Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Glires ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Rodentia ANCESTRAL SPECIES 2 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Rodentia_B ANCESTRAL SPECIES 26 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Myomorpha ANCESTRAL SPECIES 36 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Muroidea ANCESTRAL SPECIES 37 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Muroidea_A ANCESTRAL SPECIES 4 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00960000189964 #25 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Murinae ANCESTRAL SPECIES 4 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00960000189964 #25 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Rat MODERN SPECIES 14 Shq1 (ENSRNOG00000005433) #7 Actg1-ps9 (ENSRNOG00000062691) #8 Gxylt2 (ENSRNOG00000005621) #9 Ppp4r2 (ENSRNOG00000024647) #10 Pdzrn3 (ENSRNOG00000057556) #11 Cntn3 (ENSRNOG00000006144) #12 Chl1 (ENSRNOG00000045771) #13 ENSRNOG00000065903 #14 AABR07061614.1 (ENSRNOG00000032820) #15 Cntn6 (ENSRNOG00000032517) #16 Cntn4 (ENSRNOG00000005652) #17 Il5ra (ENSRNOG00000005954) #18 Trnt1 (ENSRNOG00000006432) #19 Crbn (ENSRNOG00000006534) #20 Lrrn1 (ENSRNOG00000006802) #21 Setmar (ENSRNOG00000006806) #22 Sumf1 (ENSRNOG00000006813) #23 Itpr1 (ENSRNOG00000007104) #24 AABR07061707.1 (ENSRNOG00000052718) #25 Bhlhe40 (ENSRNOG00000007152) #26 Arl8b (ENSRNOG00000055860) #27 Edem1 (ENSRNOG00000055365) #28 Grm7 (ENSRNOG00000005662) #29 LOC120102505 (ENSRNOG00000042804) #30 ENSRNOG00000064122 #31 Lmcd1 (ENSRNOG00000005690) #32 Ssuh2 (ENSRNOG00000005734) #33 Cav3 (ENSRNOG00000005798) #34 Oxtr (ENSRNOG00000005806) #35 Rad18 (ENSRNOG00000005907) #36 Srgap3 (ENSRNOG00000006509) #37 Mus ANCESTRAL SPECIES 12 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Mus_A ANCESTRAL SPECIES 7 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Mus_B ANCESTRAL SPECIES 15 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Mouse MODERN SPECIES 15 Gpr27 (ENSMUSG00000072875) Prok2 (ENSMUSG00000030069) Rybp (ENSMUSG00000072872) Shq1 (ENSMUSG00000035378) #7 Gxylt2 (ENSMUSG00000030074) #9 Ppp4r2 (ENSMUSG00000052144) #10 Pdzrn3 (ENSMUSG00000035357) #11 Cntn3 (ENSMUSG00000030075) #12 Chl1 (ENSMUSG00000030077) #13 Cntn6 (ENSMUSG00000030092) #16 Cntn4 (ENSMUSG00000064293) #17 Il5ra (ENSMUSG00000005364) #18 Trnt1 (ENSMUSG00000013736) #19 Crbn (ENSMUSG00000005362) #20 Lrrn1 (ENSMUSG00000034648) #21 Setmar (ENSMUSG00000034639) #22 Sumf1 (ENSMUSG00000030101) #23 Itpr1 (ENSMUSG00000030102) #24 Bhlhe40 (ENSMUSG00000030103) #26 Arl8b (ENSMUSG00000030105) #27 Edem1 (ENSMUSG00000030104) #28 Grm7 (ENSMUSG00000056755) #29 Lmcd1 (ENSMUSG00000057604) #32 Ssu2 (ENSMUSG00000034387) #33 Cav3 (ENSMUSG00000062694) #34 Oxtr (ENSMUSG00000049112) #35 Rad18 (ENSMUSG00000030254) #36 Srgap3 (ENSMUSG00000030257) #37 Thumpd3 (ENSMUSG00000030264) Setd5 (ENSMUSG00000034269) Lhfpl4 (ENSMUSG00000042873) Mus_C ANCESTRAL SPECIES 18 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b spretus MODERN SPECIES 15 Gpr27 (MGP_SPRETEiJ_G0029714) Prok2 (MGP_SPRETEiJ_G0029715) Rybp (MGP_SPRETEiJ_G0029716) Shq1 (MGP_SPRETEiJ_G0029717) #7 Gxylt2 (MGP_SPRETEiJ_G0029718) #9 Ppp4r2 (MGP_SPRETEiJ_G0029719) #10 Pdzrn3 (MGP_SPRETEiJ_G0029720) #11 Cntn3 (MGP_SPRETEiJ_G0029721) #12 Chl1 (MGP_SPRETEiJ_G0029722) #13 Cntn6 (MGP_SPRETEiJ_G0029723) #16 Cntn4 (MGP_SPRETEiJ_G0029724) #17 Il5ra (MGP_SPRETEiJ_G0029725) #18 Trnt1 (MGP_SPRETEiJ_G0029726) #19 Crbn (MGP_SPRETEiJ_G0029727) #20 Lrrn1 (MGP_SPRETEiJ_G0029728) #21 Setmar (MGP_SPRETEiJ_G0029729) #22 Sumf1 (MGP_SPRETEiJ_G0029730) #23 Itpr1 (MGP_SPRETEiJ_G0029731) #24 Bhlhe40 (MGP_SPRETEiJ_G0029732) #26 Arl8b (MGP_SPRETEiJ_G0029733) #27 Edem1 (MGP_SPRETEiJ_G0029734) #28 Grm7 (MGP_SPRETEiJ_G0029735) #29 Lmcd1 (MGP_SPRETEiJ_G0029736) #32 Ssu2 (MGP_SPRETEiJ_G0029737) #33 Cav3 (MGP_SPRETEiJ_G0029738) #34 Oxtr (MGP_SPRETEiJ_G0029739) #35 Rad18 (MGP_SPRETEiJ_G0029740) #36 Srgap3 (MGP_SPRETEiJ_G0029741) #37 Thumpd3 (MGP_SPRETEiJ_G0029742) Setd5 (MGP_SPRETEiJ_G0029743) Lhfpl4 (MGP_SPRETEiJ_G0029744) Steppe mouse MODERN SPECIES 2978 ENSMSIG00000009208 #22 Sumf1 (ENSMSIG00000009243) #23 Itpr1 (ENSMSIG00000009395) #24 Bhlhe40 (ENSMSIG00000009908) #26 Arl8b (ENSMSIG00000009944) #27 Edem1 (ENSMSIG00000010010) #28 ENSMSIG00000010037 Ryukyu mouse MODERN SPECIES 15 Gpr27 (MGP_CAROLIEiJ_G0028686) Prok2 (MGP_CAROLIEiJ_G0028687) Rybp (MGP_CAROLIEiJ_G0028688) Shq1 (MGP_CAROLIEiJ_G0028689) #7 Gxylt2 (MGP_CAROLIEiJ_G0028690) #9 Ppp4r2 (MGP_CAROLIEiJ_G0028691) #10 Pdzrn3 (MGP_CAROLIEiJ_G0028692) #11 Cntn3 (MGP_CAROLIEiJ_G0028693) #12 Chl1 (MGP_CAROLIEiJ_G0028694) #13 Cntn6 (MGP_CAROLIEiJ_G0028695) #16 Cntn4 (MGP_CAROLIEiJ_G0028696) #17 Il5ra (MGP_CAROLIEiJ_G0028697) #18 Trnt1 (MGP_CAROLIEiJ_G0028698) #19 Crbn (MGP_CAROLIEiJ_G0028699) #20 Lrrn1 (MGP_CAROLIEiJ_G0028700) #21 Setmar (MGP_CAROLIEiJ_G0028701) #22 Sumf1 (MGP_CAROLIEiJ_G0028702) #23 Itpr1 (MGP_CAROLIEiJ_G0028703) #24 Bhlhe40 (MGP_CAROLIEiJ_G0028704) #26 Arl8b (MGP_CAROLIEiJ_G0028705) #27 Edem1 (MGP_CAROLIEiJ_G0028706) #28 Grm7 (MGP_CAROLIEiJ_G0028707) #29 Lmcd1 (MGP_CAROLIEiJ_G0028708) #32 Ssu2 (MGP_CAROLIEiJ_G0028709) #33 Cav3 (MGP_CAROLIEiJ_G0028710) #34 Oxtr (MGP_CAROLIEiJ_G0028711) #35 Rad18 (MGP_CAROLIEiJ_G0028712) #36 Srgap3 (MGP_CAROLIEiJ_G0028713) #37 MGP_CAROLIEiJ_G0028714 Setd5 (MGP_CAROLIEiJ_G0028715) Lhfpl4 (MGP_CAROLIEiJ_G0028716) Shrew mouse MODERN SPECIES 11 Gpr27 (MGP_PahariEiJ_G0022437) Prok2 (MGP_PahariEiJ_G0022438) Rybp (MGP_PahariEiJ_G0022439) Shq1 (MGP_PahariEiJ_G0022440) #7 Gxylt2 (MGP_PahariEiJ_G0022441) #9 Ppp4r2 (MGP_PahariEiJ_G0022442) #10 Pdzrn3 (MGP_PahariEiJ_G0022443) #11 Cntn3 (MGP_PahariEiJ_G0022444) #12 Chl1 (MGP_PahariEiJ_G0022445) #13 Cntn6 (MGP_PahariEiJ_G0022446) #16 MGP_PahariEiJ_G0022447 #17 Il5ra (MGP_PahariEiJ_G0022448) #18 Trnt1 (MGP_PahariEiJ_G0022449) #19 Crbn (MGP_PahariEiJ_G0022450) #20 Lrrn1 (MGP_PahariEiJ_G0022451) #21 Setmar (MGP_PahariEiJ_G0022452) #22 Sumf1 (MGP_PahariEiJ_G0022453) #23 Itpr1 (MGP_PahariEiJ_G0022454) #24 Bhlhe40 (MGP_PahariEiJ_G0022455) #26 Arl8b (MGP_PahariEiJ_G0022456) #27 Edem1 (MGP_PahariEiJ_G0022457) #28 Grm7 (MGP_PahariEiJ_G0022458) #29 Lmcd1 (MGP_PahariEiJ_G0022459) #32 Ssu2 (MGP_PahariEiJ_G0022460) #33 Cav3 (MGP_PahariEiJ_G0022461) #34 Oxtr (MGP_PahariEiJ_G0022462) #35 Rad18 (MGP_PahariEiJ_G0022463) #36 Srgap3 (MGP_PahariEiJ_G0022464) #37 Thumpd3 (MGP_PahariEiJ_G0022465) Setd5 (MGP_PahariEiJ_G0022466) Lhfpl4 (MGP_PahariEiJ_G0022467) Cricetidae