ENSEEEG00000010236 arr3a (ENSEEEG00000010098) MCF2 (ENSEEEG00000010090) #20 f9b (ENSEEEG00000010087) #21 fgf13b (ENSEEEG00000010074) #22 htatsf1 (ENSEEEG00000010070) #32 ENSEEEG00000010068 fhl1b (ENSEEEG00000010067) #36 slc9a6b (ENSEEEG00000008902) #37 il2rga (ENSEEEG00000008889) RYR1 (ENSEEEG00000008884) zgc:153345 (ENSEEEG00000008880) mdh2 (ENSEEEG00000008419) ska2 (ENSEEEG00000008401) ENSEEEG00000008398 ENSEEEG00000008397 ENSEEEG00000008396 PRDM15 (ENSEEEG00000008381) Cyprinoidei ANCESTRAL SPECIES 6 ENSGT00950000182834.A.a.b.d ENSGT01030000234773 ENSGT01100000263938 ENSGT00390000017253 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00940000180813 ENSGT00390000001738 ENSGT00530000063721.B ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00980000199573 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00940000175097 ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000157964 ENSGT00950000183096.a.a.c.b.e ENSGT00940000163671.a.b ENSGT00950000183040.A.a.c.b ENSGT00940000155128.a.a.a.b ENSGT00940000158173.e ENSGT00940000166566 ENSGT00940000155313.g.a ENSGT00390000010391 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 128 ENSGT00950000182834.A.a.b.d.e ENSGT01030000234773.a ENSGT00390000007479.j.b ENSGT00390000017253.x ENSGT00390000017147.b ENSGT00390000000417.a.a.b.a.a ENSGT00390000001738.a ENSGT00530000063721.B.a ENSGT00940000155078.b.e.b ENSGT00940000157597.f ENSGT00940000153370.a.a.c ENSGT00390000013169.a ENSGT00950000182887.C.b.b.a.b ENSGT00940000156974.e.b.a #20 ENSGT00940000159516.e #21 ENSGT00940000162313.b.a #22 ENSGT00940000159516.f #21 ENSGT00940000162313.b.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00390000009902.b #32 ENSGT00940000175097 ENSGT00390000009902.a #32 ENSGT00940000156341.e.a ENSGT00940000154833.a.b #36 ENSGT00940000153460.c.b.c.b.c #37 ENSGT00940000157964.m ENSGT00950000183096.a.a.c.b.e.a ENSGT00940000163671.a.b.a.b ENSGT00950000183040.A.a.c.b.b ENSGT00940000155128.a.a.a.b.a ENSGT00940000158173.e.b Cyprininae_a ANCESTRAL SPECIES 102 ENSGT01030000234773.a ENSGT00390000007479.j.b ENSGT01100000263938.b ENSGT00390000017253.x ENSGT00390000017147.b ENSGT00390000000417.a.a.b.a.a ENSGT00390000001738.a ENSGT00530000063721.B.a ENSGT00940000155078.b.e.b ENSGT00940000157597.f.d ENSGT00940000153370.a.a.c ENSGT00390000013169.a ENSGT00950000182887.C.b.b.a.b ENSGT00940000156974.e.b.a #20 ENSGT00940000159516.e #21 ENSGT00940000162313.b.a #22 ENSGT01100000263502.A.a.a.a.a.b.b ENSGT00940000175097 ENSGT00390000009902.a #32 ENSGT00940000156341.e.a ENSGT00940000154833.a.b #36 ENSGT00940000153460.c.b.c.b.c #37 ENSGT00940000157964.m ENSGT00950000183096.a.a.c.b.e.a ENSGT00940000163671.a.b.a.b ENSGT00950000183040.A.a.c.b.b ENSGT00940000155128.a.a.a.b.a ENSGT00940000158173.e.b ENSGT00940000166566.b ENSGT00940000155313.g.a.b ENSGT00390000010391.b Common carp reference MODERN SPECIES 24 wdr74 (ENSCCRG00000024922) cnih2 (ENSCCRG00000078329) faub (ENSCCRG00000022403) ENSCCRG00000065160 ENSCCRG00000022401 znhit2 (ENSCCRG00000074415) vps51 (ENSCCRG00000018372) frmd8 (ENSCCRG00000023247) rab1bb (ENSCCRG00000018440) ENSCCRG00000023588 ENSCCRG00000057734 znrd2 (ENSCCRG00000072688) arr3a (ENSCCRG00000021275) MCF2 (ENSCCRG00000021236) #20 f9b (ENSCCRG00000067620) #21 fgf13b (ENSCCRG00000064608) #22 tmtops3b (ENSCCRG00000025258) ENSCCRG00000076698 htatsf1 (ENSCCRG00000057796) #32 ENSCCRG00000025263 fhl1b (ENSCCRG00000025268) #36 slc9a6b (ENSCCRG00000025285) #37 synj1 (ENSCCRG00000035105) ENSCCRG00000070682 ENSCCRG00000078811 arfip2b (ENSCCRG00000079935) fhdc3 (ENSCCRG00000036002) trim3b (ENSCCRG00000036013) trim47 (ENSCCRG00000036034) frem2a (ENSCCRG00000079281) ufm1 (ENSCCRG00000056965) Golden-line barbel MODERN SPECIES 355 faub (ENSSGRG00000002221) ENSSGRG00000002226 MRPL49 (ENSSGRG00000002220) znhit2 (ENSSGRG00000002218) tm7sf2 (ENSSGRG00000002213) vps51 (ENSSGRG00000001813) frmd8 (ENSSGRG00000001769) rab1bb (ENSSGRG00000001534) FAM89B (ENSSGRG00000051603) znrd2 (ENSSGRG00000051602) ENSSGRG00000051601 ENSSGRG00000051600 arr3a (ENSSGRG00000051515) MCF2 (ENSSGRG00000051514) #20 f9b (ENSSGRG00000051513) #21 fgf13b (ENSSGRG00000051512) #22 tmtops3b (ENSSGRG00000051511) htatsf1 (ENSSGRG00000051490) #32 fhl1b (ENSSGRG00000051484) #36 slc9a6b (ENSSGRG00000051454) #37 synj1 (ENSSGRG00000051169) ENSSGRG00000051158 ENSSGRG00000051157 ENSSGRG00000051155 pigx (ENSSGRG00000051154) ENSSGRG00000051153 ing5a (ENSSGRG00000051151) ENSSGRG00000051150 lmnb2 (ENSSGRG00000050951) rpl36 (ENSSGRG00000050941) LONP1 (ENSSGRG00000050916) Goldfish MODERN SPECIES 1 cnih2 (ENSCARG00000017968) ENSCARG00000017982 ENSCARG00000017996 faub (ENSCARG00000018011) MRPL49 (ENSCARG00000018033) znhit2 (ENSCARG00000018039) vps51 (ENSCARG00000018053) frmd8 (ENSCARG00000018111) rab1bb (ENSCARG00000018196) ENSCARG00000018232 FAM89B (ENSCARG00000018492) znrd2 (ENSCARG00000049749) arr3a (ENSCARG00000049877) MCF2 (ENSCARG00000050446) #20 f9b (ENSCARG00000050552) #21 fgf13b (ENSCARG00000050606) #22 ENSCARG00000050776 htatsf1 (ENSCARG00000050818) #32 fhl1b (ENSCARG00000050871) #36 slc9a6b (ENSCARG00000050912) #37 synj1 (ENSCARG00000051958) SLC46A3 (ENSCARG00000053408) ENSCARG00000053418 ENSCARG00000053447 arfip2b (ENSCARG00000053613) fhdc3 (ENSCARG00000053762) trim3b (ENSCARG00000053871) trim47 (ENSCARG00000054815) frem2a (ENSCARG00000054841) ENSCARG00000054919 ufm1 (ENSCARG00000054939) Cyprininae ANCESTRAL SPECIES 128 ENSGT00390000007479.j.b ENSGT00390000017253.x ENSGT00390000017147.b ENSGT00390000000417.a.a.b.a.a ENSGT00390000001738.a ENSGT00530000063721.B.a ENSGT00940000155078.b.e.b ENSGT00940000157597.f ENSGT00940000153370.a.a.c ENSGT00390000013169.a ENSGT00950000182887.C.b.b.a.b ENSGT00940000156974.e.b.a #20 ENSGT00940000159516.e #21 ENSGT00940000162313.b.a #22 ENSGT00940000159516.f #21 ENSGT00940000162313.b.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00390000009902.b #32 ENSGT00940000175097 ENSGT00390000009902.a #32 ENSGT00940000156341.e.a ENSGT00940000154833.a.b #36 ENSGT00940000153460.c.b.c.b.c #37 ENSGT00940000157964.m ENSGT00950000183096.a.a.c.b.e.a ENSGT00940000163671.a.b.a.b ENSGT00950000183040.A.a.c.b.b ENSGT00940000155128.a.a.a.b.a ENSGT00940000158173.e.b ENSGT00940000166566.b ENSGT00940000155313.g.a.b Goldfish DUPLICATION Goldfish MODERN SPECIES 309 ENSCARG00000063099 arr3a (ENSCARG00000063115) ENSCARG00000063179 #20 f9b (ENSCARG00000063190) #21 fgf13b (ENSCARG00000063201) #22 Goldfish MODERN SPECIES 28 ehd1b (ENSCARG00000007667) wdr74 (ENSCARG00000007643) cnih2 (ENSCARG00000007632) faub (ENSCARG00000007624) MRPL49 (ENSCARG00000007615) znhit2 (ENSCARG00000007612) tm7sf2 (ENSCARG00000007042) vps51 (ENSCARG00000006794) frmd8 (ENSCARG00000006664) rab1bb (ENSCARG00000006629) EHBP1L1 (ENSCARG00000006567) FAM89B (ENSCARG00000006533) znrd2 (ENSCARG00000006509) arr3a (ENSCARG00000006392) f9b (ENSCARG00000006372) #21 fgf13b (ENSCARG00000006311) #22 tmtops3b (ENSCARG00000006265) fhl1b (ENSCARG00000006249) #36 slc9a6b (ENSCARG00000005966) #37 synj1 (ENSCARG00000018131) SLC46A3 (ENSCARG00000018028) ENSCARG00000017771 ENSCARG00000017740 arfip2b (ENSCARG00000017700) fhdc3 (ENSCARG00000017668) trim3b (ENSCARG00000017644) trim47 (ENSCARG00000017627) frem2a (ENSCARG00000017285) ufm1 (ENSCARG00000017249) trpc4a (ENSCARG00000017216) POSTN (ENSCARG00000017106) Cyprininae_a ANCESTRAL SPECIES 132 ENSGT01030000234773.b ENSGT01100000263938.a.a ENSGT00390000007479.j.a ENSGT00390000017147.a ENSGT00940000180813 ENSGT00390000001738.b ENSGT00530000063721.B.b ENSGT00940000155078.b.e.a ENSGT00940000157597.f.c ENSGT00940000153370.a.a.d ENSGT00390000013169.b ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a.a ENSGT00940000156974.e.b.b #20 ENSGT00940000159516.f #21 ENSGT00940000162313.b.b #22 ENSGT01100000263502.A.a.a.a.a.b.a ENSGT00390000009902.b #32 ENSGT00940000154833.a.a #36 ENSGT00940000153460.c.b.c.b.d #37 ENSGT00940000157964.n ENSGT00950000183096.a.a.c.b.e.b ENSGT00940000163671.a.b.a.a ENSGT00950000183040.A.a.c.b.a ENSGT00940000155128.a.a.a.b.b ENSGT00940000158173.e.a ENSGT00940000166566.a ENSGT00940000155313.g.a.a ENSGT00390000010391.a ENSGT01060000248594.e.b.b.b ENSGT01090000260029.a.a.b.a.a.c.a.b Common carp reference MODERN SPECIES 32 ENSCCRG00000059844 faub (ENSCCRG00000025151) znhit2 (ENSCCRG00000064969) vps51 (ENSCCRG00000025167) frmd8 (ENSCCRG00000018385) ENSCCRG00000023552 rab1bb (ENSCCRG00000023555) ENSCCRG00000068888 ENSCCRG00000068183 ENSCCRG00000023765 znrd2 (ENSCCRG00000023768) ENSCCRG00000021264 arr3a (ENSCCRG00000018567) MCF2 (ENSCCRG00000033673) #20 f9b (ENSCCRG00000033678) #21 fgf13b (ENSCCRG00000073220) #22 tmtops3b (ENSCCRG00000033685) htatsf1 (ENSCCRG00000078834) #32 fhl1b (ENSCCRG00000059262) #36 slc9a6b (ENSCCRG00000033721) #37 synj1 (ENSCCRG00000025632) ENSCCRG00000035790 ENSCCRG00000036055 arfip2b (ENSCCRG00000076412) fhdc3 (ENSCCRG00000057263) trim3b (ENSCCRG00000036065) trim47 (ENSCCRG00000036902) frem2a (ENSCCRG00000080619) ENSCCRG00000052246 ufm1 (ENSCCRG00000074118) trpc4a (ENSCCRG00000037079) Golden-line barbel MODERN SPECIES 525 ENSSGRG00000038012 ENSSGRG00000038014 faub (ENSSGRG00000038016) znhit2 (ENSSGRG00000038026) tm7sf2 (ENSSGRG00000038028) ENSSGRG00000038031 vps51 (ENSSGRG00000038034) frmd8 (ENSSGRG00000038078) rab1bb (ENSSGRG00000038084) ENSSGRG00000038169 znrd2 (ENSSGRG00000038174) ENSSGRG00000038175 arr3a (ENSSGRG00000038176) MCF2 (ENSSGRG00000038190) #20 f9b (ENSSGRG00000038196) #21 fgf13b (ENSSGRG00000038197) #22 tmtops3b (ENSSGRG00000038199) htatsf1 (ENSSGRG00000038201) #32 ENSSGRG00000038208 fhl1b (ENSSGRG00000038210) #36 slc9a6b (ENSSGRG00000038211) #37 synj1 (ENSSGRG00000038237) SLC46A3 (ENSSGRG00000039297) ENSSGRG00000039298 arfip2b (ENSSGRG00000039301) fhdc3 (ENSSGRG00000039399) trim3b (ENSSGRG00000039412) trim47 (ENSSGRG00000039636) frem2a (ENSSGRG00000039641) ufm1 (ENSSGRG00000039826) trpc4a (ENSSGRG00000039827) Zebrafish MODERN SPECIES 1 MRPL49 (ENSDARG00000075422) znhit2 (ENSDARG00000030805) tm7sf2 (ENSDARG00000032816) vps51 (ENSDARG00000062016) frmd8 (ENSDARG00000073696) ENSDARG00000088927 rab1bb (ENSDARG00000056479) ENSDARG00000079895 FAM89B (ENSDARG00000069106) znrd2 (ENSDARG00000069109) ENSDARG00000077622 arr3a (ENSDARG00000056511) MCF2 (ENSDARG00000056603) #20 ENSDARG00000097371 f9b (ENSDARG00000029493) #21 fgf13b (ENSDARG00000056633) #22 tmtops3b (ENSDARG00000090629) ENSDARG00000095400 htatsf1 (ENSDARG00000056649) #32 ENSDARG00000094386 fhl1b (ENSDARG00000056653) #36 slc9a6b (ENSDARG00000075382) #37 synj1 (ENSDARG00000025011) SLC46A3 (ENSDARG00000079933) ENSDARG00000079850 arfip2b (ENSDARG00000056664) fhdc3 (ENSDARG00000069129) trim3b (ENSDARG00000005397) trim47 (ENSDARG00000056678) frem2a (ENSDARG00000076856) ufm1 (ENSDARG00000043857) Clupeiformes ANCESTRAL SPECIES 167 ENSGT01100000263938 ENSGT00390000017253 ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a ENSGT00390000001738 ENSGT00530000063721.B ENSGT00940000155078.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a.c ENSGT00950000182887.C.b.b.a.d ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00940000175097 ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT01030000234935.c.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 Denticle herring MODERN SPECIES 16 RAD50 (ENSDCDG00000034984) drd1b (ENSDCDG00000035021) msx2b (ENSDCDG00000035023) nsg2 (ENSDCDG00000035028) CPEB4 (ENSDCDG00000035030) bod1 (ENSDCDG00000035040) STC2 (ENSDCDG00000035041) BNIP1 (ENSDCDG00000035042) CREBRF (ENSDCDG00000035043) ATP6V0E1 (ENSDCDG00000035045) ENSDCDG00000035048 arr3a (ENSDCDG00000035053) arr3a (ENSDCDG00000035075) MCF2 (ENSDCDG00000035122) #20 f9b (ENSDCDG00000035203) #21 fgf13b (ENSDCDG00000035205) #22 tmtops3b (ENSDCDG00000035213) ENSDCDG00000035221 htatsf1 (ENSDCDG00000035222) #32 ENSDCDG00000035224 ENSDCDG00000035227 fhl1b (ENSDCDG00000013940) #36 txndc15 (ENSDCDG00000013961) zgc:77058 (ENSDCDG00000013989) ddx46 (ENSDCDG00000014133) msna (ENSDCDG00000015436) fdx1b (ENSDCDG00000019095) ENSDCDG00000019097 ENSDCDG00000019110 ENSDCDG00000019200 AR (ENSDCDG00000019212) Atlantic herring MODERN SPECIES 24 GRIK1 (ENSCHAG00000018442) TIAM1 (ENSCHAG00000018070) sod1 (ENSCHAG00000017872) ENSCHAG00000017829 SLC46A3 (ENSCHAG00000017815) synj1 (ENSCHAG00000016950) cfap298 (ENSCHAG00000016864) ENSCHAG00000016860 ENSCHAG00000016851 trim3b (ENSCHAG00000016622) trim47 (ENSCHAG00000016599) rbm41 (ENSCHAG00000016591) neu3.1 (ENSCHAG00000016580) MCF2 (ENSCHAG00000016562) #20 f9b (ENSCHAG00000016496) #21 fgf13b (ENSCHAG00000016452) #22 tmtops3b (ENSCHAG00000016296) ENSCHAG00000016271 htatsf1 (ENSCHAG00000016240) #32 ENSCHAG00000016221 ENSCHAG00000016137 fhl1b (ENSCHAG00000016125) #36 slc9a6b (ENSCHAG00000015324) #37 hnrnph1l (ENSCHAG00000015173) ENSCHAG00000015132 pfdn1 (ENSCHAG00000015113) slc23a1 (ENSCHAG00000012939) fabp6 (ENSCHAG00000012886) PWWP2A (ENSCHAG00000012878) ttc1 (ENSCHAG00000012861) ADRA1B (ENSCHAG00000012797) Euteleosteomorpha ANCESTRAL SPECIES 231 ENSGT00950000182898.a.a.a.a.a.h ENSGT00940000158605 ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00940000157436.b ENSGT00940000165459.a.a.b ENSGT00390000007335 ENSGT00940000155078.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309 Protacanthopterygii ANCESTRAL SPECIES 83 ENSGT00390000005232 ENSGT00940000159147.b.a ENSGT00940000153968.a.b.b.b.p ENSGT00940000157436.b ENSGT00940000165459.a.a.b ENSGT00390000007335 ENSGT00940000156996.f.a.a ENSGT00940000155078.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT01100000263502.A.a.a.a.a.b ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT00940000154833.a #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 436 ENSGT00950000183209.a.a.b.c.a ENSGT00940000153968.a.b.b.b.p ENSGT00940000157436.b.a ENSGT00940000165459.a.a.b.c ENSGT00390000007335.c ENSGT00940000156996.f.a.a.c ENSGT00940000155078.b ENSGT00940000161027.a.a ENSGT00940000153370.a.a.e ENSGT00390000013169.c ENSGT00950000182887.C.b.b.a.f ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b.c #22 ENSGT00940000160788.m.b #24 ENSGT01100000263502.A.a.a.a.a.b.e ENSGT00390000009902 #32 ENSGT00940000156341.e.a ENSGT00940000154833.a.g.b #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00950000182898.a.a.a.a.a.h.a ENSGT00940000158605.s.a ENSGT00950000183209.a.a.b.c.a ENSGT00940000153968.a.b.b.b.p ENSGT00940000157436.b.a ENSGT00940000165459.a.a.b.c ENSGT00390000007335.c ENSGT00940000156996.f.a.a.c ENSGT00940000155078.b ENSGT00940000161027.a.a ENSGT00940000153370.a.a.e ENSGT00390000013169.c ENSGT00950000182887.C.b.b.a.f ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b.c #22 ENSGT00940000160788.m.b #24 ENSGT01100000263502.A.a.a.a.a.b.e ENSGT00390000009902 #32 ENSGT00940000154833.a.g.a #36 ENSGT00940000153609.a.r.a ENSGT00940000154651.a.g ENSGT00940000158132.n.a ENSGT00940000165121.a.i ENSGT00950000183068.a.a.a.a.c.a ENSGT00950000183118.A.c.b.b ENSGT00940000153763.a.d.a.a ENSGT01000000220566 ENSGT01050000244937.a.b.a.b.c ENSGT00950000182962.a.b.b.c ENSGT01060000248564.b.a.b.b.b.b.e Salmo ANCESTRAL SPECIES 18 ENSGT00950000182898.a.a.a.a.a.h.a ENSGT00940000158605.s.a ENSGT00950000183209.a.a.b.c.a ENSGT00940000153968.a.b.b.b.p ENSGT00940000157436.b.a ENSGT00940000165459.a.a.b.c ENSGT00390000007335.c ENSGT00940000156996.f.a.a.c ENSGT00940000155078.b.c ENSGT00940000161027.a.a ENSGT00940000153370.a.a.e ENSGT00390000013169.c ENSGT00950000182887.C.b.b.a.f ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b.c #22 ENSGT00940000160788.m.b #24 ENSGT01100000263502.A.a.a.a.a.b.e ENSGT00390000009902 #32 ENSGT00940000153609.a.r.a ENSGT00940000154651.a.g ENSGT00940000158132.n.a ENSGT00940000165121.a.i ENSGT00950000183068.a.a.a.a.c.a ENSGT00950000183118.A.c.b.b ENSGT00940000153763.a.d.a.a ENSGT01000000220566 ENSGT01050000244937.a.b.a.b.c ENSGT00950000182962.a.b.b.c ENSGT01060000248564.b.a.b.b.b.b.e ENSGT00530000063000.a.b.a.d Atlantic salmon MODERN SPECIES 23 ENSSSAG00000077534 ENSSSAG00000106220 ENSSSAG00000077531 ENSSSAG00000077445 ENSSSAG00000077268 actn3a (ENSSSAG00000072197) rbm14a (ENSSSAG00000071920) ENSSSAG00000071905 dpp3 (ENSSSAG00000071785) ENSSSAG00000093665 ENSSSAG00000113605 ENSSSAG00000071633 ENSSSAG00000092011 arr3a (ENSSSAG00000069925) ENSSSAG00000069797 #20 fgf13 (ENSSSAG00000069773) #22 f9b (ENSSSAG00000069791) #21 zic3 (ENSSSAG00000107913) #24 tmtops3b (ENSSSAG00000069759) htatsf1 (ENSSSAG00000069756) #32 ENSSSAG00000107972 fhl1 (ENSSSAG00000069744) #36 snx12 (ENSSSAG00000069735) slc7a3a (ENSSSAG00000069327) ENSSSAG00000083632 ENSSSAG00000119437 ENSSSAG00000044616 ENSSSAG00000042198 ENSSSAG00000042049 ENSSSAG00000104813 ENSSSAG00000041948 River trout MODERN SPECIES 10 ENSSTUG00000012194 pacs1a (ENSSTUG00000012208) actn3a (ENSSTUG00000012298) rbm14a (ENSSTUG00000012829) ENSSTUG00000012869 ENSSTUG00000012872 dpp3 (ENSSTUG00000012951) ENSSTUG00000013422 ENSSTUG00000013441 ENSSTUG00000013617 FAM89B (ENSSTUG00000013822) znrd2 (ENSSTUG00000013827) arr3a (ENSSTUG00000013844) MCF2 (ENSSTUG00000014175) #20 f9b (ENSSTUG00000014256) #21 fgf13b (ENSSTUG00000014274) #22 ZIC3 (ENSSTUG00000014312) #24 tmtops3b (ENSSTUG00000014318) htatsf1 (ENSSTUG00000014326) #32 fhl1b (ENSSTUG00000014348) #36 ENSSTUG00000014353 snx12 (ENSSTUG00000014368) slc7a3a (ENSSTUG00000032194) RAB39B (ENSSTUG00000032615) ENSSTUG00000032620 ENSSTUG00000032634 PHKA1 (ENSSTUG00000032925) CLCN5 (ENSSTUG00000034695) ENSSTUG00000036353 ENSSTUG00000036364 ENSSTUG00000036384 Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00950000182898.a.a.a.a.a.h.a ENSGT00940000158605.s.a ENSGT00950000183209.a.a.b.c.a ENSGT00940000153968.a.b.b.b.p ENSGT00940000157436.b.a ENSGT00940000165459.a.a.b.c ENSGT00390000007335.c ENSGT00940000156996.f.a.a.c ENSGT00940000155078.b ENSGT00940000161027.a.a ENSGT00940000153370.a.a.e ENSGT00390000013169.c ENSGT00950000182887.C.b.b.a.f ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b.c #22 ENSGT00940000160788.m.b #24 ENSGT01100000263502.A.a.a.a.a.b.e ENSGT00390000009902 #32 ENSGT00940000154833.a.g.a #36 ENSGT00940000153609.a.r.a ENSGT00940000154651.a.g ENSGT00940000158132.n.a ENSGT00940000165121.a.i ENSGT00950000183068.a.a.a.a.c.a ENSGT00950000183118.A.c.b.b ENSGT00940000153763.a.d.a.a ENSGT01000000220566 