Amniota	ANCESTRAL SPECIES	53	ENSGT00940000156036	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00940000180930	ENSGT00390000018821 #27	ENSGT00940000161390 #28
Mammalia	ANCESTRAL SPECIES	20	ENSGT00940000156036	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860
Theria	ANCESTRAL SPECIES		ENSGT00940000156036	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Eutheria	ANCESTRAL SPECIES	1	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Glires	ANCESTRAL SPECIES	4	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Rodentia	ANCESTRAL SPECIES	5	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT01100000267007 #16	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT01100000267007 #16	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT01100000267007 #16	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Naked mole-rat female	MODERN SPECIES	24	P3H3 (ENSHGLG00000004948) #7	GPR162 (ENSHGLG00000004580) #8	CD4 (ENSHGLG00000004194) #9	LAG3 (ENSHGLG00000004095) #10	PTMS (ENSHGLG00000038669) #11	MLF2 (ENSHGLG00000003883) #12	COPS7A (ENSHGLG00000032684) #13	PIANP (ENSHGLG00000003689) #14	ZNF384 (ENSHGLG00000003572) #15	ENSHGLG00000039857 #16	Ing4 (ENSHGLG00000003447) #17	ACRBP (ENSHGLG00000003358) #18	ENSHGLG00000047116 #19	LPAR5 (ENSHGLG00000033434) #20	CHD4 (ENSHGLG00000003093) #21	NOP2 (ENSHGLG00000042932) #22	IFFO1 (ENSHGLG00000002934) #23	GAPDH (ENSHGLG00000002856) #24	ENSHGLG00000036344 #25	NCAPD2 (ENSHGLG00000001934) #26	MRPL51 (ENSHGLG00000050005) #27	ENSHGLG00000001867 #28	TAPBPL (ENSHGLG00000001831) #29	CD27 (ENSHGLG00000046681) #30	LTBR (ENSHGLG00000032405) #31	SCNN1A (ENSHGLG00000001735) #32	TNFRSF1A (ENSHGLG00000001689) #33	PLEKHG6 (ENSHGLG00000001657) #34	CD9 (ENSHGLG00000001625) #35	VWF (ENSHGLG00000001451) #36	ENSHGLG00000032394 #37
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Long-tailed chinchilla	MODERN SPECIES	120	CDCA3 (ENSCLAG00000013619)	GNB3 (ENSCLAG00000014669)	P3H3 (ENSCLAG00000012569) #7	GPR162 (ENSCLAG00000015020) #8	CD4 (ENSCLAG00000016197) #9	LAG3 (ENSCLAG00000014680) #10	PTMS (ENSCLAG00000016337) #11	MLF2 (ENSCLAG00000013739) #12	COPS7A (ENSCLAG00000014244) #13	PIANP (ENSCLAG00000016394) #14	ZNF384 (ENSCLAG00000015550) #15	ING4 (ENSCLAG00000014519) #17	ENSCLAG00000014500 #18	LPAR5 (ENSCLAG00000014166) #20	CHD4 (ENSCLAG00000012244) #21	NOP2 (ENSCLAG00000014440) #22	IFFO1 (ENSCLAG00000014944) #23	GAPDH (ENSCLAG00000013783) #24	NCAPD2 (ENSCLAG00000013118) #26	MRPL51 (ENSCLAG00000011881) #27	VAMP1 (ENSCLAG00000012860) #28	TAPBPL (ENSCLAG00000016184) #29	CD27 (ENSCLAG00000016154) #30	LTBR (ENSCLAG00000013106) #31	SCNN1A (ENSCLAG00000015244) #32	TNFRSF1A (ENSCLAG00000016084) #33	PLEKHG6 (ENSCLAG00000015229) #34	CD9 (ENSCLAG00000013477) #35	VWF (ENSCLAG00000014671) #36	ANO2 (ENSCLAG00000015450)	NTF3 (ENSCLAG00000016065)
Guinea pig	MODERN SPECIES	107	USP5 (ENSCPOG00000012336)	CDCA3 (ENSCPOG00000012334)	GNB3 (ENSCPOG00000025068)	P3H3 (ENSCPOG00000012330) #7	GPR162 (ENSCPOG00000038691) #8	ENSCPOG00000012324 #9	LAG3 (ENSCPOG00000012321) #10	PTMS (ENSCPOG00000021676) #11	MLF2 (ENSCPOG00000035372) #12	COPS7A (ENSCPOG00000000315) #13	PIANP (ENSCPOG00000000349) #14	ZNF384 (ENSCPOG00000012313) #15	ING4 (ENSCPOG00000012311) #17	ACRBP (ENSCPOG00000012300) #18	CHD4 (ENSCPOG00000008504) #21	NOP2 (ENSCPOG00000020690) #22	IFFO1 (ENSCPOG00000001041) #23	Gapdh (ENSCPOG00000026350) #24	NCAPD2 (ENSCPOG00000008480) #26	MRPL51 (ENSCPOG00000008478) #27	VAMP1 (ENSCPOG00000008473) #28	TAPBPL (ENSCPOG00000008460) #29	CD27 (ENSCPOG00000008449) #30	LTBR (ENSCPOG00000035613) #31	SCNN1A (ENSCPOG00000006185) #32	TNFRSF1A (ENSCPOG00000031352) #33	PLEKHG6 (ENSCPOG00000000576) #34	TEX52 (ENSCPOG00000008276)	FOXM1 (ENSCPOG00000015373)	RHNO1 (ENSCPOG00000035546)	TULP3 (ENSCPOG00000004928)
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Marmotini	ANCESTRAL SPECIES	43	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b.k #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Marmotini_b	ANCESTRAL SPECIES	111	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b.k #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Arctic ground squirrel	MODERN SPECIES	287	GNB3 (ENSUPAG00010012262)	P3H3 (ENSUPAG00010012273) #7	GPR162 (ENSUPAG00010012307) #8	CD4 (ENSUPAG00010012311) #9	LAG3 (ENSUPAG00010012322) #10	ENSUPAG00010012331 #11	MLF2 (ENSUPAG00010012341) #12	ENSUPAG00010012348	COPS7A (ENSUPAG00010012353) #13	PIANP (ENSUPAG00010012361) #14	ZNF384 (ENSUPAG00010012380) #15	ING4 (ENSUPAG00010012637) #17	ACRBP (ENSUPAG00010012647) #18	LPAR5 (ENSUPAG00010012680) #20	CHD4 (ENSUPAG00010012693) #21	NOP2 (ENSUPAG00010012834) #22	IFFO1 (ENSUPAG00010012871) #23	ENSUPAG00010012916 ##24	NCAPD2 (ENSUPAG00010012965) #26	MRPL51 (ENSUPAG00010013007) #27	VAMP1 (ENSUPAG00010013015) #28	TAPBPL (ENSUPAG00010013043) #29	CD27 (ENSUPAG00010013052) #30	LTBR (ENSUPAG00010013063) #31	SCNN1A (ENSUPAG00010013073) #32	TNFRSF1A (ENSUPAG00010013146) #33	PLEKHG6 (ENSUPAG00010013161) #34	CD9 (ENSUPAG00010013184) #35	VWF (ENSUPAG00010013201) #36	ANO2 (ENSUPAG00010013264)	NTF3 (ENSUPAG00010013302)
Alpin marmot	MODERN SPECIES	69	CDCA3 (ENSMMMG00000016946)	GNB3 (ENSMMMG00000016949)	P3H3 (ENSMMMG00000016960) #7	GPR162 (ENSMMMG00000016980) #8	CD4 (ENSMMMG00000016990) #9	LAG3 (ENSMMMG00000017001) #10	ENSMMMG00000017097 #11	MLF2 (ENSMMMG00000017103) #12	COPS7A (ENSMMMG00000017113) #13	PIANP (ENSMMMG00000017119) #14	ZNF384 (ENSMMMG00000017132) #15	ING4 (ENSMMMG00000017397) #17	ACRBP (ENSMMMG00000017414) #18	LPAR5 (ENSMMMG00000017458) #20	CHD4 (ENSMMMG00000017466) #21	NOP2 (ENSMMMG00000017537) #22	IFFO1 (ENSMMMG00000017549) #23	ENSMMMG00000017572 #24	NCAPD2 (ENSMMMG00000017813) #26	MRPL51 (ENSMMMG00000017860) #27	VAMP1 (ENSMMMG00000017864) #28	TAPBPL (ENSMMMG00000017876) #29	CD27 (ENSMMMG00000017884) #30	LTBR (ENSMMMG00000017889) #31	SCNN1A (ENSMMMG00000017899) #32	TNFRSF1A (ENSMMMG00000017946) #33	PLEKHG6 (ENSMMMG00000017961) #34	CD9 (ENSMMMG00000017985) #35	VWF (ENSMMMG00000017987) #36	ANO2 (ENSMMMG00000018106)	NTF3 (ENSMMMG00000018129)
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005019585	GNB3 (ENSSVLG00005019432)	P3H3 (ENSSVLG00005019312) #7	GPR162 (ENSSVLG00005019129) #8	CD4 (ENSSVLG00005018976) #9	LAG3 (ENSSVLG00005018831) #10	ENSSVLG00005018711	MLF2 (ENSSVLG00005018671) #12	ENSSVLG00005018640 #13	PIANP (ENSSVLG00005018592) #14	ENSSVLG00005018564 #15	ING4 (ENSSVLG00005018357) #17	ACRBP (ENSSVLG00005018087) #18	LPAR5 (ENSSVLG00005018041) #20	CHD4 (ENSSVLG00005015376) #21	NOP2 (ENSSVLG00005014954) #22	ENSSVLG00005014899 #23	ENSSVLG00005014703 #24	ENSSVLG00005014610	MRPL51 (ENSSVLG00005014541) #27	VAMP1 (ENSSVLG00005014405) #28	TAPBPL (ENSSVLG00005014372) #29	CD27 (ENSSVLG00005014318) #30	LTBR (ENSSVLG00005014074) #31	ENSSVLG00005013962	SCNN1A (ENSSVLG00005013781) #32	TNFRSF1A (ENSSVLG00005013664) #33	PLEKHG6 (ENSSVLG00005013449) #34	CD9 (ENSSVLG00005013052) #35	VWF (ENSSVLG00005012648) #36	ANO2 (ENSSVLG00005011671)
Rodentia_B	ANCESTRAL SPECIES	35	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT01100000267007 #16	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Myomorpha	ANCESTRAL SPECIES	15	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT01100000267007 #16	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Muroidea	ANCESTRAL SPECIES	24	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT01100000267007 #16	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT01100000267007 #16	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00950000182825.B	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Chinese hamster chok1gshd	MODERN SPECIES	289	Cdca3 (ENSCGRG00001013882)	Gnb3 (ENSCGRG00001016439)	P3h3 (ENSCGRG00001000528) #7	Gpr162 (ENSCGRG00001003162) #8	Cd4 (ENSCGRG00001013261) #9	Lag3 (ENSCGRG00001022458) #10	Ptms (ENSCGRG00001001584)	Mlf2 (ENSCGRG00001010430) #12	Cops7a (ENSCGRG00001014256) #13	Pianp (ENSCGRG00001015100) #14	Zfp384 (ENSCGRG00001013065) #15	Ing4 (ENSCGRG00001016033) #17	Acrbp (ENSCGRG00001017982) #18	Lpar5 (ENSCGRG00001014775) #20	Chd4 (ENSCGRG00001020662) #21	Nop2 (ENSCGRG00001020970) #22	Iffo1 (ENSCGRG00001000162) #23	ENSCGRG00001006857 ##24	Ncapd2 (ENSCGRG00001002247) #26	ENSCGRG00001010566 #27	Vamp1 (ENSCGRG00001014055) #28	ENSCGRG00001020124 #29	Cd27 (ENSCGRG00001009970) #30	ENSCGRG00001013937	Ltbr (ENSCGRG00001015407) #31	Scnn1a (ENSCGRG00001020304) #32	Tnfrsf1a (ENSCGRG00001021062) #33	Plekhg6 (ENSCGRG00001021507) #34	ENSCGRG00001015575	Cd9 (ENSCGRG00001022703) #35	Vwf (ENSCGRG00001000364) #36
Cricetidae_B	ANCESTRAL SPECIES	14	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Prairie vole	MODERN SPECIES	84	Cdca3 (ENSMOCG00000008232)	Gnb3 (ENSMOCG00000019447)	P3h3 (ENSMOCG00000014085) #7	Gpr162 (ENSMOCG00000018395) #8	Cd4 (ENSMOCG00000007576) #9	Lag3 (ENSMOCG00000016856) #10	Ptms (ENSMOCG00000011411)	ENSMOCG00000000196 #12	Cops7a (ENSMOCG00000018184) #13	Pianp (ENSMOCG00000012046) #14	Zfp384 (ENSMOCG00000022768) #15	Ing4 (ENSMOCG00000010335) #17	Acrbp (ENSMOCG00000017657) #18	Lpar5 (ENSMOCG00000021762) #20	Chd4 (ENSMOCG00000020624) #21	Nop2 (ENSMOCG00000017237) #22	Iffo1 (ENSMOCG00000003850) #23	ENSMOCG00000000471 ##24	ENSMOCG00000000297 #26	Mrpl51 (ENSMOCG00000013685) #27	Vamp1 (ENSMOCG00000019201) #28	Tapbpl (ENSMOCG00000000244) #29	Cd27 (ENSMOCG00000017717) #30	Ltbr (ENSMOCG00000015975) #31	Scnn1a (ENSMOCG00000000794) #32	Tnfrsf1a (ENSMOCG00000013868) #33	Plekhg6 (ENSMOCG00000006971) #34	Cd9 (ENSMOCG00000022019) #35	Vwf (ENSMOCG00000005320) #36	Ano2 (ENSMOCG00000000380)	Ntf3 (ENSMOCG00000001488)
Northern American deer mouse	MODERN SPECIES	16	Cdca3 (ENSPEMG00000016358)	Gnb3 (ENSPEMG00000016368)	P3h3 (ENSPEMG00000011450) #7	Gpr162 (ENSPEMG00000017095) #8	ENSPEMG00000024347 #9	Lag3 (ENSPEMG00000018743) #10	ENSPEMG00000016593	Mlf2 (ENSPEMG00000013094) #12	Cops7a (ENSPEMG00000002860) #13	Pianp (ENSPEMG00000013120) #14	Zfp384 (ENSPEMG00000016282) #15	Ing4 (ENSPEMG00000018496) #17	Acrbp (ENSPEMG00000010165) #18	Lpar5 (ENSPEMG00000019056) #20	Chd4 (ENSPEMG00000010290) #21	Nop2 (ENSPEMG00000013138) #22	Iffo1 (ENSPEMG00000008539) #23	ENSPEMG00000001195 ##24	Ncapd2 (ENSPEMG00000016112) #26	Mrpl51 (ENSPEMG00000008667) #27	Vamp1 (ENSPEMG00000006934) #28	Tapbpl (ENSPEMG00000003668) #29	ENSPEMG00000028083	Cd27 (ENSPEMG00000012177) #30	ENSPEMG00000025965	Ltbr (ENSPEMG00000014957) #31	Scnn1a (ENSPEMG00000012010) #32	Tnfrsf1a (ENSPEMG00000009612) #33	Plekhg6 (ENSPEMG00000013888) #34	Cd9 (ENSPEMG00000008270) #35	Vwf (ENSPEMG00000010217) #36
Murinae	ANCESTRAL SPECIES	4	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT01100000267007 #16	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Mus	ANCESTRAL SPECIES	12	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Mus_A	ANCESTRAL SPECIES	7	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Mus_B	ANCESTRAL SPECIES	15	ENSGT00390000017343.g	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904.e.a #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a.b.a.b ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00950000182825.B	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Mouse	MODERN SPECIES	15	Cdca3 (ENSMUSG00000023505)	Gnb3 (ENSMUSG00000023439)	P3h3 (ENSMUSG00000023191) #7	Gpr162 (ENSMUSG00000038390) #8	Cd4 (ENSMUSG00000023274) #9	Lag3 (ENSMUSG00000030124) #10	Ptms (ENSMUSG00000030122)	Mlf2 (ENSMUSG00000030120) #12	Cops7a (ENSMUSG00000030127) #13	Pianp (ENSMUSG00000030329) #14	Zfp384 (ENSMUSG00000038346) #15	Ing4 (ENSMUSG00000030330) #17	Acrbp (ENSMUSG00000072770) #18	Lpar5 (ENSMUSG00000067714) #20	Chd4 (ENSMUSG00000063870) #21	Nop2 (ENSMUSG00000038279) #22	Iffo1 (ENSMUSG00000038271) #23	Gapdh (ENSMUSG00000057666) ##24	Ncapd2 (ENSMUSG00000038252) #26	Mrpl51 (ENSMUSG00000030335) #27	Vamp1 (ENSMUSG00000030337) #28	Tapbpl (ENSMUSG00000038213) #29	Cd27 (ENSMUSG00000030336) #30	Tuba3a (ENSMUSG00000067702)	Ltbr (ENSMUSG00000030339) #31	Scnn1a (ENSMUSG00000030340) #32	Tnfrsf1a (ENSMUSG00000030341) #33	Plekhg6 (ENSMUSG00000038167) #34	Cd9 (ENSMUSG00000030342) #35	Vwf (ENSMUSG00000001930) #36	Ano2 (ENSMUSG00000038115)