ANCESTRAL SPECIES 3 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00960000189964 #25 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Cricetinae ANCESTRAL SPECIES 8 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Golden Hamster MODERN SPECIES 622 Virma (ENSMAUG00000007195) Fsbp (ENSMAUG00000021489) Rad54b (ENSMAUG00000013586) Gem (ENSMAUG00000006962) Cdh17 (ENSMAUG00000009983) Tmem67 (ENSMAUG00000001046) ENSMAUG00000021752 Cibar1 (ENSMAUG00000009551) Triqk (ENSMAUG00000012998) Cntn4 (ENSMAUG00000009508) #17 Il5ra (ENSMAUG00000021101) #18 Trnt1 (ENSMAUG00000020707) #19 Crbn (ENSMAUG00000001100) #20 Lrrn1 (ENSMAUG00000005827) #21 ENSMAUG00000009893 Setmar (ENSMAUG00000020081) #22 Sumf1 (ENSMAUG00000014146) #23 Itpr1 (ENSMAUG00000016842) #24 Bhlhe40 (ENSMAUG00000009803) #26 Arl8b (ENSMAUG00000016691) #27 Edem1 (ENSMAUG00000008525) #28 ENSMAUG00000019900 Grm7 (ENSMAUG00000021392) #29 Lmcd1 (ENSMAUG00000014020) #32 Ssu2 (ENSMAUG00000020801) #33 Cav3 (ENSMAUG00000019157) #34 Oxtr (ENSMAUG00000020582) #35 Rad18 (ENSMAUG00000020642) #36 Srgap3 (ENSMAUG00000020606) #37 Thumpd3 (ENSMAUG00000012250) Setd5 (ENSMAUG00000016093) Chinese hamster chok1gshd MODERN SPECIES 144 Gxylt2 (ENSCGRG00001012822) #9 Ppp4r2 (ENSCGRG00001010724) #10 Pdzrn3 (ENSCGRG00001017365) #11 ENSCGRG00001003940 Cntn3 (ENSCGRG00001013551) #12 ENSCGRG00001015607 ENSCGRG00001015306 Chl1 (ENSCGRG00001021609) #13 Cntn6 (ENSCGRG00001012547) #16 Cntn4 (ENSCGRG00001005552) #17 Il5ra (ENSCGRG00001023890) #18 Trnt1 (ENSCGRG00001009998) #19 Crbn (ENSCGRG00001014850) #20 Lrrn1 (ENSCGRG00001000760) #21 ENSCGRG00001003904 Setmar (ENSCGRG00001005415) #22 Sumf1 (ENSCGRG00001010527) #23 Itpr1 (ENSCGRG00001019657) #24 Bhlhe40 (ENSCGRG00001015526) #26 Arl8b (ENSCGRG00001018115) #27 Edem1 (ENSCGRG00001020705) #28 ENSCGRG00001023368 Grm7 (ENSCGRG00001005305) #29 Lmcd1 (ENSCGRG00001009463) #32 Ssu2 (ENSCGRG00001012512) #33 Cav3 (ENSCGRG00001014266) #34 Oxtr (ENSCGRG00001014988) #35 ENSCGRG00001015311 ENSCGRG00001018154 #36 ENSCGRG00001021718 Srgap3 (ENSCGRG00001010935) #37 Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00960000189964 #25 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000026210 Prok2 (ENSPEMG00000030947) ENSPEMG00000028366 ENSPEMG00000017621 Shq1 (ENSPEMG00000000251) #7 Gxylt2 (ENSPEMG00000005596) #9 Pdzrn3 (ENSPEMG00000019769) #11 Cntn3 (ENSPEMG00000014200) #12 Chl1 (ENSPEMG00000023675) #13 Cntn6 (ENSPEMG00000019384) #16 Cntn4 (ENSPEMG00000020085) #17 Il5ra (ENSPEMG00000000193) #18 Trnt1 (ENSPEMG00000019845) #19 Crbn (ENSPEMG00000020177) #20 Lrrn1 (ENSPEMG00000019903) #21 Setmar (ENSPEMG00000023423) #22 Sumf1 (ENSPEMG00000012549) #23 Itpr1 (ENSPEMG00000018533) #24 ENSPEMG00000025770 #25 Bhlhe40 (ENSPEMG00000028508) #26 Arl8b (ENSPEMG00000029131) #27 Edem1 (ENSPEMG00000005304) #28 Grm7 (ENSPEMG00000029693) #29 Lmcd1 (ENSPEMG00000013048) #32 Ssu2 (ENSPEMG00000022560) #33 Cav3 (ENSPEMG00000029098) #34 Oxtr (ENSPEMG00000027376) #35 Rad18 (ENSPEMG00000022129) #36 Srgap3 (ENSPEMG00000022268) #37 Thumpd3 (ENSPEMG00000022411) Setd5 (ENSPEMG00000022422) Prairie vole MODERN SPECIES 84 ENSMOCG00000000955 Pdzrn3 (ENSMOCG00000015544) #11 ENSMOCG00000009808 Cntn3 (ENSMOCG00000007453) #12 ENSMOCG00000021562 ENSMOCG00000002512 #13 ENSMOCG00000020899 #13 ENSMOCG00000016932 ENSMOCG00000009333 Cntn6 (ENSMOCG00000005399) #16 Cntn4 (ENSMOCG00000013257) #17 Il5ra (ENSMOCG00000015311) #18 Trnt1 (ENSMOCG00000004539) #19 Crbn (ENSMOCG00000019318) #20 Lrrn1 (ENSMOCG00000001702) #21 Setmar (ENSMOCG00000003026) #22 Sumf1 (ENSMOCG00000014598) #23 Itpr1 (ENSMOCG00000002247) #24 Bhlhe40 (ENSMOCG00000014385) #26 Arl8b (ENSMOCG00000018769) #27 Edem1 (ENSMOCG00000020129) #28 ENSMOCG00000009387 ENSMOCG00000016285 ENSMOCG00000020138 Grm7 (ENSMOCG00000016029) #29 Lmcd1 (ENSMOCG00000013328) #32 Ssu2 (ENSMOCG00000006487) #33 Cav3 (ENSMOCG00000002186) #34 OXTR (ENSMOCG00000002867) #35 Rad18 (ENSMOCG00000009114) #36 Srgap3 (ENSMOCG00000001918) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1692 ENSNGAG00000000188 Cntn4 (ENSNGAG00000000209) #17 Il5ra (ENSNGAG00000008379) #18 Trnt1 (ENSNGAG00000000537) #19 Crbn (ENSNGAG00000005594) #20 ENSNGAG00000016208 Lrrn1 (ENSNGAG00000000839) #21 Setmar (ENSNGAG00000012182) #22 Sumf1 (ENSNGAG00000015609) #23 Itpr1 (ENSNGAG00000010432) #24 Bhlhe40 (ENSNGAG00000000305) #26 Arl8b (ENSNGAG00000012594) #27 Edem1 (ENSNGAG00000017076) #28 Lesser Egyptian jerboa MODERN SPECIES 45 Gxylt2 (ENSJJAG00000013774) #9 ENSJJAG00000022712 Pdzrn3 (ENSJJAG00000000291) #11 Cntn3 (ENSJJAG00000012448) #12 ENSJJAG00000000622 Chl1 (ENSJJAG00000020689) #13 ENSJJAG00000017679 Cntn6 (ENSJJAG00000013679) #16 ENSJJAG00000010075 Cntn4 (ENSJJAG00000023102) #17 Il5ra (ENSJJAG00000010396) #18 Trnt1 (ENSJJAG00000018561) #19 Crbn (ENSJJAG00000011234) #20 ENSJJAG00000004639 Lrrn1 (ENSJJAG00000021670) #21 Setmar (ENSJJAG00000024359) #22 Sumf1 (ENSJJAG00000014950) #23 Itpr1 (ENSJJAG00000021325) #24 ENSJJAG00000015303 ENSJJAG00000022672 #26 Arl8b (ENSJJAG00000017608) #27 Edem1 (ENSJJAG00000007371) #28 ENSJJAG00000015222 ENSJJAG00000017538 Grm7 (ENSJJAG00000023200) #29 ENSJJAG00000016367 Lmcd1 (ENSJJAG00000016825) #32 Ssu2 (ENSJJAG00000023516) #33 Cav3 (ENSJJAG00000024313) #34 Oxtr (ENSJJAG00000016459) #35 ENSJJAG00000021410 Kangaroo rat MODERN SPECIES 331 Eif4e3 (ENSDORG00000006531) Prok2 (ENSDORG00000006150) Rybp (ENSDORG00000015021) ENSDORG00000029850 #7 Gxylt2 (ENSDORG00000010918) #9 ENSDORG00000023761 #10 Pdzrn3 (ENSDORG00000002686) #11 Cntn3 (ENSDORG00000000121) #12 Chl1 (ENSDORG00000010546) #13 Cntn6 (ENSDORG00000005702) #16 Cntn4 (ENSDORG00000014028) #17 Il5ra (ENSDORG00000014033) #18 Trnt1 (ENSDORG00000014035) #19 Crbn (ENSDORG00000014038) #20 Lrrn1 (ENSDORG00000023814) #21 Setmar (ENSDORG00000026212) #22 Sumf1 (ENSDORG00000006695) #23 Itpr1 (ENSDORG00000005966) #24 Bhlhe40 (ENSDORG00000028127) #26 Arl8b (ENSDORG00000023904) #27 Edem1 (ENSDORG00000002004) #28 Grm7 (ENSDORG00000007450) #29 Lmcd1 (ENSDORG00000003932) #32 Ssu2 (ENSDORG00000009888) #33 Cav3 (ENSDORG00000023359) #34 Oxtr (ENSDORG00000007711) #35 ENSDORG00000029722 Rad18 (ENSDORG00000001099) #36 ENSDORG00000001101 #37 Thumpd3 (ENSDORG00000003257) Setd5 (ENSDORG00000003260) Rodentia_A ANCESTRAL SPECIES 27 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Hystricomorpha ANCESTRAL SPECIES 34 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 Hystricomorpha_a ANCESTRAL SPECIES 45 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 