Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Glires ANCESTRAL SPECIES 4 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Rodentia ANCESTRAL SPECIES 5 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT01100000267007 #16 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Rodentia_A ANCESTRAL SPECIES 4 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT01100000267007 #16 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Hystricomorpha ANCESTRAL SPECIES 13 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT01100000267007 #16 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Naked mole-rat female MODERN SPECIES 24 P3H3 (ENSHGLG00000004948) #7 GPR162 (ENSHGLG00000004580) #8 CD4 (ENSHGLG00000004194) #9 LAG3 (ENSHGLG00000004095) #10 PTMS (ENSHGLG00000038669) #11 MLF2 (ENSHGLG00000003883) #12 COPS7A (ENSHGLG00000032684) #13 PIANP (ENSHGLG00000003689) #14 ZNF384 (ENSHGLG00000003572) #15 ENSHGLG00000039857 #16 Ing4 (ENSHGLG00000003447) #17 ACRBP (ENSHGLG00000003358) #18 ENSHGLG00000047116 #19 LPAR5 (ENSHGLG00000033434) #20 CHD4 (ENSHGLG00000003093) #21 NOP2 (ENSHGLG00000042932) #22 IFFO1 (ENSHGLG00000002934) #23 GAPDH (ENSHGLG00000002856) #24 ENSHGLG00000036344 #25 NCAPD2 (ENSHGLG00000001934) #26 MRPL51 (ENSHGLG00000050005) #27 ENSHGLG00000001867 #28 TAPBPL (ENSHGLG00000001831) #29 CD27 (ENSHGLG00000046681) #30 LTBR (ENSHGLG00000032405) #31 SCNN1A (ENSHGLG00000001735) #32 TNFRSF1A (ENSHGLG00000001689) #33 PLEKHG6 (ENSHGLG00000001657) #34 CD9 (ENSHGLG00000001625) #35 VWF (ENSHGLG00000001451) #36 ENSHGLG00000032394 #37 Hystricomorpha_a ANCESTRAL SPECIES 6 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Hystricomorpha_b ANCESTRAL SPECIES 2 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Long-tailed chinchilla MODERN SPECIES 120 CDCA3 (ENSCLAG00000013619) GNB3 (ENSCLAG00000014669) P3H3 (ENSCLAG00000012569) #7 GPR162 (ENSCLAG00000015020) #8 CD4 (ENSCLAG00000016197) #9 LAG3 (ENSCLAG00000014680) #10 PTMS (ENSCLAG00000016337) #11 MLF2 (ENSCLAG00000013739) #12 COPS7A (ENSCLAG00000014244) #13 PIANP (ENSCLAG00000016394) #14 ZNF384 (ENSCLAG00000015550) #15 ING4 (ENSCLAG00000014519) #17 ENSCLAG00000014500 #18 LPAR5 (ENSCLAG00000014166) #20 CHD4 (ENSCLAG00000012244) #21 NOP2 (ENSCLAG00000014440) #22 IFFO1 (ENSCLAG00000014944) #23 GAPDH (ENSCLAG00000013783) #24 NCAPD2 (ENSCLAG00000013118) #26 MRPL51 (ENSCLAG00000011881) #27 VAMP1 (ENSCLAG00000012860) #28 TAPBPL (ENSCLAG00000016184) #29 CD27 (ENSCLAG00000016154) #30 LTBR (ENSCLAG00000013106) #31 SCNN1A (ENSCLAG00000015244) #32 TNFRSF1A (ENSCLAG00000016084) #33 PLEKHG6 (ENSCLAG00000015229) #34 CD9 (ENSCLAG00000013477) #35 VWF (ENSCLAG00000014671) #36 ANO2 (ENSCLAG00000015450) NTF3 (ENSCLAG00000016065) Guinea pig MODERN SPECIES 107 USP5 (ENSCPOG00000012336) CDCA3 (ENSCPOG00000012334) GNB3 (ENSCPOG00000025068) P3H3 (ENSCPOG00000012330) #7 GPR162 (ENSCPOG00000038691) #8 ENSCPOG00000012324 #9 LAG3 (ENSCPOG00000012321) #10 PTMS (ENSCPOG00000021676) #11 