ENSGT01050000244937.a.b.a.b.c ENSGT00950000182962.a.b.b.c ENSGT01060000248564.b.a.b.b.b.b.e Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00950000182898.a.a.a.a.a.h.a ENSGT00940000158605.s.a ENSGT00950000183209.a.a.b.c.a ENSGT00940000153968.a.b.b.b.p ENSGT00940000157436.b.a ENSGT00940000165459.a.a.b.c ENSGT00390000007335.c ENSGT00940000156996.f.a.a.c ENSGT00940000155078.b ENSGT00940000161027.a.a ENSGT00940000153370.a.a.e ENSGT00390000013169.c ENSGT00950000182887.C.b.b.a.f ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b.c #22 ENSGT01100000263502.A.a.a.a.a.b.e ENSGT00390000009902 #32 ENSGT00940000154833.a.g.a #36 ENSGT00940000153609.a.r.a ENSGT00940000154651.a.g ENSGT00940000158132.n.a ENSGT00940000165121.a.i ENSGT00950000183068.a.a.a.a.c.a ENSGT00950000183118.A.c.b.b ENSGT00940000153763.a.d.a.a ENSGT01000000220566 Chinook salmon MODERN SPECIES 23 slc29a2 (ENSOTSG00005010664) ENSOTSG00005010668 pacs1a (ENSOTSG00005010673) actn3a (ENSOTSG00005010750) rbm14a (ENSOTSG00005023989) ENSOTSG00005023990 dpp3 (ENSOTSG00005023992) ENSOTSG00005024276 ENSOTSG00005024278 ENSOTSG00005024346 FAM89B (ENSOTSG00005024362) znrd2 (ENSOTSG00005024363) arr3a (ENSOTSG00005024365) MCF2 (ENSOTSG00005025881) #20 f9b (ENSOTSG00005026512) #21 fgf13b (ENSOTSG00005026517) #22 ZIC3 (ENSOTSG00005026519) #24 htatsf1 (ENSOTSG00005026520) #32 ENSOTSG00005026524 #36 snx12 (ENSOTSG00005026528) slc7a3a (ENSOTSG00005026530) RAB39B (ENSOTSG00005002686) ENSOTSG00005002789 ENSOTSG00005002934 ENSOTSG00005003167 CLCN5 (ENSOTSG00005011392) ENSOTSG00005011395 puraa (ENSOTSG00005011397) nrg2a (ENSOTSG00005011398) ENSOTSG00005011408 pygma (ENSOTSG00005011413) Coho salmon MODERN SPECIES 20 ENSOKIG00005038965 ENSOKIG00005038948 PACS1 (ENSOKIG00005038787) actn3a (ENSOKIG00005037618) rbm14a (ENSOKIG00005037530) ENSOKIG00005037357 dpp3 (ENSOKIG00005037118) ENSOKIG00005048039 ENSOKIG00005048015 ENSOKIG00005047950 FAM89B (ENSOKIG00005047932) znrd2 (ENSOKIG00005047929) arr3a (ENSOKIG00005047751) MCF2 (ENSOKIG00005047311) #20 f9b (ENSOKIG00005047230) #21 fgf13b (ENSOKIG00005047143) #22 tmtops3b (ENSOKIG00005047126) htatsf1 (ENSOKIG00005047104) #32 fhl1b (ENSOKIG00005047100) #36 slc7a3a (ENSOKIG00005047076) RAB39B (ENSOKIG00005047057) ENSOKIG00005047052 ENSOKIG00005047039 ENSOKIG00005046673 ENSOKIG00005046636 ENSOKIG00005046632 FIS1 (ENSOKIG00005046624) ENSOKIG00005046605 ENSOKIG00005046590 SPNS2 (ENSOKIG00005046402) ruvbl2 (ENSOKIG00005046268) Rainbow trout MODERN SPECIES 1 ENSOMYG00000071473 ENSOMYG00000026521 ENSOMYG00000026579 ENSOMYG00000026641 ENSOMYG00000059554 actn3a (ENSOMYG00000028079) rbm14a (ENSOMYG00000035897) ENSOMYG00000035902 dpp3 (ENSOMYG00000035956) ENSOMYG00000036082 ENSOMYG00000036207 znrd2 (ENSOMYG00000036392) arr3a (ENSOMYG00000036440) MCF2 (ENSOMYG00000036675) #20 f9b (ENSOMYG00000058395) #21 fgf13b (ENSOMYG00000054072) #22 ENSOMYG00000036855 #24 tmtops3b (ENSOMYG00000036862) htatsf1 (ENSOMYG00000036880) #32 fhl1b (ENSOMYG00000036938) #36 snx12 (ENSOMYG00000036968) slc7a3a (ENSOMYG00000036986) ENSOMYG00000075970 ENSOMYG00000037001 ENSOMYG00000077574 ENSOMYG00000039297 ENSOMYG00000042969 ENSOMYG00000074892 ENSOMYG00000046315 ENSOMYG00000046317 ENSOMYG00000046319 Huchen MODERN SPECIES 1295 ENSHHUG00000044352 ENSHHUG00000044358 ENSHHUG00000044397 FAM89B (ENSHHUG00000044433) znrd2 (ENSHHUG00000044445) arr3a (ENSHHUG00000044453) MCF2 (ENSHHUG00000044495) #20 f9b (ENSHHUG00000044817) #21 fgf13b (ENSHHUG00000044822) #22 ZIC3 (ENSHHUG00000044833) #24 tmtops3b (ENSHHUG00000044836) htatsf1 (ENSHHUG00000044915) #32 ENSHHUG00000044919 fhl1b (ENSHHUG00000044928) #36 snx12 (ENSHHUG00000044932) slc7a3a (ENSHHUG00000044939) RAB39B (ENSHHUG00000044945) ENSHHUG00000044951 ENSHHUG00000044957 ENSHHUG00000045185 CLCN5 (ENSHHUG00000045540) Salmoninae ANCESTRAL SPECIES 423 ENSGT00950000183068.a.a.a.a.c.b ENSGT00940000165121.a.j ENSGT00940000158132.n.b ENSGT00940000154651.a.h ENSGT00940000153609.a.r.b ENSGT00940000164309.u ENSGT00940000156774.o ENSGT00940000156996.f.a.a.d ENSGT00990000209053 ENSGT00940000154958 ENSGT00940000161027.a.b ENSGT00940000153370.a.a.f ENSGT00390000013169.d ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a.e ENSGT00940000162313.b.d #22 ENSGT00940000160788.m.a #24 ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000154833.a.g.a #36 ENSGT00940000153609.a.r.a ENSGT00940000154651.a.g ENSGT00940000158132.n.a ENSGT00940000165121.a.i ENSGT00950000183068.a.a.a.a.c.a ENSGT00950000183118.A.c.b.b ENSGT00940000153763.a.d.a.a Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00950000183068.a.a.a.a.c.b ENSGT00940000165121.a.j ENSGT00940000158132.n.b ENSGT00940000154651.a.h ENSGT00940000153609.a.r.b ENSGT00940000164309.u ENSGT00940000156774.o ENSGT00940000156996.f.a.a.d ENSGT00990000209053 ENSGT00940000154958 ENSGT00940000161027.a.b ENSGT00940000153370.a.a.f ENSGT00390000013169.d ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a.e ENSGT00940000162313.b.d #22 ENSGT00940000160788.m.a #24 ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000156341.e.a ENSGT00940000154833.a.g.b #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00950000182898.a.a.a.a.a.h.b ENSGT00940000158735.d Salmo ANCESTRAL SPECIES 1 ENSGT00950000183068.a.a.a.a.c.b ENSGT00940000158132.n.b ENSGT00940000154651.a.h ENSGT00940000153609.a.r.b ENSGT00940000164309.u ENSGT00940000156774.o ENSGT00940000156996.f.a.a.d ENSGT00990000209053 ENSGT00940000154958 ENSGT00940000155078.b.d ENSGT00940000161027.a.b ENSGT00940000153370.a.a.f ENSGT00390000013169.d ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a.e ENSGT00940000162313.b.d #22 ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000154833.a.g.a #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00940000158735.d ENSGT00940000155978.a.b.b.b ENSGT00940000160483.k.a.c ENSGT00950000183148.b.a.g.b.d River trout MODERN SPECIES 3 ENSSTUG00000015171 ENSSTUG00000015034 RAB39B (ENSSTUG00000015013) slc7a3a (ENSSTUG00000014590) snx12 (ENSSTUG00000014504) il2rga (ENSSTUG00000014496) hif1al2 (ENSSTUG00000014485) ENSSTUG00000014473 ENSSTUG00000014460 ENSSTUG00000014260 EHBP1L1 (ENSSTUG00000014170) FAM89B (ENSSTUG00000014148) znrd2 (ENSSTUG00000014137) ENSSTUG00000014122 arr3a (ENSSTUG00000014006) fgf13b (ENSSTUG00000013960) #22 tmtops3b (ENSSTUG00000013931) fhl1b (ENSSTUG00000013919) #36 slc9a6b (ENSSTUG00000013042) #37 il2rga (ENSSTUG00000012904) dpp3 (ENSSTUG00000011636) ENSSTUG00000011463 rbm14a (ENSSTUG00000011379) ENSSTUG00000011360 pacs1a (ENSSTUG00000011109) CAPN1 (ENSSTUG00000007130) bbs1 (ENSSTUG00000005212) ENSSTUG00000004863 ENSSTUG00000004841 ENSSTUG00000004835 PCNX3 (ENSSTUG00000002619) Atlantic salmon MODERN SPECIES 2 ENSSSAG00000040974 ENSSSAG00000084291 slc7a3a (ENSSSAG00000038900) snx12 (ENSSSAG00000038451) ENSSSAG00000038150 ENSSSAG00000091780 ENSSSAG00000037949 ENSSSAG00000063518 ENSSSAG00000063509 rab1a (ENSSSAG00000117512) EHBP1L1 (ENSSSAG00000063324) ENSSSAG00000103819 ssa27 (ENSSSAG00000063312) ENSSSAG00000063303 arr3a (ENSSSAG00000063188) ENSSSAG00000063004 #22 ENSSSAG00000062995 #24 ENSSSAG00000062990 ENSSSAG00000051839 ENSSSAG00000042506 #37 dpp3 (ENSSSAG00000051920) ENSSSAG00000053299 rbm14a (ENSSSAG00000053395) pacs1a (ENSSSAG00000053509) ENSSSAG00000053959 bbs1 (ENSSSAG00000061521) ENSSSAG00000121391 ENSSSAG00000062791 ENSSSAG00000042162 rasgrp2 (ENSSSAG00000042038) pygma (ENSSSAG00000010242) Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00950000183068.a.a.a.a.c.b ENSGT00940000165121.a.j ENSGT00940000158132.n.b ENSGT00940000154651.a.h ENSGT00940000153609.a.r.b ENSGT00940000164309.u ENSGT00940000156774.o ENSGT00940000156996.f.a.a.d ENSGT00990000209053 ENSGT00940000154958 ENSGT00940000161027.a.b ENSGT00940000153370.a.a.f ENSGT00390000013169.d ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a.e ENSGT00940000162313.b.d #22 ENSGT00940000160788.m.a #24 ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000156341.e.a ENSGT00940000154833.a.g.b #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00950000182898.a.a.a.a.a.h.b ENSGT00940000158735.d Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00950000183068.a.a.a.a.c.b ENSGT00940000165121.a.j ENSGT00940000158132.n.b ENSGT00940000154651.a.h ENSGT00940000153609.a.r.b ENSGT00940000164309.u ENSGT00940000156774.o ENSGT00940000156996.f.a.a.d ENSGT00990000209053 ENSGT00940000154958 ENSGT00940000161027.a.b ENSGT00940000153370.a.a.f ENSGT00390000013169.d ENSGT00390000008727.a.a.c ENSGT00950000182887.C.b.b.a.e ENSGT00940000162313.b.d #22 ENSGT01100000263502.A.a.a.a.a.b.f ENSGT00940000156341.e.a ENSGT00940000154833.a.g.b #36 ENSGT00940000153460.c.b.c.b #37 ENSGT00940000164309.t ENSGT00390000007335.d ENSGT00940000165459.a.a.b.d ENSGT00940000157436.b.b ENSGT00950000183209.a.a.b.c.b ENSGT00940000159147.b.a ENSGT00390000005232 ENSGT00940000158605.s.b ENSGT00950000182898.a.a.a.a.a.h.b ENSGT00940000158735.d ENSGT00940000155978.a.b.b.b Coho salmon MODERN SPECIES 21 ENSOKIG00005040482 ENSOKIG00005040527 RAB39B (ENSOKIG00005040539) slc7a3a (ENSOKIG00005040560) snx12 (ENSOKIG00005040716) ENSOKIG00005040755 hif1al2 (ENSOKIG00005040881) ENSOKIG00005040925 