Hystricomorpha_b ANCESTRAL SPECIES 42 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 Long-tailed chinchilla MODERN SPECIES 128 EIF4E3 (ENSCLAG00000003818) PROK2 (ENSCLAG00000003618) RYBP (ENSCLAG00000006008) SHQ1 (ENSCLAG00000004206) #7 GXYLT2 (ENSCLAG00000003908) #9 PPP4R2 (ENSCLAG00000003231) PDZRN3 (ENSCLAG00000010964) #11 CNTN3 (ENSCLAG00000009614) #12 CHL1 (ENSCLAG00000006459) #13 CNTN6 (ENSCLAG00000008602) #16 CNTN4 (ENSCLAG00000006463) #17 IL5RA (ENSCLAG00000005656) #18 TRNT1 (ENSCLAG00000005186) #19 CRBN (ENSCLAG00000004930) #20 LRRN1 (ENSCLAG00000004896) #21 ENSCLAG00000005640 #22 SUMF1 (ENSCLAG00000004509) #23 ITPR1 (ENSCLAG00000009445) #24 BHLHE40 (ENSCLAG00000003841) #26 ARL8B (ENSCLAG00000003184) #27 EDEM1 (ENSCLAG00000004922) #28 GRM7 (ENSCLAG00000004216) #29 ENSCLAG00000003666 SLC22A14 (ENSCLAG00000003320) ENSCLAG00000003124 DLEC1 (ENSCLAG00000006229) PLCD1 (ENSCLAG00000005079) VILL (ENSCLAG00000005376) CTDSPL (ENSCLAG00000004547) ITGA9 (ENSCLAG00000004058) GOLGA4 (ENSCLAG00000005913) Degu MODERN SPECIES 71 ENSODEG00000006984 PDZRN3 (ENSODEG00000008618) #11 CNTN3 (ENSODEG00000006512) #12 ENSODEG00000019392 CHL1 (ENSODEG00000010169) #13 ENSODEG00000019383 ENSODEG00000007284 CNTN6 (ENSODEG00000006499) #16 CNTN4 (ENSODEG00000007155) #17 IL5RA (ENSODEG00000006715) #18 TRNT1 (ENSODEG00000007597) #19 ENSODEG00000008720 #20 ENSODEG00000006737 LRRN1 (ENSODEG00000007430) #21 ENSODEG00000007585 ENSODEG00000006593 #22 SUMF1 (ENSODEG00000007677) #23 ITPR1 (ENSODEG00000007250) #24 ENSODEG00000008843 #26 ARL8B (ENSODEG00000009293) #27 EDEM1 (ENSODEG00000009933) #28 ENSODEG00000019586 Guinea pig MODERN SPECIES 16 PROK2 (ENSCPOG00000033908) RYBP (ENSCPOG00000032177) SHQ1 (ENSCPOG00000011443) #7 GXYLT2 (ENSCPOG00000000442) #9 ENSCPOG00000030150 PPP4R2 (ENSCPOG00000036245) PDZRN3 (ENSCPOG00000030488) #11 CNTN3 (ENSCPOG00000003218) #12 CHL1 (ENSCPOG00000014986) #13 CNTN6 (ENSCPOG00000001124) #16 CNTN4 (ENSCPOG00000026863) #17 Il5ra (ENSCPOG00000007845) #18 TRNT1 (ENSCPOG00000007849) #19 CRBN (ENSCPOG00000007851) #20 LRRN1 (ENSCPOG00000006583) #21 ENSCPOG00000019854 #22 SUMF1 (ENSCPOG00000014854) #23 ITPR1 (ENSCPOG00000005053) #24 BHLHE40 (ENSCPOG00000004014) #26 ENSCPOG00000002434 ENSCPOG00000020709 ARL8B (ENSCPOG00000031098) #27 EDEM1 (ENSCPOG00000031536) #28 GRM7 (ENSCPOG00000001886) #29 DLEC1 (ENSCPOG00000008859) PLCD1 (ENSCPOG00000000596) VILL (ENSCPOG00000029985) CTDSPL (ENSCPOG00000000592) ITGA9 (ENSCPOG00000014650) GOLGA4 (ENSCPOG00000008525) LRRFIP2 (ENSCPOG00000038703) Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000041034 ENSHGLG00000038372 ENSHGLG00000003660 ENSHGLG00000032578 ENSHGLG00000002080 #12 ENSHGLG00000042664 ENSHGLG00000003621 #13 CNTN6 (ENSHGLG00000003847) #16 ENSHGLG00000038160 CNTN4 (ENSHGLG00000006279) #17 IL5RA (ENSHGLG00000003211) #18 ENSHGLG00000003649 #19 CRBN (ENSHGLG00000003957) #20 ENSHGLG00000002667 LRRN1 (ENSHGLG00000002701) #21 ENSHGLG00000049868 #22 ENSHGLG00000003230 #23 ENSHGLG00000004549 #24 ENSHGLG00000003679 #26 ENSHGLG00000033324 ENSHGLG00000048183 ENSHGLG00000042322 ENSHGLG00000039470 ENSHGLG00000002002 ENSHGLG00000001846 #27 ENSHGLG00000002073 #28 ENSHGLG00000050895 ENSHGLG00000044283 ENSHGLG00000042623 ENSHGLG00000046070 ENSHGLG00000040264 Sciuridae ANCESTRAL SPECIES 41 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Eurasian red squirrel MODERN SPECIES 10 RYBP (ENSSVLG00005010589) SHQ1 (ENSSVLG00005010502) #7 GXYLT2 (ENSSVLG00005010448) #9 ENSSVLG00005010375 PDZRN3 (ENSSVLG00005010337) #11 ENSSVLG00005010270 CNTN3 (ENSSVLG00005025887) #12 CHL1 (ENSSVLG00005025877) #13 CNTN6 (ENSSVLG00005025861) #16 CNTN4 (ENSSVLG00005025842) #17 IL5RA (ENSSVLG00005025823) #18 TRNT1 (ENSSVLG00005025808) #19 CRBN (ENSSVLG00005025805) #20 ENSSVLG00005025803 LRRN1 (ENSSVLG00005025801) #21 ENSSVLG00005025798 #22 SUMF1 (ENSSVLG00005025792) #23 ITPR1 (ENSSVLG00005025774) #24 BHLHE40 (ENSSVLG00005025741) #26 ENSSVLG00005025728 ARL8B (ENSSVLG00005025718) #27 EDEM1 (ENSSVLG00005025704) #28 ENSSVLG00005025696 ENSSVLG00005025690 ENSSVLG00005025685 GRM7 (ENSSVLG00005025662) #29 LMCD1 (ENSSVLG00005025633) #32 SSUH2 (ENSSVLG00005025613) #33 CAV3 (ENSSVLG00005025604) #34 OXTR (ENSSVLG00005025596) #35 RAD18 (ENSSVLG00005025578) #36 Marmotini ANCESTRAL SPECIES 49 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Marmotini_b ANCESTRAL SPECIES 62 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Arctic ground squirrel MODERN SPECIES 23 CNTN4 (ENSUPAG00010022747) #17 IL5RA (ENSUPAG00010022771) #18 TRNT1 (ENSUPAG00010022775) #19 CRBN (ENSUPAG00010022777) #20 LRRN1 (ENSUPAG00010022779) #21 ENSUPAG00010022780 #22 SUMF1 (ENSUPAG00010022782) #23 ITPR1 (ENSUPAG00010022789) #24 BHLHE40 (ENSUPAG00010022838) #26 ARL8B (ENSUPAG00010022842) #27 EDEM1 (ENSUPAG00010022843) #28 GRM7 (ENSUPAG00010022847) #29 ENSUPAG00010022848 LMCD1 (ENSUPAG00010022849) #32 SSUH2 (ENSUPAG00010022850) #33 CAV3 (ENSUPAG00010022852) #34 OXTR (ENSUPAG00010022853) #35 RAD18 (ENSUPAG00010022854) #36 SRGAP3 (ENSUPAG00010022863) #37 THUMPD3 (ENSUPAG00010022869) SETD5 (ENSUPAG00010022873) Squirrel MODERN SPECIES 177 CHL1 (ENSSTOG00000003470) #13 CNTN6 (ENSSTOG00000010495) #16 CNTN4 (ENSSTOG00000000147) #17 IL5RA (ENSSTOG00000007367) #18 TRNT1 (ENSSTOG00000000150) #19 CRBN (ENSSTOG00000028102) #20 LRRN1 (ENSSTOG00000020406) #21 ENSSTOG00000025520 #22 SUMF1 (ENSSTOG00000022603) #23 ITPR1 (ENSSTOG00000012015) #24 BHLHE40 (ENSSTOG00000000793) #26 ARL8B (ENSSTOG00000009294) #27 EDEM1 (ENSSTOG00000009304) #28 ENSSTOG00000024514 #29 Alpin marmot MODERN SPECIES 40 ENSMMMG00000006861 PROK2 (ENSMMMG00000006869) RYBP (ENSMMMG00000006873) SHQ1 (ENSMMMG00000006887) #7 GXYLT2 (ENSMMMG00000006933) #9 ENSMMMG00000006977 #10 PDZRN3 (ENSMMMG00000006989) #11 CNTN3 (ENSMMMG00000007027) #12 CHL1 (ENSMMMG00000007097) #13 CNTN6 (ENSMMMG00000007205) #16 CNTN4 (ENSMMMG00000007297) #17 IL5RA (ENSMMMG00000007442) #18 TRNT1 (ENSMMMG00000007463) #19 CRBN (ENSMMMG00000007485) #20 LRRN1 (ENSMMMG00000007534) #21 ENSMMMG00000007561 #22 SUMF1 (ENSMMMG00000007589) #23 ITPR1 (ENSMMMG00000007640) #24 BHLHE40 (ENSMMMG00000007823) #26 ARL8B (ENSMMMG00000007850) #27 EDEM1 (ENSMMMG00000007881) #28 GRM7 (ENSMMMG00000008319) #29 LMCD1 (ENSMMMG00000008370) #32 SSUH2 (ENSMMMG00000008390) #33 CAV3 (ENSMMMG00000008414) #34 OXTR (ENSMMMG00000008417) #35 RAD18 (ENSMMMG00000008426) #36 SRGAP3 (ENSMMMG00000008489) #37 THUMPD3 (ENSMMMG00000008539) SETD5 (ENSMMMG00000008559) LHFPL4 (ENSMMMG00000008628) Lagomorpha ANCESTRAL