Muroidea_A	ANCESTRAL SPECIES	4	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00390000005023.a #14	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904 #17	ENSGT01100000267007	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a #24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00910000146741	ENSGT00510000049297 #29	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37
Murinae	ANCESTRAL SPECIES	4	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00390000005023.a #14	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904 #17	ENSGT01100000267007	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a #24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00510000049297 #29	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37	ENSGT00390000007725.A.a
Mus	ANCESTRAL SPECIES	12	ENSGT00390000017343 #7	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00390000005023.a #14	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904 #17	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a #24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00510000049297 #29	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37	ENSGT00390000007725.A.a
Mus_A	ANCESTRAL SPECIES	7	ENSGT00390000017343 #7	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00390000005023.a #14	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904 #17	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a #24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00510000049297 #29	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37	ENSGT00390000007725.A.a
Mus_B	ANCESTRAL SPECIES	15	ENSGT00390000017343.g #7	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00390000005023.a #14	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904.e.a #17	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a.b.a.b #24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00510000049297 #29	ENSGT00950000182825.B #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37
Mouse	MODERN SPECIES	15	Cdca3 (ENSMUSG00000023505) #7	Gnb3 (ENSMUSG00000023439) #8	P3h3 (ENSMUSG00000023191) #9	Gpr162 (ENSMUSG00000038390) #10	Cd4 (ENSMUSG00000023274) #11	Lag3 (ENSMUSG00000030124) #12	Ptms (ENSMUSG00000030122) #13	Mlf2 (ENSMUSG00000030120) #14	Cops7a (ENSMUSG00000030127) #15	Pianp (ENSMUSG00000030329) #16	Zfp384 (ENSMUSG00000038346) #17	Ing4 (ENSMUSG00000030330) #18	Acrbp (ENSMUSG00000072770) #19	Lpar5 (ENSMUSG00000067714) #20	Chd4 (ENSMUSG00000063870) #21	Nop2 (ENSMUSG00000038279) #22	Iffo1 (ENSMUSG00000038271) #23	Gapdh (ENSMUSG00000057666) #24	Ncapd2 (ENSMUSG00000038252) #25	Mrpl51 (ENSMUSG00000030335) #26	Vamp1 (ENSMUSG00000030337) #27	Tapbpl (ENSMUSG00000038213) #28	Cd27 (ENSMUSG00000030336) #29	Tuba3a (ENSMUSG00000067702) #30	Ltbr (ENSMUSG00000030339) #31	Scnn1a (ENSMUSG00000030340) #32	Tnfrsf1a (ENSMUSG00000030341) #33	Plekhg6 (ENSMUSG00000038167) #34	Cd9 (ENSMUSG00000030342) #35	Vwf (ENSMUSG00000001930) #36	Ano2 (ENSMUSG00000038115) #37
