Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00390000013517 #12	ENSGT00500000044831.a.a.b #11	ENSGT00940000158850 #13	ENSGT00940000162063	ENSGT00940000154444.B #14	ENSGT00940000154444.A ##14	ENSGT00940000159345 #15	ENSGT00940000161609	ENSGT00940000158509 #16	ENSGT00390000002110 #17	ENSGT00620000088064 #18	ENSGT00390000000080.a.b #19	ENSGT00940000157328.C #20	ENSGT00950000183345	ENSGT00940000159577 #21	ENSGT00940000161111 #22	ENSGT00390000006633.a #23	ENSGT00940000156690 #24	ENSGT00390000011576.b #25	ENSGT00390000010054.a #26	ENSGT00940000157342 #27	ENSGT01100000263484.A.d #29	ENSGT00940000159047 #30	ENSGT00390000011365.a #31	ENSGT00940000162517 #32	ENSGT00510000046787.e.b #33	ENSGT00940000158507 #35	ENSGT00940000156583 #36	ENSGT00940000162044 #37	ENSGT00940000162406	ENSGT00390000003288
Sciuridae	ANCESTRAL SPECIES	33	ENSGT00940000159087 #10	ENSGT00500000044831.a.a.b #11	ENSGT00390000013517 #12	ENSGT00940000158850 #13	ENSGT00940000162063	ENSGT00940000154444.B #14	ENSGT00940000154444.A ##14	ENSGT00940000159345 #15	ENSGT00940000161609	ENSGT00940000158509 #16	ENSGT00390000002110 #17	ENSGT00620000088064 #18	ENSGT00390000000080.a.b #19	ENSGT00940000157328.C #20	ENSGT00940000159577 #21	ENSGT00940000161111 #22	ENSGT00390000006633.a #23	ENSGT00940000156690 #24	ENSGT00390000011576.b #25	ENSGT00390000010054.a #26	ENSGT00940000157342 #27	ENSGT01100000263484.A.d.b #28	ENSGT01100000263484.A.d.a #29	ENSGT00940000159047 #30	ENSGT00390000011365.a #31	ENSGT00940000162517 #32	ENSGT00510000046787.e.b #33	ENSGT00940000158507 #35	ENSGT00940000156583 #36	ENSGT00940000162044 #37	ENSGT00940000162406
Marmotini	ANCESTRAL SPECIES	38	ENSGT00500000044831.a.a.b #11	ENSGT00390000013517 #12	ENSGT00940000158850 #13	ENSGT00940000162063	ENSGT00940000154444.B #14	ENSGT00940000154444.A ##14	ENSGT00940000159345 #15	ENSGT00940000161609	ENSGT00940000163365.a	ENSGT00940000158509 #16	ENSGT00390000002110 #17	ENSGT00620000088064 #18	ENSGT00390000000080.a.b #19	ENSGT00940000157328.C #20	ENSGT00940000159577 #21	ENSGT00940000161111 #22	ENSGT00390000006633.a #23	ENSGT00940000156690 #24	ENSGT00390000011576.b #25	ENSGT00390000010054.a #26	ENSGT00940000157342 #27	ENSGT01100000263484.A.d.b #28	ENSGT01100000263484.A.d.a #29	ENSGT00940000159047 #30	ENSGT00390000011365.a #31	ENSGT00940000162517 #32	ENSGT00510000046787.e.b #33	ENSGT00940000154772.bb #34	ENSGT00940000158507 #35	ENSGT00940000156583 #36	ENSGT00940000162044 #37