Mus_C	ANCESTRAL SPECIES	18	ENSGT00390000017343.g	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01100000264105	ENSGT00940000168330	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904.e.a #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a.b.a.b ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00950000182825.B	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Steppe mouse	MODERN SPECIES	2453									Cops7a (ENSMSIG00000005376) #13	Pianp (ENSMSIG00000005454) #14	Zfp384 (ENSMSIG00000005490) #15	Ing4 (ENSMSIG00000005976) #17	Acrbp (ENSMSIG00000006066) #18	Lpar5 (ENSMSIG00000006314) #20	Chd4 (ENSMSIG00000006341) #21	Nop2 (ENSMSIG00000006620) #22	Iffo1 (ENSMSIG00000006668) #23	ENSMSIG00000006759 ##24	Ncapd2 (ENSMSIG00000006811) #26	Mrpl51 (ENSMSIG00000006876) #27	Vamp1 (ENSMSIG00000006906) #28	Tapbpl (ENSMSIG00000006978) #29	Cd27 (ENSMSIG00000007002) #30	ENSMSIG00000007122	Ltbr (ENSMSIG00000007137) #31	Scnn1a (ENSMSIG00000007175) #32	Tnfrsf1a (ENSMSIG00000007222) #33	Plekhg6 (ENSMSIG00000007258) #34
Rat	MODERN SPECIES	14	P3h3 (ENSRNOG00000071218) #7	Gpr162 (ENSRNOG00000016143) #8	ENSRNOG00000071219 #9	Lag3 (ENSRNOG00000021334) #10	Ptms (ENSRNOG00000060098)	AC115420.4 (ENSRNOG00000060308)	Mlf2 (ENSRNOG00000016589) #12	Cops7a (ENSRNOG00000016778) #13	Pianp (ENSRNOG00000017052) #14	Zfp384 (ENSRNOG00000017066) #15	ENSRNOG00000066393 #16	Acrbp (ENSRNOG00000017399) #18	Ing4 (ENSRNOG00000023363) #17	Lpar5 (ENSRNOG00000021401) #20	Chd4 (ENSRNOG00000018309) #21	Nop2 (ENSRNOG00000018453) #22	Iffo1 (ENSRNOG00000018533) #23	LOC108351137 (ENSRNOG00000018630) ##24	Ncapd2 (ENSRNOG00000055300) #26	Mrpl51 (ENSRNOG00000019165) #27	Vamp1 (ENSRNOG00000019219) #28	Cd27 (ENSRNOG00000027466) #30	Tuba3b (ENSRNOG00000031707)	Ltbr (ENSRNOG00000019264) #31	Scnn1a (ENSRNOG00000019368) #32	Tnfrsf1a (ENSRNOG00000031312) #33	Plekhg6 (ENSRNOG00000019528) #34	ENSRNOG00000064217	Cd9 (ENSRNOG00000019556) #35	Vwf (ENSRNOG00000019689) #36	Ano2 (ENSRNOG00000023561)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1885	Usp5 (ENSNGAG00000011453)	Cdca3 (ENSNGAG00000016633)	Gnb3 (ENSNGAG00000023501)	P3h3 (ENSNGAG00000015076) #7	Gpr162 (ENSNGAG00000002840) #8	ENSNGAG00000022963 #9	Lag3 (ENSNGAG00000009790) #10	ENSNGAG00000021065 #11	Mlf2 (ENSNGAG00000016666) #12	Cops7a (ENSNGAG00000022873) #13	Pianp (ENSNGAG00000013944) #14	Zfp384 (ENSNGAG00000011316) #15	Ing4 (ENSNGAG00000016704) #17	Acrbp (ENSNGAG00000022774) #18	Chd4 (ENSNGAG00000016920) #21	Nop2 (ENSNGAG00000019010) #22	Iffo1 (ENSNGAG00000013363) #23	ENSNGAG00000013476 #24	Ncapd2 (ENSNGAG00000021912) #26	Mrpl51 (ENSNGAG00000022754) #27	Vamp1 (ENSNGAG00000011610) #28	Tapbpl (ENSNGAG00000023020) #29	Cd27 (ENSNGAG00000019654) #30	Ltbr (ENSNGAG00000022402) #31	Scnn1a (ENSNGAG00000019351) #32	Tnfrsf1a (ENSNGAG00000019085) #33	Plekhg6 (ENSNGAG00000011808) #34	ENSNGAG00000022639	Cd9 (ENSNGAG00000014189) #35	Vwf (ENSNGAG00000022403) #36	Ano2 (ENSNGAG00000006568)
Lagomorpha	ANCESTRAL SPECIES	37	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Rabbit	MODERN SPECIES	19	USP5 (ENSOCUG00000003582)	CDCA3 (ENSOCUG00000022434)	GNB3 (ENSOCUG00000012934)	P3H3 (ENSOCUG00000012916) #7	GPR162 (ENSOCUG00000030705) #8	ENSOCUG00000012911 #9	LAG3 (ENSOCUG00000011196) #10	ENSOCUG00000003750 #12	COPS7A (ENSOCUG00000011187) #13	PIANP (ENSOCUG00000003749) #14	ZNF384 (ENSOCUG00000003747) #15	ING4 (ENSOCUG00000003742) #17	ACRBP (ENSOCUG00000003737) #18	LPAR5 (ENSOCUG00000026551) #20	CHD4 (ENSOCUG00000008215) #21	NOP2 (ENSOCUG00000008203) #22	ENSOCUG00000008198 #23	ENSOCUG00000029891 #24	NCAPD2 (ENSOCUG00000008176) #26	MRPL51 (ENSOCUG00000008170) #27	VAMP1 (ENSOCUG00000021107) #28	TAPBPL (ENSOCUG00000008163) #29	CD27 (ENSOCUG00000008159) #30	LTBR (ENSOCUG00000001292) #31	SCNN1A (ENSOCUG00000010152) #32	TNFRSF1A (ENSOCUG00000010146) #33	PLEKHG6 (ENSOCUG00000010130) #34	ENSOCUG00000010123 #35	VWF (ENSOCUG00000006783) #36	ENSOCUG00000006775	ENSOCUG00000039598
Pika	MODERN SPECIES	233	LRRC23 (ENSOPRG00000003927)	SPSB2 (ENSOPRG00000003916)	TPI1 (ENSOPRG00000003895)	USP5 (ENSOPRG00000003849)	CDCA3 (ENSOPRG00000003837)	GNB3 (ENSOPRG00000003814)	P3H3 (ENSOPRG00000003768) #7	CD4 (ENSOPRG00000003747) #9	LAG3 (ENSOPRG00000003706) #10	PTMS (ENSOPRG00000003690) #11	MLF2 (ENSOPRG00000003657) #12	COPS7A (ENSOPRG00000003640) #13	ZNF384 (ENSOPRG00000003626) #15	ACRBP (ENSOPRG00000003592) #18	CHD4 (ENSOPRG00000003477) #21	NOP2 (ENSOPRG00000003412) #22
Tree shrew	MODERN SPECIES	397													ACRBP (ENSTBEG00000011975) #18	LPAR5 (ENSTBEG00000011959) #20	CHD4 (ENSTBEG00000011379) #21	ENSTBEG00000010989 #22
Primates	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Haplorrhini	ANCESTRAL SPECIES	39	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00910000146795	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00910000148152	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00910000146795	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00910000148152	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35
Hominidae	ANCESTRAL SPECIES	4	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00910000146795	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00910000148152	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00910000148152	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00510000046986.n.a.b
Gorilla	MODERN SPECIES	3	CDCA3 (ENSGGOG00000002613)	GNB3 (ENSGGOG00000002609)	P3H3 (ENSGGOG00000002603) #7	GPR162 (ENSGGOG00000040285) #8	CD4 (ENSGGOG00000003230) #9	LAG3 (ENSGGOG00000003225) #10	ENSGGOG00000014593	MLF2 (ENSGGOG00000007930) #12	COPS7A (ENSGGOG00000009184) #13	PIANP (ENSGGOG00000016057) #14	ZNF384 (ENSGGOG00000016048) #15	ING4 (ENSGGOG00000016035) #17	ACRBP (ENSGGOG00000025663) #18	LPAR5 (ENSGGOG00000001937) #20	CHD4 (ENSGGOG00000001930) #21	NOP2 (ENSGGOG00000001926) #22	IFFO1 (ENSGGOG00000009558) #23	GAPDH (ENSGGOG00000009553) #24	NCAPD2 (ENSGGOG00000009536) #26	MRPL51 (ENSGGOG00000016199) #27	ENSGGOG00000041204	ENSGGOG00000004659	VAMP1 (ENSGGOG00000036332) #28	ENSGGOG00000041472	TAPBPL (ENSGGOG00000004655) #29	CD27 (ENSGGOG00000004650) #30	ENSGGOG00000022764	ENSGGOG00000024862	LTBR (ENSGGOG00000010848) #31	SCNN1A (ENSGGOG00000010834) #32	TNFRSF1A (ENSGGOG00000011904) #33
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00910000148152	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00510000046986.n.a.b	ENSGT00940000155083.b #35
Human	MODERN SPECIES	3	CDCA3 (ENSG00000111665)	GNB3 (ENSG00000111664)	P3H3 (ENSG00000110811) #7	GPR162 (ENSG00000250510) #8	CD4 (ENSG00000010610) #9	LAG3 (ENSG00000089692) #10	PTMS (ENSG00000159335) #11	MLF2 (ENSG00000089693) #12	COPS7A (ENSG00000111652) #13	PIANP (ENSG00000139200) #14	ZNF384 (ENSG00000126746) #15	ING4 (ENSG00000111653) #17	ACRBP (ENSG00000111644) #18	LPAR5 (ENSG00000184574) #20	CHD4 (ENSG00000111642) #21	NOP2 (ENSG00000111641) #22	IFFO1 (ENSG00000010295) #23	GAPDH (ENSG00000111640) #24	NCAPD2 (ENSG00000010292) #26	MRPL51 (ENSG00000111639) #27	VAMP1 (ENSG00000139190) #28	TAPBPL (ENSG00000139192) #29	CD27 (ENSG00000139193) #30	LTBR (ENSG00000111321) #31	SCNN1A (ENSG00000111319) #32	TNFRSF1A (ENSG00000067182) #33	PLEKHG6 (ENSG00000008323) #34	CD9 (ENSG00000010278) #35	VWF (ENSG00000110799) #36	ANO2 (ENSG00000047617)	NTF3 (ENSG00000185652)
Gibbon	MODERN SPECIES	15	CDCA3 (ENSNLEG00000004752)	GNB3 (ENSNLEG00000004736)	P3H3 (ENSNLEG00000004705) #7	GPR162 (ENSNLEG00000004700) #8	CD4 (ENSNLEG00000004671) #9	ENSNLEG00000004668 #10	ENSNLEG00000004666	MLF2 (ENSNLEG00000004587) #12	COPS7A (ENSNLEG00000004510) #13	PIANP (ENSNLEG00000032075) #14	ZNF384 (ENSNLEG00000004506) #15	ING4 (ENSNLEG00000004431) #17	ACRBP (ENSNLEG00000004414) #18	LPAR5 (ENSNLEG00000004406) #20	CHD4 (ENSNLEG00000004330) #21	NOP2 (ENSNLEG00000004242) #22	IFFO1 (ENSNLEG00000004195) #23	GAPDH (ENSNLEG00000003825) #24	NCAPD2 (ENSNLEG00000003743) #26	MRPL51 (ENSNLEG00000033120) #27	VAMP1 (ENSNLEG00000003714) #28	ENSNLEG00000030784	TAPBPL (ENSNLEG00000003709) #29	ENSNLEG00000032099	CD27 (ENSNLEG00000003696) #30	ENSNLEG00000003663 #31	ENSNLEG00000035453 #32	TNFRSF1A (ENSNLEG00000034897) #33	PLEKHG6 (ENSNLEG00000003548) #34	CD9 (ENSNLEG00000003491) #35	VWF (ENSNLEG00000003335) #36
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.a.a.a.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00910000148152	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00910000146795	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.a.a.a.a #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00910000148152	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35
Cercopithecinae_a	ANCESTRAL SPECIES	25	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00910000146795	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.a.a.a.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00910000148152	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35
Macaca	ANCESTRAL SPECIES	30	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00910000146795	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.a.a.a.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36
Macaca_a	ANCESTRAL SPECIES	6	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000237444	ENSGT00910000146795	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.a.a.a.a #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860
Crab-eating macaque	MODERN SPECIES	2	ENSMFAG00000032800	USP5 (ENSMFAG00000000814)	CDCA3 (ENSMFAG00000042353)	GNB3 (ENSMFAG00000029449)	GPR162 (ENSMFAG00000037690) #8	CD4 (ENSMFAG00000041228) #9	ENSMFAG00000033048	MLF2 (ENSMFAG00000060388) #12	COPS7A (ENSMFAG00000038467) #13	PIANP (ENSMFAG00000001518) #14	ZNF384 (ENSMFAG00000037538) #15	ING4 (ENSMFAG00000001174) #17	ACRBP (ENSMFAG00000005997) #18	LPAR5 (ENSMFAG00000064722) #20	CHD4 (ENSMFAG00000003188) #21	NOP2 (ENSMFAG00000004333) #22	IFFO1 (ENSMFAG00000045145) #23	ENSMFAG00000001880 #24	NCAPD2 (ENSMFAG00000036998) #26	ENSMFAG00000051100	ENSMFAG00000051196	TAPBPL (ENSMFAG00000035334) #29	VAMP1 (ENSMFAG00000035441) #28	LTBR (ENSMFAG00000043569) #31	SCNN1A (ENSMFAG00000035743) #32	TNFRSF1A (ENSMFAG00000042238) #33	PLEKHG6 (ENSMFAG00000032181) #34	CD9 (ENSMFAG00000034485) #35	VWF (ENSMFAG00000039466) #36	ENSMFAG00000061332	ENSMFAG00000047933
Vervet Monkey	MODERN SPECIES	2	CDCA3 (ENSCSAG00000010224)	GNB3 (ENSCSAG00000010234)	P3H3 (ENSCSAG00000010242) #7	GPR162 (ENSCSAG00000010255) #8	CD4 (ENSCSAG00000010263) #9	LAG3 (ENSCSAG00000010305) #10	ENSCSAG00000010328 #11	MLF2 (ENSCSAG00000010338) #12	COPS7A (ENSCSAG00000010346) #13	PIANP (ENSCSAG00000010351) #14	ZNF384 (ENSCSAG00000010379) #15	ING4 (ENSCSAG00000010403) #17	ACRBP (ENSCSAG00000010413) #18	LPAR5 (ENSCSAG00000019222) #20	CHD4 (ENSCSAG00000010429) #21	NOP2 (ENSCSAG00000010484) #22	IFFO1 (ENSCSAG00000010518) #23	ENSCSAG00000010531 #24	NCAPD2 (ENSCSAG00000010550) #26	MRPL51 (ENSCSAG00000010565) #27	ENSCSAG00000010592 #28	TAPBPL (ENSCSAG00000010603) #29	CD27 (ENSCSAG00000010635) #30	LTBR (ENSCSAG00000010660) #31	SCNN1A (ENSCSAG00000010676) #32	TNFRSF1A (ENSCSAG00000010687) #33	PLEKHG6 (ENSCSAG00000010727) #34	CD9 (ENSCSAG00000010749) #35	VWF (ENSCSAG00000010786) #36	ANO2 (ENSCSAG00000010915)	NTF3 (ENSCSAG00000010965)
Rhinopithecus	ANCESTRAL SPECIES	54	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00910000146795	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.a.a.a.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821.n #27	ENSGT00940000161390 #28	ENSGT01030000240266	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36
Golden snub-nosed monkey	MODERN SPECIES	2549	CDCA3 (ENSRROG00000042250)	GNB3 (ENSRROG00000023776)	P3H3 (ENSRROG00000030746) #7	GPR162 (ENSRROG00000042378) #8	CD4 (ENSRROG00000028161) #9	LAG3 (ENSRROG00000030083) #10	ENSRROG00000044634	MLF2 (ENSRROG00000038823) #12	COPS7A (ENSRROG00000041726) #13	PIANP (ENSRROG00000034978) #14	ZNF384 (ENSRROG00000034990) #15	ING4 (ENSRROG00000040119) #17	ACRBP (ENSRROG00000036460) #18	LPAR5 (ENSRROG00000018849) #20	CHD4 (ENSRROG00000042446) #21	NOP2 (ENSRROG00000041019) #22	IFFO1 (ENSRROG00000039769) #23	ENSRROG00000030690 #24	NCAPD2 (ENSRROG00000037510) #26	ENSRROG00000033245 #27	VAMP1 (ENSRROG00000035855) #28	TAPBPL (ENSRROG00000045610) #29	ENSRROG00000033196	CD27 (ENSRROG00000030539) #30	LTBR (ENSRROG00000041807) #31	SCNN1A (ENSRROG00000044856) #32	TNFRSF1A (ENSRROG00000029169) #33	PLEKHG6 (ENSRROG00000041873) #34	CD9 (ENSRROG00000013322) #35	VWF (ENSRROG00000042864) #36	ANO2 (ENSRROG00000039334)