ENSOKIG00005040935 ENSOKIG00005040987 EHBP1L1 (ENSOKIG00005041235) FAM89B (ENSOKIG00005041446) znrd2 (ENSOKIG00005041459) ENSOKIG00005041501 arr3a (ENSOKIG00005041601) fgf13b (ENSOKIG00005042071) #22 tmtops3b (ENSOKIG00005042186) ENSOKIG00005042208 fhl1b (ENSOKIG00005042229) #36 slc9a6b (ENSOKIG00005042626) #37 ENSOKIG00005044015 dpp3 (ENSOKIG00005044072) ENSOKIG00005044408 rbm14a (ENSOKIG00005044504) pacs1a (ENSOKIG00005044587) ENSOKIG00005045331 bbs1 (ENSOKIG00005046532) ENSOKIG00005046878 slc29a2 (ENSOKIG00005046909) PCNX3 (ENSOKIG00005046991) NRXN2 (ENSOKIG00005048164) Chinook salmon MODERN SPECIES 26 ENSOTSG00005007164 ENSOTSG00005007168 RAB39B (ENSOTSG00005007172) slc7a3a (ENSOTSG00005007176) snx12 (ENSOTSG00005007310) il2rga (ENSOTSG00005007311) ENSOTSG00005007313 hif1al2 (ENSOTSG00005007314) ENSOTSG00005007322 ENSOTSG00005007323 EHBP1L1 (ENSOTSG00005007654) FAM89B (ENSOTSG00005010622) znrd2 (ENSOTSG00005010623) ENSOTSG00005010624 arr3a (ENSOTSG00005010627) fgf13b (ENSOTSG00005010734) #22 ENSOTSG00005010735 tmtops3b (ENSOTSG00005010736) ENSOTSG00005010737 fhl1b (ENSOTSG00005010739) #36 slc9a6b (ENSOTSG00005010740) #37 il2rga (ENSOTSG00005011474) dpp3 (ENSOTSG00005011481) ENSOTSG00005013172 rbm14a (ENSOTSG00005013175) CAPN1 (ENSOTSG00005013242) bbs1 (ENSOTSG00005028335) ENSOTSG00005029671 ENSOTSG00005029677 NRXN2 (ENSOTSG00005036454) RASGRP2 (ENSOTSG00005036924) Rainbow trout MODERN SPECIES 364 slc7a3a (ENSOMYG00000042826) snx12 (ENSOMYG00000054859) il2rgamma (ENSOMYG00000042785) ENSOMYG00000066926 ENSOMYG00000042767 ENSOMYG00000042750 ENSOMYG00000042746 ENSOMYG00000042612 ENSOMYG00000076294 EHBP1L1 (ENSOMYG00000042050) ENSOMYG00000041989 znrd2 (ENSOMYG00000041986) ENSOMYG00000041972 arr3a (ENSOMYG00000041902) ENSOMYG00000069284 fgf13b (ENSOMYG00000036820) #22 ENSOMYG00000041821 #24 tmtops3b (ENSOMYG00000041819) ENSOMYG00000041811 fhl1b (ENSOMYG00000041803) #36 il2rc2 (ENSOMYG00000041376) slc9a6b (ENSOMYG00000041463) #37 dpp3 (ENSOMYG00000040545) ENSOMYG00000040326 rbm14a (ENSOMYG00000040313) pacs1a (ENSOMYG00000040229) ENSOMYG00000032016 bbs1 (ENSOMYG00000029975) cfbl (ENSOMYG00000029511) ENSOMYG00000028756 ENSOMYG00000028233 Huchen MODERN SPECIES 961 ENSHHUG00000026902 ENSHHUG00000026960 RAB39B (ENSHHUG00000026964) slc7a3a (ENSHHUG00000026971) snx12 (ENSHHUG00000027069) hif1al2 (ENSHHUG00000027078) il2rga (ENSHHUG00000027092) ENSHHUG00000027106 ENSHHUG00000027137 ENSHHUG00000027171 EHBP1L1 (ENSHHUG00000027444) FAM89B (ENSHHUG00000027479) znrd2 (ENSHHUG00000027480) ENSHHUG00000027481 arr3a (ENSHHUG00000027492) fgf13b (ENSHHUG00000027569) #22 ZIC3 (ENSHHUG00000027607) #24 tmtops3b (ENSHHUG00000027611) ENSHHUG00000027651 htatsf1 (ENSHHUG00000027652) #32 fhl1b (ENSHHUG00000027670) #36 slc9a6b (ENSHHUG00000027781) #37 il2rga (ENSHHUG00000028228) dpp3 (ENSHHUG00000028252) ENSHHUG00000028340 rbm14a (ENSHHUG00000028367) ENSHHUG00000028430 Northern pike MODERN SPECIES 6 actn3a (ENSELUG00000023625) rbm14a (ENSELUG00000023633) ENSELUG00000023688 dpp3 (ENSELUG00000000997) ENSELUG00000023758 hif1al2 (ENSELUG00000023783) ENSELUG00000023775 ENSELUG00000023815 ENSELUG00000023941 FAM89B (ENSELUG00000031645) znrd2 (ENSELUG00000023985) ENSELUG00000024022 arr3a (ENSELUG00000024029) MCF2 (ENSELUG00000024047) #20 f9b (ENSELUG00000024057) #21 fgf13b (ENSELUG00000024077) #22 cldn3d (ENSELUG00000001305) abhd11 (ENSELUG00000024175) sumf2 (ENSELUG00000024198) ENSELUG00000024205 akt2l (ENSELUG00000024251) ENSELUG00000033159 clk4b (ENSELUG00000024259) ENSELUG00000024267 MAPK9 (ENSELUG00000020634) gfpt2 (ENSELUG00000024338) zgc:123105 (ENSELUG00000001026) ADAMTS2 (ENSELUG00000024520) cnot6a (ENSELUG00000024580) adra2db (ENSELUG00000003833) SLC34A1 (ENSELUG00000024938) Acanthomorphata ANCESTRAL SPECIES 10 ENSGT00940000153609.a ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00940000155650.a.b ENSGT00940000161042 ENSGT00940000157770 ENSGT00390000011206.b ENSGT00390000007125.b ENSGT00390000014412.k ENSGT00390000005989.a.b.a.b Euacanthomorphacea ANCESTRAL SPECIES 20 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.b ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00940000155650.a.b ENSGT00940000161042 ENSGT00940000157770 ENSGT00390000011206.b ENSGT00390000007125.b ENSGT00390000014412.k Percomorphaceae ANCESTRAL SPECIES 9 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.b ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00940000155650.a.b ENSGT00940000161042 ENSGT00940000157770 ENSGT00390000011206.b ENSGT00390000007125.b ENSGT00390000014412.k Tiger tail seahorse MODERN SPECIES 408 RNF145 (ENSHCOG00000009281) ublcp1 (ENSHCOG00000009253) ubtd2 (ENSHCOG00000009229) arr3a (ENSHCOG00000009213) ENSHCOG00000000289 #20 f9b (ENSHCOG00000009166) #21 fgf13b (ENSHCOG00000009068) #22 AFAP1L1 (ENSHCOG00000009048) glo1 (ENSHCOG00000009034) znrd2 (ENSHCOG00000009015) ENSHCOG00000008991 ENSHCOG00000008979 TRAPPC14 (ENSHCOG00000008955) ENSHCOG00000008921 ENSHCOG00000008867 ENSHCOG00000000284 rnasekb (ENSHCOG00000008838) zgc:92664 (ENSHCOG00000008797) ovca2 (ENSHCOG00000008771) smg6 (ENSHCOG00000008761) ENSHCOG00000008691 ttc1 (ENSHCOG00000008650) Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Ovalentaria ANCESTRAL SPECIES 11 ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Aplocheiloidei ANCESTRAL SPECIES 35 ENSGT00940000153609.a ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i.b ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Mangrove rivulus MODERN SPECIES 58 snx12 (ENSKMAG00000008727) slc7a3a (ENSKMAG00000008658) RAB39B (ENSKMAG00000008625) ENSKMAG00000008611 ENSKMAG00000008552 rbm14a (ENSKMAG00000008514) ENSKMAG00000008499 dpp3 (ENSKMAG00000008424) ENSKMAG00000008389 ENSKMAG00000008349 ENSKMAG00000008225 znrd2 (ENSKMAG00000008182) arr3a (ENSKMAG00000008151) MCF2 (ENSKMAG00000008123) #20 f9b (ENSKMAG00000008098) #21 fgf13b (ENSKMAG00000008064) #22 afap1l1b (ENSKMAG00000008026) ablim3 (ENSKMAG00000007970) ENSKMAG00000007935 ADRB2 (ENSKMAG00000007924) ubtd2 (ENSKMAG00000007896) IL12B (ENSKMAG00000007875) ublcp1 (ENSKMAG00000007828) RNF145 (ENSKMAG00000007773) EBF1 (ENSKMAG00000007667) htatsf1 (ENSKMAG00000007622) #32 bod1 (ENSKMAG00000007608) STC2 (ENSKMAG00000007593) BNIP1 (ENSKMAG00000007566) CREBRF (ENSKMAG00000007522) PCYOX1L (ENSKMAG00000007492) Turquoise killifish MODERN SPECIES 1620 SLC7A3A (ENSNFUG00015007889) ENSNFUG00015007909 ENSNFUG00015007919 rbm14a (ENSNFUG00015007924) ENSNFUG00015007927 DPP3 (ENSNFUG00015007938) Nfu_g_1_005373 (ENSNFUG00015007966) ENSNFUG00015007991 ENSNFUG00015008094 ENSNFUG00015008095 SSSCA1 (ENSNFUG00015008104) ARR3A (ENSNFUG00015008125) MCF2B (ENSNFUG00015008350) #20 ENSNFUG00015008634 f9b (ENSNFUG00015008636) #21 OLA.13760 (ENSNFUG00015008638) #22 AFAP1L1B (ENSNFUG00015008640) ablim3 (ENSNFUG00015008641) ADRB2B (ENSNFUG00015008648) UBTD2 (ENSNFUG00015008654) IL12BB (ENSNFUG00015008661) UBLCP1 (ENSNFUG00015008670) RNF145 (ENSNFUG00015008678) ENSNFUG00015008691 ENSNFUG00015008696 EBF1 (ENSNFUG00015008709) HTATSF1 (ENSNFUG00015008749) #32 BOD1 (ENSNFUG00015008836) CABZ01034707.1 (ENSNFUG00015008839) BNIP1 (ENSNFUG00015008846) CREBRF (ENSNFUG00015008855) Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 NAME_4 ANCESTRAL SPECIES 12 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Sheepshead minnow MODERN SPECIES 206 RAB39B (ENSCVAG00000014915) ENSCVAG00000014903 ENSCVAG00000014880 rbm14a (ENSCVAG00000014858) ENSCVAG00000014790 dpp3 (ENSCVAG00000014773) ENSCVAG00000014702 ENSCVAG00000014695 ENSCVAG00000000370 ENSCVAG00000014598 FAM89B (ENSCVAG00000014584) znrd2 (ENSCVAG00000014581) arr3a (ENSCVAG00000014576) MCF2 (ENSCVAG00000014560) #20 f9b (ENSCVAG00000014495) #21 fgf13b (ENSCVAG00000014484) #22 afap1l1b (ENSCVAG00000014453) ablim3 (ENSCVAG00000014437) ADRB2 (ENSCVAG00000014254) ubtd2 (ENSCVAG00000014249) IL12B (ENSCVAG00000014229) ublcp1 (ENSCVAG00000014220) RNF145 (ENSCVAG00000014162) EBF1 (ENSCVAG00000014113) htatsf1 (ENSCVAG00000014070) #32 bod1 (ENSCVAG00000014044) STC2 (ENSCVAG00000013998) BNIP1 (ENSCVAG00000013923) CREBRF (ENSCVAG00000013884) PCYOX1L (ENSCVAG00000013866) TCERG1 (ENSCVAG00000013825) Mummichog MODERN SPECIES 403 slc7a3a (ENSFHEG00000020862) RAB39B (ENSFHEG00000020877) ENSFHEG00000020882 ENSFHEG00000020902 rbm14a (ENSFHEG00000020913) ENSFHEG00000020925 dpp3 (ENSFHEG00000020932) ENSFHEG00000000520 RCE1 (ENSFHEG00000020964) ENSFHEG00000020974 ENSFHEG00000020980 znrd2 (ENSFHEG00000020993) arr3a (ENSFHEG00000021032) MCF2 (ENSFHEG00000022230) #20 f9b (ENSFHEG00000022273) #21 fgf13b (ENSFHEG00000022293) #22 afap1l1b (ENSFHEG00000022326) ENSFHEG00000022350 ENSFHEG00000022362 ADRB2 (ENSFHEG00000022386) ubtd2 (ENSFHEG00000022399) Poeciliinae ANCESTRAL SPECIES 17 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Poecilia ANCESTRAL SPECIES 7 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 NAME_6 ANCESTRAL SPECIES 1 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Amazon molly MODERN SPECIES 255 ENSPFOG00000004175 snx12 (ENSPFOG00000004239) slc7a3a (ENSPFOG00000004316) RAB39B (ENSPFOG00000004492) ENSPFOG00000004534 