Marmotini_b	ANCESTRAL SPECIES	96	ENSGT00500000044831.a.a.b #11	ENSGT00390000013517 #12	ENSGT00940000158850 #13	ENSGT00940000162063	ENSGT00940000154444.B #14	ENSGT00940000154444.A ##14	ENSGT00940000159345 #15	ENSGT00940000161609	ENSGT00940000163365.a	ENSGT00940000158509 #16	ENSGT00390000002110 #17	ENSGT00620000088064 #18	ENSGT00390000000080.a.b #19	ENSGT00940000157328.C #20	ENSGT00940000159577 #21	ENSGT00940000161111 #22	ENSGT00390000006633.a #23	ENSGT00940000156690 #24	ENSGT00390000011576.b #25	ENSGT00390000010054.a #26	ENSGT00940000157342 #27	ENSGT01100000263484.A.d.b #28	ENSGT01100000263484.A.d.a #29	ENSGT00940000159047 #30	ENSGT00390000011365.a #31	ENSGT00940000162517 #32	ENSGT00510000046787.e.b #33	ENSGT00940000154772.bb #34	ENSGT00940000158507 #35	ENSGT00940000156583 #36	ENSGT00940000162044 #37
Squirrel	MODERN SPECIES	115	SOX30 (ENSSTOG00000014216) #7	THG1L (ENSSTOG00000014243) #8	ENSSTOG00000020480 #9	NIPAL4 (ENSSTOG00000001828) #10	CYFIP2 (ENSSTOG00000009237) #11	FNDC9 (ENSSTOG00000029017) #12	ITK (ENSSTOG00000009223) #13	MED7 (ENSSTOG00000009218) #14	ENSSTOG00000026317 #15	SGCD (ENSSTOG00000004356) #16	MRPL22 (ENSSTOG00000005822) #17	GEMIN5 (ENSSTOG00000005759) #18	ENSSTOG00000005745 #19	FAXDC2 (ENSSTOG00000005732) #20	LARP1 (ENSSTOG00000005678) #21	HAND1 (ENSSTOG00000025850) #22	SAP30L (ENSSTOG00000020584) #23	GALNT10 (ENSSTOG00000008893) #24	MFAP3 (ENSSTOG00000006964) #25	FAM114A2 (ENSSTOG00000006924) #26	GRIA1 (ENSSTOG00000008747) #27	ENSSTOG00000020908 #28	ENSSTOG00000000400 #29	GLRA1 (ENSSTOG00000015938) #30	G3BP1 (ENSSTOG00000015928) #31	ATOX1 (ENSSTOG00000029382) #32	SPARC (ENSSTOG00000007002) #33	ENSSTOG00000029374 #34	FAT2 (ENSSTOG00000019388) #35	SLC36A1 (ENSSTOG00000006917) #36	SLC36A2 (ENSSTOG00000006895) #37
Arctic ground squirrel	MODERN SPECIES	57	FNDC9 (ENSUPAG00010016907) #12	ITK (ENSUPAG00010016912) #13	GARIN3 (ENSUPAG00010016991)	MED7 (ENSUPAG00010017002) #14	HAVCR2 (ENSUPAG00010017006) ##14	ENSUPAG00010017019 #15	TIMD4 (ENSUPAG00010017040)	ENSUPAG00010017045	ENSUPAG00010017048	SGCD (ENSUPAG00010017054) #16	MRPL22 (ENSUPAG00010017071) #17	GEMIN5 (ENSUPAG00010017079) #18	CNOT8 (ENSUPAG00010017652) #19	FAXDC2 (ENSUPAG00010017661) #20	LARP1 (ENSUPAG00010017672) #21	HAND1 (ENSUPAG00010017683) #22	SAP30L (ENSUPAG00010017689) #23	ENSUPAG00010017692	GALNT10 (ENSUPAG00010017696) #24	MFAP3 (ENSUPAG00010017713) #25	FAM114A2 (ENSUPAG00010017716) #26	GRIA1 (ENSUPAG00010017762) #27	ENSUPAG00010017870 #28	ENSUPAG00010017877 #29	GLRA1 (ENSUPAG00010017888) #30	G3BP1 (ENSUPAG00010017917) #31	ENSUPAG00010017925 #32	SPARC (ENSUPAG00010017938) #33	ENSUPAG00010017975	FAT2 (ENSUPAG00010017980) #35	SLC36A1 (ENSUPAG00010018012) #36