Platyrrhini	ANCESTRAL SPECIES	46	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.d.b.a #24	ENSGT00940000153566.a.g #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Cebidae	ANCESTRAL SPECIES	41	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.d.b.a #24	ENSGT00940000153566.a.g #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Marmoset	MODERN SPECIES	21	CDCA3 (ENSCJAG00000007508)	GNB3 (ENSCJAG00000007512)	P3H3 (ENSCJAG00000007528) #7	GPR162 (ENSCJAG00000044634) #8	CD4 (ENSCJAG00000007635) #9	LAG3 (ENSCJAG00000007657) #10	ENSCJAG00000038843 #11	MLF2 (ENSCJAG00000007681) #12	COPS7A (ENSCJAG00000007835) #13	PIANP (ENSCJAG00000007910) #14	ZNF384 (ENSCJAG00000007944) #15	ING4 (ENSCJAG00000008004) #17	ACRBP (ENSCJAG00000008090) #18	LPAR5 (ENSCJAG00000083060) #20	CHD4 (ENSCJAG00000008114) #21	NOP2 (ENSCJAG00000008179) #22	IFFO1 (ENSCJAG00000037676) #23	ENSCJAG00000008234 #24	ENSCJAG00000084549 #27	NCAPD2 (ENSCJAG00000007561) #26	ENSCJAG00000065290 #27	ENSCJAG00000046151	VAMP1 (ENSCJAG00000044254) #28	TAPBPL (ENSCJAG00000000722) #29	CD27 (ENSCJAG00000000719) #30	LTBR (ENSCJAG00000000706) #31	SCNN1A (ENSCJAG00000000689) #32	TNFRSF1A (ENSCJAG00000000674) #33	PLEKHG6 (ENSCJAG00000000666) #34	CD9 (ENSCJAG00000000659) #35	VWF (ENSCJAG00000000613) #36
Cebidae_a	ANCESTRAL SPECIES	94									ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.a.d.b.a #24	ENSGT00940000153566.a.g #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146645	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Bolivian squirrel monkey	MODERN SPECIES	197							ENSSBOG00000004230	ENSSBOG00000024104	COPS7A (ENSSBOG00000016629) #13	PIANP (ENSSBOG00000022052) #14	ZNF384 (ENSSBOG00000020182) #15	ING4 (ENSSBOG00000016889) #17	ACRBP (ENSSBOG00000020904) #18	LPAR5 (ENSSBOG00000016658) #20	CHD4 (ENSSBOG00000020782) #21	NOP2 (ENSSBOG00000034622) #22	IFFO1 (ENSSBOG00000020913) #23	ENSSBOG00000030439 #24	ENSSBOG00000029006 #26	MRPL51 (ENSSBOG00000028416) #27	VAMP1 (ENSSBOG00000017216) #28	TAPBPL (ENSSBOG00000025031) #29	ENSSBOG00000019610	CD27 (ENSSBOG00000023847) #30	LTBR (ENSSBOG00000031167) #31	SCNN1A (ENSSBOG00000028462) #32	TNFRSF1A (ENSSBOG00000029812) #33	PLEKHG6 (ENSSBOG00000029167) #34	CD9 (ENSSBOG00000021142) #35	VWF (ENSSBOG00000029305) #36	ANO2 (ENSSBOG00000031554)
Tarsier	MODERN SPECIES	2399															CHD4 (ENSTSYG00000006069) #21	NOP2 (ENSTSYG00000006030) #22	ENSTSYG00000031266 #23
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a.f #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Lemuriformes	ANCESTRAL SPECIES	41	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a.f #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.b.f.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Lemuriformes_a	ANCESTRAL SPECIES	33	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a.f #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.a.b.f.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Greater bamboo lemur	MODERN SPECIES	605	USP5 (ENSPSMG00000015879)	CDCA3 (ENSPSMG00000015938)	GNB3 (ENSPSMG00000016055)	P3H3 (ENSPSMG00000016162) #7	GPR162 (ENSPSMG00000016191) #8	CD4 (ENSPSMG00000016207) #9	LAG3 (ENSPSMG00000016218) #10	PTMS (ENSPSMG00000016228) #11	MLF2 (ENSPSMG00000016257) #12	COPS7A (ENSPSMG00000016330) #13	PIANP (ENSPSMG00000016352) #14	ZNF384 (ENSPSMG00000016435) #15	ACRBP (ENSPSMG00000016571) #18	LPAR5 (ENSPSMG00000016626) #20	CHD4 (ENSPSMG00000016974) #21	NOP2 (ENSPSMG00000017335) #22	IFFO1 (ENSPSMG00000017410) #23	ENSPSMG00000017469 #26	MRPL51 (ENSPSMG00000017485) #27	VAMP1 (ENSPSMG00000017542) #28	ENSPSMG00000017569 #29	CD27 (ENSPSMG00000017574) #30	LTBR (ENSPSMG00000017627) #31	SCNN1A (ENSPSMG00000017657) #32	TNFRSF1A (ENSPSMG00000017682) #33	PLEKHG6 (ENSPSMG00000017750) #34	CD9 (ENSPSMG00000017856) #35	VWF (ENSPSMG00000018040) #36	ANO2 (ENSPSMG00000018090)	NTF3 (ENSPSMG00000018107)
Mouse lemur	MODERN SPECIES	29	USP5 (ENSMICG00000001749)	CDCA3 (ENSMICG00000001744)	GNB3 (ENSMICG00000015148)	P3H3 (ENSMICG00000042131) #7	GPR162 (ENSMICG00000001963) #8	CD4 (ENSMICG00000027649) #9	LAG3 (ENSMICG00000044236) #10	PTMS (ENSMICG00000036709) #11	MLF2 (ENSMICG00000048017) #12	COPS7A (ENSMICG00000013661) #13	PIANP (ENSMICG00000026350) #14	ZNF384 (ENSMICG00000006636) #15	ING4 (ENSMICG00000006626) #17	ACRBP (ENSMICG00000006616) #18	CHD4 (ENSMICG00000006588) #21	NOP2 (ENSMICG00000006570) #22	IFFO1 (ENSMICG00000006558) #23	ENSMICG00000006546 #24	NCAPD2 (ENSMICG00000006519) #26	MRPL51 (ENSMICG00000027914) #27	VAMP1 (ENSMICG00000006507) #28	TAPBPL (ENSMICG00000006498) #29	CD27 (ENSMICG00000043982) #30	ENSMICG00000030640 #31	SCNN1A (ENSMICG00000009254) #32	TNFRSF1A (ENSMICG00000009249) #33	PLEKHG6 (ENSMICG00000009241) #34	CD9 (ENSMICG00000009235) #35	VWF (ENSMICG00000004782) #36	ANO2 (ENSMICG00000004767)	NTF3 (ENSMICG00000027428)
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Carnivora	ANCESTRAL SPECIES	3	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Caniformia	ANCESTRAL SPECIES	19	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q.l #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q.l #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Ursidae	ANCESTRAL SPECIES	25	ENSGT00940000156036	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873.b #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q.l #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b.j #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Ursus	ANCESTRAL SPECIES	103	ENSGT00940000156036	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873.b #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00940000153298.n.q.k.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b.j #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860
Polar bear	MODERN SPECIES	484	SPSB2 (ENSUMAG00000004129)	TPI1 (ENSUMAG00000004130)	USP5 (ENSUMAG00000004200)	CDCA3 (ENSUMAG00000004864)	GNB3 (ENSUMAG00000004881)	P3H3 (ENSUMAG00000004936) #7	CD4 (ENSUMAG00000004996) #9	LAG3 (ENSUMAG00000005008) #10	MLF2 (ENSUMAG00000005049) #12	COPS7A (ENSUMAG00000005057) #13	PIANP (ENSUMAG00000005067) #14	ZNF384 (ENSUMAG00000005073) #15	ING4 (ENSUMAG00000005092) #17	ACRBP (ENSUMAG00000005096) #18	CHD4 (ENSUMAG00000005336) #21	NOP2 (ENSUMAG00000007220) #22	GAPDH (ENSUMAG00000007239) #24	NCAPD2 (ENSUMAG00000007255) #26	MRPL51 (ENSUMAG00000007393) #27	ENSUMAG00000007395 #28	TAPBPL (ENSUMAG00000007397) #29	CD27 (ENSUMAG00000007399) #30	LTBR (ENSUMAG00000007402) #31	SCNN1A (ENSUMAG00000007429) #32	ENSUMAG00000007495 #33	PLEKHG6 (ENSUMAG00000007501) #34	CD9 (ENSUMAG00000007507) #35	VWF (ENSUMAG00000007512) #36	ANO2 (ENSUMAG00000007545)	NTF3 (ENSUMAG00000007725)	KCNA5 (ENSUMAG00000007733)
American black bear	MODERN SPECIES	2013								MLF2 (ENSUAMG00000022896) #12	COPS7A (ENSUAMG00000022895) #13	PIANP (ENSUAMG00000022893) #14	ZNF384 (ENSUAMG00000022892) #15	ING4 (ENSUAMG00000022890) #17	ACRBP (ENSUAMG00000022888) #18	LPAR5 (ENSUAMG00000022887) #20	CHD4 (ENSUAMG00000016452) #21	NOP2 (ENSUAMG00000016105) #22
Giant Panda	MODERN SPECIES	7	CDCA3 (ENSAMEG00000013985)	GNB3 (ENSAMEG00000013993)	P3H3 (ENSAMEG00000014022) #7	GPR162 (ENSAMEG00000014035) #8	CD4 (ENSAMEG00000014043) #9	LAG3 (ENSAMEG00000014063) #10	ENSAMEG00000014074	MLF2 (ENSAMEG00000014077) #12	COPS7A (ENSAMEG00000014096) #13	PIANP (ENSAMEG00000014112) #14	ZNF384 (ENSAMEG00000014121) #15	ING4 (ENSAMEG00000014135) #17	ACRBP (ENSAMEG00000014163) #18	LPAR5 (ENSAMEG00000031134) #20	CHD4 (ENSAMEG00000014179) #21	NOP2 (ENSAMEG00000014268) #22	IFFO1 (ENSAMEG00000014300) #23	GAPDH (ENSAMEG00000014329) #24	NCAPD2 (ENSAMEG00000014358) #26	MRPL51 (ENSAMEG00000014426) #27	VAMP1 (ENSAMEG00000014438) #28	TAPBPL (ENSAMEG00000014448) #29	CD27 (ENSAMEG00000014466) #30	LTBR (ENSAMEG00000014476) #31	SCNN1A (ENSAMEG00000014498) #32	TNFRSF1A (ENSAMEG00000014569) #33	ENSAMEG00000014597 #34	CD9 (ENSAMEG00000014604) #35	ENSAMEG00000006889	VWF (ENSAMEG00000011272) #36	ANO2 (ENSAMEG00000011274)
Mustelinae	ANCESTRAL SPECIES	95	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q.l #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Ferret	MODERN SPECIES	284	GNB3 (ENSMPUG00000016783)	P3H3 (ENSMPUG00000016793) #7	GPR162 (ENSMPUG00000016806) #8	CD4 (ENSMPUG00000016809) #9	LAG3 (ENSMPUG00000016825) #10	ENSMPUG00000016828	PTMS (ENSMPUG00000016830) #11	MLF2 (ENSMPUG00000016834) #12	COPS7A (ENSMPUG00000016835) #13	PIANP (ENSMPUG00000016836) #14	ZNF384 (ENSMPUG00000016838) #15	ING4 (ENSMPUG00000016840) #17	ACRBP (ENSMPUG00000016855) #18	LPAR5 (ENSMPUG00000020129) #20	CHD4 (ENSMPUG00000016859) #21	NOP2 (ENSMPUG00000016865) #22	IFFO1 (ENSMPUG00000016884) #23	GAPDH (ENSMPUG00000016891) #24	NCAPD2 (ENSMPUG00000016901) #26	MRPL51 (ENSMPUG00000016904) #27	VAMP1 (ENSMPUG00000016905) #28	TAPBPL (ENSMPUG00000016907) #29	CD27 (ENSMPUG00000016908) #30	SCNN1A (ENSMPUG00000016912) #32	LTBR (ENSMPUG00000016913) #31	TNFRSF1A (ENSMPUG00000016915) #33	PLEKHG6 (ENSMPUG00000016918) #34	CD9 (ENSMPUG00000016921) #35	VWF (ENSMPUG00000016935) #36	ANO2 (ENSMPUG00000016940)	NTF3 (ENSMPUG00000020130)
American mink	MODERN SPECIES	333	CDCA3 (ENSNVIG00000024628)	GNB3 (ENSNVIG00000024629)	P3H3 (ENSNVIG00000024630) #7	GPR162 (ENSNVIG00000024631) #8	CD4 (ENSNVIG00000024632) #9	LAG3 (ENSNVIG00000024633) #10	PTMS (ENSNVIG00000024634) #11	MLF2 (ENSNVIG00000024635) #12	CSN7A (ENSNVIG00000024636) #13	PIANP (ENSNVIG00000024637) #14	ZNF384 (ENSNVIG00000024638) #15	ING4 (ENSNVIG00000024639) #17	ACRBP (ENSNVIG00000024640) #18	LPAR5 (ENSNVIG00000024641) #20	CHD4 (ENSNVIG00000024642) #21	NOP2 (ENSNVIG00000024649) #22	ENSNVIG00000024651	IFFO1 (ENSNVIG00000024654) #23	ENSNVIG00000024662 #24	NCAPD2 (ENSNVIG00000024666) #26	RM51 (ENSNVIG00000024669) #27	VAMP1 (ENSNVIG00000024673) #28	ENSNVIG00000024678	TAPBPL (ENSNVIG00000024679) #29	CD27 (ENSNVIG00000024681) #30	LTBR (ENSNVIG00000024684) #31	SCNN1A (ENSNVIG00000024691) #32	TNFRSF1A (ENSNVIG00000024699) #33	PLEKHG6 (ENSNVIG00000024709) #34	CD9 (ENSNVIG00000024720) #35	VWF (ENSNVIG00000024722) #36
Canidae	ANCESTRAL SPECIES	8	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q.l.h.a #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q.l.h.a #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Dingo	MODERN SPECIES	56	CDCA3 (ENSCAFG00020003055)	GNB3 (ENSCAFG00020003050)	P3H3 (ENSCAFG00020003004) #7	GPR162 (ENSCAFG00020002990) #8	CD4 (ENSCAFG00020002986) #9	LAG3 (ENSCAFG00020002976) #10	ENSCAFG00020002965 #11	MLF2 (ENSCAFG00020002950) #12	COPS7A (ENSCAFG00020002947) #13	PIANP (ENSCAFG00020002942) #14	ZNF384 (ENSCAFG00020002932) #15	ING4 (ENSCAFG00020002927) #17	ACRBP (ENSCAFG00020002916) #18	LPAR5 (ENSCAFG00020002907) #20	CHD4 (ENSCAFG00020002892) #21	NOP2 (ENSCAFG00020002884) #22	IFFO1 (ENSCAFG00020002877) #23	NCAPD2 (ENSCAFG00020002859) #26	MRPL51 (ENSCAFG00020002857) #27	VAMP1 (ENSCAFG00020002856) #28	TAPBPL (ENSCAFG00020002854) #29	CD27 (ENSCAFG00020002851) #30	ENSCAFG00020002845 #31
Dog	MODERN SPECIES	19	CDCA3 (ENSCAFG00845027345)	GNB3 (ENSCAFG00845027447)	P3H3 (ENSCAFG00845027539) #7	GPR162 (ENSCAFG00845027631) #8	CD4 (ENSCAFG00845027739) #9	LAG3 (ENSCAFG00845027788) #10	PTMS (ENSCAFG00845027847) #11	MLF2 (ENSCAFG00845027898) #12	COPS7A (ENSCAFG00845027958) #13	PIANP (ENSCAFG00845028055) #14	ZNF384 (ENSCAFG00845028247) #15	ENSCAFG00845028378	ACRBP (ENSCAFG00845028419) #18	LPAR5 (ENSCAFG00845028579) #20	CHD4 (ENSCAFG00845028632) #21	NOP2 (ENSCAFG00845028743) #22	IFFO1 (ENSCAFG00845028853) #23	GAPDH (ENSCAFG00845028918) #24	NCAPD2 (ENSCAFG00845028959) #26	MRPL51 (ENSCAFG00845029018) #27	VAMP1 (ENSCAFG00845029081) #28	TAPBPL (ENSCAFG00845029155) #29	CD27 (ENSCAFG00845029234) #30	LTBR (ENSCAFG00845029256) #31	SCNN1A (ENSCAFG00845029331) #32	ENSCAFG00845029433 #33	PLEKHG6 (ENSCAFG00845029568) #34	CD9 (ENSCAFG00845029613) #35	VWF (ENSCAFG00845029798) #36	ANO2 (ENSCAFG00845030210)	NTF3 (ENSCAFG00845030324)