SPECIES 169 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 Rabbit MODERN SPECIES 436 ENSOCUG00000023199 CHL1 (ENSOCUG00000004486) #13 ENSOCUG00000037666 CNTN6 (ENSOCUG00000012763) #16 CNTN4 (ENSOCUG00000011025) #17 ENSOCUG00000015601 #18 TRNT1 (ENSOCUG00000008580) #19 CRBN (ENSOCUG00000025795) #20 LRRN1 (ENSOCUG00000023697) #21 ENSOCUG00000036915 ENSOCUG00000036153 ENSOCUG00000026652 #22 SUMF1 (ENSOCUG00000012348) #23 ITPR1 (ENSOCUG00000012148) #24 ENSOCUG00000015177 #26 ENSOCUG00000014090 #27 EDEM1 (ENSOCUG00000014098) #28 ENSOCUG00000039475 #29 GRM7 (ENSOCUG00000017426) #29 ENSOCUG00000024911 LMCD1 (ENSOCUG00000010136) #32 SSUH2 (ENSOCUG00000014613) #33 CAV3 (ENSOCUG00000005950) #34 RAD18 (ENSOCUG00000000013) #36 Primates ANCESTRAL SPECIES 1 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Lemuriformes ANCESTRAL SPECIES 73 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 Mouse lemur MODERN SPECIES 18 KIAA1191 (ENSMICG00000037293) ENSMICG00000036088 SIMC1 (ENSMICG00000015305) ENSMICG00000028441 CPLX2 (ENSMICG00000047802) HRH2 (ENSMICG00000003318) ENSMICG00000030242 DRD1 (ENSMICG00000042729) GRM7 (ENSMICG00000010596) #29 CNTN4 (ENSMICG00000016581) #17 IL5RA (ENSMICG00000046178) #18 TRNT1 (ENSMICG00000016615) #19 CRBN (ENSMICG00000016619) #20 LRRN1 (ENSMICG00000038690) #21 ENSMICG00000030917 ENSMICG00000032203 #22 SUMF1 (ENSMICG00000016631) #23 ITPR1 (ENSMICG00000004656) ##24 BHLHE40 (ENSMICG00000043220) #26 ENSMICG00000029477 #27 EDEM1 (ENSMICG00000000246) #28 Lemuriformes_a ANCESTRAL SPECIES 122 ENSGT00390000018596.A.a.a ENSGT00390000005596 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00730000111360 ENSGT00390000005780.b ENSGT00390000016970 ENSGT00390000000631 ENSGT00390000011082 ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 700 ENSPSMG00000004944 NBEAL2 (ENSPSMG00000004931) CCDC12 (ENSPSMG00000004882) PTH1R (ENSPSMG00000004789) MYL3 (ENSPSMG00000004712) ENSPSMG00000004697 ENSPSMG00000004689 ENSPSMG00000004660 ENSPSMG00000004649 PRSS50 (ENSPSMG00000004628) TMIE (ENSPSMG00000004622) ALS2CL (ENSPSMG00000004599) FAM240A (ENSPSMG00000004513) LRRC2 (ENSPSMG00000004505) RTP3 (ENSPSMG00000004488) ENSPSMG00000004468 #22 POMGNT2 (ENSPSMG00000004465) Greater bamboo lemur MODERN SPECIES 1330 ENSPSMG00000008526 #22 ENSPSMG00000008535 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 466 ACTR3 (ENSPCOG00000024400) SLC35F5 (ENSPCOG00000028424) GPR39 (ENSPCOG00000023485) LYPD1 (ENSPCOG00000020233) ENSPCOG00000014180 #22 NCKAP5 (ENSPCOG00000015437) MGAT5 (ENSPCOG00000019388) TMEM163 (ENSPCOG00000003562) ACMSD (ENSPCOG00000009868) CCNT2 (ENSPCOG00000024166) MAP3K19 (ENSPCOG00000013448) RAB3GAP1 (ENSPCOG00000013566) ENSPCOG00000017303 ZRANB3 (ENSPCOG00000003732) R3HDM1 (ENSPCOG00000012698) UBXN4 (ENSPCOG00000023917) LCT (ENSPCOG00000025001) MCM6 (ENSPCOG00000019502) DARS1 (ENSPCOG00000008377) CXCR4 (ENSPCOG00000024213) Coquerels sifaka MODERN SPECIES 78 RPUSD3 (ENSPCOG00000018314) CIDEC (ENSPCOG00000022675) JAGN1 (ENSPCOG00000023783) IL17RE (ENSPCOG00000020006) IL17RC (ENSPCOG00000021923) CRELD1 (ENSPCOG00000025122) PRRT3 (ENSPCOG00000015921) EMC3 (ENSPCOG00000026029) FANCD2 (ENSPCOG00000014162) BRK1 (ENSPCOG00000020671) VHL (ENSPCOG00000019013) IRAK2 (ENSPCOG00000021515) TATDN2 (ENSPCOG00000025647) GHRL (ENSPCOG00000026754) SEC13 (ENSPCOG00000008292) ENSPCOG00000019692 #22 SUMF1 (ENSPCOG00000014210) #23 ITPR1 (ENSPCOG00000024735) #24 BHLHE40 (ENSPCOG00000013862) #26 ARL8B (ENSPCOG00000013027) #27 EDEM1 (ENSPCOG00000022489) #28 Bushbaby MODERN SPECIES 130 ENSOGAG00000033425 ENSOGAG00000030955 SHQ1 (ENSOGAG00000003898) #7 GXYLT2 (ENSOGAG00000006647) #9 PPP4R2 (ENSOGAG00000011001) PDZRN3 (ENSOGAG00000031641) #11 CNTN3 (ENSOGAG00000017171) #12 CHL1 (ENSOGAG00000012057) #13 CNTN6 (ENSOGAG00000002731) #16 CNTN4 (ENSOGAG00000007059) #17 IL5RA (ENSOGAG00000007069) #18 CRBN (ENSOGAG00000007077) #20 ENSOGAG00000033945 ENSOGAG00000030861 LRRN1 (ENSOGAG00000027599) #21 ENSOGAG00000024973 #22 SUMF1 (ENSOGAG00000003702) #23 ITPR1 (ENSOGAG00000003704) #24 BHLHE40 (ENSOGAG00000029762) #26 ARL8B (ENSOGAG00000026863) #27 EDEM1 (ENSOGAG00000003714) #28 ENSOGAG00000025402 ENSOGAG00000034686 #29 ENSOGAG00000025792 GRM7 (ENSOGAG00000004355) #29 ENSOGAG00000027930 LMCD1 (ENSOGAG00000009965) #32 SSUH2 (ENSOGAG00000009967) #33 ENSOGAG00000032668 ENSOGAG00000027853 CAV3 (ENSOGAG00000027025) #34 Haplorrhini ANCESTRAL SPECIES ENSGT00940000162663 #22 Tarsier MODERN SPECIES 4464 ENSTSYG00000026622 #22 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Cetacea ANCESTRAL SPECIES 7 ENSGT00390000013995.b.a ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Odontoceti ANCESTRAL SPECIES 5 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000168733 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Monodontidae ANCESTRAL SPECIES 4 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000168733 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00940000154194.kb.b ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Narwhal MODERN SPECIES 310 PPP4R2 (ENSMMNG00015020763) ENSMMNG00015020797 PDZRN3 (ENSMMNG00015020829) #11 ENSMMNG00015020925 ENSMMNG00015020932 CNTN3 (ENSMMNG00015020954) #12 ENSMMNG00015020993 CHL1 (ENSMMNG00015021112) #13 CNTN6 (ENSMMNG00015021308) #16 ENSMMNG00015021339 CNTN4 (ENSMMNG00015021354) #17 IL5RA (ENSMMNG00015021373) #18 TRNT1 (ENSMMNG00015021404) #19 CRBN (ENSMMNG00015021425) #20 LRRN1 (ENSMMNG00015021441) #21 ENSMMNG00015021455 #22 SUMF1 (ENSMMNG00015021480) #23 ITPR1 (ENSMMNG00015021764) #24 BHLHE40 (ENSMMNG00015021940) #26 EDEM1 (ENSMMNG00015021945) #28 ENSMMNG00015021948 GRM7 (ENSMMNG00015021949) #29 ENSMMNG00015021951 LMCD1 (ENSMMNG00015021953) #32 SSUH2 (ENSMMNG00015021955) #33 CAV3 (ENSMMNG00015021970) #34 OXTR (ENSMMNG00015021973) #35 RAD18 (ENSMMNG00015021977) #36 SRGAP3 (ENSMMNG00015021982) #37 THUMPD3 (ENSMMNG00015021984) SETD5 (ENSMMNG00015009941) Beluga whale MODERN SPECIES 28 SHQ1 (ENSDLEG00000007662) #7 PPP4R2 (ENSDLEG00000007632) #9 ENSDLEG00000007621 PDZRN3 (ENSDLEG00000007615) #11 ENSDLEG00000007610 CNTN3 (ENSDLEG00000007338) #12 ENSDLEG00000007271 CHL1 (ENSDLEG00000007131) #13 CNTN6 (ENSDLEG00000004824) #16 ENSDLEG00000004457 CNTN4 (ENSDLEG00000004410) #17 IL5RA (ENSDLEG00000004345) #18 TRNT1 (ENSDLEG00000004312) #19 CRBN (ENSDLEG00000004288) #20 LRRN1 (ENSDLEG00000004270) #21 ENSDLEG00000004264 #22 SUMF1 (ENSDLEG00000004213) #23 ITPR1 (ENSDLEG00000003511) #24 BHLHE40 (ENSDLEG00000003345) #26 ARL8B (ENSDLEG00000003337) #27 