Alpin marmot	MODERN SPECIES	31	FNDC9 (ENSMMMG00000013327) #12	ITK (ENSMMMG00000013337) #13	GARIN3 (ENSMMMG00000013418)	MED7 (ENSMMMG00000013429) #14	HAVCR2 (ENSMMMG00000013436) ##14	ENSMMMG00000013465 #15	ENSMMMG00000013477	ENSMMMG00000013485	ENSMMMG00000013491	SGCD (ENSMMMG00000013502) #16	MRPL22 (ENSMMMG00000013526) #17	GEMIN5 (ENSMMMG00000013554) #18	CNOT8 (ENSMMMG00000013723) #19	FAXDC2 (ENSMMMG00000013743) #20	LARP1 (ENSMMMG00000013777) #21	HAND1 (ENSMMMG00000013794) #22	SAP30L (ENSMMMG00000013804) #23	GALNT10 (ENSMMMG00000013815) #24	MFAP3 (ENSMMMG00000013826) #25	FAM114A2 (ENSMMMG00000013837) #26	GRIA1 (ENSMMMG00000013882) #27	ENSMMMG00000013957 #28	ENSMMMG00000013969 #29	GLRA1 (ENSMMMG00000013990) #30	ENSMMMG00000014015 #31	ATOX1 (ENSMMMG00000014027) #32	SPARC (ENSMMMG00000014038) #33	ENSMMMG00000014108 #34	FAT2 (ENSMMMG00000014141) #35	SLC36A1 (ENSMMMG00000014187) #36	SLC36A2 (ENSMMMG00000014208) #37
Eurasian red squirrel	MODERN SPECIES	15	ITK (ENSSVLG00005013116) #13	GARIN3 (ENSSVLG00005013187)	ENSSVLG00005013296 #14	HAVCR2 (ENSSVLG00005013460) ##14	ENSSVLG00005013680 #15	ENSSVLG00005013743	ENSSVLG00005013808	ENSSVLG00005013868	SGCD (ENSSVLG00005013974) #16	ENSSVLG00005014086	MRPL22 (ENSSVLG00005014120) #17	GEMIN5 (ENSSVLG00005014245) #18	ENSSVLG00005014312 #19	FAXDC2 (ENSSVLG00005014397) #20	LARP1 (ENSSVLG00005014609) #21	HAND1 (ENSSVLG00005014827) #22	SAP30L (ENSSVLG00005014870) #23	GALNT10 (ENSSVLG00005014997) #24	MFAP3 (ENSSVLG00005015093) #25	FAM114A2 (ENSSVLG00005015140) #26	GRIA1 (ENSSVLG00005015406) #27	ENSSVLG00005016055 #28	ENSSVLG00005016196 #29	GLRA1 (ENSSVLG00005016273) #30	G3BP1 (ENSSVLG00005016419) #31	ATOX1 (ENSSVLG00005016532) #32	ENSSVLG00005016582	SPARC (ENSSVLG00005016618) #33	FAT2 (ENSSVLG00005016721) #35	SLC36A1 (ENSSVLG00005016940) #36	SLC36A2 (ENSSVLG00005017051) #37
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00940000159087 #10	ENSGT00390000013517 #12	ENSGT00500000044831.a.a.b #11	ENSGT00940000158850 #13	ENSGT00940000162063	ENSGT00940000154444.B #14	ENSGT00940000154444.A ##14	ENSGT00940000161609	ENSGT00940000158509 #16	ENSGT00390000002110 #17	ENSGT00620000088064 #18	ENSGT00390000000080.a.b #19	ENSGT00940000157328.C #20	ENSGT00950000183345	ENSGT00940000159577.l #21	ENSGT00940000161111 #22	ENSGT00390000006633.a #23	ENSGT00940000156690 #24	ENSGT00390000011576.b #25	ENSGT00390000010054.a #26	ENSGT00940000157342 #27	ENSGT01100000263484.A.d #29	ENSGT00940000159047 #30	ENSGT00390000011365.a #31	ENSGT00940000162517 #32	ENSGT00510000046787.e.b #33	ENSGT00940000158507 #35	ENSGT00940000156583 #36	ENSGT00950000182924.B.a.b	ENSGT00940000160154	ENSGT00940000158570