Red fox	MODERN SPECIES	18	USP5 (ENSVVUG00000011044)	CDCA3 (ENSVVUG00000011065)	GNB3 (ENSVVUG00000011081)	P3H3 (ENSVVUG00000011231) #7	GPR162 (ENSVVUG00000011261) #8	CD4 (ENSVVUG00000011267) #9	LAG3 (ENSVVUG00000011272) #10	MLF2 (ENSVVUG00000011279) #12	COPS7A (ENSVVUG00000011285) #13	PIANP (ENSVVUG00000011301) #14	ZNF384 (ENSVVUG00000011329) #15	ING4 (ENSVVUG00000011352) #17	ACRBP (ENSVVUG00000011379) #18	LPAR5 (ENSVVUG00000011401) #20	CHD4 (ENSVVUG00000011414) #21	NOP2 (ENSVVUG00000011466) #22	IFFO1 (ENSVVUG00000011850) #23	NCAPD2 (ENSVVUG00000011972) #26	MRPL51 (ENSVVUG00000012022) #27	ENSVVUG00000012024 #28	TAPBPL (ENSVVUG00000012035) #29	CD27 (ENSVVUG00000012048) #30	LTBR (ENSVVUG00000012052) #31	SCNN1A (ENSVVUG00000012062) #32	ENSVVUG00000012070 #33	PLEKHG6 (ENSVVUG00000012077) #34	CD9 (ENSVVUG00000012181) #35	VWF (ENSVVUG00000012603) #36	ANO2 (ENSVVUG00000017708)	NTF3 (ENSVVUG00000017711)	ENSVVUG00000017715
Felidae	ANCESTRAL SPECIES	2	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Panthera	ANCESTRAL SPECIES		ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
lion	MODERN SPECIES	7	CDCA3 (ENSPLOG00000002825)	GNB3 (ENSPLOG00000002795)	P3H3 (ENSPLOG00000002749) #7	GPR162 (ENSPLOG00000002701) #8	CD4 (ENSPLOG00000002666) #9	LAG3 (ENSPLOG00000002630) #10	PTMS (ENSPLOG00000002603) #11	MLF2 (ENSPLOG00000002583) #12	COPS7A (ENSPLOG00000002565) #13	PIANP (ENSPLOG00000002539) #14	ZNF384 (ENSPLOG00000002498) #15	ING4 (ENSPLOG00000002451) #17	ACRBP (ENSPLOG00000002396) #18	LPAR5 (ENSPLOG00000002380) #20	CHD4 (ENSPLOG00000001912) #21	NOP2 (ENSPLOG00000001635) #22	IFFO1 (ENSPLOG00000001507) #23	GAPDH (ENSPLOG00000001339) #24	NCAPD2 (ENSPLOG00000001201) #26	MRPL51 (ENSPLOG00000001173) #27	VAMP1 (ENSPLOG00000001138) #28	TAPBPL (ENSPLOG00000001078) #29	CD27 (ENSPLOG00000001037) #30	LTBR (ENSPLOG00000000954) #31	SCNN1A (ENSPLOG00000000874) #32	TNFRSF1A (ENSPLOG00000000829) #33	PLEKHG6 (ENSPLOG00000000617) #34	CD9 (ENSPLOG00000015832) #35	VWF (ENSPLOG00000015265) #36	ANO2 (ENSPLOG00000014508)	NTF3 (ENSPLOG00000014447)
leopard	MODERN SPECIES	45	USP5 (ENSPPRG00000020797)	CDCA3 (ENSPPRG00000014482)	GNB3 (ENSPPRG00000013637)	P3H3 (ENSPPRG00000012543) #7	ENSPPRG00000012222 #8	CD4 (ENSPPRG00000011287) #9	LAG3 (ENSPPRG00000010078) #10	PTMS (ENSPPRG00000009564) #11	ENSPPRG00000009219	COPS7A (ENSPPRG00000008884) #13	PIANP (ENSPPRG00000007131) #14	ZNF384 (ENSPPRG00000006494) #15	ING4 (ENSPPRG00000004136) #17	ACRBP (ENSPPRG00000002388) #18	CHD4 (ENSPPRG00000001388) #21	NOP2 (ENSPPRG00000012300) #22	IFFO1 (ENSPPRG00000008354) #23	ENSPPRG00000005020 #24	NCAPD2 (ENSPPRG00000001126) #26	MRPL51 (ENSPPRG00000000742) #27	VAMP1 (ENSPPRG00000000234) #28	TAPBPL (ENSPPRG00000022848) #29	ENSPPRG00000022113	CD27 (ENSPPRG00000020532) #30	LTBR (ENSPPRG00000016051) #31	SCNN1A (ENSPPRG00000012858) #32	TNFRSF1A (ENSPPRG00000009962) #33	PLEKHG6 (ENSPPRG00000008925) #34	CD9 (ENSPPRG00000005804) #35	VWF (ENSPPRG00000004677) #36	ANO2 (ENSPPRG00000001953)
Tiger	MODERN SPECIES	306	CDCA3 (ENSPTIG00000021746)	GNB3 (ENSPTIG00000000824)	P3H3 (ENSPTIG00000003404) #7	ENSPTIG00000005722 #8	CD4 (ENSPTIG00000006621) #9	LAG3 (ENSPTIG00000008140) #10	ENSPTIG00000008812	PTMS (ENSPTIG00000009333) #11	MLF2 (ENSPTIG00000010093) #12	COPS7A (ENSPTIG00000011947) #13	PIANP (ENSPTIG00000013952) #14	ZNF384 (ENSPTIG00000014865) #15	ING4 (ENSPTIG00000020118) #17	ACRBP (ENSPTIG00000008221) #18	CHD4 (ENSPTIG00000010979) #21	NOP2 (ENSPTIG00000020543) #22	ENSPTIG00000009245 #23	GAPDH (ENSPTIG00000010777) #24	NCAPD2 (ENSPTIG00000015885) #26	MRPL51 (ENSPTIG00000016877) #27	VAMP1 (ENSPTIG00000018179) #28	ENSPTIG00000018791	TAPBPL (ENSPTIG00000019354) #29	CD27 (ENSPTIG00000004351) #30	ENSPTIG00000006690	LTBR (ENSPTIG00000005394) #31	SCNN1A (ENSPTIG00000005994) #32	ENSPTIG00000009056 #33	PLEKHG6 (ENSPTIG00000010482) #34	CD9 (ENSPTIG00000015011) #35	VWF (ENSPTIG00000017098) #36
Cat	MODERN SPECIES	238	CDCA3 (ENSFCAG00000004274)	GNB3 (ENSFCAG00000012371)	P3H3 (ENSFCAG00000004270) #7	GPR162 (ENSFCAG00000024524) #8	CD4 (ENSFCAG00000004269) #9	LAG3 (ENSFCAG00000006886) #10	PTMS (ENSFCAG00000043997) #11	ENSFCAG00000032640	COPS7A (ENSFCAG00000043178) #13	PIANP (ENSFCAG00000024891) #14	ZNF384 (ENSFCAG00000006882) #15	ING4 (ENSFCAG00000006880) #17	ACRBP (ENSFCAG00000006879) #18	LPAR5 (ENSFCAG00000006878) #20	CHD4 (ENSFCAG00000006877) #21	NOP2 (ENSFCAG00000006876) #22	IFFO1 (ENSFCAG00000029815) #23	GAPDH (ENSFCAG00000006874) #24	NCAPD2 (ENSFCAG00000006873) #26	MRPL51 (ENSFCAG00000043270) #27	VAMP1 (ENSFCAG00000036228) #28	TAPBPL (ENSFCAG00000006871) #29	CD27 (ENSFCAG00000006870) #30	LTBR (ENSFCAG00000008592) #31	SCNN1A (ENSFCAG00000006869) #32	TNFRSF1A (ENSFCAG00000006868) #33	PLEKHG6 (ENSFCAG00000006865) #34	CD9 (ENSFCAG00000034944) #35	VWF (ENSFCAG00000006861) #36	ENSFCAG00000034293	ANO2 (ENSFCAG00000006860)
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Greater horseshoe bat	MODERN SPECIES	1	GNB3 (ENSRFEG00010003179)	P3H3 (ENSRFEG00010003127) #7	GPR162 (ENSRFEG00010003086) #8	CD4 (ENSRFEG00010003064) #9	LAG3 (ENSRFEG00010003036) #10	PTMS (ENSRFEG00010003014) #11	MLF2 (ENSRFEG00010002982) #12	COPS7A (ENSRFEG00010002955) #13	ENSRFEG00010002934	PIANP (ENSRFEG00010002897) #14	ZNF384 (ENSRFEG00010002854) #15	ING4 (ENSRFEG00010002769) #17	ACRBP (ENSRFEG00010002675) #18	LPAR5 (ENSRFEG00010002641) #20	CHD4 (ENSRFEG00010002190) #21	NOP2 (ENSRFEG00010001957) #22	IFFO1 (ENSRFEG00010001885) #23	ENSRFEG00010001850 ##24	NCAPD2 (ENSRFEG00010001784) #26	MRPL51 (ENSRFEG00010001755) #27	TAPBPL (ENSRFEG00010001724) #29	CD27 (ENSRFEG00010001691) #30	LTBR (ENSRFEG00010001600) #31	VAMP1 (ENSRFEG00010001570) #28	SCNN1A (ENSRFEG00010001487) #32	TNFRSF1A (ENSRFEG00010001395) #33	PLEKHG6 (ENSRFEG00010001287) #34	CD9 (ENSRFEG00010001199) #35	VWF (ENSRFEG00010001025) #36	ANO2 (ENSRFEG00010000920)	NTF3 (ENSRFEG00010000870)
Microbat	MODERN SPECIES	947	CDCA3 (ENSMLUG00000006726)	GNB3 (ENSMLUG00000006739)	P3H3 (ENSMLUG00000006754) #7	GPR162 (ENSMLUG00000022349) #8	CD4 (ENSMLUG00000024020) #9	LAG3 (ENSMLUG00000013787) #10	PTMS (ENSMLUG00000013783) #11	MLF2 (ENSMLUG00000013779) #12	COPS7A (ENSMLUG00000013776) #13	PIANP (ENSMLUG00000004845) #14	ZNF384 (ENSMLUG00000013771) #15	ING4 (ENSMLUG00000029523) #17	ACRBP (ENSMLUG00000025466) #18	LPAR5 (ENSMLUG00000013768) #20	CHD4 (ENSMLUG00000014343) #21	NOP2 (ENSMLUG00000014333) #22	IFFO1 (ENSMLUG00000014327) #23	ENSMLUG00000014320 #24	NCAPD2 (ENSMLUG00000014309) #26	VAMP1 (ENSMLUG00000014307) #28	TAPBPL (ENSMLUG00000014300) #29	CD27 (ENSMLUG00000014298) #30	LTBR (ENSMLUG00000014294) #31	SCNN1A (ENSMLUG00000014284) #32	TNFRSF1A (ENSMLUG00000014278) #33	PLEKHG6 (ENSMLUG00000014270) #34	CD9 (ENSMLUG00000006901) #35	VWF (ENSMLUG00000015993) #36	ANO2 (ENSMLUG00000015973)	NTF3 (ENSMLUG00000012482)	KCNA5 (ENSMLUG00000015804)
Megabat	MODERN SPECIES	3606															CHD4 (ENSPVAG00000012574) #21	NOP2 (ENSPVAG00000012572) #22	IFFO1 (ENSPVAG00000012571) #23	ENSPVAG00000012570	NCAPD2 (ENSPVAG00000012567) #26	MRPL51 (ENSPVAG00000012566) #27	VAMP1 (ENSPVAG00000012565) #28	TAPBPL (ENSPVAG00000012563) #29	CD27 (ENSPVAG00000012562) #30	LTBR (ENSPVAG00000012560) #31	SCNN1A (ENSPVAG00000012558) #32	TNFRSF1A (ENSPVAG00000012556) #33	PLEKHG6 (ENSPVAG00000012554) #34
Equus	ANCESTRAL SPECIES	28	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q.g.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00910000146741	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Donkey	MODERN SPECIES	14	CDCA3 (ENSEASG00005016075)	GNB3 (ENSEASG00005016089)	P3H3 (ENSEASG00005016118) #7	GPR162 (ENSEASG00005016119) #8	CD4 (ENSEASG00005016122) #9	LAG3 (ENSEASG00005016128) #10	ENSEASG00005016131 #11	MLF2 (ENSEASG00005016135) #12	COPS7A (ENSEASG00005016138) #13	PIANP (ENSEASG00005016141) #14	ZNF384 (ENSEASG00005016142) #15	ING4 (ENSEASG00005016144) #17	ACRBP (ENSEASG00005025354) #18	LPAR5 (ENSEASG00005033413) #20	CHD4 (ENSEASG00005016150) #21	NOP2 (ENSEASG00005016153) #22	IFFO1 (ENSEASG00005016154) #23	ENSEASG00005016156 #24	NCAPD2 (ENSEASG00005016158) #26	MRPL51 (ENSEASG00005035991) #27	ENSEASG00005035678	TAPBPL (ENSEASG00005016162) #29	ENSEASG00005036568 #30	VAMP1 (ENSEASG00005037737) #28	LTBR (ENSEASG00005016171) #31	SCNN1A (ENSEASG00005016173) #32	TNFRSF1A (ENSEASG00005016176) #33	PLEKHG6 (ENSEASG00005016179) #34	CD9 (ENSEASG00005016182) #35	VWF (ENSEASG00005016355) #36	ANO2 (ENSEASG00005016961)
Horse	MODERN SPECIES	27	USP5 (ENSECAG00000014532)	CDCA3 (ENSECAG00000014517)	P3H3 (ENSECAG00000021815) #7	ENSECAG00000054174	CD4 (ENSECAG00000009049) #9	LAG3 (ENSECAG00000002971) #10	ENSECAG00000042372 #11	MLF2 (ENSECAG00000022587) #12	COPS7A (ENSECAG00000015911) #13	PIANP (ENSECAG00000015893) #14	ZNF384 (ENSECAG00000009490) #15	ING4 (ENSECAG00000024784) #17	LPAR5 (ENSECAG00000023339) #20	ACRBP (ENSECAG00000023343) #18	CHD4 (ENSECAG00000022005) #21	NOP2 (ENSECAG00000012639) #22	IFFO1 (ENSECAG00000010254) #23	GAPDH (ENSECAG00000022051) #24	NCAPD2 (ENSECAG00000017796) #26	ENSECAG00000040327	TAPBPL (ENSECAG00000012920) #29	CD27 (ENSECAG00000011126) #30	VAMP1 (ENSECAG00000014602) #28	LTBR (ENSECAG00000000458) #31	SCNN1A (ENSECAG00000001443) #32	TNFRSF1A (ENSECAG00000016330) #33	PLEKHG6 (ENSECAG00000012373) #34	CD9 (ENSECAG00000003002) #35	VWF (ENSECAG00000010778) #36	ANO2 (ENSECAG00000024617)	NTF3 (ENSECAG00000024611)
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Suina	ANCESTRAL SPECIES	4	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Chacoan peccary	MODERN SPECIES	901	GNB3 (ENSCWAG00000004448)	P3H3 (ENSCWAG00000004391) #7	GPR162 (ENSCWAG00000004328) #8	ENSCWAG00000004287 #9	ENSCWAG00000004259 #9	LAG3 (ENSCWAG00000004203) #10	PTMS (ENSCWAG00000004167) #11	MLF2 (ENSCWAG00000004129) #12	COPS7A (ENSCWAG00000004095) #13	PIANP (ENSCWAG00000004033) #14	ZNF384 (ENSCWAG00000003930) #15	ING4 (ENSCWAG00000020218) #17	ACRBP (ENSCWAG00000020184) #18	LPAR5 (ENSCWAG00000020180) #20	CHD4 (ENSCWAG00000020000) #21	NOP2 (ENSCWAG00000019949) #22	IFFO1 (ENSCWAG00000019666) #23	GAPDH (ENSCWAG00000019631) #24	NCAPD2 (ENSCWAG00000019604) #26	MRPL51 (ENSCWAG00000019574) #27	VAMP1 (ENSCWAG00000019488) #28	TAPBPL (ENSCWAG00000019420) #29	CD27 (ENSCWAG00000019371) #30	LTBR (ENSCWAG00000019319) #31	SCNN1A (ENSCWAG00000019063) #32	TNFRSF1A (ENSCWAG00000019019) #33	PLEKHG6 (ENSCWAG00000018796) #34	CD9 (ENSCWAG00000018715) #35	VWF (ENSCWAG00000018464) #36	ANO2 (ENSCWAG00000018045)	NTF3 (ENSCWAG00000018000)
Pig	MODERN SPECIES	13	GNB3 (ENSSSCG00000000682)	P3H3 (ENSSSCG00000000681) #7	GPR162 (ENSSSCG00000000680) #8	CD4 (ENSSSCG00000000687) #9	LAG3 (ENSSSCG00000000688) #10	ENSSSCG00000022176 #11	MLF2 (ENSSSCG00000000690) #12	COPS7A (ENSSSCG00000000691) #13	ENSSSCG00000058867	PIANP (ENSSSCG00000000692) #14	ZNF384 (ENSSSCG00000000702) #15	ING4 (ENSSSCG00000044078) #17	ACRBP (ENSSSCG00000000700) #18	LPAR5 (ENSSSCG00000000699) #20	CHD4 (ENSSSCG00000000697) #21	NOP2 (ENSSSCG00000000696) #22	IFFO1 (ENSSSCG00000000695) #23	GAPDH (ENSSSCG00000000694) #24	NCAPD2 (ENSSSCG00000000693) #26	MRPL51 (ENSSSCG00000039662) #27	ENSSSCG00000000703 #28	TAPBPL (ENSSSCG00000000704) #29	CD27 (ENSSSCG00000063084) #30	LTBR (ENSSSCG00000000706) #31	SCNN1A (ENSSSCG00000000707) #32	TNFRSF1A (ENSSSCG00000000708) #33	PLEKHG6 (ENSSSCG00000000709) #34	CD9 (ENSSSCG00000022230) #35	VWF (ENSSSCG00000000712) #36	NTF3 (ENSSSCG00000033544)	KCNA5 (ENSSSCG00000056277)