ENSPFOG00000004606 rbm14a (ENSPFOG00000004843) dpp3 (ENSPFOG00000004916) ENSPFOG00000005048 EHBP1L1 (ENSPFOG00000005065) FAM89B (ENSPFOG00000005167) znrd2 (ENSPFOG00000005175) arr3a (ENSPFOG00000005241) MCF2 (ENSPFOG00000005613) #20 f9b (ENSPFOG00000006072) #21 fgf13b (ENSPFOG00000006203) #22 afap1l1b (ENSPFOG00000006277) ABLIM3 (ENSPFOG00000006596) ADRB2 (ENSPFOG00000007036) ubtd2 (ENSPFOG00000007096) IL12B (ENSPFOG00000007116) ublcp1 (ENSPFOG00000007186) RNF145 (ENSPFOG00000007292) EBF1 (ENSPFOG00000007531) htatsf1 (ENSPFOG00000007871) #32 bod1 (ENSPFOG00000008031) STC2 (ENSPFOG00000023652) STC2 (ENSPFOG00000008043) BNIP1 (ENSPFOG00000008074) CREBRF (ENSPFOG00000008174) PCYOX1L (ENSPFOG00000008275) Sailfin molly MODERN SPECIES 87 rbm14a (ENSPLAG00000017359) ENSPLAG00000017368 dpp3 (ENSPLAG00000017419) ENSPLAG00000017458 EHBP1L1 (ENSPLAG00000017547) FAM89B (ENSPLAG00000017555) znrd2 (ENSPLAG00000017560) arr3a (ENSPLAG00000017586) MCF2 (ENSPLAG00000017598) #20 f9b (ENSPLAG00000017940) #21 fgf13b (ENSPLAG00000017978) #22 afap1l1b (ENSPLAG00000018004) ablim3 (ENSPLAG00000018246) ADRB2 (ENSPLAG00000018276) ENSPLAG00000018286 ARAP1 (ENSPLAG00000018306) stard10 (ENSPLAG00000018324) CLPB (ENSPLAG00000018334) phox2a (ENSPLAG00000018346) inppl1a (ENSPLAG00000018457) folr (ENSPLAG00000018473) anapc15 (ENSPLAG00000018477) tomt (ENSPLAG00000018490) ENSPLAG00000018510 Guppy MODERN SPECIES 444 ENSPREG00000006236 ENSPREG00000006255 fhl1b (ENSPREG00000006263) #36 slc9a6b (ENSPREG00000006340) #37 ENSPREG00000007082 slc7a3a (ENSPREG00000007114) RAB39B (ENSPREG00000007129) ENSPREG00000007150 ENSPREG00000007181 rbm14a (ENSPREG00000007274) dpp3 (ENSPREG00000007298) ENSPREG00000007366 ENSPREG00000007374 znrd2 (ENSPREG00000007391) f9b (ENSPREG00000007455) #21 fgf13b (ENSPREG00000007543) #22 ENSPREG00000007561 ABLIM3 (ENSPREG00000007581) ENSPREG00000007607 ubtd2 (ENSPREG00000007621) IL12B (ENSPREG00000007646) ublcp1 (ENSPREG00000007679) RNF145 (ENSPREG00000007712) EBF1 (ENSPREG00000007760) htatsf1 (ENSPREG00000007811) #32 bod1 (ENSPREG00000007838) BNIP1 (ENSPREG00000007862) CREBRF (ENSPREG00000007884) PCYOX1L (ENSPREG00000007899) TCERG1 (ENSPREG00000007921) ENSPREG00000008013 Platyfish MODERN SPECIES 2 snx12 (ENSXMAG00000000317) slc7a3a (ENSXMAG00000000319) RAB39B (ENSXMAG00000000325) ENSXMAG00000000327 ENSXMAG00000000328 ENSXMAG00000023871 rbm14a (ENSXMAG00000000338) dpp3 (ENSXMAG00000000342) ENSXMAG00000027013 ENSXMAG00000028134 FAM89B (ENSXMAG00000000383) znrd2 (ENSXMAG00000000384) arr3a (ENSXMAG00000000387) MCF2 (ENSXMAG00000000404) #20 f9b (ENSXMAG00000000424) #21 fgf13b (ENSXMAG00000000441) #22 afap1l1b (ENSXMAG00000000445) ablim3 (ENSXMAG00000000456) ADRB2 (ENSXMAG00000000470) ubtd2 (ENSXMAG00000026332) IL12B (ENSXMAG00000000474) ublcp1 (ENSXMAG00000025933) RNF145 (ENSXMAG00000000480) EBF1 (ENSXMAG00000000489) htatsf1 (ENSXMAG00000000490) #32 bod1 (ENSXMAG00000022469) STC2 (ENSXMAG00000000495) BNIP1 (ENSXMAG00000000497) CREBRF (ENSXMAG00000000504) PCYOX1L (ENSXMAG00000027639) TCERG1 (ENSXMAG00000000519) Oryzias ANCESTRAL SPECIES 14 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 ENSGT00940000155650.a.b Oryzias_b ANCESTRAL SPECIES 13 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 ENSGT00940000155650.a.b Javanese ricefish MODERN SPECIES 5 RAB39B (ENSOJAG00000010113) ENSOJAG00000010108 ENSOJAG00000010055 rbm14a (ENSOJAG00000010029) ENSOJAG00000009868 dpp3 (ENSOJAG00000009649) ENSOJAG00000009612 ENSOJAG00000009588 ENSOJAG00000009568 ENSOJAG00000009559 znrd2 (ENSOJAG00000009555) arr3a (ENSOJAG00000009086) MCF2 (ENSOJAG00000008879) #20 ENSOJAG00000008845 f9b (ENSOJAG00000008834) #21 fgf13b (ENSOJAG00000008788) #22 afap1l1b (ENSOJAG00000008773) ablim3 (ENSOJAG00000008739) ADRB2 (ENSOJAG00000008607) ubtd2 (ENSOJAG00000008586) ENSOJAG00000008524 ublcp1 (ENSOJAG00000008495) RNF145 (ENSOJAG00000008356) EBF1 (ENSOJAG00000006781) htatsf1 (ENSOJAG00000006497) #32 bod1 (ENSOJAG00000006467) ENSOJAG00000006455 BNIP1 (ENSOJAG00000006433) CREBRF (ENSOJAG00000006413) PCYOX1L (ENSOJAG00000006386) TCERG1 (ENSOJAG00000006210) Indian medaka MODERN SPECIES 4 slc7a3a (ENSOMEG00000006311) RAB39B (ENSOMEG00000006333) ENSOMEG00000006344 ENSOMEG00000006405 rbm14a (ENSOMEG00000006508) ENSOMEG00000006537 dpp3 (ENSOMEG00000006610) ENSOMEG00000006620 ENSOMEG00000006664 ENSOMEG00000006734 znrd2 (ENSOMEG00000006765) arr3a (ENSOMEG00000006803) MCF2 (ENSOMEG00000006840) #20 tert (ENSOMEG00000006967) f9b (ENSOMEG00000007003) #21 fgf13b (ENSOMEG00000007025) #22 afap1l1b (ENSOMEG00000007075) ablim3 (ENSOMEG00000007193) ADRB2 (ENSOMEG00000007249) ubtd2 (ENSOMEG00000007255) IL12B (ENSOMEG00000007298) ublcp1 (ENSOMEG00000007357) RNF145 (ENSOMEG00000007416) EBF1 (ENSOMEG00000007507) htatsf1 (ENSOMEG00000007564) #32 bod1 (ENSOMEG00000007588) BNIP1 (ENSOMEG00000007608) CREBRF (ENSOMEG00000000190) PCYOX1L (ENSOMEG00000007716) TCERG1 (ENSOMEG00000007795) CLINT1 (ENSOMEG00000007904) Oryzias_a ANCESTRAL SPECIES 2 ENSGT00940000153609.a ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 ENSGT00940000155650.a.b Japanese Medaka HdrR MODERN SPECIES 5 slc7a3a (ENSORLG00000001843) ENSORLG00000001857 ENSORLG00000001890 rbm14a (ENSORLG00000001900) dpp3 (ENSORLG00000001951) ENSORLG00000024145 ENSORLG00000001955 ENSORLG00000024591 ENSORLG00000030006 ENSORLG00000028902 znrd2 (ENSORLG00000023825) arr3a (ENSORLG00000001983) MCF2 (ENSORLG00000002026) #20 ENSORLG00000024912 f9b (ENSORLG00000024715) #21 fgf13b (ENSORLG00000002061) #22 afap1l1b (ENSORLG00000002101) ENSORLG00000002194 ENSORLG00000002214 ubtd2 (ENSORLG00000025523) IL12B (ENSORLG00000002238) ublcp1 (ENSORLG00000002261) RNF145 (ENSORLG00000002282) EBF1 (ENSORLG00000002342) htatsf1 (ENSORLG00000002356) #32 bod1 (ENSORLG00000025671) BNIP1 (ENSORLG00000002369) CREBRF (ENSORLG00000002384) PCYOX1L (ENSORLG00000002404) TCERG1 (ENSORLG00000002439) CLINT1 (ENSORLG00000002460) Chinese medaka MODERN SPECIES 1285 snx12 (ENSOSIG00000020035) slc7a3a (ENSOSIG00000019996) RAB39B (ENSOSIG00000019992) ENSOSIG00000019989 ENSOSIG00000018818 rbm14a (ENSOSIG00000018784) ENSOSIG00000018782 dpp3 (ENSOSIG00000018720) ENSOSIG00000018704 ENSOSIG00000018700 ENSOSIG00000018679 znrd2 (ENSOSIG00000018660) arr3a (ENSOSIG00000018026) MCF2 (ENSOSIG00000017900) #20 f9b (ENSOSIG00000017889) #21 fgf13b (ENSOSIG00000017887) #22 afap1l1b (ENSOSIG00000017880) ablim3 (ENSOSIG00000017879) ADRB2 (ENSOSIG00000017868) Ovalentaria_B ANCESTRAL SPECIES 16 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Pomacentridae ANCESTRAL SPECIES 10 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00940000155650.a.b ENSGT00940000161042 ENSGT00940000157770 ENSGT00390000011206.b ENSGT00390000007125.b ENSGT00390000014412.k ENSGT00390000005989.a.b.a.b Bicolor damselfish MODERN SPECIES 98 f9b (ENSSPAG00000019965) #21 fgf13b (ENSSPAG00000019990) #22 Pomacentridae_A ANCESTRAL SPECIES 3 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00940000155650.a.b ENSGT00940000161042 ENSGT00940000157770 ENSGT00390000011206.b ENSGT00390000007125.b ENSGT00390000014412.k ENSGT00390000005989.a.b.a.b Spiny chromis MODERN SPECIES 688 ENSAPOG00000003360 rbm14a (ENSAPOG00000003380) ENSAPOG00000003394 dpp3 (ENSAPOG00000003466) ENSAPOG00000003501 ENSAPOG00000003523 ENSAPOG00000003536 ENSAPOG00000003549 FAM89B (ENSAPOG00000000798) znrd2 (ENSAPOG00000003601) arr3a (ENSAPOG00000003658) MCF2 (ENSAPOG00000003675) #20 f9b (ENSAPOG00000003690) #21 fgf13b (ENSAPOG00000003725) #22 afap1l1b (ENSAPOG00000003754) ablim3 (ENSAPOG00000003868) ADRB2 (ENSAPOG00000000080) Amphiprion ANCESTRAL SPECIES 3 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00940000181697 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00940000181131 ENSGT00940000155650.a.b ENSGT00940000161042 ENSGT00940000157770 ENSGT00390000011206.b ENSGT01090000259997.a.d.b.b.b.b.b.c Clown anemonefish MODERN SPECIES 739 ENSAOCG00000022607 ENSAOCG00000001958 FAM89B (ENSAOCG00000022438) znrd2 (ENSAOCG00000022428) arr3a (ENSAOCG00000022413) MCF2 (ENSAOCG00000022360) #20 f9b (ENSAOCG00000022262) #21 fgf13b (ENSAOCG00000022246) #22 afap1l1b (ENSAOCG00000022210) ablim3 (ENSAOCG00000022137) ADRB2 (ENSAOCG00000021933) ubtd2 (ENSAOCG00000021918) IL12B (ENSAOCG00000021887) ublcp1 (ENSAOCG00000021854) RNF145 (ENSAOCG00000021805) ENSAOCG00000021742 EBF1 (ENSAOCG00000021715) ENSAOCG00000021673 Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 6 atp5l (ENSAPEG00000014537) nherf4b (ENSAPEG00000014555) cltca (ENSAPEG00000014591) ptrh2 (ENSAPEG00000014719) VMP1 (ENSAPEG00000014734) ENSAPEG00000014767 ENSAPEG00000014775 rnft1 (ENSAPEG00000014829) med13a (ENSAPEG00000014866) ints2 (ENSAPEG00000015071) AUTS2 (ENSAPEG00000015219) cxadr (ENSAPEG00000015699) btg3 (ENSAPEG00000015710) ENSAPEG00000015722 #21 fgf13b (ENSAPEG00000015730) #22 ENSAPEG00000015745 #22 afap1l1b (ENSAPEG00000015760) ablim3 (ENSAPEG00000015796) ADRB2 (ENSAPEG00000015923) ubtd2 (ENSAPEG00000015929) IL12B (ENSAPEG00000015946) ublcp1 (ENSAPEG00000015991) RNF145 (ENSAPEG00000016047) ENSAPEG00000016088 EBF1 (ENSAPEG00000016110) ENSAPEG00000016158 