Hystricomorpha_a	ANCESTRAL SPECIES	28	ENSGT00940000159624	ENSGT00940000159087 #10	ENSGT00390000013517 #12	ENSGT00500000044831.a.a.b #11	ENSGT00940000158850 #13	ENSGT00940000162063	ENSGT00940000154444.B #14	ENSGT00940000154444.A ##14	ENSGT00940000161609	ENSGT00940000158509 #16	ENSGT00390000002110 #17	ENSGT00620000088064 #18	ENSGT00390000000080.a.b #19	ENSGT00940000157328.C #20	ENSGT00940000159577.l #21	ENSGT00940000161111 #22	ENSGT00390000006633.a #23	ENSGT00940000156690 #24	ENSGT00390000011576.b #25	ENSGT00390000010054.a #26	ENSGT00940000157342 #27	ENSGT01100000263484.A.d #29	ENSGT00940000159047 #30	ENSGT00390000011365.a #31	ENSGT00940000162517 #32	ENSGT00510000046787.e.b #33	ENSGT00940000158507 #35	ENSGT00940000156583 #36	ENSGT00950000182924.B.a.b	ENSGT00940000160154	ENSGT00940000158570
Guinea pig	MODERN SPECIES	17	NIPAL4 (ENSCPOG00000007712) #10	FNDC9 (ENSCPOG00000023471) #12	CYFIP2 (ENSCPOG00000008377) #11	ITK (ENSCPOG00000010299) #13	GARIN3 (ENSCPOG00000030262)	MED7 (ENSCPOG00000031038) #14	ENSCPOG00000040495 ##14	ENSCPOG00000036932 ##14	ENSCPOG00000005891	SGCD (ENSCPOG00000003738) #16	MRPL22 (ENSCPOG00000006767) #17	GEMIN5 (ENSCPOG00000003468) #18	CNOT8 (ENSCPOG00000003466) #19	FAXDC2 (ENSCPOG00000003380) #20	LARP1 (ENSCPOG00000003377) #21	HAND1 (ENSCPOG00000024064) #22	SAP30L (ENSCPOG00000034034) #23	GALNT10 (ENSCPOG00000005026) #24	MFAP3 (ENSCPOG00000007940) #25	FAM114A2 (ENSCPOG00000035626) #26	GRIA1 (ENSCPOG00000003811) #27
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00940000159624	ENSGT00940000159087 #10	ENSGT00390000013517 #12	ENSGT00500000044831.a.a.b #11	ENSGT00940000158850 #13	ENSGT00940000162063	ENSGT00940000154444.B #14	ENSGT00940000154444.A ##14	ENSGT00940000161609	ENSGT00940000158509 #16	ENSGT00390000002110 #17	ENSGT00620000088064 #18	ENSGT00390000000080.a.b #19	ENSGT00940000157328.C #20	ENSGT00940000159577.l #21	ENSGT00940000161111 #22	ENSGT00390000006633.a #23	ENSGT00940000156690 #24	ENSGT00390000011576.b #25	ENSGT00390000010054.a #26	ENSGT00940000157342 #27	ENSGT01100000263484.A.d #29	ENSGT00940000159047 #30	ENSGT00390000011365.a.dc #31	ENSGT00940000162517 #32	ENSGT00510000046787.e.b #33	ENSGT00940000158507 #35	ENSGT00940000156583 #36	ENSGT00950000182924.B.a.b	ENSGT00940000160154	ENSGT00940000158570