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Cetacea	ANCESTRAL SPECIES	8	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821.g #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821.g #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821.g #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821.g #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821.g #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Beluga whale	MODERN SPECIES	23	ENSDLEG00000015607	ENSDLEG00000015552	ENSDLEG00000015588	P3H3 (ENSDLEG00000015481) #7	GPR162 (ENSDLEG00000015459) #8	CD4 (ENSDLEG00000015440) #9	LAG3 (ENSDLEG00000015366) #10	MLF2 (ENSDLEG00000015348) #12	COPS7A (ENSDLEG00000015324) #13	PIANP (ENSDLEG00000015302) #14	ZNF384 (ENSDLEG00000015249) #15	ING4 (ENSDLEG00000015223) #17	ENSDLEG00000015216 #18	LPAR5 (ENSDLEG00000015210) #20	CHD4 (ENSDLEG00000015142) #21	NOP2 (ENSDLEG00000015109) #22	IFFO1 (ENSDLEG00000015074) #23	GAPDH (ENSDLEG00000015049) #24	NCAPD2 (ENSDLEG00000014985) #26	MRPL51 (ENSDLEG00000014972) #27	VAMP1 (ENSDLEG00000014958) #28	TAPBPL (ENSDLEG00000014928) #29	CD27 (ENSDLEG00000014916) #30	LTBR (ENSDLEG00000014872) #31	SCNN1A (ENSDLEG00000014848) #32	TNFRSF1A (ENSDLEG00000014826) #33	PLEKHG6 (ENSDLEG00000014777) #34	CD9 (ENSDLEG00000014732) #35	VWF (ENSDLEG00000007022) #36	ENSDLEG00000006754	ANO2 (ENSDLEG00000006729)
Narwhal	MODERN SPECIES	313	USP5 (ENSMMNG00015015510)	CDCA3 (ENSMMNG00015015481)	GNB3 (ENSMMNG00015015448)	P3H3 (ENSMMNG00015015434) #7	GPR162 (ENSMMNG00015015414) #8	CD4 (ENSMMNG00015015391) #9	LAG3 (ENSMMNG00015015366) #10	PTMS (ENSMMNG00015015353) #11	MLF2 (ENSMMNG00015015337) #12	COPS7A (ENSMMNG00015015318) #13	PIANP (ENSMMNG00015015305) #14	ZNF384 (ENSMMNG00015015269) #15	ING4 (ENSMMNG00015015173) #17	ACRBP (ENSMMNG00015015110) #18	CHD4 (ENSMMNG00015015036) #21	NOP2 (ENSMMNG00015014983) #22	IFFO1 (ENSMMNG00015014957) #23	GAPDH (ENSMMNG00015014916) ##24	NCAPD2 (ENSMMNG00015014856) #26	MRPL51 (ENSMMNG00015014780) #27	VAMP1 (ENSMMNG00015014734) #28	TAPBPL (ENSMMNG00015014697) #29	CD27 (ENSMMNG00015014673) #30	LTBR (ENSMMNG00015014642) #31	SCNN1A (ENSMMNG00015014598) #32	TNFRSF1A (ENSMMNG00015014562) #33	PLEKHG6 (ENSMMNG00015014516) #34	CD9 (ENSMMNG00015014479) #35	VWF (ENSMMNG00015014423) #36	ANO2 (ENSMMNG00015014305)	NTF3 (ENSMMNG00015014262)
Vaquita	MODERN SPECIES	1	ENSPSNG00000005389	GNB3 (ENSPSNG00000005442)	P3H3 (ENSPSNG00000005493) #7	GPR162 (ENSPSNG00000005573) #8	CD4 (ENSPSNG00000005617) #9	LAG3 (ENSPSNG00000005663) #10	PTMS (ENSPSNG00000005689) #11	MLF2 (ENSPSNG00000005707) #12	COPS7A (ENSPSNG00000005746) #13	PIANP (ENSPSNG00000005778) #14	ZNF384 (ENSPSNG00000005851) #15	ING4 (ENSPSNG00000005989) #17	ACRBP (ENSPSNG00000006101) #18	LPAR5 (ENSPSNG00000006141) #20	CHD4 (ENSPSNG00000006181) #21	NOP2 (ENSPSNG00000006400) #22	IFFO1 (ENSPSNG00000006501) #23	GAPDH (ENSPSNG00000006718) #24	NCAPD2 (ENSPSNG00000006782) #26	MRPL51 (ENSPSNG00000006911) #27	VAMP1 (ENSPSNG00000006961) #28	TAPBPL (ENSPSNG00000007018) #29	CD27 (ENSPSNG00000007050) #30	LTBR (ENSPSNG00000007107) #31	SCNN1A (ENSPSNG00000007201) #32	TNFRSF1A (ENSPSNG00000007444) #33	PLEKHG6 (ENSPSNG00000007509) #34	CD9 (ENSPSNG00000007840) #35	VWF (ENSPSNG00000007898) #36	ANO2 (ENSPSNG00000008259)	NTF3 (ENSPSNG00000008822)
Dolphin	MODERN SPECIES	3421															CHD4 (ENSTTRG00000016102) #21	NOP2 (ENSTTRG00000016100) #22	IFFO1 (ENSTTRG00000016097) #23	GAPDH (ENSTTRG00000016094) #24	NCAPD2 (ENSTTRG00000016088) #26	MRPL51 (ENSTTRG00000016086) #27
Sperm whale	MODERN SPECIES	151											ENSPCTG00005019803 #15	ING4 (ENSPCTG00005019618) #17	ACRBP (ENSPCTG00005019434) #18	LPAR5 (ENSPCTG00005019413) #20	CHD4 (ENSPCTG00005015922) #21	NOP2 (ENSPCTG00005015086) #22	IFFO1 (ENSPCTG00005014549) #23	GAPDH (ENSPCTG00005014498) #24
Blue whale	MODERN SPECIES	1	GNB3 (ENSBMSG00010015104)	P3H3 (ENSBMSG00010015046) #7	GPR162 (ENSBMSG00010014987) #8	CD4 (ENSBMSG00010014905) #9	LAG3 (ENSBMSG00010014753) #10	PTMS (ENSBMSG00010014712) #11	MLF2 (ENSBMSG00010014597) #12	COPS7A (ENSBMSG00010014553) #13	PIANP (ENSBMSG00010014495) #14	ZNF384 (ENSBMSG00010014353) #15	ING4 (ENSBMSG00010014218) #17	ACRBP (ENSBMSG00010014002) #18	LPAR5 (ENSBMSG00010013959) #20	CHD4 (ENSBMSG00010013201) #21	ENSBMSG00010013094	ENSBMSG00010013081 #22	IFFO1 (ENSBMSG00010012925) #23	GAPDH (ENSBMSG00010012883) #24	ENSBMSG00010012842 #27	VAMP1 (ENSBMSG00010012768) #28	TAPBPL (ENSBMSG00010012737) #29	CD27 (ENSBMSG00010012719) #30	LTBR (ENSBMSG00010012695) #31	SCNN1A (ENSBMSG00010012651) #32	TNFRSF1A (ENSBMSG00010012591) #33	PLEKHG6 (ENSBMSG00010012458) #34	CD9 (ENSBMSG00010012380) #35	VWF (ENSBMSG00010012312) #36	ANO2 (ENSBMSG00010012182)	NTF3 (ENSBMSG00010012141)	KCNA5 (ENSBMSG00010012135)
Pecora	ANCESTRAL SPECIES	3	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00910000146741	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C
Percora_a	ANCESTRAL SPECIES	3	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Bovidae	ANCESTRAL SPECIES	3	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Bovinae	ANCESTRAL SPECIES	10	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033.c.a #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Bos	ANCESTRAL SPECIES	2	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033.c.a #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Bos_b	ANCESTRAL SPECIES	30	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033.c.a #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000154384.h.a	ENSGT00940000155840.C
Cow	MODERN SPECIES	24	GNB3 (ENSBTAG00000016043)	P3H3 (ENSBTAG00000003598) #7	GPR162 (ENSBTAG00000034385) #8	CD4 (ENSBTAG00000003255) #9	ENSBTAG00000051680	LAG3 (ENSBTAG00000034295) #10	PTMS (ENSBTAG00000018451)	MLF2 (ENSBTAG00000014931) #12	COPS7A (ENSBTAG00000011111) #13	PIANP (ENSBTAG00000001099) #14	ZNF384 (ENSBTAG00000017072) #15	ING4 (ENSBTAG00000017064) #17	ACRBP (ENSBTAG00000034246) #18	LPAR5 (ENSBTAG00000004541) #20	CHD4 (ENSBTAG00000014734) #21	NOP2 (ENSBTAG00000014733) #22	IFFO1 (ENSBTAG00000030369) #23	GAPDH (ENSBTAG00000014731) ##24	NCAPD2 (ENSBTAG00000014730) #26	MRPL51 (ENSBTAG00000014729) #27	VAMP1 (ENSBTAG00000014603) #28	TAPBPL (ENSBTAG00000014728) #29	CD27 (ENSBTAG00000014725) #30	LTBR (ENSBTAG00000015312) #31	SCNN1A (ENSBTAG00000002631) #32	TNFRSF1A (ENSBTAG00000004211) #33	PLEKHG6 (ENSBTAG00000004208) #34	CD9 (ENSBTAG00000014764) #35	VWF (ENSBTAG00000012265) #36	ENSBTAG00000011758	ANO2 (ENSBTAG00000012246)
Hybrid Bos Indicus	MODERN SPECIES	24	P3H3 (ENSBIXG00005019389) #7	GPR162 (ENSBIXG00005003161) #8	CD4 (ENSBIXG00005019448) #9	LAG3 (ENSBIXG00005019525) #10	PTMS (ENSBIXG00005019569) #11	MLF2 (ENSBIXG00005019632) #12	ENSBIXG00005019647	COPS7A (ENSBIXG00005019728) #13	ENSBIXG00005003230	PIANP (ENSBIXG00005003237) #14	ZNF384 (ENSBIXG00005019825) #15	ING4 (ENSBIXG00005019901) #17	ACRBP (ENSBIXG00005019947) #18	LPAR5 (ENSBIXG00005019955) #20	CHD4 (ENSBIXG00005020206) #21	NOP2 (ENSBIXG00005020264) #22	IFFO1 (ENSBIXG00005003425) #23	GAPDH (ENSBIXG00005020359) #24	NCAPD2 (ENSBIXG00005020400) #26	MRPL51 (ENSBIXG00005006150) #27	ENSBIXG00005003464 #28	TAPBPL (ENSBIXG00005003468) #29	CD27 (ENSBIXG00005020535) #30	LTBR (ENSBIXG00005005674) #31	SCNN1A (ENSBIXG00005003494) #32	TNFRSF1A (ENSBIXG00005020704) #33	PLEKHG6 (ENSBIXG00005020777) #34	CD9 (ENSBIXG00005003523) #35	VWF (ENSBIXG00005020874) #36	ENSBIXG00005020908	ANO2 (ENSBIXG00005021270)
Bos_a	ANCESTRAL SPECIES	24	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033.c.a #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Wild yak	MODERN SPECIES	2103	CDCA3 (ENSBMUG00000009485)	GNB3 (ENSBMUG00000009430)	P3H3 (ENSBMUG00000009413) #7	ENSBMUG00000009392 #8	CD4 (ENSBMUG00000009372) #9	LAG3 (ENSBMUG00000009333) #10	ENSBMUG00000009305	MLF2 (ENSBMUG00000009291) #12	COPS7A (ENSBMUG00000009260) #13	PIANP (ENSBMUG00000009210) #14	ZNF384 (ENSBMUG00000009149) #15	ENSBMUG00000009099 #17	ACRBP (ENSBMUG00000009077) #18	LPAR5 (ENSBMUG00000009068) #20	CHD4 (ENSBMUG00000008731) #21	NOP2 (ENSBMUG00000008536) #22	IFFO1 (ENSBMUG00000008419) #23	ENSBMUG00000007065 #24	NCAPD2 (ENSBMUG00000006625) #26	MRPL51 (ENSBMUG00000006603) #27	ENSBMUG00000006576 #28	TAPBPL (ENSBMUG00000006543) #29	CD27 (ENSBMUG00000006538) #30	LTBR (ENSBMUG00000006531) #31	SCNN1A (ENSBMUG00000006521) #32	TNFRSF1A (ENSBMUG00000006501) #33	PLEKHG6 (ENSBMUG00000006422) #34	CD9 (ENSBMUG00000006345) #35
Domestic yak	MODERN SPECIES	24	CDCA3 (ENSBGRG00000022253)	GNB3 (ENSBGRG00000022348)	P3H3 (ENSBGRG00000022465) #7	GPR162 (ENSBGRG00000022613) #8	CD4 (ENSBGRG00000000298) #9	LAG 3 (ENSBGRG00000000330) #10	PTMS (ENSBGRG00000000358) #11	MLF2 (ENSBGRG00000000386) #12	COPS7A (ENSBGRG00000000425) #13	PIANP (ENSBGRG00000000449) #14	ZNF384 (ENSBGRG00000000467) #15	ENSBGRG00000000548 #17	ACRBP (ENSBGRG00000000596) #18	LPAR5 (ENSBGRG00000000647) #20	CHD4 (ENSBGRG00000000684) #21	NOP2 (ENSBGRG00000000846) #22	IFFO1 (ENSBGRG00000000872) #23	ENSBGRG00000001026 #23	ENSBGRG00000001042 #24	MRPL51 (ENSBGRG00000001145) #27	VAMP1 (ENSBGRG00000001169) #28	ENSBGRG00000001236 #29	CD27 (ENSBGRG00000001262) #30	LTBR (ENSBGRG00000001281) #31	ENSBGRG00000001292	SCNN1A (ENSBGRG00000001315) #32	TNFRSF1A (ENSBGRG00000001449) #33	PLEKHG6 (ENSBGRG00000001519) #34	CD9 (ENSBGRG00000001613) #35	VWF (ENSBGRG00000002102) #36	ANO2 (ENSBGRG00000010076)
American bison	MODERN SPECIES	3130	GNB3 (ENSBBBG00000001619)	P3H3 (ENSBBBG00000013282) #7	ENSBBBG00000002685 #8	CD4 (ENSBBBG00000013265) #9	LAG3 (ENSBBBG00000001644) #10	PTMS (ENSBBBG00000013194) #11	MLF2 (ENSBBBG00000013185) #12	ENSBBBG00000013172	ENSBBBG00000013164 #13	PIANP (ENSBBBG00000008904) #14	ZNF384 (ENSBBBG00000013145) #15	ENSBBBG00000013090 #17	ACRBP (ENSBBBG00000013082) #18	LPAR5 (ENSBBBG00000013073) #20	CHD4 (ENSBBBG00000013055) #21	NOP2 (ENSBBBG00000012839) #22	IFFO1 (ENSBBBG00000002480) #23	GAPDH (ENSBBBG00000012745) #24	NCAPD2 (ENSBBBG00000012598) #26	MRPL51 (ENSBBBG00000012567) #27	VAMP1 (ENSBBBG00000012550) #28	ENSBBBG00000002403 #29	CD27 (ENSBBBG00000009087) #30	LTBR (ENSBBBG00000002397) #31	SCNN1A (ENSBBBG00000012488) #32	ENSBBBG00000012468 #33	PLEKHG6 (ENSBBBG00000012442) #34	CD9 (ENSBBBG00000002367) #35	VWF (ENSBBBG00000012369) #36	ANO2 (ENSBBBG00000012336)	ENSBBBG00000007400
Caprinae	ANCESTRAL SPECIES		ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q.a #24	ENSGT00580000082664.a.a	ENSGT00940000153298.n.q.b #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00440000038159.rb.b
Goat	MODERN SPECIES	24	USP5 (ENSCHIG00000012356)	CDCA3 (ENSCHIG00000013074)	GNB3 (ENSCHIG00000012696)	P3H3 (ENSCHIG00000000989) #7	GPR162 (ENSCHIG00000019485) #8	CD4 (ENSCHIG00000010446) #9	LAG3 (ENSCHIG00000012648) #10	MLF2 (ENSCHIG00000014233) #12	COPS7A (ENSCHIG00000013096) #13	PIANP (ENSCHIG00000017399) #14	ZNF384 (ENSCHIG00000012248) #15	ING4 (ENSCHIG00000025231) #17	ACRBP (ENSCHIG00000011452) #18	LPAR5 (ENSCHIG00000004907) #20	CHD4 (ENSCHIG00000020766) #21	NOP2 (ENSCHIG00000018560) #22	IFFO1 (ENSCHIG00000019031) #23	ENSCHIG00000022516 #24	NCAPD2 (ENSCHIG00000015626) #26	MRPL51 (ENSCHIG00000011385) #27	VAMP1 (ENSCHIG00000014523) #28	TAPBPL (ENSCHIG00000016665) #29	CD27 (ENSCHIG00000021715) #30	LTBR (ENSCHIG00000022975) #31	SCNN1A (ENSCHIG00000009435) #32	TNFRSF1A (ENSCHIG00000012735) #33	PLEKHG6 (ENSCHIG00000013835) #34	CD9 (ENSCHIG00000008887) #35	ENSCHIG00000007426	VWF (ENSCHIG00000012979) #36	ANO2 (ENSCHIG00000016148)
Rambouillet Sheep	MODERN SPECIES	19	CDCA3 (ENSOARG00020023351)	GNB3 (ENSOARG00020023409)	P3H3 (ENSOARG00020023431) #7	GPR162 (ENSOARG00020004446) #8	CD4 (ENSOARG00020004460) #9	LAG3 (ENSOARG00020004514) #10	PTMS (ENSOARG00020004551) #11	MLF2 (ENSOARG00020004578) #12	COPS7A (ENSOARG00020004603) #13	PIANP (ENSOARG00020004619) #14	ZNF384 (ENSOARG00020004680) #15	ING4 (ENSOARG00020004785) #17	ACRBP (ENSOARG00020004837) #18	LPAR5 (ENSOARG00020004931) #20	CHD4 (ENSOARG00020004976) #21	NOP2 (ENSOARG00020005339) #22	IFFO1 (ENSOARG00020005394) #23	ENSOARG00020005655 #24	NCAPD2 (ENSOARG00020005706) #26	MRPL51 (ENSOARG00020005788) #27	VAMP1 (ENSOARG00020005818) #28	ENSOARG00020005857 #29	CD27 (ENSOARG00020005885) #30	LTBR (ENSOARG00020005918) #31	SCNN1A (ENSOARG00020006047) #32	TNFRSF1A (ENSOARG00020006166) #33	PLEKHG6 (ENSOARG00020006252) #34	CD9 (ENSOARG00020006407) #35	ENSOARG00020006562	VWF (ENSOARG00020006721) #36	ANO2 (ENSOARG00020008165)