EDEM1 (ENSDLEG00000003247) #28 ENSDLEG00000003215 Vaquita MODERN SPECIES 2 GXYLT2 (ENSPSNG00000022011) #9 PPP4R2 (ENSPSNG00000021989) ENSPSNG00000021970 PDZRN3 (ENSPSNG00000021932) #11 ENSPSNG00000021907 CNTN3 (ENSPSNG00000021869) #12 ENSPSNG00000021840 CHL1 (ENSPSNG00000021694) #13 CNTN6 (ENSPSNG00000021579) #16 ENSPSNG00000021554 CNTN4 (ENSPSNG00000021522) #17 IL5RA (ENSPSNG00000021430) #18 TRNT1 (ENSPSNG00000021385) #19 CRBN (ENSPSNG00000021316) #20 LRRN1 (ENSPSNG00000021271) #21 ENSPSNG00000021260 #22 SUMF1 (ENSPSNG00000021203) #23 ITPR1 (ENSPSNG00000020755) #24 BHLHE40 (ENSPSNG00000020577) #26 ARL8B (ENSPSNG00000020515) #27 EDEM1 (ENSPSNG00000020473) #28 ENSPSNG00000020429 ENSPSNG00000020416 GRM7 (ENSPSNG00000020266) #29 LMCD1 (ENSPSNG00000020193) #32 SSUH2 (ENSPSNG00000020116) #33 CAV3 (ENSPSNG00000020071) #34 OXTR (ENSPSNG00000020047) #35 RAD18 (ENSPSNG00000019957) #36 SRGAP3 (ENSPSNG00000019609) #37 THUMPD3 (ENSPSNG00000019527) Sperm whale MODERN SPECIES 9 PPP4R2 (ENSPCTG00005017140) ENSPCTG00005017126 ENSPCTG00005017078 PDZRN3 (ENSPCTG00005016884) #11 ENSPCTG00005016762 CNTN3 (ENSPCTG00005016649) #12 ENSPCTG00005016580 CHL1 (ENSPCTG00005016433) #13 ENSPCTG00005016393 CNTN6 (ENSPCTG00005016124) #16 CNTN4 (ENSPCTG00005011901) #17 IL5RA (ENSPCTG00005011305) #18 TRNT1 (ENSPCTG00005011251) #19 CRBN (ENSPCTG00005011120) #20 LRRN1 (ENSPCTG00005011097) #21 ENSPCTG00005011064 #22 SUMF1 (ENSPCTG00005010949) #23 ENSPCTG00005010893 #24 BHLHE40 (ENSPCTG00005010857) #26 ARL8B (ENSPCTG00005010834) #27 EDEM1 (ENSPCTG00005010722) #28 ENSPCTG00005010694 ENSPCTG00005010665 GRM7 (ENSPCTG00005010372) #29 ENSPCTG00005010301 ENSPCTG00005010267 #34 CAV3 (ENSPCTG00005010229) #34 OXTR (ENSPCTG00005010180) #35 RAD18 (ENSPCTG00005009968) #36 THUMPD3 (ENSPCTG00005009829) SETD5 (ENSPCTG00005009250) Blue whale MODERN SPECIES 2 SHQ1 (ENSBMSG00010021956) #7 GXYLT2 (ENSBMSG00010021967) #9 PPP4R2 (ENSBMSG00010021970) PDZRN3 (ENSBMSG00010021981) #11 ENSBMSG00010021985 ENSBMSG00010021989 CNTN3 (ENSBMSG00010021994) #12 ENSBMSG00010022002 CHL1 (ENSBMSG00010022027) #13 CNTN6 (ENSBMSG00010022054) #16 CNTN4 (ENSBMSG00010022067) #17 IL5RA (ENSBMSG00010022077) #18 TRNT1 (ENSBMSG00010022089) #19 CRBN (ENSBMSG00010022093) #20 LRRN1 (ENSBMSG00010022098) #21 ENSBMSG00010022101 #22 SUMF1 (ENSBMSG00010022107) #23 ENSBMSG00010022122 #24 BHLHE40 (ENSBMSG00010022124) #26 ARL8B (ENSBMSG00010022125) #27 EDEM1 (ENSBMSG00010022127) #28 GRM7 (ENSBMSG00010022139) #29 ENSBMSG00010022144 LMCD1 (ENSBMSG00010022145) #32 SSUH2 (ENSBMSG00010022152) #33 CAV3 (ENSBMSG00010022159) #34 OXTR (ENSBMSG00010022161) #35 RAD18 (ENSBMSG00010022168) #36 SRGAP3 (ENSBMSG00010022181) #37 THUMPD3 (ENSBMSG00010022188) SETD5 (ENSBMSG00010022193) Pecora ANCESTRAL SPECIES 17 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Yarkand deer MODERN SPECIES 16 GXYLT2 (ENSCHYG00000026357) #9 PPP4R2 (ENSCHYG00000026369) PDZRN3 (ENSCHYG00000026403) #11 CNTN3 (ENSCHYG00000026470) #12 CHL1 (ENSCHYG00000026559) #13 ENSCHYG00000026610 CNTN6 (ENSCHYG00000026622) #16 ENSCHYG00000026685 ENSCHYG00000026687 CNTN4 (ENSCHYG00000026696) #17 IL5RA (ENSCHYG00000026716) #18 TRNT1 (ENSCHYG00000026731) #19 CRBN (ENSCHYG00000026738) #20 ENSCHYG00000026754 ENSCHYG00000026764 ENSCHYG00000026769 #22 SUMF1 (ENSCHYG00000026779) #23 ITPR1 (ENSCHYG00000026821) #24 BHLHE40 (ENSCHYG00000026844) #26 ARL8B (ENSCHYG00000026850) #27 EDEM1 (ENSCHYG00000026855) #28 ENSCHYG00000026863 GRM7 (ENSCHYG00000026874) #29 LMCD1 (ENSCHYG00000026896) #32 SSUH2 (ENSCHYG00000026901) #33 CAV3 (ENSCHYG00000026911) #34 OXTR (ENSCHYG00000026918) #35 RAD18 (ENSCHYG00000026923) #36 SRGAP3 (ENSCHYG00000013878) #37 THUMPD3 (ENSCHYG00000014272) SETD5 (ENSCHYG00000014430) Percora_a ANCESTRAL SPECIES 19 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Siberian musk deer MODERN SPECIES 1217 CNTN6 (ENSMMSG00000023002) #16 ENSMMSG00000023026 CNTN4 (ENSMMSG00000023037) #17 IL5RA (ENSMMSG00000023050) #18 TRNT1 (ENSMMSG00000023102) #19 CRBN (ENSMMSG00000023112) #20 LRRN1 (ENSMMSG00000023149) #21 ENSMMSG00000023154 #22 SUMF1 (ENSMMSG00000023161) #23 ITPR1 (ENSMMSG00000023236) #24 BHLHE40 (ENSMMSG00000023362) #26 ARL8B (ENSMMSG00000023368) #27 EDEM1 (ENSMMSG00000023381) #28 GRM7 (ENSMMSG00000023416) #29 ENSMMSG00000023445 LMCD1 (ENSMMSG00000023464) #32 SSUH2 (ENSMMSG00000023483) #33 CAV3 (ENSMMSG00000023491) #34 OXTR (ENSMMSG00000023495) #35 RAD18 (ENSMMSG00000023505) #36 SRGAP3 (ENSMMSG00000023532) #37 THUMPD3 (ENSMMSG00000023573) SETD5 (ENSMMSG00000023589) Bovidae ANCESTRAL SPECIES 19 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Caprinae ANCESTRAL SPECIES 15 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Rambouillet Sheep MODERN SPECIES 10 PROK2 (ENSOARG00020017771) RYBP (ENSOARG00020017720) SHQ1 (ENSOARG00020017477) #7 GXYLT2 (ENSOARG00020017381) #9 PPP4R2 (ENSOARG00020017177) PDZRN3 (ENSOARG00020016919) #11 CNTN3 (ENSOARG00020016622) #12 CHL1 (ENSOARG00020015831) #13 CNTN6 (ENSOARG00020015543) #16 ENSOARG00020015490 CNTN4 (ENSOARG00020015064) #17 TRNT1 (ENSOARG00020014826) #19 CRBN (ENSOARG00020014355) #20 ENSOARG00020014311 LRRN1 (ENSOARG00020014291) #21 ENSOARG00020014205 #22 SUMF1 (ENSOARG00020014038) #23 ITPR1 (ENSOARG00020012519) #24 BHLHE40 (ENSOARG00020012417) #26 ARL8B (ENSOARG00020012288) #27 EDEM1 (ENSOARG00020012137) #28 ENSOARG00020012075 GRM7 (ENSOARG00020011716) #29 LMCD1 (ENSOARG00020011551) #32 SSUH2 (ENSOARG00020011381) #33 CAV3 (ENSOARG00020011348) #34 OXTR (ENSOARG00020011329) #35 RAD18 (ENSOARG00020011184) #36 SRGAP3 (ENSOARG00020010228) #37 THUMPD3 (ENSOARG00020025485) SETD5 (ENSOARG00020025409) Goat MODERN SPECIES 14 RYBP (ENSCHIG00000026041) SHQ1 (ENSCHIG00000012271) #7 GXYLT2 (ENSCHIG00000011713) #9 PPP4R2 (ENSCHIG00000006838) PDZRN3 (ENSCHIG00000018984) #11 ENSCHIG00000022511 CNTN3 (ENSCHIG00000015485) #12 CHL1 (ENSCHIG00000015409) #13 CNTN6 (ENSCHIG00000024913) #16 CNTN4 (ENSCHIG00000018077) #17 IL5RA (ENSCHIG00000011708) #18 TRNT1 (ENSCHIG00000007030) #19 CRBN (ENSCHIG00000022897) #20 ENSCHIG00000017211 LRRN1 (ENSCHIG00000009563) #21 ENSCHIG00000019739 #22 SUMF1 (ENSCHIG00000026539) #23 ITPR1 (ENSCHIG00000018318) #24 BHLHE40 (ENSCHIG00000014557) #26 ARL8B (ENSCHIG00000011960) #27 EDEM1 (ENSCHIG00000011192) #28 ENSCHIG00000008494 #29 ENSCHIG00000021691 GRM7 (ENSCHIG00000000474) #29 LMCD1 (ENSCHIG00000012706) #32 SSUH2 (ENSCHIG00000021708) #33 CAV3 (ENSCHIG00000010009) #34 OXTR (ENSCHIG00000007774) #35 RAD18 (ENSCHIG00000007965) #36 ENSCHIG00000016941 SRGAP3 (ENSCHIG00000019201) #37 Bovinae ANCESTRAL SPECIES 16 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Bos ANCESTRAL SPECIES 16 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 #13 ENSGT00940000160606.b #16 ENSGT00940000160606.a.a #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000162732 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861.b #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Bos_a ANCESTRAL SPECIES 9 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 #13 ENSGT00940000160606.b #16 ENSGT00940000160606.a.a #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000162732 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861.b #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Wild yak MODERN SPECIES 787 LRRN1 (ENSBMUG00000014171) #21 ENSBMUG00000014196 #22 ENSBMUG00000014207 SUMF1 (ENSBMUG00000014275) #23 ITPR1 (ENSBMUG00000015280) #24 BHLHE40 (ENSBMUG00000015950) #26 ARL8B (ENSBMUG00000015997) #27 EDEM1 (ENSBMUG00000016011) #28 Domestic yak MODERN SPECIES 14 ENSBGRG00000022179 CNTN3 (ENSBGRG00000022216) #12 ENSBGRG00000022415 CHL1 (ENSBGRG00000022502) #13 CNTN6 (ENSBGRG00000022913) #16 ENSBGRG00000022946 ENSBGRG00000022956 CNTN4 (ENSBGRG00000023008) #17 IL5RA (ENSBGRG00000023363) #18 TRNT1 (ENSBGRG00000023414) #19 ENSBGRG00000023555 CRBN (ENSBGRG00000023591) #20 LRRN1 (ENSBGRG00000023800) #21 ENSBGRG00000023820 ENSBGRG00000023834 ENSBGRG00000023871 #22 ENSBGRG00000023884 SUMF1 (ENSBGRG00000023916) #23 ITPR1 (ENSBGRG00000024500) #24 BHLHE40 (ENSBGRG00000026121) #26 ARL8B (ENSBGRG00000026129) #27 EDEM1 (ENSBGRG00000026138) #28 GRM7 (ENSBGRG00000026154) #29 ENSBGRG00000026180 ENSBGRG00000026184 LMCD1 (ENSBGRG00000006947) #32 SSUH2 (ENSBGRG00000007163) #33 CAV3 (ENSBGRG00000007247) #34 OXTR (ENSBGRG00000007298) #35 RAD18 (ENSBGRG00000007350) #36 SRGAP3 (ENSBGRG00000007703) #37 Bos_b ANCESTRAL SPECIES 17 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.a.b ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 #13 ENSGT00940000160606.a.a #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000162732 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861.b #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Cow MODERN SPECIES 14 ENSBTAG00000054670 RYBP (ENSBTAG00000022689) SHQ1 (ENSBTAG00000005436) #7 GXYLT2 (ENSBTAG00000020481) #9 PPP4R2 (ENSBTAG00000002147) PDZRN3 (ENSBTAG00000018644) #11 CNTN3 (ENSBTAG00000007615) #12 CHL1 (ENSBTAG00000002471) #13 ENSBTAG00000006727 CNTN6 (ENSBTAG00000003592) #16 CNTN4 (ENSBTAG00000033225) #17 IL5RA (ENSBTAG00000000273) #18 TRNT1 (ENSBTAG00000019534) #19 CRBN (ENSBTAG00000019536) #20 LRRN1 (ENSBTAG00000001176) #21 SETMAR (ENSBTAG00000018935) #22 ENSBTAG00000034496 SUMF1 (ENSBTAG00000039855) #23 ITPR1 (ENSBTAG00000020455) #24 BHLHE40 (ENSBTAG00000009863) #26 ARL8B (ENSBTAG00000012902) #27 ENSBTAG00000052329 #27 EDEM1 (ENSBTAG00000012904) #28 GRM7 (ENSBTAG00000013047) #29 LMCD1 (ENSBTAG00000005431) #32 SSUH2 (ENSBTAG00000005433) #33 CAV3 (ENSBTAG00000022699) #34 OXTR (ENSBTAG00000019772) #35 RAD18 (ENSBTAG00000012142) #36 SRGAP3 (ENSBTAG00000004685) #37 THUMPD3 (ENSBTAG00000003112) Hybrid Bos Indicus MODERN SPECIES 14 GXYLT2 (ENSBIXG00005031365) #9 PPP4R2 (ENSBIXG00005031369) PDZRN3 (ENSBIXG00005031380) #11 CNTN3 (ENSBIXG00005031394) #12 ENSBIXG00005031401 CHL1 (ENSBIXG00005031410) #13 ENSBIXG00005031428 CNTN6 (ENSBIXG00005031434) #16 CNTN4 (ENSBIXG00005031442) #17 IL5RA (ENSBIXG00005031445) #18 TRNT1 (ENSBIXG00005031446) #19 CRBN (ENSBIXG00005031447) #20 LRRN1 (ENSBIXG00005031456) #21 ENSBIXG00005031458 SUMF1 (ENSBIXG00005031466) #23 ENSBIXG00005031470 #22 ENSBIXG00005031471 ITPR1 (ENSBIXG00005031482) #24 BHLHE40 (ENSBIXG00005031493) #26 ARL8B (ENSBIXG00005031495) #27 EDEM1 (ENSBIXG00005001970) #28 ENSBIXG00005029056 GRM7 (ENSBIXG00005028996) #29 LMCD1 (ENSBIXG00005005060) #32 SSUH2 (ENSBIXG00005028895) #33 CAV3 (ENSBIXG00005002263) #34 OXTR (ENSBIXG00005028862) #35 RAD18 (ENSBIXG00005002314) #36 SRGAP3 (ENSBIXG00005005347) #37 THUMPD3 (ENSBIXG00005028624) SETD5 (ENSBIXG00005028549) American bison MODERN SPECIES 3113 TRNT1 (ENSBBBG00000006767) #19 CRBN (ENSBBBG00000014614) #20 LRRN1 (ENSBBBG00000007132) #21 ENSBBBG00000014591 #22 SUMF1 (ENSBBBG00000014575) #23 ITPR1 (ENSBBBG00000003374) #24 BHLHE40 (ENSBBBG00000001529) #26 ARL8B (ENSBBBG00000013693) #27 EDEM1 (ENSBBBG00000006878) #28 Camelidae ANCESTRAL SPECIES 7 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Arabian camel MODERN SPECIES 8 RYBP (ENSCDRG00005005642) SHQ1 (ENSCDRG00005005675) #7 GXYLT2 (ENSCDRG00005005730) #9 PPP4R2 (ENSCDRG00005005747) PDZRN3 (ENSCDRG00005005789) #11 CNTN3 (ENSCDRG00005005902) #12 ENSCDRG00005005931 CHL1 (ENSCDRG00005005966) #13 CNTN6 (ENSCDRG00005006079) #16 ENSCDRG00005006107 CNTN4 (ENSCDRG00005006128) #17 TRNT1 (ENSCDRG00005006181) #19 IL5RA (ENSCDRG00005006219) #18 CRBN (ENSCDRG00005006474) #20 LRRN1 (ENSCDRG00005006616) #21 ENSCDRG00005006638 #22 ENSCDRG00005006687 SUMF1 (ENSCDRG00005006754) #23 ITPR1 (ENSCDRG00005006971) #24 BHLHE40 (ENSCDRG00005007592) #26 ARL8B (ENSCDRG00005007624) #27 EDEM1 (ENSCDRG00005007706) #28 ENSCDRG00005007733 GRM7 (ENSCDRG00005007785) #29 LMCD1 (ENSCDRG00005008646) #32 SSUH2 (ENSCDRG00005008739) #33 CAV3 (ENSCDRG00005008785) #34 OXTR (ENSCDRG00005008802) #35 RAD18 (ENSCDRG00005008867) #36 SRGAP3 (ENSCDRG00005009310) #37 THUMPD3 (ENSCDRG00005009741) Suina ANCESTRAL SPECIES 1 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Pig MODERN SPECIES 4 ENSSSCG00000047664 CNTN3 (ENSSSCG00000011522) #12 ENSSSCG00000048746 ENSSSCG00000058117 ENSSSCG00000048446 ENSSSCG00000050663 CHL1 (ENSSSCG00000011524) #13 CNTN6 (ENSSSCG00000038152) #16 ENSSSCG00000050505 CNTN4 (ENSSSCG00000011527) #17 IL5RA (ENSSSCG00000011528) #18 TRNT1 (ENSSSCG00000011529) #19 CRBN (ENSSSCG00000011530) #20 ENSSSCG00000041465 LRRN1 (ENSSSCG00000023806) #21 ENSSSCG00000011531 #22 SUMF1 (ENSSSCG00000011532) #23 ITPR1 (ENSSSCG00000023437) #24 BHLHE40 (ENSSSCG00000036136) #26 ARL8B (ENSSSCG00000011535) #27 ENSSSCG00000044623 EDEM1 (ENSSSCG00000034197) #28 GRM7 (ENSSSCG00000023891) #29 LMCD1 (ENSSSCG00000011538) #32 SSUH2 (ENSSSCG00000023082) #33 CAV3 (ENSSSCG00000056902) #34 OXTR (ENSSSCG00000021585) #35 RAD18 (ENSSSCG00000026158) #36 SRGAP3 (ENSSSCG00000033624) #37 THUMPD3 (ENSSSCG00000011542) SETD5 (ENSSSCG00000011540) Chacoan peccary MODERN SPECIES 950 PROK2 (ENSCWAG00000020863) RYBP (ENSCWAG00000020884) SHQ1 (ENSCWAG00000020894) #7 GXYLT2 (ENSCWAG00000020910) #9 PPP4R2 (ENSCWAG00000020926) PDZRN3 (ENSCWAG00000020942) #11 CNTN3 (ENSCWAG00000020972) #12 CHL1 (ENSCWAG00000021043) #13 CNTN6 (ENSCWAG00000021190) #16 ENSCWAG00000021205 CNTN4 (ENSCWAG00000021224) #17 IL5RA (ENSCWAG00000021262) #18 TRNT1 (ENSCWAG00000021303) #19 CRBN (ENSCWAG00000021315) #20 LRRN1 (ENSCWAG00000021333) #21 ENSCWAG00000021337 #22 SUMF1 (ENSCWAG00000021351) #23 ITPR1 (ENSCWAG00000021394) #24 BHLHE40 (ENSCWAG00000021441) #26 ARL8B (ENSCWAG00000021449) #27 EDEM1 (ENSCWAG00000021462) #28 GRM7 (ENSCWAG00000021475) #29 LMCD1 (ENSCWAG00000021516) #32 ENSCWAG00000021523 SSUH2 (ENSCWAG00000021528) #33 CAV3 (ENSCWAG00000021533) #34 OXTR (ENSCWAG00000021536) #35 RAD18 (ENSCWAG00000021543) #36 SRGAP3 (ENSCWAG00000021560) #37 THUMPD3 (ENSCWAG00000021592) SETD5 (ENSCWAG00000021607) Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Carnivora ANCESTRAL SPECIES 6 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Caniformia ANCESTRAL SPECIES 4 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Caniformia_b ANCESTRAL SPECIES 16 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Ursidae ANCESTRAL SPECIES 11 ENSGT00390000013995.b.a ENSGT00940000173944 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00390000000263.fb.a ENSGT00940000160080.b #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Ursus ANCESTRAL SPECIES 43 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E.e #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Polar bear MODERN SPECIES 210 LRRN1 (ENSUMAG00000024226) #21 ENSUMAG00000024224 ENSUMAG00000024223 #22 SUMF1 (ENSUMAG00000024222) #23 ITPR1 (ENSUMAG00000020523) #24 BHLHE40 (ENSUMAG00000019582) #26 ARL8B (ENSUMAG00000019574) #27 EDEM1 (ENSUMAG00000019393) #28 ENSUMAG00000019361 GRM7 (ENSUMAG00000019342) #29 LMCD1 (ENSUMAG00000019308) #32 SSUH2 (ENSUMAG00000019301) #33 CAV3 (ENSUMAG00000019292) #34 ENSUMAG00000019289 #35 RAD18 (ENSUMAG00000019279) #36 ENSUMAG00000019260 #37 THUMPD3 (ENSUMAG00000019241) SETD5 (ENSUMAG00000019048) American black bear MODERN SPECIES 1096 ENSUAMG00000024275 #22 SUMF1 (ENSUAMG00000024276) #23 ENSUAMG00000024337 #24 Giant Panda MODERN SPECIES 14 RYBP (ENSAMEG00000015131) ENSAMEG00000015139 SHQ1 (ENSAMEG00000015140) #7 GXYLT2 (ENSAMEG00000015150) #9 PPP4R2 (ENSAMEG00000015164) PDZRN3 (ENSAMEG00000025975) #11 ENSAMEG00000011395 #12 ENSAMEG00000023576 ENSAMEG00000013402 #13 CNTN6 (ENSAMEG00000014259) #16 CNTN4 (ENSAMEG00000014387) #17 IL5RA (ENSAMEG00000014490) #18 TRNT1 (ENSAMEG00000014520) #19 CRBN (ENSAMEG00000014541) #20 LRRN1 (ENSAMEG00000018835) #21 ENSAMEG00000015893 #22 SUMF1 (ENSAMEG00000015897) #23 ITPR1 (ENSAMEG00000015900) #24 BHLHE40 (ENSAMEG00000016060) #26 ARL8B (ENSAMEG00000026834) #27 EDEM1 (ENSAMEG00000016099) #28 ENSAMEG00000028093 GRM7 (ENSAMEG00000027634) #29 LMCD1 (ENSAMEG00000012319) #32 SSUH2 (ENSAMEG00000012342) #33 CAV3 (ENSAMEG00000026850) #34 RAD18 (ENSAMEG00000012375) #36 SRGAP3 (ENSAMEG00000012398) #37 THUMPD3 (ENSAMEG00000011321) SETD5 (ENSAMEG00000011307) LHFPL4 (ENSAMEG00000029596) Mustelinae ANCESTRAL SPECIES 18 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852.d American mink MODERN SPECIES 259 C9JHK2 (ENSNVIG00000014801) #22 SUMF1 (ENSNVIG00000014740) #23 ENSNVIG00000014725 #25 ITPR1 (ENSNVIG00000013256) #24 BHLHE40 (ENSNVIG00000013166) #26 ARL8B (ENSNVIG00000013147) #27 EDEM1 (ENSNVIG00000013114) #28 Ferret MODERN SPECIES 163 PPP4R2 (ENSMPUG00000017008) PDZRN3 (ENSMPUG00000017009) #11 ENSMPUG00000017010 CNTN3 (ENSMPUG00000017011) #12 ENSMPUG00000020109 ENSMPUG00000017012 CHL1 (ENSMPUG00000017013) #13 ENSMPUG00000020110 CNTN6 (ENSMPUG00000017014) #16 CNTN4 (ENSMPUG00000017015) #17 IL5RA (ENSMPUG00000017016) #18 TRNT1 (ENSMPUG00000017017) #19 CRBN (ENSMPUG00000017018) #20 LRRN1 (ENSMPUG00000020111) #21 ENSMPUG00000017019 ENSMPUG00000017021 #22 SUMF1 (ENSMPUG00000017022) #23 ENSMPUG00000017028 ITPR1 (ENSMPUG00000017024) #24 BHLHE40 (ENSMPUG00000017029) #26 ENSMPUG00000017030 ARL8B (ENSMPUG00000017035) #27 EDEM1 (ENSMPUG00000017042) #28 ENSMPUG00000017055 ENSMPUG00000020112 GRM7 (ENSMPUG00000017057) #29 ENSMPUG00000020113 LMCD1 (ENSMPUG00000017058) #32 SSUH2 (ENSMPUG00000017059) #33 CAV3 (ENSMPUG00000017061) #34 OXTR (ENSMPUG00000017062) #35 Canidae ANCESTRAL SPECIES ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Canis_lupus ANCESTRAL SPECIES 1 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00550000074855.u.a.a.a.a.b ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Dog MODERN SPECIES 12 SHQ1 (ENSCAFG00845007261) #7 GXYLT2 (ENSCAFG00845007149) #9 PPP4R2 (ENSCAFG00845007022) PDZRN3 (ENSCAFG00845006843) #11 CNTN3 (ENSCAFG00845006575) #12 ENSCAFG00845006474 ENSCAFG00845006445 ENSCAFG00845006097 #13 CNTN6 (ENSCAFG00845005936) #16 CNTN4 (ENSCAFG00845012710) #17 IL5RA (ENSCAFG00845012603) #18 TRNT1 (ENSCAFG00845012496) #19 CRBN (ENSCAFG00845012410) #20 ENSCAFG00845012385 LRRN1 (ENSCAFG00845012344) #21 SETMAR (ENSCAFG00845012243) #22 ENSCAFG00845012212 SUMF1 (ENSCAFG00845012121) #23 ITPR1 (ENSCAFG00845011583) #24 BHLHE40 (ENSCAFG00845011295) #26 ARL8B (ENSCAFG00845011245) #27 EDEM1 (ENSCAFG00845011142) #28 ENSCAFG00845011042 GRM7 (ENSCAFG00845010858) #29 LMCD1 (ENSCAFG00845010761) #32 SSUH2 (ENSCAFG00845010670) #33 PSMA1 (ENSCAFG00845010623) CAV3 (ENSCAFG00845010595) #34 OXTR (ENSCAFG00845010546) #35 RAD18 (ENSCAFG00845010415) #36 SRGAP3 (ENSCAFG00845010252) #37 Dingo MODERN SPECIES 236 PDZRN3 (ENSCAFG00020015173) #11 CNTN3 (ENSCAFG00020015151) #12 CHL1 (ENSCAFG00020015069) #13 ENSCAFG00020015018 #16 ENSCAFG00020015005 CNTN4 (ENSCAFG00020014776) #17 IL5RA (ENSCAFG00020014747) #18 TRNT1 (ENSCAFG00020014746) #19 CRBN (ENSCAFG00020014744) #20 LRRN1 (ENSCAFG00020014742) #21 ENSCAFG00020014740 #22 SUMF1 (ENSCAFG00020014738) #23 ITPR1 (ENSCAFG00020009780) #24 BHLHE40 (ENSCAFG00020009373) #26 ARL8B (ENSCAFG00020009368) #27 EDEM1 (ENSCAFG00020009305) #28 ENSCAFG00020009301 ENSCAFG00020009294 #29 GRM7 (ENSCAFG00020009277) #29 LMCD1 (ENSCAFG00020009259) #32 SSUH2 (ENSCAFG00020009247) #33 ENSCAFG00020009244 CAV3 (ENSCAFG00020009240) #34 OXTR (ENSCAFG00020009232) #35 ENSCAFG00020009230 RAD18 (ENSCAFG00020009228) #36 Red fox MODERN SPECIES 5 SHQ1 (ENSVVUG00000013906) #7 GXYLT2 (ENSVVUG00000013899) #9 PPP4R2 (ENSVVUG00000013896) ENSVVUG00000013883 ENSVVUG00000013879 #11 CNTN3 (ENSVVUG00000013866) #12 ENSVVUG00000013836 CHL1 (ENSVVUG00000013809) #13 CNTN6 (ENSVVUG00000013018) #16 CNTN4 (ENSVVUG00000012913) #17 IL5RA (ENSVVUG00000012836) #18 TRNT1 (ENSVVUG00000012810) #19 CRBN (ENSVVUG00000012661) #20 