Hystricomorpha_a	ANCESTRAL SPECIES	24	ENSGT00940000154507	ENSGT00390000014316.c.b	ENSGT00390000012721.a	ENSGT00950000183055.b.b	ENSGT00940000160557 #7	ENSGT00940000157254 #8	ENSGT00940000156385 #9	ENSGT00940000153168.C.a.a #11	ENSGT00940000156071 #12	ENSGT00950000182810.A.b #13	ENSGT00940000158849 #14	ENSGT00940000160067 #16	ENSGT00940000160864 #17	ENSGT00390000012163 #19	ENSGT00510000046929.b #20	ENSGT00940000160880 #22	ENSGT00940000157770 #23	ENSGT01030000234518.A.a.b #24	ENSGT00950000182864.a.b.b.a.b.a.b #25	ENSGT00940000158185 #26	ENSGT01030000234527.A.a.b.b.a #27	ENSGT00940000153713.B.d #28	ENSGT00530000064228 #29	ENSGT00420000029848.B #30	ENSGT00390000011484 #31	ENSGT00510000048608 #32	ENSGT00940000162856	ENSGT00530000064225 #33	ENSGT00740000116871	ENSGT00940000165308	ENSGT00940000161876 #34
Hystricomorpha_b	ANCESTRAL SPECIES	57	ENSGT00940000154507	ENSGT00390000014316.c.b	ENSGT00390000012721.a	ENSGT00950000183055.b.b	ENSGT00940000160557 #7	ENSGT00940000157254 #8	ENSGT00940000156385 #9	ENSGT00940000153168.C.a.a #11	ENSGT00940000156071 #12	ENSGT00950000182810.A.b #13	ENSGT00940000158849 #14	ENSGT00940000160067 #16	ENSGT00940000160864 #17	ENSGT00390000012163 #19	ENSGT00510000046929.b #20	ENSGT00940000160880 #22	ENSGT00940000157770 #23	ENSGT01030000234518.A.a.b #24	ENSGT00950000182864.a.b.b.a.b.a.b #25	ENSGT00940000158185 #26	ENSGT01030000234527.A.a.b.b.a #27	ENSGT00940000153713.B.d #28	ENSGT00530000064228 #29	ENSGT00420000029848.B #30	ENSGT00390000011484 #31	ENSGT00510000048608 #32	ENSGT00530000064225 #33	ENSGT00740000116871	ENSGT00940000161876 #34	ENSGT00860000135710 #35	ENSGT00390000013163 #36
Long-tailed chinchilla	MODERN SPECIES	122	FGF1 (ENSCLAG00000009907) #7	ARHGAP26 (ENSCLAG00000012088) #8	NR3C1 (ENSCLAG00000009640) #9	ENSCLAG00000011558 #10	YIPF5 (ENSCLAG00000011264) #11	KCTD16 (ENSCLAG00000011042) #12	PRELID2 (ENSCLAG00000016109) #13	GRXCR2 (ENSCLAG00000014652) #14	ENSCLAG00000014607 #15	SH3RF2 (ENSCLAG00000014809) #16	PLAC8L1 (ENSCLAG00000016637) #17	ENSCLAG00000011566 #18	LARS1 (ENSCLAG00000011193) #19	RBM27 (ENSCLAG00000016106) #20	ENSCLAG00000011866 #21	POU4F3 (ENSCLAG00000011451) #22	TCERG1 (ENSCLAG00000015689) #23	GPR151 (ENSCLAG00000015992) #24	PPP2R2B (ENSCLAG00000010669) #25	STK32A (ENSCLAG00000009888) #26	DPYSL3 (ENSCLAG00000011589) #27	ENSCLAG00000010255 #28	SPINK1 (ENSCLAG00000009591) #29	SCGB3A2 (ENSCLAG00000012325) #30	C5orf46 (ENSCLAG00000013364) #31	SPINK5 (ENSCLAG00000010015) #32	SPINK6 (ENSCLAG00000010382) #33	SPINK7 (ENSCLAG00000012052) #34	ENSCLAG00000011836 #35	FBXO38 (ENSCLAG00000011431) #36	HTR4 (ENSCLAG00000010344) #37