Siberian musk deer	MODERN SPECIES	1247	CDCA3 (ENSMMSG00000021980)	GNB3 (ENSMMSG00000021946)	P3H3 (ENSMMSG00000021912) #7	GPR162 (ENSMMSG00000021887) #8	CD4 (ENSMMSG00000021846) #9	LAG3 (ENSMMSG00000021775) #10	PTMS (ENSMMSG00000021756) #11	MLF2 (ENSMMSG00000021729) #12	COPS7A (ENSMMSG00000021708) #13	PIANP (ENSMMSG00000021673) #14	ZNF384 (ENSMMSG00000021579) #15	ING4 (ENSMMSG00000021540) #17	ACRBP (ENSMMSG00000021440) #18	LPAR5 (ENSMMSG00000021424) #20	CHD4 (ENSMMSG00000020011) #21	NOP2 (ENSMMSG00000019764) #22	IFFO1 (ENSMMSG00000019638) #23	ENSMMSG00000019587 #24	NCAPD2 (ENSMMSG00000019414) #26	ENSMMSG00000019365 #27	VAMP1 (ENSMMSG00000019324) #28	TAPBPL (ENSMMSG00000019259) #29	CD27 (ENSMMSG00000019226) #30	LTBR (ENSMMSG00000019158) #31	SCNN1A (ENSMMSG00000019053) #32	TNFRSF1A (ENSMMSG00000018960) #33	PLEKHG6 (ENSMMSG00000018872) #34	CD9 (ENSMMSG00000018829) #35	VWF (ENSMMSG00000018577) #36	ANO2 (ENSMMSG00000018256)	NTF3 (ENSMMSG00000018211)
Yarkand deer	MODERN SPECIES	14	CDCA3 (ENSCHYG00000024020)	GNB3 (ENSCHYG00000024150)	P3H3 (ENSCHYG00000024241) #7	GPR162 (ENSCHYG00000024446) #8	CD4 (ENSCHYG00000024477) #9	LAG3 (ENSCHYG00000024522) #10	ENSCHYG00000024584	MLF2 (ENSCHYG00000024596) #12	COPS7A (ENSCHYG00000024633) #13	PIANP (ENSCHYG00000024684) #14	ZNF384 (ENSCHYG00000024746) #15	ING4 (ENSCHYG00000024855) #17	ACRBP (ENSCHYG00000024938) #18	LPAR5 (ENSCHYG00000024995) #20	CHD4 (ENSCHYG00000025019) #21	NOP2 (ENSCHYG00000025184) #22	IFFO1 (ENSCHYG00000025348) #23	ENSCHYG00000025387 #24	NCAPD2 (ENSCHYG00000025563) #26	MRPL51 (ENSCHYG00000025676) #27	ENSCHYG00000025696	ENSCHYG00000025715 #28	TAPBPL (ENSCHYG00000025766) #29	ENSCHYG00000025783	CD27 (ENSCHYG00000025790) #30	LTBR (ENSCHYG00000025819) #31	SCNN1A (ENSCHYG00000025885) #32	TNFRSF1A (ENSCHYG00000025998) #33	PLEKHG6 (ENSCHYG00000026050) #34	CD9 (ENSCHYG00000026113) #35	VWF (ENSCHYG00000026172) #36
Camelidae	ANCESTRAL SPECIES	17	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n.q #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Arabian camel	MODERN SPECIES	27	CDCA3 (ENSCDRG00005019067)	GNB3 (ENSCDRG00005019041)	P3H3 (ENSCDRG00005018977) #7	GPR162 (ENSCDRG00005018926) #8	CD4 (ENSCDRG00005018894) #9	LAG3 (ENSCDRG00005018858) #10	PTMS (ENSCDRG00005018819) #11	MLF2 (ENSCDRG00005018784) #12	COPS7A (ENSCDRG00005018742) #13	PIANP (ENSCDRG00005018699) #14	ZNF384 (ENSCDRG00005018592) #15	ING4 (ENSCDRG00005018381) #17	ACRBP (ENSCDRG00005018263) #18	LPAR5 (ENSCDRG00005018243) #20	CHD4 (ENSCDRG00005012738) #21	NOP2 (ENSCDRG00005012504) #22	IFFO1 (ENSCDRG00005011863) #23	GAPDH (ENSCDRG00005011757) #24	NCAPD2 (ENSCDRG00005011412) #26	MRPL51 (ENSCDRG00005011359) #27	VAMP1 (ENSCDRG00005011313) #28	TAPBPL (ENSCDRG00005011181) #29	ENSCDRG00005011099 #30	ENSCDRG00005011060 #31	ENSCDRG00005011011 #31	SCNN1A (ENSCDRG00005010881) #32	TNFRSF1A (ENSCDRG00005010816) #33	PLEKHG6 (ENSCDRG00005010653) #34	CD9 (ENSCDRG00005010377) #35	VWF (ENSCDRG00005009803) #36	ANO2 (ENSCDRG00005009195)
Eulipotyphla	ANCESTRAL SPECIES	186															ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.b ##24	ENSGT00940000153566.a #26
Common shrew	MODERN SPECIES	884																ENSSARG00000004520 #22
Hedgehog	MODERN SPECIES	490															ENSEEUG00000011777 #21	NOP2 (ENSEEUG00000011692) #22	IFFO1 (ENSEEUG00000011508) #23	GAPDH (ENSEEUG00000011444) ##24	ENSEEUG00000011280 #26
Atlantogenata	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Xenarthra	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01030000234816 #11	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00390000007725.A.a	ENSGT00940000161860
Armadillo	MODERN SPECIES	508	CDCA3 (ENSDNOG00000044971)	GNB3 (ENSDNOG00000036546)	P3H3 (ENSDNOG00000036097) #7	GPR162 (ENSDNOG00000039746) #8	CD4 (ENSDNOG00000002205) #9	LAG3 (ENSDNOG00000002426) #10	PTMS (ENSDNOG00000024120) #11	ENSDNOG00000000758 #12	COPS7A (ENSDNOG00000001998) #13	PIANP (ENSDNOG00000037888) #14	ZNF384 (ENSDNOG00000003936) #15	ING4 (ENSDNOG00000041413) #17	ACRBP (ENSDNOG00000042457) #18	LPAR5 (ENSDNOG00000045302) #20	CHD4 (ENSDNOG00000001134) #21	NOP2 (ENSDNOG00000001133) #22	IFFO1 (ENSDNOG00000036248) #23	ENSDNOG00000038191 ##24	NCAPD2 (ENSDNOG00000001128) #26	MRPL51 (ENSDNOG00000001127) #27	VAMP1 (ENSDNOG00000001131) #28	TAPBPL (ENSDNOG00000035668) #29	CD27 (ENSDNOG00000035400) #30	LTBR (ENSDNOG00000047421) #31	SCNN1A (ENSDNOG00000036126) #32	TNFRSF1A (ENSDNOG00000006656) #33	PLEKHG6 (ENSDNOG00000006637) #34	CD9 (ENSDNOG00000006191) #35	ENSDNOG00000035788 #36
Afrotheria	ANCESTRAL SPECIES	11	ENSGT00940000156036	ENSGT00390000017343.a	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Afrotheria_a	ANCESTRAL SPECIES	11	ENSGT00940000156036	ENSGT00390000017343.a	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.n #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160453 #29	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Elephant	MODERN SPECIES	108	USP5 (ENSLAFG00000006569)	ENSLAFG00000006567	GNB3 (ENSLAFG00000006559)	P3H3 (ENSLAFG00000006551) #7	GPR162 (ENSLAFG00000022632) #8	CD4 (ENSLAFG00000029166) #9	LAG3 (ENSLAFG00000032271) #10	MLF2 (ENSLAFG00000013649) #12	COPS7A (ENSLAFG00000004634) #13	PIANP (ENSLAFG00000025728) #14	ZNF384 (ENSLAFG00000008381) #15	ING4 (ENSLAFG00000008379) #17	ACRBP (ENSLAFG00000008377) #18	LPAR5 (ENSLAFG00000022468) #20	CHD4 (ENSLAFG00000022842) #21	NOP2 (ENSLAFG00000002784) #22	IFFO1 (ENSLAFG00000002782) #23	ENSLAFG00000002780 #24	NCAPD2 (ENSLAFG00000016117) #26	MRPL51 (ENSLAFG00000002106) #27	VAMP1 (ENSLAFG00000002104) #28	TAPBPL (ENSLAFG00000016109) #29	CD27 (ENSLAFG00000021608) #30	LTBR (ENSLAFG00000029559) #31	SCNN1A (ENSLAFG00000000723) #32	TNFRSF1A (ENSLAFG00000017153) #33	PLEKHG6 (ENSLAFG00000021440) #34	CD9 (ENSLAFG00000027050) #35	VWF (ENSLAFG00000002327) #36	ANO2 (ENSLAFG00000002320)	NTF3 (ENSLAFG00000002319)
Hyrax	MODERN SPECIES	212															CHD4 (ENSPCAG00000007120) #21	NOP2 (ENSPCAG00000007033) #22	IFFO1 (ENSPCAG00000006972) #23	GAPDH (ENSPCAG00000006928) #24	NCAPD2 (ENSPCAG00000006779) #26
Tenrec	MODERN SPECIES	1332														LPAR5 (ENSETEG00000005915) #20	CHD4 (ENSETEG00000005912) #21	NOP2 (ENSETEG00000005909) #22
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000156036	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.b ##24	ENSGT00940000153298.m.b.a.a.g ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01050000246306	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.b ##24	ENSGT00940000153298.m.b.a.a.g ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a
Diprotodontia	ANCESTRAL SPECIES	16	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01050000246306	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.g ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860
Diprotodontia_a	ANCESTRAL SPECIES	18	ENSGT00390000017343.q	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT01050000246306	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.g ##24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00510000049297 #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b.e #35	ENSGT00940000155810 #36	ENSGT00940000155840.C	ENSGT00390000007725.A.a	ENSGT00940000161860
koala	MODERN SPECIES	56	USP5 (ENSPCIG00000002410)	GNB3 (ENSPCIG00000002089)	P3H3 (ENSPCIG00000002057) #7	GPR162 (ENSPCIG00000034794) #8	ENSPCIG00000002019 #9	ENSPCIG00000002003 #10	ENSPCIG00000032253	MLF2 (ENSPCIG00000001988) #12	COPS7A (ENSPCIG00000001977) #13	PIANP (ENSPCIG00000001968) #14	ZNF384 (ENSPCIG00000001942) #15	ING4 (ENSPCIG00000001929) #17	ENSPCIG00000001915 #18	LPAR5 (ENSPCIG00000001908) #20	CHD4 (ENSPCIG00000001846) #21	NOP2 (ENSPCIG00000001788) #22	ENSPCIG00000033646 #23	ENSPCIG00000008527 ##24	NCAPD2 (ENSPCIG00000013026) #26	MRPL51 (ENSPCIG00000013024) #27	VAMP1 (ENSPCIG00000001751) #28	ENSPCIG00000001727 #30	ENSPCIG00000036806	ENSPCIG00000001193 #32	ENSPCIG00000001174 #33	PLEKHG6 (ENSPCIG00000033584) #34	ENSPCIG00000011779 #35	VWF (ENSPCIG00000011924) #36	ANO2 (ENSPCIG00000031141)	NTF3 (ENSPCIG00000023966)	GDF3 (ENSPCIG00000023971)
Common wonbat	MODERN SPECIES	1112	ENSVURG00010001810	GNB3 (ENSVURG00010001792)	P3H3 (ENSVURG00010001768) #7	GPR162 (ENSVURG00010001748) #8	ENSVURG00010001730 #9	ENSVURG00010001711 #10	ENSVURG00010001702	MLF2 (ENSVURG00010001688) #12	COPS7A (ENSVURG00010001667) #13	PIANP (ENSVURG00010001647) #14	ZNF384 (ENSVURG00010001621) #15	ING4 (ENSVURG00010001569) #17	ENSVURG00010001533 #18	LPAR5 (ENSVURG00010001516) #20	CHD4 (ENSVURG00010000831) #21	NOP2 (ENSVURG00010000599) #22	IFFO1 (ENSVURG00010000540) #23
Wallaby	MODERN SPECIES	1054															CHD4 (ENSMEUG00000015294) #21	NOP2 (ENSMEUG00000015287) #22	IFFO1 (ENSMEUG00000015279) #23	GAPDH (ENSMEUG00000015273) ##24	NCAPD2 (ENSMEUG00000015256) #26	MRPL51 (ENSMEUG00000015252) #27	VAMP1 (ENSMEUG00000015246) #28	ENSMEUG00000015238 #30	ENSMEUG00000015225 #29
Opossum	MODERN SPECIES	7	USP5 (ENSMODG00000018148)	ENSMODG00000018146	GNB3 (ENSMODG00000018145)	P3H3 (ENSMODG00000018141) #7	GPR162 (ENSMODG00000040272) #8	CD4 (ENSMODG00000027359) #9	ENSMODG00000018136 #10	MLF2 (ENSMODG00000018113) #12	COPS7A (ENSMODG00000018110) #13	PIANP (ENSMODG00000018107) #14	ZNF384 (ENSMODG00000018105) #15	ING4 (ENSMODG00000018103) #17	ENSMODG00000018101 #18	LPAR5 (ENSMODG00000018099) #20	CHD4 (ENSMODG00000018094) #21	NOP2 (ENSMODG00000018077) #22	ENSMODG00000018067 #23	ENSMODG00000018066 ##24	NCAPD2 (ENSMODG00000018064) #26	MRPL51 (ENSMODG00000018063) #27	ENSMODG00000018060 #30	LTBR (ENSMODG00000018059) #31	ENSMODG00000048629 #32	ENSMODG00000037213 #32	ENSMODG00000018056 #33	PLEKHG6 (ENSMODG00000018054) #34	ENSMODG00000018053 #35	ANO2 (ENSMODG00000018017)	NTF3 (ENSMODG00000018011)	KCNA5 (ENSMODG00000024849)	KCNA1 (ENSMODG00000024850)
Platypus	MODERN SPECIES	87	TPI1 (ENSOANG00000042133)	USP5 (ENSOANG00000040189)	ENSOANG00000042014	GNB3 (ENSOANG00000009941)	P3H3 (ENSOANG00000041812) #7	GPR162 (ENSOANG00000035991) #8	PTMS (ENSOANG00000045022) #11	MLF2 (ENSOANG00000003857) #12	COPS7A (ENSOANG00000003858) #13	PIANP (ENSOANG00000037079) #14	ZNF384 (ENSOANG00000040010) #15	ING4 (ENSOANG00000036657) #17	ENSOANG00000037768 #18	LPAR5 (ENSOANG00000050733) #20	CHD4 (ENSOANG00000015700) #21	NOP2 (ENSOANG00000047605) #22	ENSOANG00000043432 #23	NCAPD2 (ENSOANG00000003013) #26	MRPL51 (ENSOANG00000003012) #27	ENSOANG00000038559 #28	ENSOANG00000007602 #29	ENSOANG00000039739 #31	SCNN1A (ENSOANG00000001688) #32	ENSOANG00000044825 #33	ENSOANG00000038811 #34	CD9 (ENSOANG00000048710) #35	GAPDH (ENSOANG00000004492) #24	VWF (ENSOANG00000040443) #36	ANO2 (ENSOANG00000036505)	NTF3 (ENSOANG00000001146)	KCNA5 (ENSOANG00000044609)
Sauria	ANCESTRAL SPECIES	49	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00990000212708	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00940000180930	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32
Lepidosauria	ANCESTRAL SPECIES	65	ENSGT00940000168539	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00940000168928	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00990000212708	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00940000180930	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000153255	ENSGT01090000260044.D.i	ENSGT00440000033697	ENSGT00940000168148	ENSGT00940000156657	ENSGT00940000157383	ENSGT00950000183106.a.b	ENSGT00940000171511
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000168539	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00990000211157	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00990000212708	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000153255	ENSGT01090000260044.D.i.a.a	ENSGT01100000263477.C	ENSGT00440000033697	ENSGT00940000168148	ENSGT00940000156657	ENSGT00940000157383	ENSGT00950000183106.a.b	ENSGT00940000154273.a
Laterata	ANCESTRAL SPECIES	7	ENSGT00940000168539	ENSGT01000000214413.b.a.b.a.d	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00990000211157	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00990000212708	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT01090000260044.D.i.a.a	ENSGT01100000263477.C	ENSGT00440000033697	ENSGT00940000168148	ENSGT00940000156657	ENSGT00940000157383	ENSGT00950000183106.a.b	ENSGT00940000154273.a	ENSGT00940000160920