Mus_C	ANCESTRAL SPECIES	18	ENSGT00390000017343.g #7	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00940000168330	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904.e.a #17	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.b.a.a.a.b.a.b #24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00510000049297 #29	ENSGT00950000182825.B #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37
Steppe mouse	MODERN SPECIES	2453									Cops7a (ENSMSIG00000005376) #15	Pianp (ENSMSIG00000005454) #16	Zfp384 (ENSMSIG00000005490) #17	Ing4 (ENSMSIG00000005976) #18	Acrbp (ENSMSIG00000006066) #19	Lpar5 (ENSMSIG00000006314) #20	Chd4 (ENSMSIG00000006341) #21	Nop2 (ENSMSIG00000006620) #22	Iffo1 (ENSMSIG00000006668) #23	ENSMSIG00000006759 #24	Ncapd2 (ENSMSIG00000006811) #25	Mrpl51 (ENSMSIG00000006876) #26	Vamp1 (ENSMSIG00000006906) #27	Tapbpl (ENSMSIG00000006978) #28	Cd27 (ENSMSIG00000007002) #29	ENSMSIG00000007122 #30	Ltbr (ENSMSIG00000007137) #31	Scnn1a (ENSMSIG00000007175) #32	Tnfrsf1a (ENSMSIG00000007222) #33	Plekhg6 (ENSMSIG00000007258) #34
Rat	MODERN SPECIES	14	P3h3 (ENSRNOG00000071218) #9	Gpr162 (ENSRNOG00000016143) #10	ENSRNOG00000071219 #11	Lag3 (ENSRNOG00000021334) #12	Ptms (ENSRNOG00000060098) #13	AC115420.4 (ENSRNOG00000060308)	Mlf2 (ENSRNOG00000016589) #14	Cops7a (ENSRNOG00000016778) #15	Pianp (ENSRNOG00000017052) #16	Zfp384 (ENSRNOG00000017066) #17	ENSRNOG00000066393	Acrbp (ENSRNOG00000017399) #19	Ing4 (ENSRNOG00000023363) #18	Lpar5 (ENSRNOG00000021401) #20	Chd4 (ENSRNOG00000018309) #21	Nop2 (ENSRNOG00000018453) #22	Iffo1 (ENSRNOG00000018533) #23	LOC108351137 (ENSRNOG00000018630) #24	Ncapd2 (ENSRNOG00000055300) #25	Mrpl51 (ENSRNOG00000019165) #26	Vamp1 (ENSRNOG00000019219) #27	Cd27 (ENSRNOG00000027466) #29	Tuba3b (ENSRNOG00000031707) #30	Ltbr (ENSRNOG00000019264) #31	Scnn1a (ENSRNOG00000019368) #32	Tnfrsf1a (ENSRNOG00000031312) #33	Plekhg6 (ENSRNOG00000019528) #34	ENSRNOG00000064217	Cd9 (ENSRNOG00000019556) #35	Vwf (ENSRNOG00000019689) #36	Ano2 (ENSRNOG00000023561) #37
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00390000017343 #7	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00390000005023.a #14	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904 #17	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.a ##24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00910000146741	ENSGT00510000049297 #29	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00390000017343 #7	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00390000005023.a #14	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904 #17	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.a ##24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00510000049297 #29	ENSGT00950000182825.B #30	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37
Chinese hamster chok1gshd	MODERN SPECIES	289	Cdca3 (ENSCGRG00001013882) #7	Gnb3 (ENSCGRG00001016439) #8	P3h3 (ENSCGRG00001000528) #9	Gpr162 (ENSCGRG00001003162) #10	Cd4 (ENSCGRG00001013261) #11	Lag3 (ENSCGRG00001022458) #12	Ptms (ENSCGRG00001001584) #13	Mlf2 (ENSCGRG00001010430) #14	Cops7a (ENSCGRG00001014256) #15	Pianp (ENSCGRG00001015100) #16	Zfp384 (ENSCGRG00001013065) #17	Ing4 (ENSCGRG00001016033) #18	Acrbp (ENSCGRG00001017982) #19	Lpar5 (ENSCGRG00001014775) #20	Chd4 (ENSCGRG00001020662) #21	Nop2 (ENSCGRG00001020970) #22	Iffo1 (ENSCGRG00001000162) #23	ENSCGRG00001006857 ##24	Ncapd2 (ENSCGRG00001002247) #25	ENSCGRG00001010566 #26	Vamp1 (ENSCGRG00001014055) #27	ENSCGRG00001020124 #28	Cd27 (ENSCGRG00001009970) #29	ENSCGRG00001013937 #30	Ltbr (ENSCGRG00001015407) #31	Scnn1a (ENSCGRG00001020304) #32	Tnfrsf1a (ENSCGRG00001021062) #33	Plekhg6 (ENSCGRG00001021507) #34	ENSCGRG00001015575	Cd9 (ENSCGRG00001022703) #35	Vwf (ENSCGRG00001000364) #36