CLINT1 (ENSAPEG00000016192) TCERG1 (ENSAPEG00000016260) PCYOX1L (ENSAPEG00000016324) ENSAPEG00000016336 CREBRF (ENSAPEG00000016349) Orange clownfish MODERN SPECIES 6 ftr82 (ENSAPEG00000014500) atp5l (ENSAPEG00000014537) nherf4b (ENSAPEG00000014555) cltca (ENSAPEG00000014591) ptrh2 (ENSAPEG00000014719) VMP1 (ENSAPEG00000014734) ENSAPEG00000014767 ENSAPEG00000014775 rnft1 (ENSAPEG00000014829) med13a (ENSAPEG00000014866) ints2 (ENSAPEG00000015071) AUTS2 (ENSAPEG00000015219) cxadr (ENSAPEG00000015699) btg3 (ENSAPEG00000015710) ENSAPEG00000015722 #21 fgf13b (ENSAPEG00000015730) #22 ENSAPEG00000015745 #22 afap1l1b (ENSAPEG00000015760) ablim3 (ENSAPEG00000015796) ADRB2 (ENSAPEG00000015923) ubtd2 (ENSAPEG00000015929) IL12B (ENSAPEG00000015946) ublcp1 (ENSAPEG00000015991) RNF145 (ENSAPEG00000016047) ENSAPEG00000016088 EBF1 (ENSAPEG00000016110) ENSAPEG00000016158 CLINT1 (ENSAPEG00000016192) TCERG1 (ENSAPEG00000016260) PCYOX1L (ENSAPEG00000016324) ENSAPEG00000016336 Cichlidae ANCESTRAL SPECIES 4 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Midas cichlid MODERN SPECIES 60 snx12 (ENSACIG00000000241) slc7a3a (ENSACIG00000000159) RAB39B (ENSACIG00000000154) ENSACIG00000021228 ENSACIG00000021202 rbm14a (ENSACIG00000021173) ENSACIG00000021158 dpp3 (ENSACIG00000021133) ENSACIG00000021111 ENSACIG00000021037 ENSACIG00000020997 znrd2 (ENSACIG00000020951) arr3a (ENSACIG00000020924) MCF2 (ENSACIG00000020888) #20 f9b (ENSACIG00000020872) #21 fgf13b (ENSACIG00000020858) #22 afap1l1b (ENSACIG00000020759) ablim3 (ENSACIG00000020709) ADRB2 (ENSACIG00000020563) ubtd2 (ENSACIG00000020544) IL12B (ENSACIG00000020532) ublcp1 (ENSACIG00000020518) RNF145 (ENSACIG00000020500) EBF1 (ENSACIG00000020484) htatsf1 (ENSACIG00000020459) #32 ENSACIG00000020454 ENSACIG00000020412 BNIP1 (ENSACIG00000020392) CREBRF (ENSACIG00000020364) PCYOX1L (ENSACIG00000020354) TCERG1 (ENSACIG00000020318) Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Nile tilapia MODERN SPECIES 1 slc7a3a (ENSONIG00000008534) RAB39B (ENSONIG00000038013) ENSONIG00000008546 ENSONIG00000008548 rbm14a (ENSONIG00000008557) ENSONIG00000041478 dpp3 (ENSONIG00000008558) ENSONIG00000027324 ENSONIG00000028970 ENSONIG00000032804 znrd2 (ENSONIG00000028216) ENSONIG00000031227 arr3a (ENSONIG00000008570) MCF2 (ENSONIG00000008583) #20 f9b (ENSONIG00000008591) #21 fgf13b (ENSONIG00000028040) #22 afap1l1b (ENSONIG00000008601) ablim3 (ENSONIG00000008605) ADRB2 (ENSONIG00000036346) ubtd2 (ENSONIG00000008615) IL12B (ENSONIG00000008618) ublcp1 (ENSONIG00000008623) RNF145 (ENSONIG00000008627) EBF1 (ENSONIG00000008631) htatsf1 (ENSONIG00000008638) #32 bod1 (ENSONIG00000042231) STC2 (ENSONIG00000008645) BNIP1 (ENSONIG00000008646) CREBRF (ENSONIG00000008647) PCYOX1L (ENSONIG00000008650) TCERG1 (ENSONIG00000008655) Pseudocrenilabrinae_A ANCESTRAL SPECIES 22 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Haplochromini ANCESTRAL SPECIES 8 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 P. nyererei MODERN SPECIES 321 slc7a3a (ENSPNYG00000015736) RAB39B (ENSPNYG00000015774) ENSPNYG00000015807 ENSPNYG00000015865 rbm14a (ENSPNYG00000015906) ENSPNYG00000015920 dpp3 (ENSPNYG00000015935) ENSPNYG00000015996 ENSPNYG00000016023 ENSPNYG00000016038 ENSPNYG00000016088 znrd2 (ENSPNYG00000016233) arr3a (ENSPNYG00000016254) MCF2 (ENSPNYG00000016299) #20 f9b (ENSPNYG00000016364) #21 fgf13b (ENSPNYG00000016380) #22 afap1l1b (ENSPNYG00000016417) ENSPNYG00000016458 ABLIM3 (ENSPNYG00000016482) ADRB2 (ENSPNYG00000016532) ubtd2 (ENSPNYG00000016542) IL12B (ENSPNYG00000016585) ublcp1 (ENSPNYG00000016605) EBF1 (ENSPNYG00000016643) htatsf1 (ENSPNYG00000016693) #32 ENSPNYG00000016725 BNIP1 (ENSPNYG00000016750) CREBRF (ENSPNYG00000016767) PCYOX1L (ENSPNYG00000016803) TCERG1 (ENSPNYG00000016818) ENSPNYG00000016846 Haplochromini_B ANCESTRAL SPECIES 16 ENSGT00940000153609.a ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Eastern happy MODERN SPECIES 1 snx12 (ENSACLG00000009490) slc7a3a (ENSACLG00000009474) RAB39B (ENSACLG00000009468) ENSACLG00000009465 ENSACLG00000009386 rbm14a (ENSACLG00000009112) ENSACLG00000009093 dpp3 (ENSACLG00000009003) ENSACLG00000008998 ENSACLG00000008975 ENSACLG00000008688 znrd2 (ENSACLG00000008671) arr3a (ENSACLG00000008617) MCF2 (ENSACLG00000008594) #20 f9b (ENSACLG00000008559) #21 fgf13b (ENSACLG00000008552) #22 afap1l1b (ENSACLG00000008529) ablim3 (ENSACLG00000008513) ADRB2 (ENSACLG00000008511) ubtd2 (ENSACLG00000008197) IL12B (ENSACLG00000008190) ublcp1 (ENSACLG00000008166) RNF145 (ENSACLG00000008134) ENSACLG00000008130 ENSACLG00000008129 EBF1 (ENSACLG00000008113) htatsf1 (ENSACLG00000008096) #32 ENSACLG00000008086 BNIP1 (ENSACLG00000007807) CREBRF (ENSACLG00000007766) PCYOX1L (ENSACLG00000007754) Zebra mbuna MODERN SPECIES 1092 snx12 (ENSMZEG00005002228) slc7a3a (ENSMZEG00005002192) RAB39B (ENSMZEG00005002185) ENSMZEG00005001267 ENSMZEG00005001219 rbm14a (ENSMZEG00005001201) ENSMZEG00005001186 dpp3 (ENSMZEG00005001130) ENSMZEG00005001121 ENSMZEG00005001114 ENSMZEG00005000973 znrd2 (ENSMZEG00005000923) arr3a (ENSMZEG00005000912) MCF2 (ENSMZEG00005000848) #20 f9b (ENSMZEG00005000838) #21 fgf13b (ENSMZEG00005000828) #22 afap1l1b (ENSMZEG00005000815) ENSMZEG00005000796 ABLIM3 (ENSMZEG00005000761) ADRB2 (ENSMZEG00005000756) ubtd2 (ENSMZEG00005000741) IL12B (ENSMZEG00005000714) ublcp1 (ENSMZEG00005000662) RNF145 (ENSMZEG00005000588) EBF1 (ENSMZEG00005000538) htatsf1 (ENSMZEG00005000485) #32 bod1 (ENSMZEG00005000477) STC2 (ENSMZEG00005000115) BNIP1 (ENSMZEG00005025287) CREBRF (ENSMZEG00005025280) PCYOX1L (ENSMZEG00005025274) Burton s mouthbrooder MODERN SPECIES 347 snx12 (ENSHBUG00000003490) slc7a3a (ENSHBUG00000003526) RAB39B (ENSHBUG00000003539) ENSHBUG00000003548 ENSHBUG00000000085 rbm14a (ENSHBUG00000003665) ENSHBUG00000003675 dpp3 (ENSHBUG00000003735) ENSHBUG00000003750 ENSHBUG00000003762 ENSHBUG00000003820 znrd2 (ENSHBUG00000003845) arr3a (ENSHBUG00000003900) MCF2 (ENSHBUG00000003923) #20 f9b (ENSHBUG00000003960) #21 fgf13b (ENSHBUG00000003999) #22 afap1l1b (ENSHBUG00000004020) ablim3 (ENSHBUG00000004111) ADRB2 (ENSHBUG00000004125) ubtd2 (ENSHBUG00000004137) IL12B (ENSHBUG00000004166) ublcp1 (ENSHBUG00000000106) RNF145 (ENSHBUG00000004241) EBF1 (ENSHBUG00000004347) htatsf1 (ENSHBUG00000004392) #32 ENSHBUG00000004421 BNIP1 (ENSHBUG00000004466) CREBRF (ENSHBUG00000004512) PCYOX1L (ENSHBUG00000004569) TCERG1 (ENSHBUG00000004587) ENSHBUG00000004619 Lyretail cichlid MODERN SPECIES 297 snx12 (ENSNBRG00000005148) slc7a3a (ENSNBRG00000005105) RAB39B (ENSNBRG00000005082) ENSNBRG00000005019 ENSNBRG00000004992 rbm14a (ENSNBRG00000004960) ENSNBRG00000004929 dpp3 (ENSNBRG00000004854) ENSNBRG00000004809 ENSNBRG00000004786 ENSNBRG00000004721 znrd2 (ENSNBRG00000004693) arr3a (ENSNBRG00000004388) MCF2 (ENSNBRG00000004320) #20 f9b (ENSNBRG00000004304) #21 fgf13b (ENSNBRG00000004284) #22 afap1l1b (ENSNBRG00000004182) ablim3 (ENSNBRG00000004085) ADRB2 (ENSNBRG00000004061) ubtd2 (ENSNBRG00000004032) IL12B (ENSNBRG00000004011) ublcp1 (ENSNBRG00000003982) RNF145 (ENSNBRG00000003907) EBF1 (ENSNBRG00000003853) htatsf1 (ENSNBRG00000003818) #32 ENSNBRG00000003779 BNIP1 (ENSNBRG00000003746) CREBRF (ENSNBRG00000003698) PCYOX1L (ENSNBRG00000003661) TCERG1 (ENSNBRG00000003409) ENSNBRG00000003369 Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Anabantaria ANCESTRAL SPECIES 13 ENSGT00940000153609.a ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Zig-zag eel MODERN SPECIES 5 ENSMAMG00000021350 snx12 (ENSMAMG00000021346) slc7a3a (ENSMAMG00000021333) RAB39B (ENSMAMG00000024637) ENSMAMG00000021324 ENSMAMG00000021319 ENSMAMG00000021313 ENSMAMG00000021310 ENSMAMG00000021308 ENSMAMG00000021306 ENSMAMG00000021305 ENSMAMG00000026960 znrd2 (ENSMAMG00000021302) arr3a (ENSMAMG00000021288) f9b (ENSMAMG00000021280) #21 fgf13b (ENSMAMG00000021278) #22 ENSMAMG00000021277 ENSMAMG00000021268 ENSMAMG00000028249 ubtd2 (ENSMAMG00000021262) ENSMAMG00000021258 ublcp1 (ENSMAMG00000021251) RNF145 (ENSMAMG00000021243) EBF1 (ENSMAMG00000021229) ENSMAMG00000021225 #32 bod1 (ENSMAMG00000021222) STC2 (ENSMAMG00000028227) ENSMAMG00000021210 CREBRF (ENSMAMG00000021202) ENSMAMG00000021200 ENSMAMG00000021183 Anabantoidei ANCESTRAL SPECIES 12 ENSGT00940000164309 ENSGT00940000153609.a ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Climbing perch MODERN SPECIES 5 ENSATEG00000028363 snx12 (ENSATEG00000009896) slc7a3a (ENSATEG00000009879) ENSATEG00000009865 ENSATEG00000009786 ENSATEG00000009742 ENSATEG00000009700 ENSATEG00000009685 ENSATEG00000009590 ENSATEG00000009572 ENSATEG00000009536 znrd2 (ENSATEG00000009457) arr3a (ENSATEG00000009399) ENSATEG00000029303 #20 f9b (ENSATEG00000009307) #21 fgf13b (ENSATEG00000009279) #22 ENSATEG00000009262 ENSATEG00000009150 ENSATEG00000026283 ubtd2 (ENSATEG00000009133) IL12B (ENSATEG00000009107) ublcp1 (ENSATEG00000009067) RNF145 (ENSATEG00000009011) EBF1 (ENSATEG00000008930) ENSATEG00000008903 #32 bod1 (ENSATEG00000028746) STC2 (ENSATEG00000008869) ENSATEG00000025959 CREBRF (ENSATEG00000008829) ENSATEG00000008819 ENSATEG00000008799 Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 5 ENSBSLG00000004498 snx12 (ENSBSLG00000004502) slc7a3a (ENSBSLG00000004520) RAB39B (ENSBSLG00000004578) ENSBSLG00000004586 ENSBSLG00000004933 rbm14a (ENSBSLG00000005705) ENSBSLG00000005721 dpp3 (ENSBSLG00000005747) ENSBSLG00000005847 ENSBSLG00000006527 ENSBSLG00000006904 arr3a (ENSBSLG00000006943) MCF2 (ENSBSLG00000007277) #20 f9b (ENSBSLG00000007295) #21 fgf13b (ENSBSLG00000007304) #22 fgf13b (ENSBSLG00000007364) #22 afap1l1b (ENSBSLG00000007409) ablim3 (ENSBSLG00000007431) ENSBSLG00000007652 ubtd2 (ENSBSLG00000007655) ENSBSLG00000007661 ublcp1 (ENSBSLG00000007663) RNF145 (ENSBSLG00000007668) EBF1 (ENSBSLG00000007687) htatsf1 (ENSBSLG00000008470) #32 ENSBSLG00000008662 bod1 (ENSBSLG00000008667) STC2 (ENSBSLG00000008679) STC2 (ENSBSLG00000008694) BNIP1 (ENSBSLG00000008712) Siamese fighting fish MODERN SPECIES 5 snx12 (ENSBSLG00000004502) slc7a3a (ENSBSLG00000004520) RAB39B (ENSBSLG00000004578) ENSBSLG00000004586 ENSBSLG00000004933 rbm14a (ENSBSLG00000005705) ENSBSLG00000005721 dpp3 (ENSBSLG00000005747) ENSBSLG00000005847 ENSBSLG00000006527 ENSBSLG00000006904 arr3a (ENSBSLG00000006943) MCF2 (ENSBSLG00000007277) #20 f9b (ENSBSLG00000007295) #21 fgf13b (ENSBSLG00000007304) #22 fgf13b (ENSBSLG00000007364) #22 afap1l1b (ENSBSLG00000007409) ablim3 (ENSBSLG00000007431) ENSBSLG00000007652 ubtd2 (ENSBSLG00000007655) ENSBSLG00000007661 ublcp1 (ENSBSLG00000007663) RNF145 (ENSBSLG00000007668) EBF1 (ENSBSLG00000007687) htatsf1 (ENSBSLG00000008470) #32 ENSBSLG00000008662 bod1 (ENSBSLG00000008667) STC2 (ENSBSLG00000008679) STC2 (ENSBSLG00000008694) BNIP1 (ENSBSLG00000008712) CREBRF (ENSBSLG00000008717) Carangaria ANCESTRAL SPECIES 16 ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Pleuronectoidei ANCESTRAL SPECIES 23 ENSGT00940000153609.a ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b Tongue sole MODERN SPECIES 10 fhdc3 (ENSCSEG00000019646) trim3b (ENSCSEG00000019660) rbm14a (ENSCSEG00000019690) ENSCSEG00000019707 ENSCSEG00000019720 RAB39B (ENSCSEG00000019722) ENSCSEG00000019727 dpp3 (ENSCSEG00000019735) ENSCSEG00000019756 ENSCSEG00000019760 ENSCSEG00000019780 znrd2 (ENSCSEG00000019789) arr3a (ENSCSEG00000019793) MCF2 (ENSCSEG00000019810) #20 f9b (ENSCSEG00000019826) #21 fgf13b (ENSCSEG00000019840) #22 afap1l1b (ENSCSEG00000019859) ablim3 (ENSCSEG00000019869) ENSCSEG00000019904 ubtd2 (ENSCSEG00000019907) IL12B (ENSCSEG00000019912) ublcp1 (ENSCSEG00000019918) RNF145 (ENSCSEG00000019927) EBF1 (ENSCSEG00000019931) thoc2 (ENSCSEG00000019946) stag2a (ENSCSEG00000019962) ENSCSEG00000019978 ENSCSEG00000019987 ENSCSEG00000019993 myo1ca (ENSCSEG00000020002) ENSCSEG00000020025 Turbot MODERN SPECIES 16 ccna1 (ENSSMAG00000003232) SPART (ENSSMAG00000003187) ENSSMAG00000030244 dclk1a (ENSSMAG00000003113) RFXAP (ENSSMAG00000003100) ENSSMAG00000003066 ENSSMAG00000003042 CREBRF (ENSSMAG00000003032) ENSSMAG00000021794 STC2 (ENSSMAG00000002986) ENSSMAG00000002865 #21 ENSSMAG00000002970 #32 znrd2 (ENSSMAG00000002957) arr3a (ENSSMAG00000002928) ENSSMAG00000002888 #20 fgf13b (ENSSMAG00000002856) #22 ENSSMAG00000002828 ENSSMAG00000002722 ENSSMAG00000002705 ubtd2 (ENSSMAG00000002687) IL12B (ENSSMAG00000002666) ublcp1 (ENSSMAG00000002625) RNF145 (ENSSMAG00000002608) EBF1 (ENSSMAG00000002578) ENSSMAG00000002279 ENSSMAG00000033947 ENSSMAG00000002252 ENSSMAG00000002154 ENSSMAG00000002131 ENSSMAG00000002055 ENSSMAG00000001983 Carangaria_A ANCESTRAL SPECIES 8 ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Barramundi perch MODERN SPECIES 94 ENSLCAG00010020281 ENSLCAG00010020298 rbm14a (ENSLCAG00010020353) ENSLCAG00010020357 dpp3 (ENSLCAG00010020416) ENSLCAG00010020506 ENSLCAG00010020508 ENSLCAG00010020510 EHBP1L1 (ENSLCAG00010020515) ENSLCAG00010020519 FAM89B (ENSLCAG00010020520) znrd2 (ENSLCAG00010020521) arr3a (ENSLCAG00010020523) MCF2 (ENSLCAG00010020530) #20 f9b (ENSLCAG00010020548) #21 fgf13b (ENSLCAG00010020552) #22 afap1l1b (ENSLCAG00010020555) ablim3 (ENSLCAG00010020559) ENSLCAG00010020565 ADRB2 (ENSLCAG00010020568) ubtd2 (ENSLCAG00010020575) IL12B (ENSLCAG00010020580) ublcp1 (ENSLCAG00010020583) RNF145 (ENSLCAG00010020593) EBF1 (ENSLCAG00010020655) CLINT1 (ENSLCAG00010020851) ENSLCAG00010020854 TCERG1 (ENSLCAG00010020910) PCYOX1L (ENSLCAG00010021088) CREBRF (ENSLCAG00010021095) BNIP1 (ENSLCAG00010021103) Seriola ANCESTRAL SPECIES 2 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00940000175992 ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 ENSGT00940000161042 Yellowtail amberjack MODERN SPECIES 3182 slc7a3a (ENSSLDG00000006387) RAB39B (ENSSLDG00000006360) ENSSLDG00000006348 ENSSLDG00000006327 rbm14a (ENSSLDG00000006311) ENSSLDG00000006297 dpp3 (ENSSLDG00000006251) ENSSLDG00000006236 ENSSLDG00000006214 ENSSLDG00000006034 FAM89B (ENSSLDG00000005992) znrd2 (ENSSLDG00000005954) arr3a (ENSSLDG00000005892) MCF2 (ENSSLDG00000005831) #20 f9b (ENSSLDG00000005785) #21 fgf13b (ENSSLDG00000005756) #22 afap1l1b (ENSSLDG00000005707) ablim3 (ENSSLDG00000005644) ADRB2 (ENSSLDG00000005630) ubtd2 (ENSSLDG00000005600) IL12B (ENSSLDG00000005564) ublcp1 (ENSSLDG00000005505) RNF145 (ENSSLDG00000005450) EBF1 (ENSSLDG00000005360) Greater amberjack MODERN SPECIES 15 RAB39B (ENSSDUG00000020806) ENSSDUG00000020804 ENSSDUG00000020799 ENSSDUG00000020778 rbm14a (ENSSDUG00000020756) ENSSDUG00000020744 dpp3 (ENSSDUG00000020699) ENSSDUG00000020686 ENSSDUG00000020670 ENSSDUG00000020657 FAM89B (ENSSDUG00000020652) znrd2 (ENSSDUG00000020640) arr3a (ENSSDUG00000020460) MCF2 (ENSSDUG00000020394) #20 f9b (ENSSDUG00000020377) #21 fgf13b (ENSSDUG00000020368) #22 afap1l1b (ENSSDUG00000020317) ablim3 (ENSSDUG00000020212) ADRB2 (ENSSDUG00000020160) ubtd2 (ENSSDUG00000020150) IL12B (ENSSDUG00000020130) ublcp1 (ENSSDUG00000020092) RNF145 (ENSSDUG00000020056) EBF1 (ENSSDUG00000020020) htatsf1 (ENSSDUG00000020002) #32 ENSSDUG00000019984 STC2 (ENSSDUG00000019965) BNIP1 (ENSSDUG00000019948) CREBRF (ENSSDUG00000019886) PCYOX1L (ENSSDUG00000019862) TCERG1 (ENSSDUG00000019753) Eupercaria ANCESTRAL SPECIES 17 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Tetraodontidae ANCESTRAL SPECIES 6 ENSGT00390000014725.r.b ENSGT00940000165230.b ENSGT00390000005712 ENSGT00440000034259.b ENSGT00940000155453 ENSGT00940000153733.A ENSGT00940000164751.b ENSGT00940000153997.b.a.b.c.b ENSGT00390000000214.a.a.f ENSGT00940000155158.q.b ENSGT00510000047299.c ENSGT00940000163509.b ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00390000013169 ENSGT00940000161027.a ENSGT00390000004124.i ENSGT00940000156996.f.b ENSGT00390000007335 ENSGT00940000165459.b ENSGT00940000157436.b ENSGT00950000183068.a.a.a.a ENSGT00940000158132.m.b ENSGT00940000154651.a ENSGT00940000153609.a ENSGT00940000164309 ENSGT00940000153460.c.b.c.b #37 Tetraodon MODERN SPECIES 26 ENSTNIG00000019808 ENSTNIG00000019529 ENSTNIG00000019491 ENSTNIG00000019610 ENSTNIG00000019601 ENSTNIG00000019465 ENSTNIG00000001538 pik3r1 (ENSTNIG00000019477) ENSTNIG00000001635 ENSTNIG00000019524 ENSTNIG00000019532 ENSTNIG00000019551 ENSTNIG00000001883 ENSTNIG00000019825 ENSTNIG00000019658 FGF13 (ENSTNIG00000019669) #22 edar (ENSTNIG00000019463) ENSTNIG00000019649 ENSTNIG00000019648 ENSTNIG00000019608 ENSTNIG00000019588 ENSTNIG00000019738 ENSTNIG00000001058 ENSTNIG00000019819 b3gnt5a (ENSTNIG00000019824) ENSTNIG00000019556 ENSTNIG00000019571 cyp17a2 (ENSTNIG00000019472) ENSTNIG00000000502 ENSTNIG00000001337 nr2f1a (ENSTNIG00000019820) Fugu MODERN SPECIES 6 TRAPPC14 (ENSTRUG00000002339) rap1gap2b (ENSTRUG00000002741) ncbp3 (ENSTRUG00000003769) pcf11 (ENSTRUG00000004419) ccdc90b (ENSTRUG00000004783) guca1d (ENSTRUG00000005393) dub (ENSTRUG00000021750) stim1b (ENSTRUG00000005578) rhogb (ENSTRUG00000029154) pgap2 (ENSTRUG00000005742) ENSTRUG00000024103 zgc:56585 (ENSTRUG00000005890) arr3a (ENSTRUG00000005945) MCF2 (ENSTRUG00000006824) #20 f9b (ENSTRUG00000007324) #21 fgf13b (ENSTRUG00000007939) #22 afap1l1b (ENSTRUG00000008171) ABLIM3 (ENSTRUG00000027401) znrd2 (ENSTRUG00000008927) ENSTRUG00000021318 ENSTRUG00000026511 ENSTRUG00000024781 dpp3 (ENSTRUG00000009234) ENSTRUG00000023698 rbm14a (ENSTRUG00000009504) ENSTRUG00000009540 RAB39B (ENSTRUG00000009928) slc7a3 (ENSTRUG00000009937) snx12 (ENSTRUG00000010136) il2rg (ENSTRUG00000010161) slc9a6b (ENSTRUG00000010179) #37 Eupecaria_A ANCESTRAL SPECIES 17 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Ballan wrasse MODERN SPECIES 801 FAM89B (ENSLBEG00000006047) znrd2 (ENSLBEG00000006073) arr3a (ENSLBEG00000006150) MCF2 (ENSLBEG00000006294) #20 f9b (ENSLBEG00000006344) #21 fgf13b (ENSLBEG00000006401) #22 afap1l1b (ENSLBEG00000006438) ablim3 (ENSLBEG00000006506) Eupecaria_B ANCESTRAL SPECIES 17 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Perciformes ANCESTRAL SPECIES 22 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Cottioidei ANCESTRAL SPECIES 10 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Lumpfish MODERN SPECIES 5 slc7a3a (ENSCLMG00005005632) RAB39B (ENSCLMG00005005631) ENSCLMG00005005609 ENSCLMG00005005607 rbm14a (ENSCLMG00005005605) ENSCLMG00005005604 dpp3 (ENSCLMG00005005471) ENSCLMG00005005451 