Common wall lizard	MODERN SPECIES	8	ENSPMRG00000018312	LAG3 (ENSPMRG00000018333) #10	MLF2 (ENSPMRG00000018362) #12	ENSPMRG00000018406	COPS7A (ENSPMRG00000018410) #13	PIANP (ENSPMRG00000018419) #14	ZNF384 (ENSPMRG00000018429) #15	ENSPMRG00000018449	ING4 (ENSPMRG00000018462) #17	ENSPMRG00000018471	ENSPMRG00000018478	LPAR5 (ENSPMRG00000018488) #20	ENSPMRG00000018490	CHD4 (ENSPMRG00000018512) #21	GAPDH (ENSPMRG00000018588) #24	NOP2 (ENSPMRG00000018604) #22	IFFO1 (ENSPMRG00000018615) #23	NCAPD2 (ENSPMRG00000018629) #26	SCNN1A (ENSPMRG00000018663) #32	ENSPMRG00000018676	ENSPMRG00000018681	ENSPMRG00000020812	ENSPMRG00000020822	ENSPMRG00000020830	ENSPMRG00000020838	ENSPMRG00000020843	ENSPMRG00000020848	ENSPMRG00000020851	ENSPMRG00000020856	ENSPMRG00000020861	ENSPMRG00000020865
Argentine black and white tegu	MODERN SPECIES	45	GNB3 (ENSSMRG00000019120)	P3H3 (ENSSMRG00000019119) #7	GPR162 (ENSSMRG00000019118) #8	ENSSMRG00000019114	ENSSMRG00000019113	MLF2 (ENSSMRG00000019112) #12	ENSSMRG00000019111	COPS7A (ENSSMRG00000019110) #13	PIANP (ENSSMRG00000019109) #14	ZNF384 (ENSSMRG00000019107) #15	ING4 (ENSSMRG00000019106) #17	ENSSMRG00000019105 #18	ENSSMRG00000019103	LPAR5 (ENSSMRG00000019102) #20	CHD4 (ENSSMRG00000011880) #21	NOP2 (ENSSMRG00000011771) #22	IFFO1 (ENSSMRG00000011735) #23	GAPDH (ENSSMRG00000011286) #24	NCAPD2 (ENSSMRG00000011275) #26	MRPL51 (ENSSMRG00000011274) #27	VAMP1 (ENSSMRG00000011272) #28	SCNN1A (ENSSMRG00000011262) #32	ENSSMRG00000011255	DUSP12 (ENSSMRG00000011206)	ENSSMRG00000011202	ADGRL3 (ENSSMRG00000011162)	SYCE3 (ENSSMRG00000011083)	STYK1 (ENSSMRG00000011080)	FBXO40 (ENSSMRG00000011079)	KPNA1 (ENSSMRG00000011078)	FAM162A (ENSSMRG00000011077)
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000159748	ENSGT01030000236833	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00990000211157	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000153255	ENSGT01090000260044.D.i.a.a	ENSGT01100000263477.C	ENSGT00440000033697	ENSGT00940000156657	ENSGT00940000157383	ENSGT00950000183106.a.b	ENSGT00940000154273.a	ENSGT00940000160920
Elapidae	ANCESTRAL SPECIES	28	ENSGT00950000182805.a.a.b.a	ENSGT00940000159748	ENSGT01030000236833	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00940000168928	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033.e #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT01090000260044.D.i.a.b	ENSGT00940000153255	ENSGT01090000260044.D.i.a.a.b	ENSGT00440000033697
Elapidae_a	ANCESTRAL SPECIES	47	ENSGT00390000013354.c.a.a	ENSGT00940000156036	ENSGT00940000168539	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00940000168928	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033.e #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT01090000260044.D.i.a.b	ENSGT01090000260044.D.i.a.a.a
Acanthophiinae	ANCESTRAL SPECIES	44	ENSGT00390000013354.c.a.a	ENSGT00940000156036	ENSGT00940000168539	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00940000168928	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033.e #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT01090000260044.D.i.a.b	ENSGT01090000260044.D.i.a.a.a
Mainland tiger snake	MODERN SPECIES	384											ZNF384 (ENSNSUG00000018710) #15	ENSNSUG00000018709 #17	ENSNSUG00000018703 #18	LPAR5 (ENSNSUG00000018702) #20	CHD4 (ENSNSUG00000015782) #21	NOP2 (ENSNSUG00000015753) #22	IFFO1 (ENSNSUG00000015752) #23	GAPDH (ENSNSUG00000015751) #24	NCAPD2 (ENSNSUG00000015749) #26	MRPL51 (ENSNSUG00000015748) #27	VAMP1 (ENSNSUG00000015747) #28	SCNN1A (ENSNSUG00000015746) #32	ENSNSUG00000015745
Eastern brown snake	MODERN SPECIES	59	LRRC23 (ENSPTXG00000014239)	TPI1 (ENSPTXG00000014237)	USP5 (ENSPTXG00000014234)	ENSPTXG00000014233	GNB3 (ENSPTXG00000014230)	P3H3 (ENSPTXG00000014225) #7	GPR162 (ENSPTXG00000014224) #8	MLF2 (ENSPTXG00000014223) #12	COPS7A (ENSPTXG00000014221) #13	PIANP (ENSPTXG00000014220) #14	ZNF384 (ENSPTXG00000014216) #15	ING4 (ENSPTXG00000019084) #17	ACRBP (ENSPTXG00000019083) #18	LPAR5 (ENSPTXG00000019079) #20	CHD4 (ENSPTXG00000017528) #21	NOP2 (ENSPTXG00000017361) #22	IFFO1 (ENSPTXG00000017355) #23	GAPDH (ENSPTXG00000017354) #24	NCAPD2 (ENSPTXG00000017352) #26	MRPL51 (ENSPTXG00000017351) #27	VAMP1 (ENSPTXG00000017350) #28	SCNN1A (ENSPTXG00000017340) #32	ENSPTXG00000017337	ENSPTXG00000017335	ENSPTXG00000017333	ENSPTXG00000017330
Blue-lipped sea krait	MODERN SPECIES	7556															CHD4 (ENSLLTG00000010750) #21	NOP2 (ENSLLTG00000010661) #22	IFFO1 (ENSLLTG00000010640) #23	GAPDH (ENSLLTG00000010621) #24
Indian cobra	MODERN SPECIES	1	USP5 (ENSNNAG00000014250)	ENSNNAG00000014319	GNB3 (ENSNNAG00000014368)	P3H3 (ENSNNAG00000014400) #7	GPR162 (ENSNNAG00000014481) #8	ENSNNAG00000014513	ENSNNAG00000014534	MLF2 (ENSNNAG00000014552) #12	COPS7A (ENSNNAG00000014570) #13	ZNF384 (ENSNNAG00000014615) #15	ENSNNAG00000014706 #17	ENSNNAG00000014716 #18	ENSNNAG00000014724 #17	LPAR5 (ENSNNAG00000014754) #20	CHD4 (ENSNNAG00000014801) #21	NOP2 (ENSNNAG00000015292) #22	IFFO1 (ENSNNAG00000015319) #23	GAPDH (ENSNNAG00000015325) #24	NCAPD2 (ENSNNAG00000015351) #26	MRPL51 (ENSNNAG00000015367) #27	VAMP1 (ENSNNAG00000015372) #28	SCNN1A (ENSNNAG00000015407) #32	ENSNNAG00000015485	ENSNNAG00000015489	ENSNNAG00000015497	ENSNNAG00000015502	ENSNNAG00000015536	ENSNNAG00000015627	ENSNNAG00000015647	ENSNNAG00000015679	ENSNNAG00000015688
Lizard	MODERN SPECIES	994										PIANP (ENSACAG00000006078) #14	ZNF384 (ENSACAG00000006099) #15	ING4 (ENSACAG00000006150) #17	ENSACAG00000006209 #18	LPAR5 (ENSACAG00000006228) #20	CHD4 (ENSACAG00000006231) #21	NOP2 (ENSACAG00000006397) #22	IFFO1 (ENSACAG00000006451) #23	GAPDH (ENSACAG00000006502) #24	NCAPD2 (ENSACAG00000006580) #26	MRPL51 (ENSACAG00000042185) #27	VAMP1 (ENSACAG00000006678) #28	ENSACAG00000006704 #32	ENSACAG00000035988	ENSACAG00000034747	ENSACAG00000045492	ENSACAG00000006850	ENSACAG00000038456	ENSACAG00000042900	ENSACAG00000038435	ENSACAG00000036395	ENSACAG00000034729
tuatara	MODERN SPECIES	1253	ATN1 (ENSSPUG00000014541)	ENO2 (ENSSPUG00000014585)	LRRC23 (ENSSPUG00000014664)	TPI1 (ENSSPUG00000014685)	USP5 (ENSSPUG00000014695)	ENSSPUG00000014712	GNB3 (ENSSPUG00000014719)	ENSSPUG00000014840 #9	MLF2 (ENSSPUG00000014850) #12	COPS7A (ENSSPUG00000014867) #13	ZNF384 (ENSSPUG00000014935) #15	ING4 (ENSSPUG00000014965) #17	ENSSPUG00000014998	LPAR5 (ENSSPUG00000015098) #20	CHD4 (ENSSPUG00000015131) #21	NOP2 (ENSSPUG00000015240) #22	IFFO1 (ENSSPUG00000015263) #23	GAPDH (ENSSPUG00000015279) #24	NCAPD2 (ENSSPUG00000015362) #26	ENSSPUG00000015391	MRPL51 (ENSSPUG00000015396) #27	VAMP1 (ENSSPUG00000015408) #28	SCNN1A (ENSSPUG00000015425) #32	VTCN1 (ENSSPUG00000015444)	TRIM45 (ENSSPUG00000015481)	ENSSPUG00000015490	ENSSPUG00000015502	KIF21B (ENSSPUG00000015766)
Archelosauria	ANCESTRAL SPECIES	30	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00990000212708	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00940000180930	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500
Archosauria	ANCESTRAL SPECIES	2	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00990000212708	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500
Aves	ANCESTRAL SPECIES		ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00990000212708	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000160453 #29	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596
Neognathae	ANCESTRAL SPECIES	1	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000160453 #29	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596
Neognathae_b	ANCESTRAL SPECIES		ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000160453 #29	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596
Neognathae_c	ANCESTRAL SPECIES	4														ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000160453 #29	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596
Golden eagle	MODERN SPECIES	23	GNB3 (ENSACCG00020013094)	P3H3 (ENSACCG00020013136) #7	GPR162 (ENSACCG00020013153) #8	ENSACCG00020013263 #9	ENSACCG00020013369 #10	ENSACCG00020013433	MLF2 (ENSACCG00020013447) #12	COPS7A (ENSACCG00020013469) #13	PIANP (ENSACCG00020013498) #14	ZNF384 (ENSACCG00020013549) #15	ING4 (ENSACCG00020013592) #17	ACRBP (ENSACCG00020013667) #18	ENSACCG00020013696	LPAR5 (ENSACCG00020013710) #20	CHD4 (ENSACCG00020014713) #21	NOP2 (ENSACCG00020015636) #22	IFFO1 (ENSACCG00020015652) #23	GAPDH (ENSACCG00020015661) #24	ENSACCG00020015675	NCAPD2 (ENSACCG00020015694) #26	MRPL51 (ENSACCG00020015731) #27	VAMP1 (ENSACCG00020015750) #28	SCNN1A (ENSACCG00020015809) #32	TAPBPL (ENSACCG00020015886) #29	FBXO40 (ENSACCG00020015916)	KPNA1 (ENSACCG00020015930)	ENSACCG00020015948	MIX23 (ENSACCG00020015971)	CSTA (ENSACCG00020015985)	CSTB (ENSACCG00020015994)	CASR (ENSACCG00020016005)
Kakapo	MODERN SPECIES	28	GNB3 (ENSSHBG00005007225)	ENSSHBG00005007197 #7	GPR162 (ENSSHBG00005007180) #8	ENSSHBG00005006346 #9	ENSSHBG00005006239	ENSSHBG00005006180	MLF2 (ENSSHBG00005006148) #12	COPS7A (ENSSHBG00005006120) #13	PIANP (ENSSHBG00005006099) #14	ZNF384 (ENSSHBG00005006044) #15	ING4 (ENSSHBG00005006006) #17	ENSSHBG00005005978	ENSSHBG00005005961	LPAR5 (ENSSHBG00005005929) #20	CHD4 (ENSSHBG00005005796) #21	NOP2 (ENSSHBG00005005753) #22	IFFO1 (ENSSHBG00005000954) #23	GAPDH (ENSSHBG00005000947) #24	ENSSHBG00005000939	NCAPD2 (ENSSHBG00005000924) #26	MRPL51 (ENSSHBG00005009560) #27	VAMP1 (ENSSHBG00005009551) #28	SCNN1A (ENSSHBG00005009530) #32	FBXO40 (ENSSHBG00005009521)	KPNA1 (ENSSHBG00005009510)	FAM162A (ENSSHBG00005009499)	MIX23 (ENSSHBG00005009487)	ENSSHBG00005009467	ENSSHBG00005009455	ATP1A1 (ENSSHBG00005009427)	MAB21L3 (ENSSHBG00005009404)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500
Great tit	MODERN SPECIES		GNB3 (ENSPMJG00000007272)	P3H3 (ENSPMJG00000007300) #7	GPR162 (ENSPMJG00000007307) #8	ENSPMJG00000007310 #9	ENSPMJG00000007313	ENSPMJG00000007316	MLF2 (ENSPMJG00000007317) #12	COPS7A (ENSPMJG00000007320) #13	PIANP (ENSPMJG00000007323) #14	ZNF384 (ENSPMJG00000007327) #15	ING4 (ENSPMJG00000007335) #17	ENSPMJG00000007337 #18	ENSPMJG00000007341	LPAR5 (ENSPMJG00000007344) #20	CHD4 (ENSPMJG00000007345) #21	NOP2 (ENSPMJG00000007352) #22	ENSPMJG00000007376 #23	GAPDH (ENSPMJG00000007398) #24	ENSPMJG00000010092 #23	ENSPMJG00000010093	NCAPD2 (ENSPMJG00000010094) #26	MRPL51 (ENSPMJG00000010096) #27	VAMP1 (ENSPMJG00000010097) #28	SCNN1A (ENSPMJG00000010098) #32	FBXO40 (ENSPMJG00000010099)	KPNA1 (ENSPMJG00000010100)	FAM162A (ENSPMJG00000010101)	MIX23 (ENSPMJG00000010102)	ENSPMJG00000010103	CSTB (ENSPMJG00000010104)	CASR (ENSPMJG00000010157)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500
Passeriformes_g	ANCESTRAL SPECIES	25	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500
Common canary	MODERN SPECIES	4	GNB3 (ENSSCAG00000011581)	P3H3 (ENSSCAG00000011587) #7	GPR162 (ENSSCAG00000011592) #8	ENSSCAG00000011595 #9	ENSSCAG00000011620	ENSSCAG00000011629	MLF2 (ENSSCAG00000011635) #12	COPS7A (ENSSCAG00000011644) #13	PIANP (ENSSCAG00000011676) #14	ZNF384 (ENSSCAG00000011700) #15	ING4 (ENSSCAG00000011701) #17	ENSSCAG00000011706 #18	LPAR5 (ENSSCAG00000011712) #20	ENSSCAG00000011715	CHD4 (ENSSCAG00000012159) #21	ENSSCAG00000014175 #22	IFFO1 (ENSSCAG00000014177) #23	GAPDH (ENSSCAG00000014296) #24	ENSSCAG00000014608	NCAPD2 (ENSSCAG00000014615) #26	MRPL51 (ENSSCAG00000014627) #27	VAMP1 (ENSSCAG00000014630) #28	SCNN1A (ENSSCAG00000014632) #32	FBXO40 (ENSSCAG00000014639)	LRRC23 (ENSSCAG00000014644)	ENO2 (ENSSCAG00000014656)	ATN1 (ENSSCAG00000014678)	C12orf57 (ENSSCAG00000014688)	PTPN6 (ENSSCAG00000014698)	PHB2 (ENSSCAG00000014710)	ENSSCAG00000014717
Zebra finch	MODERN SPECIES		USP5 (ENSTGUG00000013294)	CDCA3 (ENSTGUG00000013300)	GNB3 (ENSTGUG00000013301)	P3H3 (ENSTGUG00000013302) #7	GPR162 (ENSTGUG00000018169) #8	ENSTGUG00000013304 #9	ENSTGUG00000013307	ENSTGUG00000013310 #12	COPS7A (ENSTGUG00000013312) #13	PIANP (ENSTGUG00000023446) #14	ZNF384 (ENSTGUG00000013319) #15	ING4 (ENSTGUG00000013323) #17	ACRBP (ENSTGUG00000013326) #18	LPAR5 (ENSTGUG00000013328) #20	CHD4 (ENSTGUG00000013329) #21	NOP2 (ENSTGUG00000013336) #22	IFFO1 (ENSTGUG00000028638) #23	ENSTGUG00000021208 #25	GAPDH (ENSTGUG00000013338) #24	ENSTGUG00000025317	ENSTGUG00000025583	NCAPD2 (ENSTGUG00000013339) #26	VAMP1 (ENSTGUG00000029109) #28	SCNN1A (ENSTGUG00000013342) #32	FBXO40 (ENSTGUG00000013343)	KPNA1 (ENSTGUG00000013344)	FAM162A (ENSTGUG00000028619)	MIX23 (ENSTGUG00000023858)	CSTB (ENSTGUG00000013347)	CASR (ENSTGUG00000013348)	CD86 (ENSTGUG00000013349)