Long-tailed chinchilla	MODERN SPECIES	115	SOX30 (ENSCLAG00000011694) #7	ADAM19 (ENSCLAG00000012647)	NIPAL4 (ENSCLAG00000014701) #10	FNDC9 (ENSCLAG00000014381) #12	CYFIP2 (ENSCLAG00000011702) #11	ITK (ENSCLAG00000012785) #13	GARIN3 (ENSCLAG00000014348)	MED7 (ENSCLAG00000016147) #14	HAVCR2 (ENSCLAG00000016115) ##14	SGCD (ENSCLAG00000014749) #16	MRPL22 (ENSCLAG00000011777) #17	GEMIN5 (ENSCLAG00000011942) #18	CNOT8 (ENSCLAG00000012116) #19	FAXDC2 (ENSCLAG00000011632) #20	LARP1 (ENSCLAG00000012755) #21	HAND1 (ENSCLAG00000011515) #22	SAP30L (ENSCLAG00000011128) #23	GALNT10 (ENSCLAG00000013273) #24	MFAP3 (ENSCLAG00000014677) #25	FAM114A2 (ENSCLAG00000013645) #26	GRIA1 (ENSCLAG00000017069) #27	GLRA1 (ENSCLAG00000015181) #30	G3BP1 (ENSCLAG00000012636) #31	ATOX1 (ENSCLAG00000011704) #32	SPARC (ENSCLAG00000012628) #33	FAT2 (ENSCLAG00000015326) #35	SLC36A1 (ENSCLAG00000013787) #36	ENSCLAG00000017958	SEC24A (ENSCLAG00000013518)	ENSCLAG00000015791	JADE2 (ENSCLAG00000014619)
Degu	MODERN SPECIES	70	ENSODEG00000009352	FNDC9 (ENSODEG00000019664) #12	CYFIP2 (ENSODEG00000009223) #11	ITK (ENSODEG00000012007) #13	GARIN3 (ENSODEG00000014426)	ENSODEG00000020034 #14	HAVCR2 (ENSODEG00000011256) ##14	ENSODEG00000013454	SGCD (ENSODEG00000011784) #16	ENSODEG00000010239	ENSODEG00000009212	GEMIN5 (ENSODEG00000009311) #18	ENSODEG00000009965 #19	FAXDC2 (ENSODEG00000009137) #20	LARP1 (ENSODEG00000010824) #21	HAND1 (ENSODEG00000009445) #22	SAP30L (ENSODEG00000008855) #23	GALNT10 (ENSODEG00000008896) #24	MFAP3 (ENSODEG00000009031) #25	ENSODEG00000009084 #26	GRIA1 (ENSODEG00000009490) #27	NMUR2 (ENSODEG00000009849) #29	GLRA1 (ENSODEG00000009543) #30	ENSODEG00000008869 #31	ENSODEG00000019553	ENSODEG00000009104 #32	SPARC (ENSODEG00000009746) #33	FAT2 (ENSODEG00000010366) #35	SLC36A1 (ENSODEG00000010341) #36	ENSODEG00000019626	SEC24A (ENSODEG00000008665)
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000021195	ENSHGLG00000014147 #14	ENSHGLG00000046979	ENSHGLG00000017927	ENSHGLG00000042356	ENSHGLG00000041626	SGCD (ENSHGLG00000014518) #16	ENSHGLG00000043124	MRPL22 (ENSHGLG00000018496) #17	GEMIN5 (ENSHGLG00000013629) #18	CNOT8 (ENSHGLG00000039848) #19	ENSHGLG00000044881	ENSHGLG00000047467 #20	ENSHGLG00000050510	LARP1 (ENSHGLG00000006267) #21	HAND1 (ENSHGLG00000008657) #22	SAP30L (ENSHGLG00000040967) #23	GALNT10 (ENSHGLG00000011151) #24	MFAP3 (ENSHGLG00000012228) #25	FAM114A2 (ENSHGLG00000005817) #26	GRIA1 (ENSHGLG00000008564) #27	ENSHGLG00000049292	ENSHGLG00000040393	NMUR2 (ENSHGLG00000016664) #29	ENSHGLG00000046430	GLRA1 (ENSHGLG00000016730) #30	G3BP1 (ENSHGLG00000014921) #31	ENSHGLG00000033423	ATOX1 (ENSHGLG00000015116) #32	SPARC (ENSHGLG00000016693) #33	ENSHGLG00000015818 #35