Cricetidae_B	ANCESTRAL SPECIES	14	ENSGT00390000017343 #7	ENSGT01000000214413.b.a.b.a #8	ENSGT00940000159164 #9	ENSGT00390000017213.A #10	ENSGT00390000001745 #11	ENSGT01090000259985.b.b.b.a.a.a #12	ENSGT01100000264105 #13	ENSGT00390000005023.a #14	ENSGT00940000159873 #15	ENSGT00510000049460 #16	ENSGT00940000156904 #17	ENSGT00940000159033 #18	ENSGT00390000000826 #19	ENSGT00950000183136.b.b #20	ENSGT00940000155088 #21	ENSGT00940000161554 #22	ENSGT00510000046803.b.b #23	ENSGT00940000153298.m.b.a.a.a ##24	ENSGT00940000153566.a #25	ENSGT00390000018821 #26	ENSGT00940000161390 #27	ENSGT00940000160453 #28	ENSGT00910000146741	ENSGT00510000049297 #29	ENSGT00940000162178 #31	ENSGT00940000160952 #32	ENSGT00940000159540 #33	ENSGT00940000161250 #34	ENSGT00940000155083.b #35	ENSGT00940000155810 #36	ENSGT00940000155840.C #37
Prairie vole	MODERN SPECIES	84	Cdca3 (ENSMOCG00000008232) #7	Gnb3 (ENSMOCG00000019447) #8	P3h3 (ENSMOCG00000014085) #9	Gpr162 (ENSMOCG00000018395) #10	Cd4 (ENSMOCG00000007576) #11	Lag3 (ENSMOCG00000016856) #12	Ptms (ENSMOCG00000011411) #13	ENSMOCG00000000196 #14	Cops7a (ENSMOCG00000018184) #15	Pianp (ENSMOCG00000012046) #16	Zfp384 (ENSMOCG00000022768) #17	Ing4 (ENSMOCG00000010335) #18	Acrbp (ENSMOCG00000017657) #19	Lpar5 (ENSMOCG00000021762) #20	Chd4 (ENSMOCG00000020624) #21	Nop2 (ENSMOCG00000017237) #22	Iffo1 (ENSMOCG00000003850) #23	ENSMOCG00000000471 ##24	ENSMOCG00000000297 #25	Mrpl51 (ENSMOCG00000013685) #26	Vamp1 (ENSMOCG00000019201) #27	Tapbpl (ENSMOCG00000000244) #28	Cd27 (ENSMOCG00000017717) #29	Ltbr (ENSMOCG00000015975) #31	Scnn1a (ENSMOCG00000000794) #32	Tnfrsf1a (ENSMOCG00000013868) #33	Plekhg6 (ENSMOCG00000006971) #34	Cd9 (ENSMOCG00000022019) #35	Vwf (ENSMOCG00000005320) #36	Ano2 (ENSMOCG00000000380) #37	Ntf3 (ENSMOCG00000001488)
Northern American deer mouse	MODERN SPECIES	16	Cdca3 (ENSPEMG00000016358) #7	Gnb3 (ENSPEMG00000016368) #8	P3h3 (ENSPEMG00000011450) #9	Gpr162 (ENSPEMG00000017095) #10	ENSPEMG00000024347 #11	Lag3 (ENSPEMG00000018743) #12	ENSPEMG00000016593 #13	Mlf2 (ENSPEMG00000013094) #14	Cops7a (ENSPEMG00000002860) #15	Pianp (ENSPEMG00000013120) #16	Zfp384 (ENSPEMG00000016282) #17	Ing4 (ENSPEMG00000018496) #18	Acrbp (ENSPEMG00000010165) #19	Lpar5 (ENSPEMG00000019056) #20	Chd4 (ENSPEMG00000010290) #21	Nop2 (ENSPEMG00000013138) #22	Iffo1 (ENSPEMG00000008539) #23	ENSPEMG00000001195 ##24	Ncapd2 (ENSPEMG00000016112) #25	Mrpl51 (ENSPEMG00000008667) #26	Vamp1 (ENSPEMG00000006934) #27	Tapbpl (ENSPEMG00000003668) #28	ENSPEMG00000028083	Cd27 (ENSPEMG00000012177) #29	ENSPEMG00000025965 #30	Ltbr (ENSPEMG00000014957) #31	Scnn1a (ENSPEMG00000012010) #32	Tnfrsf1a (ENSPEMG00000009612) #33	Plekhg6 (ENSPEMG00000013888) #34	Cd9 (ENSPEMG00000008270) #35	Vwf (ENSPEMG00000010217) #36