Medium ground finch	MODERN SPECIES	23	USP5 (ENSGFOG00000013290)	GNB3 (ENSGFOG00000013285)	P3H3 (ENSGFOG00000013283) #7	GPR162 (ENSGFOG00000013280) #8	ENSGFOG00000013276 #9	ENSGFOG00000013260	ENSGFOG00000013258	MLF2 (ENSGFOG00000013254) #12	COPS7A (ENSGFOG00000013250) #13	PIANP (ENSGFOG00000013247) #14	ZNF384 (ENSGFOG00000013243) #15	ING4 (ENSGFOG00000013241) #17	ACRBP (ENSGFOG00000013235) #18	LPAR5 (ENSGFOG00000013232) #20	CHD4 (ENSGFOG00000002570) #21	NOP2 (ENSGFOG00000001873) #22	IFFO1 (ENSGFOG00000001865) #23	GAPDH (ENSGFOG00000001749) #24	ENSGFOG00000001719	NCAPD2 (ENSGFOG00000001676) #26	MRPL51 (ENSGFOG00000001666) #27	VAMP1 (ENSGFOG00000001664) #28	SCNN1A (ENSGFOG00000001648) #32	FBXO40 (ENSGFOG00000001639)	KPNA1 (ENSGFOG00000001625)	FAM162A (ENSGFOG00000001617)	MIX23 (ENSGFOG00000001601)	CSTA (ENSGFOG00000001450)	CSTB (ENSGFOG00000001425)	CASR (ENSGFOG00000001412)	ENSGFOG00000001401
Flycatcher	MODERN SPECIES		LRRC23 (ENSFALG00000004669)	USP5 (ENSFALG00000004685)	GNB3 (ENSFALG00000004692)	P3H3 (ENSFALG00000004696) #7	GPR162 (ENSFALG00000004699) #8	ENSFALG00000004705 #9	ENSFALG00000004715	ENSFALG00000023328	ENSFALG00000004741 #15	COPS7A (ENSFALG00000027863) #13	PIANP (ENSFALG00000004734) #14	ING4 (ENSFALG00000004756) #17	ACRBP (ENSFALG00000004771) #18	LPAR5 (ENSFALG00000014540) #20	CHD4 (ENSFALG00000004785) #21	NOP2 (ENSFALG00000004797) #22	IFFO1 (ENSFALG00000004808) #23	GAPDH (ENSFALG00000023061) #24	ENSFALG00000004823	NCAPD2 (ENSFALG00000004826) #26	MRPL51 (ENSFALG00000004836) #27	VAMP1 (ENSFALG00000004846) #28	ENSFALG00000004870 #32	ENSFALG00000004892	KPNA1 (ENSFALG00000004916)	ENSFALG00000004944	MIX23 (ENSFALG00000004953)	ENSFALG00000027758	ENSFALG00000004967	ENSFALG00000004975	ENSFALG00000004988
Galloanserae	ANCESTRAL SPECIES	1	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000160453 #29	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596
Phasianidae	ANCESTRAL SPECIES		ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000160453 #29	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596
Phasianidae_b	ANCESTRAL SPECIES		ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00940000168928	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00940000160453 #29	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596
Chicken	MODERN SPECIES		GNB3 (ENSGALG00010023351)	P3H3 (ENSGALG00010023340) #7	GPR162 (ENSGALG00010023336) #8	CD4 (ENSGALG00010023331) #9	LAG3 (ENSGALG00010023324) #10	ENSGALG00010023320	MLF2 (ENSGALG00010021530) #12	COPS7A (ENSGALG00010021704) #13	PIANP (ENSGALG00010021697) #14	ZNF384 (ENSGALG00010021687) #15	ING4 (ENSGALG00010021674) #17	ACRBP (ENSGALG00010021614) #18	ENSGALG00010021608	LPAR5 (ENSGALG00010021601) #20	CHD4 (ENSGALG00010022093) #21	NOP2 (ENSGALG00010022069) #22	IFFO1 (ENSGALG00010022052) #23	GAPDH (ENSGALG00010022038) #24	CNP1 (ENSGALG00010022017)	NCAPD2 (ENSGALG00010021989) #26	MRPL51 (ENSGALG00010021922) #27	VAMP1 (ENSGALG00010021801) #28	SCNN1A (ENSGALG00010021866) #32	TAPBPL (ENSGALG00010021854) #29	FBXO40 (ENSGALG00010021826)	KPNA1 (ENSGALG00010026081)	FAM162A (ENSGALG00010021786)	CCDC58 (ENSGALG00010021767)	CSTA (ENSGALG00010021760)	CSTB (ENSGALG00010021752)	CASR (ENSGALG00010021732)
Turkey	MODERN SPECIES		ENSMGAG00000013992	ENSMGAG00000013991	MIX23 (ENSMGAG00000013996)	ENSMGAG00000013998	ENSMGAG00000013997	ENSMGAG00000019527	ENSMGAG00000014002 #29	ENSMGAG00000014001	ENSMGAG00000014091 #28	ENSMGAG00000014003 #32	MRPL51 (ENSMGAG00000014092) #27	ENSMGAG00000018438	ENSMGAG00000014095	ENSMGAG00000014081 #23	GAPDH (ENSMGAG00000014005) #24	NOP2 (ENSMGAG00000014082) #22	CHD4 (ENSMGAG00000014084) #21	ING4 (ENSMGAG00000014098) #17	ENSMGAG00000014097 #18	ENSMGAG00000014096 #20	ZNF384 (ENSMGAG00000014101) #15	ENSMGAG00000014103 #14	ENSMGAG00000014106 #13	ENSMGAG00000014109 #12	CD4 (ENSMGAG00000014113) #9	ENSMGAG00000014111	ENSMGAG00000018668	GPR162 (ENSMGAG00000014115) #8	ENSMGAG00000014120	ENSMGAG00000014116 #7	USP5 (ENSMGAG00000014124)
Anatidae	ANCESTRAL SPECIES	6	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00730000114155	ENSGT00940000153566.a #26	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000157596	ENSGT00940000161500	ENSGT00940000157498
Duck	MODERN SPECIES		USP5 (ENSAPLG00000003443)	GNB3 (ENSAPLG00000003313)	P3H3 (ENSAPLG00000002993) #7	GPR162 (ENSAPLG00000028368) #8	LAG3 (ENSAPLG00000002679) #10	ENSAPLG00000000776	MLF2 (ENSAPLG00000002492) #12	COPS7A (ENSAPLG00000001230) #13	PIANP (ENSAPLG00000021371) #14	ZNF384 (ENSAPLG00000015889) #15	ING4 (ENSAPLG00000015791) #17	ENSAPLG00000029811	ENSAPLG00000015437	LPAR5 (ENSAPLG00000001294) #20	CHD4 (ENSAPLG00000014146) #21	NOP2 (ENSAPLG00000020826) #22	IFFO1 (ENSAPLG00000026823) #23	ENSAPLG00000027352	NCAPD2 (ENSAPLG00000013121) #26	MRPL51 (ENSAPLG00000025855) #27	VAMP1 (ENSAPLG00000013048) #28	SCNN1A (ENSAPLG00000012377) #32	TAPBPL (ENSAPLG00000013511) #29	FBXO40 (ENSAPLG00000005334)	KPNA1 (ENSAPLG00000004886)	FAM162A (ENSAPLG00000004872)	ENSAPLG00000020387	FOXJ2 (ENSAPLG00000013506)	C3AR1 (ENSAPLG00000001977)	NECAP1 (ENSAPLG00000013392)	ENSAPLG00000013634
African ostrich	MODERN SPECIES	972	ENSSCUG00000017905 #9	ENSSCUG00000017902	ENSSCUG00000017901	MLF2 (ENSSCUG00000017898) #12	ENSSCUG00000017897	COPS7A (ENSSCUG00000017895) #13	PIANP (ENSSCUG00000017894) #14	ENSSCUG00000017892	ZNF384 (ENSSCUG00000017890) #15	ING4 (ENSSCUG00000017887) #17	ACRBP (ENSSCUG00000017885) #18	ENSSCUG00000017884	ENSSCUG00000017883	LPAR5 (ENSSCUG00000017882) #20	CHD4 (ENSSCUG00000017880) #21	NOP2 (ENSSCUG00000017879) #22	IFFO1 (ENSSCUG00000017877) #23	GAPDH (ENSSCUG00000017876) #24	ENSSCUG00000017875	ENSSCUG00000017873	NCAPD2 (ENSSCUG00000017870) #26	VAMP1 (ENSSCUG00000017868) #28	ENSSCUG00000017860 #32	TAPBPL (ENSSCUG00000017852) #29	FBXO40 (ENSSCUG00000017851)	KPNA1 (ENSSCUG00000017848)	FAM162A (ENSSCUG00000017847)	ENSSCUG00000017845	CSTA (ENSSCUG00000017844)	ENSSCUG00000017842	CSTB (ENSSCUG00000017840)
Australian saltwater crocodile	MODERN SPECIES	60	GNB3 (ENSCPRG00005005605)	P3H3 (ENSCPRG00005005662) #7	GPR162 (ENSCPRG00005005667) #8	ENSCPRG00005005677	ENSCPRG00005005769	ENSCPRG00005005775	MLF2 (ENSCPRG00005005783) #12	COPS7A (ENSCPRG00005005800) #13	PIANP (ENSCPRG00005005804) #14	ZNF384 (ENSCPRG00005005809) #15	ING4 (ENSCPRG00005005824) #17	ENSCPRG00005005847	ENSCPRG00005005863	LPAR5 (ENSCPRG00005005932) #20	CHD4 (ENSCPRG00005006161) #21	NOP2 (ENSCPRG00005007691) #22	IFFO1 (ENSCPRG00005007699) #23	GAPDH (ENSCPRG00005007744) #24	GAPDHS (ENSCPRG00005007750)	LSR (ENSCPRG00005007774)	MAG (ENSCPRG00005007802)	ENSCPRG00005007821	ENSCPRG00005007828	NCAPD2 (ENSCPRG00005007847) #26	MRPL51 (ENSCPRG00005008007) #27	ENSCPRG00005008010	VAMP1 (ENSCPRG00005008021) #28	SCNN1A (ENSCPRG00005008027) #32	TAPBPL (ENSCPRG00005008048) #29	TTL (ENSCPRG00005008072)	POLR1B (ENSCPRG00005008080)
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00940000180930	ENSGT00390000018821 #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596.j	ENSGT00940000157498
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00940000159654	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821.w #27	ENSGT00940000180930	ENSGT00390000018821.x #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000157596.j
Testudinidae	ANCESTRAL SPECIES		ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT01090000259985.b.b.b.a.a.a #10	ENSGT00950000185787	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00940000169199	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00940000153566.a #26	ENSGT00390000018821.w #27	ENSGT00940000180930	ENSGT00390000018821.x #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000165953	ENSGT00940000155717	ENSGT00940000154826
Goode s thornscrub tortoise	MODERN SPECIES		P3H3 (ENSGEVG00005008983) #7	GPR162 (ENSGEVG00005008929) #8	ENSGEVG00005008913	ENSGEVG00005008896	ENSGEVG00005008875 #9	ENSGEVG00005008834 #10	ENSGEVG00005008802	MLF2 (ENSGEVG00005008774) #12	COPS7A (ENSGEVG00005003541) #13	PIANP (ENSGEVG00005003529) #14	ZNF384 (ENSGEVG00005003517) #15	ING4 (ENSGEVG00005003505) #17	ENSGEVG00005003499 #18	ENSGEVG00005003453	LPAR5 (ENSGEVG00005003431) #20	NOP2 (ENSGEVG00005003128) #22	IFFO1 (ENSGEVG00005003106) #23	GAPDH (ENSGEVG00005003083) #24	NCAPD2 (ENSGEVG00005003050) #26	ENSGEVG00005003033	MRPL51 (ENSGEVG00005003025) #27	VAMP1 (ENSGEVG00005003014) #28	SCNN1A (ENSGEVG00005002994) #32	FBXO40 (ENSGEVG00005002988)	KPNA1 (ENSGEVG00005002970)	FAM162A (ENSGEVG00005002958)	MIX23 (ENSGEVG00005002925)	ENSGEVG00005002899	ENSGEVG00005002892	CSTB (ENSGEVG00005002885)	CASR (ENSGEVG00005002867)
Abingdon island giant tortoise	MODERN SPECIES	151	ENSCABG00000012050	GNB3 (ENSCABG00000012032)	ENSCABG00000012031	P3H3 (ENSCABG00000012030) #7	ENSCABG00000011952 #9	ENSCABG00000011937 #10	MLF2 (ENSCABG00000011913) #12	COPS7A (ENSCABG00000011840) #13	PIANP (ENSCABG00000011787) #14	ZNF384 (ENSCABG00000011769) #15	ING4 (ENSCABG00000011761) #17	ACRBP (ENSCABG00000011760) #18	ENSCABG00000011633	LPAR5 (ENSCABG00000011614) #20	CHD4 (ENSCABG00000010094) #21	NOP2 (ENSCABG00000010042) #22	IFFO1 (ENSCABG00000010034) #23
Emydidae	ANCESTRAL SPECIES	57	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a	ENSGT00940000159164 #7	ENSGT00390000017213.A #8	ENSGT00390000001745 #9	ENSGT00940000168928	ENSGT00390000005023.a #12	ENSGT00940000159873 #13	ENSGT00510000049460 #14	ENSGT00940000156904 #15	ENSGT00940000159033 #17	ENSGT00390000000826 #18	ENSGT00940000159654	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298 #24	ENSGT00390000018821.x #27	ENSGT00940000161390 #28	ENSGT00940000160952 #32	ENSGT00950000183204.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a.o	ENSGT00390000011053	ENSGT00940000155717.b
Three-toed box turtle	MODERN SPECIES	357	GNB3 (ENSTMTG00000008647)	P3H3 (ENSTMTG00000008695) #7	GPR162 (ENSTMTG00000008765) #8	ENSTMTG00000008800	ENSTMTG00000003376 #10	ENSTMTG00000003450	MLF2 (ENSTMTG00000003474) #12	COPS7A (ENSTMTG00000003508) #13	PIANP (ENSTMTG00000003558) #14	ZNF384 (ENSTMTG00000003676) #15	ING4 (ENSTMTG00000003702) #17	ACRBP (ENSTMTG00000003723) #18	ENSTMTG00000003778	LPAR5 (ENSTMTG00000003957) #20	CHD4 (ENSTMTG00000003980) #21	NOP2 (ENSTMTG00000004069) #22	IFFO1 (ENSTMTG00000004114) #23	GAPDH (ENSTMTG00000004141) #24	MRPL51 (ENSTMTG00000004280) #27	VAMP1 (ENSTMTG00000004297) #28	SCNN1A (ENSTMTG00000004309) #32	FBXO40 (ENSTMTG00000004340)	KPNA1 (ENSTMTG00000004353)	FAM162A (ENSTMTG00000004416)	MIX23 (ENSTMTG00000004437)	ENSTMTG00000004451
painted turtle	MODERN SPECIES	920		ENSCPBG00000027681	P3H3 (ENSCPBG00000027684) #7	GPR162 (ENSCPBG00000027687) #8	ENSCPBG00000027689 #9	ENSCPBG00000027692	MLF2 (ENSCPBG00000027696) #12	COPS7A (ENSCPBG00000027700) #13	PIANP (ENSCPBG00000027702) #14	ZNF384 (ENSCPBG00000027704) #15	ING4 (ENSCPBG00000027709) #17	ACRBP (ENSCPBG00000027712) #18	ENSCPBG00000027713	LPAR5 (ENSCPBG00000027715) #20	CHD4 (ENSCPBG00000027716) #21	NOP2 (ENSCPBG00000027725) #22	IFFO1 (ENSCPBG00000027730) #23	GAPDH (ENSCPBG00000027732) #24	ENSCPBG00000000417 #27	VAMP1 (ENSCPBG00000000451) #28	SCNN1A (ENSCPBG00000000498) #32	FBXO40 (ENSCPBG00000000558)	KPNA1 (ENSCPBG00000000593)	FAM162A (ENSCPBG00000000645)	ENSCPBG00000000668	MIX23 (ENSCPBG00000000693)	ENSCPBG00000000710
Chinese turtle	MODERN SPECIES	1166	USP5 (ENSPSIG00000013620)	GNB3 (ENSPSIG00000014105)	P3H3 (ENSPSIG00000014258) #7	GPR162 (ENSPSIG00000014547) #8	ENSPSIG00000014631 #9	ENSPSIG00000014771 #10	MLF2 (ENSPSIG00000014808) #12	COPS7A (ENSPSIG00000015085) #13	PIANP (ENSPSIG00000015128) #14	ENSPSIG00000015173 #15	ING4 (ENSPSIG00000015200) #17	ACRBP (ENSPSIG00000015272) #18	ENSPSIG00000015498	LPAR5 (ENSPSIG00000001680) #20	CHD4 (ENSPSIG00000015546) #21	NOP2 (ENSPSIG00000016127) #22	IFFO1 (ENSPSIG00000016191) #23	GAPDH (ENSPSIG00000016258) #24	NCAPD2 (ENSPSIG00000016447) #26	MRPL51 (ENSPSIG00000016487) #27	ENSPSIG00000016512	SCNN1A (ENSPSIG00000016541) #32	FBXO40 (ENSPSIG00000016880)	KPNA1 (ENSPSIG00000016887)	FAM162A (ENSPSIG00000016970)	MIX23 (ENSPSIG00000016987)	ENSPSIG00000016991	CSTA (ENSPSIG00000017000)