Hystricomorpha	ANCESTRAL SPECIES	27	ENSGT00940000154507	ENSGT00390000014316.c.b	ENSGT00390000012721.a	ENSGT00950000183055.b.b	ENSGT00940000160557	ENSGT00940000157254	ENSGT00940000156385	ENSGT00940000153168.C.a.a	ENSGT00940000156071	ENSGT00950000182810.A.b #15	ENSGT00940000158849 #16	ENSGT00940000160067 #17	ENSGT00940000160864 #18	ENSGT00390000012163 #19	ENSGT00510000046929.b #21	ENSGT00940000160880 #22	ENSGT00940000157770	ENSGT01030000234518.A.a.b #24	ENSGT00950000182864.a.b.b.a.b.a.b #27	ENSGT00940000158185 #28	ENSGT01030000234527.A.a.b.b.a #29	ENSGT00940000153713.B.d #30	ENSGT00530000064228	ENSGT00420000029848.B #31	ENSGT00390000011484 #32	ENSGT00510000048608 #33	ENSGT00940000162856	ENSGT00530000064225 #35	ENSGT00740000116871 #36	ENSGT00940000165308	ENSGT00940000161876 #37
Hystricomorpha_a	ANCESTRAL SPECIES	24	ENSGT00940000154507	ENSGT00390000014316.c.b	ENSGT00390000012721.a	ENSGT00950000183055.b.b	ENSGT00940000160557	ENSGT00940000157254	ENSGT00940000156385	ENSGT00940000153168.C.a.a	ENSGT00940000156071	ENSGT00950000182810.A.b #15	ENSGT00940000158849 #16	ENSGT00940000160067 #17	ENSGT00940000160864 #18	ENSGT00390000012163 #19	ENSGT00510000046929.b #21	ENSGT00940000160880 #22	ENSGT00940000157770	ENSGT01030000234518.A.a.b #24	ENSGT00950000182864.a.b.b.a.b.a.b #27	ENSGT00940000158185 #28	ENSGT01030000234527.A.a.b.b.a #29	ENSGT00940000153713.B.d #30	ENSGT00530000064228	ENSGT00420000029848.B #31	ENSGT00390000011484 #32	ENSGT00510000048608 #33	ENSGT00940000162856	ENSGT00530000064225 #35	ENSGT00740000116871 #36	ENSGT00940000165308	ENSGT00940000161876 #37
Hystricomorpha_b	ANCESTRAL SPECIES	57	ENSGT00940000154507	ENSGT00390000014316.c.b	ENSGT00390000012721.a	ENSGT00950000183055.b.b	ENSGT00940000160557	ENSGT00940000157254	ENSGT00940000156385	ENSGT00940000153168.C.a.a	ENSGT00940000156071	ENSGT00950000182810.A.b #15	ENSGT00940000158849 #16	ENSGT00940000160067 #17	ENSGT00940000160864 #18	ENSGT00390000012163 #19	ENSGT00510000046929.b #21	ENSGT00940000160880 #22	ENSGT00940000157770	ENSGT01030000234518.A.a.b #24	ENSGT00950000182864.a.b.b.a.b.a.b #27	ENSGT00940000158185 #28	ENSGT01030000234527.A.a.b.b.a #29	ENSGT00940000153713.B.d #30	ENSGT00530000064228	ENSGT00420000029848.B #31	ENSGT00390000011484 #32	ENSGT00510000048608 #33	ENSGT00530000064225 #35	ENSGT00740000116871 #36	ENSGT00940000161876 #37	ENSGT00860000135710	ENSGT00390000013163
Degu	MODERN SPECIES	81									PRELID2 (ENSODEG00000004368) #15	ENSODEG00000004745 #16	SH3RF2 (ENSODEG00000004928) #17	PLAC8L1 (ENSODEG00000004487) #18	LARS1 (ENSODEG00000004882) #19	ENSODEG00000019222 #20	RBM27 (ENSODEG00000005515) #21	POU4F3 (ENSODEG00000005618) #22	ENSODEG00000005828 #23	GPR151 (ENSODEG00000004751) #24	ENSODEG00000004878 #25	ENSODEG00000019124 #26	PPP2R2B (ENSODEG00000004739) #27	STK32A (ENSODEG00000004575) #28	ENSODEG00000005091 #29	JAKMIP2 (ENSODEG00000004578) #30	SCGB3A2 (ENSODEG00000006603) #31	C5orf46 (ENSODEG00000006859) #32	SPINK5 (ENSODEG00000005846) #33	ENSODEG00000019231 #34	SPINK6 (ENSODEG00000005901) #35	ENSODEG00000005177 #36	SPINK7 (ENSODEG00000005558) #37