ENSCLMG00005005288 EHBP1L1 (ENSCLMG00005005276) FAM89B (ENSCLMG00005005274) znrd2 (ENSCLMG00005005273) arr3a (ENSCLMG00005005270) MCF2 (ENSCLMG00005005267) #20 f9b (ENSCLMG00005005044) #21 fgf13b (ENSCLMG00005005005) #22 afap1l1b (ENSCLMG00005004996) ABLIM3 (ENSCLMG00005004981) ADRB2 (ENSCLMG00005004873) ubtd2 (ENSCLMG00005004863) IL12B (ENSCLMG00005004829) ublcp1 (ENSCLMG00005004823) RNF145 (ENSCLMG00005004819) EBF1 (ENSCLMG00005004801) htatsf1 (ENSCLMG00005004701) #32 bod1 (ENSCLMG00005004676) STC2 (ENSCLMG00005004659) BNIP1 (ENSCLMG00005004636) CREBRF (ENSCLMG00005004612) PCYOX1L (ENSCLMG00005004338) TCERG1 (ENSCLMG00005014974) Stickleback MODERN SPECIES 7 snx12 (ENSGACG00000020435) slc7a3a (ENSGACG00000020436) RAB39B (ENSGACG00000020437) ENSGACG00000020438 ENSGACG00000020439 rbm14a (ENSGACG00000020440) dpp3 (ENSGACG00000020441) ENSGACG00000020442 ENSGACG00000020443 ENSGACG00000020444 znrd2 (ENSGACG00000020445) arr3a (ENSGACG00000020446) MCF2 (ENSGACG00000020447) #20 ENSGACG00000020448 f9b (ENSGACG00000020449) #21 fgf13b (ENSGACG00000020450) #22 afap1l1b (ENSGACG00000020451) ablim3 (ENSGACG00000020452) ADRB2 (ENSGACG00000020453) ubtd2 (ENSGACG00000020454) IL12B (ENSGACG00000020455) ublcp1 (ENSGACG00000020456) RNF145 (ENSGACG00000020457) EBF1 (ENSGACG00000020458) htatsf1 (ENSGACG00000020459) #32 bod1 (ENSGACG00000020460) BNIP1 (ENSGACG00000020461) CREBRF (ENSGACG00000020462) PCYOX1L (ENSGACG00000020463) TCERG1 (ENSGACG00000020464) ENSGACG00000020465 Perciformes_a ANCESTRAL SPECIES 20 ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000179094 ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b ENSGT00940000157770 Channel bull blenny MODERN SPECIES 5 slc7a3a (ENSCGOG00000005952) RAB39B (ENSCGOG00000005942) ENSCGOG00000005940 ENSCGOG00000003802 rbm14a (ENSCGOG00000003732) ENSCGOG00000003731 dpp3 (ENSCGOG00000002275) ENSCGOG00000002251 ENSCGOG00000002218 ENSCGOG00000002205 FAM89B (ENSCGOG00000002201) znrd2 (ENSCGOG00000002199) arr3a (ENSCGOG00000002149) MCF2 (ENSCGOG00000002108) #20 f9b (ENSCGOG00000002069) #21 fgf13b (ENSCGOG00000002054) #22 afap1l1b (ENSCGOG00000002048) ablim3 (ENSCGOG00000002042) ADRB2 (ENSCGOG00000002027) ubtd2 (ENSCGOG00000002024) IL12B (ENSCGOG00000002018) ublcp1 (ENSCGOG00000001909) RNF145 (ENSCGOG00000001840) EBF1 (ENSCGOG00000001634) htatsf1 (ENSCGOG00000014980) #32 bod1 (ENSCGOG00000014976) STC2 (ENSCGOG00000014964) BNIP1 (ENSCGOG00000014957) CREBRF (ENSCGOG00000014949) PCYOX1L (ENSCGOG00000014943) TCERG1 (ENSCGOG00000014714) Pike perch MODERN SPECIES 54 RAB39B (ENSSLUG00000025071) ENSSLUG00000025075 ENSSLUG00000025078 rbm14a (ENSSLUG00000001525) ENSSLUG00000001536 dpp3 (ENSSLUG00000001703) ENSSLUG00000001803 ENSSLUG00000001816 ENSSLUG00000001820 ENSSLUG00000001830 FAM89B (ENSSLUG00000001839) znrd2 (ENSSLUG00000001844) arr3a (ENSSLUG00000001877) MCF2 (ENSSLUG00000001968) #20 f9b (ENSSLUG00000001995) #21 fgf13b (ENSSLUG00000002001) #22 afap1l1b (ENSSLUG00000002083) ablim3 (ENSSLUG00000002122) ADRB2 (ENSSLUG00000002154) ubtd2 (ENSSLUG00000002159) IL12B (ENSSLUG00000002170) ublcp1 (ENSSLUG00000002180) RNF145 (ENSSLUG00000002193) EBF1 (ENSSLUG00000002218) htatsf1 (ENSSLUG00000002251) #32 bod1 (ENSSLUG00000002291) STC2 (ENSSLUG00000002300) BNIP1 (ENSSLUG00000002323) CREBRF (ENSSLUG00000002328) PCYOX1L (ENSSLUG00000002331) TCERG1 (ENSSLUG00000002376) Eupecaria_C ANCESTRAL SPECIES 15 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.b ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00390000011206.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 12 ENSGT00940000154651.a ENSGT00940000158132.m.b ENSGT00940000165121.a ENSGT00950000183068.a.a.a.a ENSGT00940000157436.b ENSGT00940000165459.b ENSGT00390000007335 ENSGT00940000156996.f.b ENSGT00390000004124.i ENSGT00940000161027.a ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00950000182887.C.b.b.a ENSGT00940000156974.e.b #20 ENSGT00940000159516 #21 ENSGT00940000162313.b #22 ENSGT00950000183067.a.b.a.c ENSGT00950000182850.a.b.a.b.b ENSGT00950000182850.a.b.a.b.a.a ENSGT00940000159538.h ENSGT00940000156641 ENSGT00390000012630.A.a ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b.d.c.b ENSGT00390000009902 #32 ENSGT00940000156198.c.b ENSGT00390000005989.a.b.a.b ENSGT00390000014412.k ENSGT00390000007125.b ENSGT00940000157770 Large yellow croaker MODERN SPECIES 493 ENSLCRG00005018536 ENSLCRG00005018537 ENSLCRG00005018538 ENSLCRG00005018539 rbm14a (ENSLCRG00005018544) ENSLCRG00005018549 ENSLCRG00005018551 dpp3 (ENSLCRG00005018553) afap1l1b (ENSLCRG00005018707) ENSLCRG00005018711 FAM89B (ENSLCRG00005018713) znrd2 (ENSLCRG00005018715) arr3a (ENSLCRG00005018717) MCF2 (ENSLCRG00005018752) #20 f9b (ENSLCRG00005019337) #21 fgf13b (ENSLCRG00005019464) #22 ABLIM3 (ENSLCRG00005019538) ENSLCRG00005019539 ADRB2 (ENSLCRG00005019541) ENSLCRG00005012353 tmem120aa (ENSLCRG00005012358) ENSLCRG00005012919 CBL (ENSLCRG00005012940) alkbh4 (ENSLCRG00005013029) lrwd1 (ENSLCRG00005013031) bckdk (ENSLCRG00005013039) orai2 (ENSLCRG00005013052) USP28 (ENSLCRG00005013073) HTR3B (ENSLCRG00005014248) HTR3A (ENSLCRG00005014249) zbtb16a (ENSLCRG00005014289) European seabass MODERN SPECIES 4 ENSDLAG00005026614 slc7a3a (ENSDLAG00005002361) ENSDLAG00005002305 ENSDLAG00005029067 ENSDLAG00005002017 ENSDLAG00005001969 ENSDLAG00005001966 ENSDLAG00005001861 ENSDLAG00005001837 ENSDLAG00005001826 ENSDLAG00005029223 ENSDLAG00005027186 arr3a (ENSDLAG00005001553) MCF2 (ENSDLAG00005001180) #20 f9b (ENSDLAG00005028462) #21 fgf13b (ENSDLAG00005001154) #22 ENSDLAG00005001131 ENSDLAG00005001118 ENSDLAG00005001112 ubtd2 (ENSDLAG00005034075) IL12B (ENSDLAG00005001099) ublcp1 (ENSDLAG00005001095) RNF145 (ENSDLAG00005001084) EBF1 (ENSDLAG00005001006) ENSDLAG00005000984 #32 ENSDLAG00005029702 BNIP1 (ENSDLAG00005028746) ENSDLAG00005034378 ENSDLAG00005031176 ENSDLAG00005000752 ENSDLAG00005000723 Gilthead seabream MODERN SPECIES 4 slc7a3a (ENSSAUG00010010264) RAB39B (ENSSAUG00010011241) ENSSAUG00010011243 ENSSAUG00010011248 f9b (ENSSAUG00010011257) #21 rbm14a (ENSSAUG00010011259) ENSSAUG00010011260 dpp3 (ENSSAUG00010011265) ENSSAUG00010011359 ENSSAUG00010011361 ENSSAUG00010011366 FAM89B (ENSSAUG00010011372) znrd2 (ENSSAUG00010011373) arr3a (ENSSAUG00010011383) ENSSAUG00010011795 #20 fgf13b (ENSSAUG00010011799) #22 afap1l1b (ENSSAUG00010011804) ablim3 (ENSSAUG00010011815) ENSSAUG00010011821 ADRB2 (ENSSAUG00010011822) ubtd2 (ENSSAUG00010011825) IL12B (ENSSAUG00010011827) ublcp1 (ENSSAUG00010011828) RNF145 (ENSSAUG00010011831) EBF1 (ENSSAUG00010011838) crcp (ENSSAUG00010011882) CLINT1 (ENSSAUG00010011892) TCERG1 (ENSSAUG00010011896) PCYOX1L (ENSSAUG00010011914) CREBRF (ENSSAUG00010011917) BNIP1 (ENSSAUG00010011920) Pinecone sodierfish MODERN SPECIES 5 RAB39B (ENSMMDG00005012980) ENSMMDG00005012982 ENSMMDG00005012984 ENSMMDG00005012987 ENSMMDG00005012990 dpp3 (ENSMMDG00005013042) ENSMMDG00005014507 ENSMMDG00005014511 ENSMMDG00005014515 FAM89B (ENSMMDG00005014550) znrd2 (ENSMMDG00005014553) ENSMMDG00005014557 arr3a (ENSMMDG00005014566) MCF2 (ENSMMDG00005014684) #20 f9b (ENSMMDG00005014696) #21 fgf13b (ENSMMDG00005014772) #22 afap1l1b (ENSMMDG00005014778) ablim3 (ENSMMDG00005014796) ENSMMDG00005014873 ubtd2 (ENSMMDG00005014952) ENSMMDG00005014953 ublcp1 (ENSMMDG00005014958) RNF145 (ENSMMDG00005014960) EBF1 (ENSMMDG00005015002) CLINT1 (ENSMMDG00005015146) ENSMMDG00005015150 TCERG1 (ENSMMDG00005015160) PCYOX1L (ENSMMDG00005016352) CREBRF (ENSMMDG00005016358) BNIP1 (ENSMMDG00005016363) STC2 (ENSMMDG00005016367) Cod MODERN SPECIES 20 ENSGMOG00000010773 snx12 (ENSGMOG00000010785) slc7a3a (ENSGMOG00000010793) ENSGMOG00000010808 ENSGMOG00000010816 ENSGMOG00000010840 ENSGMOG00000034818 ENSGMOG00000030070 ENSGMOG00000036016 ENSGMOG00000010874 ENSGMOG00000010941 znrd2 (ENSGMOG00000033688) arr3a (ENSGMOG00000010969) MCF2 (ENSGMOG00000010978) #20 f9b (ENSGMOG00000022348) #21 fgf13b (ENSGMOG00000011012) #22 ENSGMOG00000011023 ENSGMOG00000011042 ENSGMOG00000011065 ENSGMOG00000032640 ubtd2 (ENSGMOG00000023849) ENSGMOG00000011082 ublcp1 (ENSGMOG00000011094) RNF145 (ENSGMOG00000011104) ENSGMOG00000023755 ENSGMOG00000036187 ENSGMOG00000016505 ENSGMOG00000016493 CREBRF (ENSGMOG00000025090) ENSGMOG00000016467 STC2 (ENSGMOG00000024586) Reedfish MODERN SPECIES 3 ENSECRG00000013759 DLG3 (ENSECRG00000013706) GDPD2 (ENSECRG00000013684) ENSECRG00000013625 pdzd11 (ENSECRG00000013602) ENSECRG00000013589 RAB41 (ENSECRG00000013553) arr3b (ENSECRG00000013526) inppl1b (ENSECRG00000013484) P2RY4 (ENSECRG00000013459) sox3 (ENSECRG00000013450) #17 ENSECRG00000013436 ATP11C (ENSECRG00000013353) #19 MCF2 (ENSECRG00000013291) #20 f9b (ENSECRG00000013263) #21 fgf13a (ENSECRG00000013245) #22 zic6 (ENSECRG00000013228) zic3 (ENSECRG00000013215) #24 GPR101 (ENSECRG00000013184) #25 rbmx (ENSECRG00000013143) ARHGEF6 (ENSECRG00000013058) #28 CD40LG (ENSECRG00000013030) #29 ENSECRG00000013022 ENSECRG00000013013 htatsf1 (ENSECRG00000012991) #32 BRS3 (ENSECRG00000012972) #33 ENSECRG00000012952 ENSECRG00000012928 MAP7D3 (ENSECRG00000012834) #35 fhl1b (ENSECRG00000012785) #36 slc9a6b (ENSECRG00000012652) #37