LRRN1 (ENSVVUG00000012640) #21 ENSVVUG00000012624 ENSVVUG00000012619 #22 SUMF1 (ENSVVUG00000012610) #23 ENSVVUG00000011191 #24 ENSVVUG00000009857 #24 BHLHE40 (ENSVVUG00000009777) #26 ARL8B (ENSVVUG00000009760) #27 EDEM1 (ENSVVUG00000009660) #28 ENSVVUG00000009583 ##29 Felidae ANCESTRAL SPECIES 17 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00390000008694.b.b.d ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Panthera ANCESTRAL SPECIES 1 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00390000008694.b.b.d ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Tiger MODERN SPECIES 83 ENSPTIG00000011266 #22 SUMF1 (ENSPTIG00000011135) #23 ITPR1 (ENSPTIG00000010372) #24 BHLHE40 (ENSPTIG00000010250) #26 ARL8B (ENSPTIG00000010204) #27 EDEM1 (ENSPTIG00000010198) #28 ENSPTIG00000010162 Panthera_a ANCESTRAL SPECIES ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b lion MODERN SPECIES 2 RYBP (ENSPLOG00000002820) SHQ1 (ENSPLOG00000002849) #7 GXYLT2 (ENSPLOG00000002888) #9 PPP4R2 (ENSPLOG00000002914) PDZRN3 (ENSPLOG00000003033) #11 CNTN3 (ENSPLOG00000003083) #12 CHL1 (ENSPLOG00000003228) #13 ENSPLOG00000003473 CNTN6 (ENSPLOG00000003490) #16 ENSPLOG00000003587 CNTN4 (ENSPLOG00000003617) #17 IL5RA (ENSPLOG00000003728) #18 TRNT1 (ENSPLOG00000003771) #19 CRBN (ENSPLOG00000003808) #20 LRRN1 (ENSPLOG00000003838) #21 ENSPLOG00000003853 #22 SUMF1 (ENSPLOG00000003874) #23 ITPR1 (ENSPLOG00000003942) #24 BHLHE40 (ENSPLOG00000004020) #26 ARL8B (ENSPLOG00000004035) #27 EDEM1 (ENSPLOG00000004057) #28 GRM7 (ENSPLOG00000004096) #29 LMCD1 (ENSPLOG00000004127) #32 SSUH2 (ENSPLOG00000004153) #33 CAV3 (ENSPLOG00000004164) #34 OXTR (ENSPLOG00000004169) #35 RAD18 (ENSPLOG00000004183) #36 SRGAP3 (ENSPLOG00000004214) #37 THUMPD3 (ENSPLOG00000004248) SETD5 (ENSPLOG00000004271) MTMR14 (ENSPLOG00000004371) leopard MODERN SPECIES 119 CNTN6 (ENSPPRG00000002135) #16 CNTN4 (ENSPPRG00000002020) #17 IL5RA (ENSPPRG00000001745) #18 TRNT1 (ENSPPRG00000001327) #19 CRBN (ENSPPRG00000001273) #20 LRRN1 (ENSPPRG00000011605) #21 ENSPPRG00000001161 #22 SUMF1 (ENSPPRG00000001097) #23 ITPR1 (ENSPPRG00000000604) #24 BHLHE40 (ENSPPRG00000022800) #26 ARL8B (ENSPPRG00000022808) #27 EDEM1 (ENSPPRG00000022849) #28 ENSPPRG00000022876 ENSPPRG00000022899 Cat MODERN SPECIES 1 SHQ1 (ENSFCAG00000012781) #7 GXYLT2 (ENSFCAG00000011005) #9 PPP4R2 (ENSFCAG00000029481) PDZRN3 (ENSFCAG00000040417) #11 CNTN3 (ENSFCAG00000012778) #12 ENSFCAG00000005652 CHL1 (ENSFCAG00000011105) #13 ENSFCAG00000034166 CNTN6 (ENSFCAG00000015456) #16 ENSFCAG00000052641 CNTN4 (ENSFCAG00000000649) #17 IL5RA (ENSFCAG00000000652) #18 TRNT1 (ENSFCAG00000026805) #19 CRBN (ENSFCAG00000026512) #20 LRRN1 (ENSFCAG00000029530) #21 ENSFCAG00000037787 #22 SUMF1 (ENSFCAG00000011512) #23 ITPR1 (ENSFCAG00000002477) #24 BHLHE40 (ENSFCAG00000034238) #26 ARL8B (ENSFCAG00000000736) #27 EDEM1 (ENSFCAG00000000737) #28 ENSFCAG00000029757 GRM7 (ENSFCAG00000029003) #29 LMCD1 (ENSFCAG00000014723) #32 SSUH2 (ENSFCAG00000014724) #33 CAV3 (ENSFCAG00000035688) #34 OXTR (ENSFCAG00000014726) #35 RAD18 (ENSFCAG00000025747) #36 SRGAP3 (ENSFCAG00000008390) #37 THUMPD3 (ENSFCAG00000006171) SETD5 (ENSFCAG00000005610) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Chiroptera ANCESTRAL SPECIES 88 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 Microchiroptera ANCESTRAL SPECIES 16 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00530000063868.a ENSGT00940000162493 ENSGT00940000156030 ENSGT00940000157494 ENSGT00940000157262 ENSGT00390000007084.c.b ENSGT00940000155631 ENSGT00940000161296 ENSGT00940000159388 ENSGT00940000159711 Greater horseshoe bat MODERN SPECIES 8 PDZRN3 (ENSRFEG00010011914) #11 ENSRFEG00010011970 CNTN3 (ENSRFEG00010012552) #12 CHL1 (ENSRFEG00010012636) #13 CNTN6 (ENSRFEG00010012827) #16 CNTN4 (ENSRFEG00010012870) #17 IL5RA (ENSRFEG00010012950) #18 TRNT1 (ENSRFEG00010013326) #19 CRBN (ENSRFEG00010013551) #20 LRRN1 (ENSRFEG00010013770) #21 SUMF1 (ENSRFEG00010013803) #23 ENSRFEG00010014043 #22 ITPR1 (ENSRFEG00010014134) #24 BHLHE40 (ENSRFEG00010014606) #26 ARL8B (ENSRFEG00010014676) #27 EDEM1 (ENSRFEG00010014776) #28 TWF2 (ENSRFEG00010014959) TLR9 (ENSRFEG00010015047) ALAS1 (ENSRFEG00010015102) POC1A (ENSRFEG00010015173) DUSP7 (ENSRFEG00010015305) ENSRFEG00010015354 ACY1 (ENSRFEG00010015466) ABHD14A (ENSRFEG00010015875) ABHD14B (ENSRFEG00010015992) PCBP4 (ENSRFEG00010016071) ENSRFEG00010016188 Microbat MODERN SPECIES 1601 LRRN1 (ENSMLUG00000003543) #21 ENSMLUG00000027733 #22 SUMF1 (ENSMLUG00000015762) #23 ENSMLUG00000030685 ENSMLUG00000007717 ##24 Equus ANCESTRAL SPECIES 5 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT01090000263390 ENSGT00940000157446 Horse MODERN SPECIES 7 GPR27 (ENSECAG00000032664) RYBP (ENSECAG00000000266) SHQ1 (ENSECAG00000015673) #7 GXYLT2 (ENSECAG00000008483) #9 PPP4R2 (ENSECAG00000000689) PDZRN3 (ENSECAG00000014864) #11 CNTN3 (ENSECAG00000013575) #12 CHL1 (ENSECAG00000024808) #13 ENSECAG00000027842 CNTN6 (ENSECAG00000015975) #16 CNTN4 (ENSECAG00000009769) #17 IL5RA (ENSECAG00000022503) #18 TRNT1 (ENSECAG00000014420) #19 CRBN (ENSECAG00000015422) #20 LRRN1 (ENSECAG00000002874) #21 ENSECAG00000011514 #22 SUMF1 (ENSECAG00000020242) #23 ITPR1 (ENSECAG00000020933) #24 BHLHE40 (ENSECAG00000015069) #26 ARL8B (ENSECAG00000013084) #27 EDEM1 (ENSECAG00000023369) #28 ENSECAG00000056332 ENSECAG00000048581 GRM7 (ENSECAG00000016171) #29 LMCD1 (ENSECAG00000010791) #32 SSUH2 (ENSECAG00000039589) #33 CAV3 (ENSECAG00000020701) #34 OXTR (ENSECAG00000017844) #35 ENSECAG00000056983 RAD18 (ENSECAG00000010746) #36 SRGAP3 (ENSECAG00000010118) #37 Donkey MODERN SPECIES 13 PROK2 (ENSEASG00005033363) RYBP (ENSEASG00005029789) SHQ1 (ENSEASG00005002237) #7 GXYLT2 (ENSEASG00005002247) #9 PPP4R2 (ENSEASG00005002252) PDZRN3 (ENSEASG00005002263) #11 ENSEASG00005002280 #12 ENSEASG00005002560 #13 ENSEASG00005032406 CNTN6 (ENSEASG00005003549) #16 CNTN4 (ENSEASG00005003558) #17 IL5RA (ENSEASG00005003564) #18 TRNT1 (ENSEASG00005003577) #19 CRBN (ENSEASG00005003584) #20 LRRN1 (ENSEASG00005003592) #21 ENSEASG00005032131 #22 SUMF1 (ENSEASG00005003601) #23 ITPR1 (ENSEASG00005004852) #24 BHLHE40 (ENSEASG00005034761) #26 ARL8B (ENSEASG00005023967) #27 EDEM1 (ENSEASG00005013107) #28 ENSEASG00005031999 GRM7 (ENSEASG00005013291) #29 ENSEASG00005013295 LMCD1 (ENSEASG00005013302) #32 SSUH2 (ENSEASG00005013304) #33 CAV3 (ENSEASG00005033820) #34 OXTR (ENSEASG00005013312) #35 RAD18 (ENSEASG00005013316) #36 SRGAP3 (ENSEASG00005013321) #37 THUMPD3 (ENSEASG00005013327)