Long-tailed chinchilla	MODERN SPECIES	122	FGF1 (ENSCLAG00000009907)	ARHGAP26 (ENSCLAG00000012088)	NR3C1 (ENSCLAG00000009640)	ENSCLAG00000011558	YIPF5 (ENSCLAG00000011264)	KCTD16 (ENSCLAG00000011042)	PRELID2 (ENSCLAG00000016109) #15	GRXCR2 (ENSCLAG00000014652) #16	ENSCLAG00000014607	SH3RF2 (ENSCLAG00000014809) #17	PLAC8L1 (ENSCLAG00000016637) #18	ENSCLAG00000011566	LARS1 (ENSCLAG00000011193) #19	RBM27 (ENSCLAG00000016106) #21	ENSCLAG00000011866	POU4F3 (ENSCLAG00000011451) #22	TCERG1 (ENSCLAG00000015689)	GPR151 (ENSCLAG00000015992) #24	PPP2R2B (ENSCLAG00000010669) #27	STK32A (ENSCLAG00000009888) #28	DPYSL3 (ENSCLAG00000011589) #29	ENSCLAG00000010255 #30	SPINK1 (ENSCLAG00000009591)	SCGB3A2 (ENSCLAG00000012325) #31	C5orf46 (ENSCLAG00000013364) #32	SPINK5 (ENSCLAG00000010015) #33	SPINK6 (ENSCLAG00000010382) #35	SPINK7 (ENSCLAG00000012052) #37	ENSCLAG00000011836	FBXO38 (ENSCLAG00000011431)	HTR4 (ENSCLAG00000010344)
Guinea pig	MODERN SPECIES	6	RNF14 (ENSCPOG00000002723)	GNPDA1 (ENSCPOG00000002726)	NDFIP1 (ENSCPOG00000009399)	SPRY4 (ENSCPOG00000039083)	FGF1 (ENSCPOG00000034859)	ARHGAP26 (ENSCPOG00000008244)	NR3C1 (ENSCPOG00000005188)	YIPF5 (ENSCPOG00000030944)	KCTD16 (ENSCPOG00000009247)	PRELID2 (ENSCPOG00000036397) #15	GRXCR2 (ENSCPOG00000003348) #16	SH3RF2 (ENSCPOG00000012171) #17	PLAC8L1 (ENSCPOG00000012172) #18	LARS1 (ENSCPOG00000012329) #19	RBM27 (ENSCPOG00000002498) #21	POU4F3 (ENSCPOG00000025610) #22	TCERG1 (ENSCPOG00000003041)	GPR151 (ENSCPOG00000003044) #24	PPP2R2B (ENSCPOG00000003335) #27	STK32A (ENSCPOG00000007977) #28	DPYSL3 (ENSCPOG00000007983) #29	JAKMIP2 (ENSCPOG00000001839) #30	SPINK1 (ENSCPOG00000010443)	C5orf46 (ENSCPOG00000010594) #32	SPINK5 (ENSCPOG00000014264) #33	SPINK14 (ENSCPOG00000021753)	SPINK6 (ENSCPOG00000007875) #35	ENSCPOG00000032360 #36	ENSCPOG00000008611	SPINK7 (ENSCPOG00000027129) #37	ENSCPOG00000033815
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000042339	ENSHGLG00000006088	ENSHGLG00000042921	ENSHGLG00000034660	ENSHGLG00000035164	ENSHGLG00000033590	ENSHGLG00000048782	PRELID2 (ENSHGLG00000041523) #15	GRXCR2 (ENSHGLG00000005488) #16	Sh3rf2 (ENSHGLG00000004265) #17	PLAC8L1 (ENSHGLG00000006179) #18	LARS1 (ENSHGLG00000006937) #19	ENSHGLG00000003473	ENSHGLG00000045331	RBM27 (ENSHGLG00000004076) #21	POU4F3 (ENSHGLG00000037373) #22	TCERG1 (ENSHGLG00000007525)	GPR151 (ENSHGLG00000048892) #24	PPP2R2B (ENSHGLG00000013794) #27	ENSHGLG00000006154	STK32A (ENSHGLG00000036345) #28	DPYSL3 (ENSHGLG00000013479) #29	JAKMIP2 (ENSHGLG00000007253) #30	SPINK1 (ENSHGLG00000007963)	SCGB3A2 (ENSHGLG00000008613) #31	C5orf46 (ENSHGLG00000041931) #32	ENSHGLG00000009289	ENSHGLG00000034049	SPINK5 (ENSHGLG00000004049) #33	SPINK6 (ENSHGLG00000004409) #35	MARCOL (ENSHGLG00000006214) #36