MLF2 (ENSCPOG00000035372) #12 COPS7A (ENSCPOG00000000315) #13 PIANP (ENSCPOG00000000349) #14 ZNF384 (ENSCPOG00000012313) #15 ING4 (ENSCPOG00000012311) #17 ACRBP (ENSCPOG00000012300) #18 CHD4 (ENSCPOG00000008504) #21 NOP2 (ENSCPOG00000020690) #22 IFFO1 (ENSCPOG00000001041) #23 Gapdh (ENSCPOG00000026350) #24 NCAPD2 (ENSCPOG00000008480) #26 MRPL51 (ENSCPOG00000008478) #27 VAMP1 (ENSCPOG00000008473) #28 TAPBPL (ENSCPOG00000008460) #29 CD27 (ENSCPOG00000008449) #30 LTBR (ENSCPOG00000035613) #31 SCNN1A (ENSCPOG00000006185) #32 TNFRSF1A (ENSCPOG00000031352) #33 PLEKHG6 (ENSCPOG00000000576) #34 TEX52 (ENSCPOG00000008276) FOXM1 (ENSCPOG00000015373) RHNO1 (ENSCPOG00000035546) TULP3 (ENSCPOG00000004928) Sciuridae ANCESTRAL SPECIES 15 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Marmotini ANCESTRAL SPECIES 43 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b.k #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Marmotini_b ANCESTRAL SPECIES 111 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b.k #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Arctic ground squirrel MODERN SPECIES 287 GNB3 (ENSUPAG00010012262) P3H3 (ENSUPAG00010012273) #7 GPR162 (ENSUPAG00010012307) #8 CD4 (ENSUPAG00010012311) #9 LAG3 (ENSUPAG00010012322) #10 ENSUPAG00010012331 #11 MLF2 (ENSUPAG00010012341) #12 ENSUPAG00010012348 COPS7A (ENSUPAG00010012353) #13 PIANP (ENSUPAG00010012361) #14 ZNF384 (ENSUPAG00010012380) #15 ING4 (ENSUPAG00010012637) #17 ACRBP (ENSUPAG00010012647) #18 LPAR5 (ENSUPAG00010012680) #20 CHD4 (ENSUPAG00010012693) #21 NOP2 (ENSUPAG00010012834) #22 IFFO1 (ENSUPAG00010012871) #23 ENSUPAG00010012916 ##24 NCAPD2 (ENSUPAG00010012965) #26 MRPL51 (ENSUPAG00010013007) #27 VAMP1 (ENSUPAG00010013015) #28 TAPBPL (ENSUPAG00010013043) #29 CD27 (ENSUPAG00010013052) #30 LTBR (ENSUPAG00010013063) #31 SCNN1A (ENSUPAG00010013073) #32 TNFRSF1A (ENSUPAG00010013146) #33 PLEKHG6 (ENSUPAG00010013161) #34 CD9 (ENSUPAG00010013184) #35 VWF (ENSUPAG00010013201) #36 ANO2 (ENSUPAG00010013264) NTF3 (ENSUPAG00010013302) Alpin marmot MODERN SPECIES 69 CDCA3 (ENSMMMG00000016946) GNB3 (ENSMMMG00000016949) P3H3 (ENSMMMG00000016960) #7 GPR162 (ENSMMMG00000016980) #8 CD4 (ENSMMMG00000016990) #9 LAG3 (ENSMMMG00000017001) #10 ENSMMMG00000017097 #11 MLF2 (ENSMMMG00000017103) #12 COPS7A (ENSMMMG00000017113) #13 PIANP (ENSMMMG00000017119) #14 ZNF384 (ENSMMMG00000017132) #15 ING4 (ENSMMMG00000017397) #17 ACRBP (ENSMMMG00000017414) #18 LPAR5 (ENSMMMG00000017458) #20 CHD4 (ENSMMMG00000017466) #21 NOP2 (ENSMMMG00000017537) #22 IFFO1 (ENSMMMG00000017549) #23 ENSMMMG00000017572 #24 NCAPD2 (ENSMMMG00000017813) #26 MRPL51 (ENSMMMG00000017860) #27 VAMP1 (ENSMMMG00000017864) #28 TAPBPL (ENSMMMG00000017876) #29 CD27 (ENSMMMG00000017884) #30 LTBR (ENSMMMG00000017889) #31 SCNN1A (ENSMMMG00000017899) #32 TNFRSF1A (ENSMMMG00000017946) #33 PLEKHG6 (ENSMMMG00000017961) #34 CD9 (ENSMMMG00000017985) #35 VWF (ENSMMMG00000017987) #36 ANO2 (ENSMMMG00000018106) NTF3 (ENSMMMG00000018129) Eurasian red squirrel MODERN SPECIES 14 ENSSVLG00005019585 GNB3 (ENSSVLG00005019432) P3H3 (ENSSVLG00005019312) #7 GPR162 (ENSSVLG00005019129) #8 CD4 (ENSSVLG00005018976) #9 LAG3 (ENSSVLG00005018831) #10 ENSSVLG00005018711 MLF2 (ENSSVLG00005018671) #12 ENSSVLG00005018640 #13 PIANP (ENSSVLG00005018592) #14 ENSSVLG00005018564 #15 ING4 (ENSSVLG00005018357) #17 ACRBP (ENSSVLG00005018087) #18 LPAR5 (ENSSVLG00005018041) #20 CHD4 (ENSSVLG00005015376) #21 NOP2 (ENSSVLG00005014954) #22 ENSSVLG00005014899 #23 ENSSVLG00005014703 #24 ENSSVLG00005014610 MRPL51 (ENSSVLG00005014541) #27 VAMP1 (ENSSVLG00005014405) #28 TAPBPL (ENSSVLG00005014372) #29 CD27 (ENSSVLG00005014318) #30 LTBR (ENSSVLG00005014074) #31 ENSSVLG00005013962 SCNN1A (ENSSVLG00005013781) #32 TNFRSF1A (ENSSVLG00005013664) #33 PLEKHG6 (ENSSVLG00005013449) #34 CD9 (ENSSVLG00005013052) #35 VWF (ENSSVLG00005012648) #36 ANO2 (ENSSVLG00005011671) Rodentia_B ANCESTRAL SPECIES 35 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT01100000267007 #16 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Myomorpha ANCESTRAL SPECIES 15 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT01100000267007 #16 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Muroidea ANCESTRAL SPECIES 24 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT01100000267007 #16 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Muroidea_A ANCESTRAL SPECIES 4 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT01100000267007 #16 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.b.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Cricetidae ANCESTRAL SPECIES 3 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Cricetinae ANCESTRAL SPECIES 8 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00950000182825.B ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Chinese hamster chok1gshd MODERN SPECIES 289 Cdca3 (ENSCGRG00001013882) Gnb3 (ENSCGRG00001016439) P3h3 (ENSCGRG00001000528) #7 Gpr162 (ENSCGRG00001003162) #8 Cd4 (ENSCGRG00001013261) #9 Lag3 (ENSCGRG00001022458) #10 Ptms (ENSCGRG00001001584) Mlf2 (ENSCGRG00001010430) #12 Cops7a (ENSCGRG00001014256) #13 Pianp (ENSCGRG00001015100) #14 Zfp384 (ENSCGRG00001013065) #15 Ing4 (ENSCGRG00001016033) #17 Acrbp (ENSCGRG00001017982) #18 Lpar5 (ENSCGRG00001014775) #20 Chd4 (ENSCGRG00001020662) #21 Nop2 (ENSCGRG00001020970) #22 Iffo1 (ENSCGRG00001000162) #23 ENSCGRG00001006857 ##24 Ncapd2 (ENSCGRG00001002247) #26 ENSCGRG00001010566 #27 Vamp1 (ENSCGRG00001014055) #28 ENSCGRG00001020124 #29 Cd27 (ENSCGRG00001009970) #30 ENSCGRG00001013937 Ltbr (ENSCGRG00001015407) #31 Scnn1a (ENSCGRG00001020304) #32 Tnfrsf1a (ENSCGRG00001021062) #33 Plekhg6 (ENSCGRG00001021507) #34 ENSCGRG00001015575 Cd9 (ENSCGRG00001022703) #35 Vwf (ENSCGRG00001000364) #36 Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00910000146741 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Prairie vole MODERN SPECIES 84 Cdca3 (ENSMOCG00000008232) Gnb3 (ENSMOCG00000019447) P3h3 (ENSMOCG00000014085) #7 Gpr162 (ENSMOCG00000018395) #8 Cd4 (ENSMOCG00000007576) #9 Lag3 (ENSMOCG00000016856) #10 Ptms (ENSMOCG00000011411) ENSMOCG00000000196 #12 Cops7a (ENSMOCG00000018184) #13 Pianp (ENSMOCG00000012046) #14 Zfp384 (ENSMOCG00000022768) #15 Ing4 (ENSMOCG00000010335) #17 Acrbp (ENSMOCG00000017657) #18 Lpar5 (ENSMOCG00000021762) #20 Chd4 (ENSMOCG00000020624) #21 Nop2 (ENSMOCG00000017237) #22 Iffo1 (ENSMOCG00000003850) #23 ENSMOCG00000000471 ##24 ENSMOCG00000000297 #26 Mrpl51 (ENSMOCG00000013685) #27 Vamp1 (ENSMOCG00000019201) #28 Tapbpl (ENSMOCG00000000244) #29 Cd27 (ENSMOCG00000017717) #30 Ltbr (ENSMOCG00000015975) #31 Scnn1a (ENSMOCG00000000794) #32 Tnfrsf1a (ENSMOCG00000013868) #33 Plekhg6 (ENSMOCG00000006971) #34 Cd9 (ENSMOCG00000022019) #35 Vwf (ENSMOCG00000005320) #36 Ano2 (ENSMOCG00000000380) Ntf3 (ENSMOCG00000001488) Northern American deer mouse MODERN SPECIES 16 Cdca3 (ENSPEMG00000016358) Gnb3 (ENSPEMG00000016368) P3h3 (ENSPEMG00000011450) #7 Gpr162 (ENSPEMG00000017095) #8 ENSPEMG00000024347 #9 Lag3 (ENSPEMG00000018743) #10 ENSPEMG00000016593 Mlf2 (ENSPEMG00000013094) #12 Cops7a (ENSPEMG00000002860) #13 Pianp (ENSPEMG00000013120) #14 Zfp384 (ENSPEMG00000016282) #15 Ing4 (ENSPEMG00000018496) #17 Acrbp (ENSPEMG00000010165) #18 Lpar5 (ENSPEMG00000019056) #20 Chd4 (ENSPEMG00000010290) #21 Nop2 (ENSPEMG00000013138) #22 Iffo1 (ENSPEMG00000008539) #23 ENSPEMG00000001195 ##24 Ncapd2 (ENSPEMG00000016112) #26 Mrpl51 (ENSPEMG00000008667) #27 Vamp1 (ENSPEMG00000006934) #28 Tapbpl (ENSPEMG00000003668) #29 ENSPEMG00000028083 Cd27 (ENSPEMG00000012177) #30 ENSPEMG00000025965 Ltbr (ENSPEMG00000014957) #31 Scnn1a (ENSPEMG00000012010) #32 Tnfrsf1a (ENSPEMG00000009612) #33 Plekhg6 (ENSPEMG00000013888) #34 Cd9 (ENSPEMG00000008270) #35 Vwf (ENSPEMG00000010217) #36 Murinae ANCESTRAL SPECIES 4 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT01100000267007 #16 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.b.a.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Mus ANCESTRAL SPECIES 12 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.b.a.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Mus_A ANCESTRAL SPECIES 7 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.b.a.a.a ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Mus_B ANCESTRAL SPECIES 15 ENSGT00390000017343.g ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904.e.a #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.b.a.a.a.b.a.b ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00950000182825.B ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Mouse MODERN SPECIES 15 Cdca3 (ENSMUSG00000023505) Gnb3 (ENSMUSG00000023439) P3h3 (ENSMUSG00000023191) #7 Gpr162 (ENSMUSG00000038390) #8 Cd4 (ENSMUSG00000023274) #9 Lag3 (ENSMUSG00000030124) #10 Ptms (ENSMUSG00000030122) Mlf2 (ENSMUSG00000030120) #12 Cops7a (ENSMUSG00000030127) #13 Pianp (ENSMUSG00000030329) #14 Zfp384 (ENSMUSG00000038346) #15 Ing4 (ENSMUSG00000030330) #17 Acrbp (ENSMUSG00000072770) #18 Lpar5 (ENSMUSG00000067714) #20 Chd4 (ENSMUSG00000063870) #21 Nop2 (ENSMUSG00000038279) #22 Iffo1 (ENSMUSG00000038271) #23 Gapdh (ENSMUSG00000057666) ##24 Ncapd2 (ENSMUSG00000038252) #26 Mrpl51 (ENSMUSG00000030335) #27 Vamp1 (ENSMUSG00000030337) #28 Tapbpl (ENSMUSG00000038213) #29 Cd27 (ENSMUSG00000030336) #30 Tuba3a (ENSMUSG00000067702) Ltbr (ENSMUSG00000030339) #31 Scnn1a (ENSMUSG00000030340) #32 Tnfrsf1a (ENSMUSG00000030341) #33 Plekhg6 (ENSMUSG00000038167) #34 Cd9 (ENSMUSG00000030342) #35 Vwf (ENSMUSG00000001930) #36 Ano2 (ENSMUSG00000038115) Mus_C ANCESTRAL SPECIES 18 ENSGT00390000017343.g ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01100000264105 ENSGT00940000168330 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904.e.a #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.m.b.a.a.b.a.a.a.b.a.b ##24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00950000182825.B ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C Steppe mouse MODERN SPECIES 2453 Cops7a (ENSMSIG00000005376) #13 Pianp (ENSMSIG00000005454) #14 Zfp384 (ENSMSIG00000005490) #15 Ing4 (ENSMSIG00000005976) #17 Acrbp (ENSMSIG00000006066) #18 Lpar5 (ENSMSIG00000006314) #20 Chd4 (ENSMSIG00000006341) #21 Nop2 (ENSMSIG00000006620) #22 Iffo1 (ENSMSIG00000006668) #23 ENSMSIG00000006759 ##24 Ncapd2 (ENSMSIG00000006811) #26 Mrpl51 (ENSMSIG00000006876) #27 Vamp1 (ENSMSIG00000006906) #28 Tapbpl (ENSMSIG00000006978) #29 Cd27 (ENSMSIG00000007002) #30 ENSMSIG00000007122 Ltbr (ENSMSIG00000007137) #31 Scnn1a (ENSMSIG00000007175) #32 Tnfrsf1a (ENSMSIG00000007222) #33 Plekhg6 (ENSMSIG00000007258) #34 Rat MODERN SPECIES 14 P3h3 (ENSRNOG00000071218) #7 Gpr162 (ENSRNOG00000016143) #8 ENSRNOG00000071219 #9 Lag3 (ENSRNOG00000021334) #10 Ptms (ENSRNOG00000060098) AC115420.4 (ENSRNOG00000060308) Mlf2 (ENSRNOG00000016589) #12 Cops7a (ENSRNOG00000016778) #13 Pianp (ENSRNOG00000017052) #14 Zfp384 (ENSRNOG00000017066) #15 ENSRNOG00000066393 #16 Acrbp (ENSRNOG00000017399) #18 Ing4 (ENSRNOG00000023363) #17 Lpar5 (ENSRNOG00000021401) #20 Chd4 (ENSRNOG00000018309) #21 Nop2 (ENSRNOG00000018453) #22 Iffo1 (ENSRNOG00000018533) #23 LOC108351137 (ENSRNOG00000018630) ##24 Ncapd2 (ENSRNOG00000055300) #26 Mrpl51 (ENSRNOG00000019165) #27 Vamp1 (ENSRNOG00000019219) #28 Cd27 (ENSRNOG00000027466) #30 Tuba3b (ENSRNOG00000031707) Ltbr (ENSRNOG00000019264) #31 Scnn1a (ENSRNOG00000019368) #32 Tnfrsf1a (ENSRNOG00000031312) #33 Plekhg6 (ENSRNOG00000019528) #34 ENSRNOG00000064217 Cd9 (ENSRNOG00000019556) #35 Vwf (ENSRNOG00000019689) #36 Ano2 (ENSRNOG00000023561) Upper Galilee mountains blind mole rat MODERN SPECIES 1885 Usp5 (ENSNGAG00000011453) Cdca3 (ENSNGAG00000016633) Gnb3 (ENSNGAG00000023501) P3h3 (ENSNGAG00000015076) #7 Gpr162 (ENSNGAG00000002840) #8 ENSNGAG00000022963 #9 Lag3 (ENSNGAG00000009790) #10 ENSNGAG00000021065 #11 Mlf2 (ENSNGAG00000016666) #12 Cops7a (ENSNGAG00000022873) #13 Pianp (ENSNGAG00000013944) #14 Zfp384 (ENSNGAG00000011316) #15 Ing4 (ENSNGAG00000016704) #17 Acrbp (ENSNGAG00000022774) #18 Chd4 (ENSNGAG00000016920) #21 Nop2 (ENSNGAG00000019010) #22 Iffo1 (ENSNGAG00000013363) #23 ENSNGAG00000013476 #24 Ncapd2 (ENSNGAG00000021912) #26 Mrpl51 (ENSNGAG00000022754) #27 Vamp1 (ENSNGAG00000011610) #28 Tapbpl (ENSNGAG00000023020) #29 Cd27 (ENSNGAG00000019654) #30 Ltbr (ENSNGAG00000022402) #31 Scnn1a (ENSNGAG00000019351) #32 Tnfrsf1a (ENSNGAG00000019085) #33 Plekhg6 (ENSNGAG00000011808) #34 ENSNGAG00000022639 Cd9 (ENSNGAG00000014189) #35 Vwf (ENSNGAG00000022403) #36 Ano2 (ENSNGAG00000006568) Lagomorpha ANCESTRAL SPECIES 37 ENSGT00390000017343 ENSGT01000000214413.b.a.b.a ENSGT00940000159164 #7 ENSGT00390000017213.A #8 ENSGT00390000001745 #9 ENSGT01090000259985.b.b.b.a.a.a #10 ENSGT01030000234816 #11 ENSGT00390000005023.a #12 ENSGT00940000159873 #13 ENSGT00510000049460 #14 ENSGT00940000156904 #15 ENSGT00940000159033 #17 ENSGT00390000000826 #18 ENSGT00950000183136.b.b #20 ENSGT00940000155088 #21 ENSGT00940000161554 #22 ENSGT00510000046803.b.b #23 ENSGT00940000153298.n #24 ENSGT00940000153566.a #26 ENSGT00390000018821 #27 ENSGT00940000161390 #28 ENSGT00940000160453 #29 ENSGT00510000049297 #30 ENSGT00940000162178 #31 ENSGT00940000160952 #32 ENSGT00940000159540 #33 ENSGT00940000161250 #34 ENSGT00940000155083.b #35 ENSGT00940000155810 #36 ENSGT00940000155840.C ENSGT00390000007725.A.a Rabbit MODERN SPECIES 19 USP5 (ENSOCUG00000003582) CDCA3 (ENSOCUG00000022434) GNB3 (ENSOCUG00000012934) P3H3 (ENSOCUG00000012916) #7 GPR162 (ENSOCUG00000030705) #8 ENSOCUG00000012911 #9 LAG3 (ENSOCUG00000011196) #10 ENSOCUG00000003750 #12 COPS7A (ENSOCUG00000011187) #13 PIANP (ENSOCUG00000003749) #14 ZNF384 (ENSOCUG00000003747) #15 ING4 (ENSOCUG00000003742) #17 ACRBP (ENSOCUG00000003737) #18 LPAR5 (ENSOCUG00000026551) #20 CHD4 (ENSOCUG00000008215) #21 NOP2 (ENSOCUG00000008203) #22 ENSOCUG00000008198 #23 ENSOCUG00000029891 #24 NCAPD2 (ENSOCUG00000008176) #26 MRPL51 (ENSOCUG00000008170) #27 VAMP1 (ENSOCUG00000021107) #28 TAPBPL (ENSOCUG00000008163) #29 CD27 (ENSOCUG00000008159) #30 LTBR (ENSOCUG00000001292) #31 SCNN1A (ENSOCUG00000010152) #32 TNFRSF1A (ENSOCUG00000010146) #33 PLEKHG6 (ENSOCUG00000010130) #34 ENSOCUG00000010123 #35 VWF (ENSOCUG00000006783) #36 ENSOCUG00000006775 ENSOCUG00000039598 Pika MODERN SPECIES 233 LRRC23 (ENSOPRG00000003927) SPSB2 (ENSOPRG00000003916) TPI1 (ENSOPRG00000003895) USP5 (ENSOPRG00000003849) CDCA3 (ENSOPRG00000003837) GNB3 (ENSOPRG00000003814) P3H3 (ENSOPRG00000003768) #7 CD4 (ENSOPRG00000003747) #9 LAG3 (ENSOPRG00000003706) #10 PTMS (ENSOPRG00000003690) #11 MLF2 (ENSOPRG00000003657) #12 COPS7A (ENSOPRG00000003640) #13 ZNF384 (ENSOPRG00000003626) #15 ACRBP (ENSOPRG00000003592) #18 CHD4 (ENSOPRG00000003477) #21 NOP2 (ENSOPRG00000003412) #22 Tree shrew MODERN SPECIES 397 ACRBP (ENSTBEG00000011975) #18 LPAR5 (ENSTBEG00000011959) #20 CHD4 (ENSTBEG00000011379) #21 ENSTBEG00000010989 #22