Vertebrata ANCESTRAL SPECIES ENSGT00940000162663 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000162663 #22 Euteleostomi ANCESTRAL SPECIES 9 ENSGT00390000010697 ENSGT00550000074831 ENSGT00390000008631.a ENSGT00940000159731 ENSGT01020000230354.A.a ENSGT00940000156326 ENSGT00730000111641 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a ##35 ENSGT00390000016404 #20 ENSGT00940000166994 ENSGT00940000165984 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00940000165309 ENSGT00730000111641 ENSGT00940000159892 ENSGT00940000155865 ENSGT00890000139436.A.a ENSGT00940000167138 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a ##35 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873 ENSGT00950000183006.A.a.b ##34 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a Tetrapoda ANCESTRAL SPECIES 14 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873 ENSGT00950000183006.A.a.b ##34 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a Amniota ANCESTRAL SPECIES 22 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873 ENSGT00950000183006.A.a.b ##34 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a Mammalia ANCESTRAL SPECIES 18 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Theria ANCESTRAL SPECIES 28 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Eutheria ANCESTRAL SPECIES 14 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Glires ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Rodentia ANCESTRAL SPECIES 2 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Rodentia_B ANCESTRAL SPECIES 26 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Myomorpha ANCESTRAL SPECIES 36 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Muroidea ANCESTRAL SPECIES 37 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Muroidea_A ANCESTRAL SPECIES 4 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00960000189964 #25 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Murinae ANCESTRAL SPECIES 4 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00960000189964 #25 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Rat MODERN SPECIES 14 Shq1 (ENSRNOG00000005433) #7 Actg1-ps9 (ENSRNOG00000062691) #8 Gxylt2 (ENSRNOG00000005621) #9 Ppp4r2 (ENSRNOG00000024647) #10 Pdzrn3 (ENSRNOG00000057556) #11 Cntn3 (ENSRNOG00000006144) #12 Chl1 (ENSRNOG00000045771) #13 ENSRNOG00000065903 #14 AABR07061614.1 (ENSRNOG00000032820) #15 Cntn6 (ENSRNOG00000032517) #16 Cntn4 (ENSRNOG00000005652) #17 Il5ra (ENSRNOG00000005954) #18 Trnt1 (ENSRNOG00000006432) #19 Crbn (ENSRNOG00000006534) #20 Lrrn1 (ENSRNOG00000006802) #21 Setmar (ENSRNOG00000006806) #22 Sumf1 (ENSRNOG00000006813) #23 Itpr1 (ENSRNOG00000007104) #24 AABR07061707.1 (ENSRNOG00000052718) #25 Bhlhe40 (ENSRNOG00000007152) #26 Arl8b (ENSRNOG00000055860) #27 Edem1 (ENSRNOG00000055365) #28 Grm7 (ENSRNOG00000005662) #29 LOC120102505 (ENSRNOG00000042804) #30 ENSRNOG00000064122 #31 Lmcd1 (ENSRNOG00000005690) #32 Ssuh2 (ENSRNOG00000005734) #33 Cav3 (ENSRNOG00000005798) #34 Oxtr (ENSRNOG00000005806) #35 Rad18 (ENSRNOG00000005907) #36 Srgap3 (ENSRNOG00000006509) #37 Mus ANCESTRAL SPECIES 12 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Mus_A ANCESTRAL SPECIES 7 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Mus_B ANCESTRAL SPECIES 15 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Mouse MODERN SPECIES 15 Gpr27 (ENSMUSG00000072875) Prok2 (ENSMUSG00000030069) Rybp (ENSMUSG00000072872) Shq1 (ENSMUSG00000035378) #7 Gxylt2 (ENSMUSG00000030074) #9 Ppp4r2 (ENSMUSG00000052144) #10 Pdzrn3 (ENSMUSG00000035357) #11 Cntn3 (ENSMUSG00000030075) #12 Chl1 (ENSMUSG00000030077) #13 Cntn6 (ENSMUSG00000030092) #16 Cntn4 (ENSMUSG00000064293) #17 Il5ra (ENSMUSG00000005364) #18 Trnt1 (ENSMUSG00000013736) #19 Crbn (ENSMUSG00000005362) #20 Lrrn1 (ENSMUSG00000034648) #21 Setmar (ENSMUSG00000034639) #22 Sumf1 (ENSMUSG00000030101) #23 Itpr1 (ENSMUSG00000030102) #24 Bhlhe40 (ENSMUSG00000030103) #26 Arl8b (ENSMUSG00000030105) #27 Edem1 (ENSMUSG00000030104) #28 Grm7 (ENSMUSG00000056755) #29 Lmcd1 (ENSMUSG00000057604) #32 Ssu2 (ENSMUSG00000034387) #33 Cav3 (ENSMUSG00000062694) #34 Oxtr (ENSMUSG00000049112) #35 Rad18 (ENSMUSG00000030254) #36 Srgap3 (ENSMUSG00000030257) #37 Thumpd3 (ENSMUSG00000030264) Setd5 (ENSMUSG00000034269) Lhfpl4 (ENSMUSG00000042873) Mus_C ANCESTRAL SPECIES 18 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b spretus MODERN SPECIES 15 Gpr27 (MGP_SPRETEiJ_G0029714) Prok2 (MGP_SPRETEiJ_G0029715) Rybp (MGP_SPRETEiJ_G0029716) Shq1 (MGP_SPRETEiJ_G0029717) #7 Gxylt2 (MGP_SPRETEiJ_G0029718) #9 Ppp4r2 (MGP_SPRETEiJ_G0029719) #10 Pdzrn3 (MGP_SPRETEiJ_G0029720) #11 Cntn3 (MGP_SPRETEiJ_G0029721) #12 Chl1 (MGP_SPRETEiJ_G0029722) #13 Cntn6 (MGP_SPRETEiJ_G0029723) #16 Cntn4 (MGP_SPRETEiJ_G0029724) #17 Il5ra (MGP_SPRETEiJ_G0029725) #18 Trnt1 (MGP_SPRETEiJ_G0029726) #19 Crbn (MGP_SPRETEiJ_G0029727) #20 Lrrn1 (MGP_SPRETEiJ_G0029728) #21 Setmar (MGP_SPRETEiJ_G0029729) #22 Sumf1 (MGP_SPRETEiJ_G0029730) #23 Itpr1 (MGP_SPRETEiJ_G0029731) #24 Bhlhe40 (MGP_SPRETEiJ_G0029732) #26 Arl8b (MGP_SPRETEiJ_G0029733) #27 Edem1 (MGP_SPRETEiJ_G0029734) #28 Grm7 (MGP_SPRETEiJ_G0029735) #29 Lmcd1 (MGP_SPRETEiJ_G0029736) #32 Ssu2 (MGP_SPRETEiJ_G0029737) #33 Cav3 (MGP_SPRETEiJ_G0029738) #34 Oxtr (MGP_SPRETEiJ_G0029739) #35 Rad18 (MGP_SPRETEiJ_G0029740) #36 Srgap3 (MGP_SPRETEiJ_G0029741) #37 Thumpd3 (MGP_SPRETEiJ_G0029742) Setd5 (MGP_SPRETEiJ_G0029743) Lhfpl4 (MGP_SPRETEiJ_G0029744) Steppe mouse MODERN SPECIES 2978 ENSMSIG00000009208 #22 Sumf1 (ENSMSIG00000009243) #23 Itpr1 (ENSMSIG00000009395) #24 Bhlhe40 (ENSMSIG00000009908) #26 Arl8b (ENSMSIG00000009944) #27 Edem1 (ENSMSIG00000010010) #28 ENSMSIG00000010037 Ryukyu mouse MODERN SPECIES 15 Gpr27 (MGP_CAROLIEiJ_G0028686) Prok2 (MGP_CAROLIEiJ_G0028687) Rybp (MGP_CAROLIEiJ_G0028688) Shq1 (MGP_CAROLIEiJ_G0028689) #7 Gxylt2 (MGP_CAROLIEiJ_G0028690) #9 Ppp4r2 (MGP_CAROLIEiJ_G0028691) #10 Pdzrn3 (MGP_CAROLIEiJ_G0028692) #11 Cntn3 (MGP_CAROLIEiJ_G0028693) #12 Chl1 (MGP_CAROLIEiJ_G0028694) #13 Cntn6 (MGP_CAROLIEiJ_G0028695) #16 Cntn4 (MGP_CAROLIEiJ_G0028696) #17 Il5ra (MGP_CAROLIEiJ_G0028697) #18 Trnt1 (MGP_CAROLIEiJ_G0028698) #19 Crbn (MGP_CAROLIEiJ_G0028699) #20 Lrrn1 (MGP_CAROLIEiJ_G0028700) #21 Setmar (MGP_CAROLIEiJ_G0028701) #22 Sumf1 (MGP_CAROLIEiJ_G0028702) #23 Itpr1 (MGP_CAROLIEiJ_G0028703) #24 Bhlhe40 (MGP_CAROLIEiJ_G0028704) #26 Arl8b (MGP_CAROLIEiJ_G0028705) #27 Edem1 (MGP_CAROLIEiJ_G0028706) #28 Grm7 (MGP_CAROLIEiJ_G0028707) #29 Lmcd1 (MGP_CAROLIEiJ_G0028708) #32 Ssu2 (MGP_CAROLIEiJ_G0028709) #33 Cav3 (MGP_CAROLIEiJ_G0028710) #34 Oxtr (MGP_CAROLIEiJ_G0028711) #35 Rad18 (MGP_CAROLIEiJ_G0028712) #36 Srgap3 (MGP_CAROLIEiJ_G0028713) #37 MGP_CAROLIEiJ_G0028714 Setd5 (MGP_CAROLIEiJ_G0028715) Lhfpl4 (MGP_CAROLIEiJ_G0028716) Shrew mouse MODERN SPECIES 11 Gpr27 (MGP_PahariEiJ_G0022437) Prok2 (MGP_PahariEiJ_G0022438) Rybp (MGP_PahariEiJ_G0022439) Shq1 (MGP_PahariEiJ_G0022440) #7 Gxylt2 (MGP_PahariEiJ_G0022441) #9 Ppp4r2 (MGP_PahariEiJ_G0022442) #10 Pdzrn3 (MGP_PahariEiJ_G0022443) #11 Cntn3 (MGP_PahariEiJ_G0022444) #12 Chl1 (MGP_PahariEiJ_G0022445) #13 Cntn6 (MGP_PahariEiJ_G0022446) #16 MGP_PahariEiJ_G0022447 #17 Il5ra (MGP_PahariEiJ_G0022448) #18 Trnt1 (MGP_PahariEiJ_G0022449) #19 Crbn (MGP_PahariEiJ_G0022450) #20 Lrrn1 (MGP_PahariEiJ_G0022451) #21 Setmar (MGP_PahariEiJ_G0022452) #22 Sumf1 (MGP_PahariEiJ_G0022453) #23 Itpr1 (MGP_PahariEiJ_G0022454) #24 Bhlhe40 (MGP_PahariEiJ_G0022455) #26 Arl8b (MGP_PahariEiJ_G0022456) #27 Edem1 (MGP_PahariEiJ_G0022457) #28 Grm7 (MGP_PahariEiJ_G0022458) #29 Lmcd1 (MGP_PahariEiJ_G0022459) #32 Ssu2 (MGP_PahariEiJ_G0022460) #33 Cav3 (MGP_PahariEiJ_G0022461) #34 Oxtr (MGP_PahariEiJ_G0022462) #35 Rad18 (MGP_PahariEiJ_G0022463) #36 Srgap3 (MGP_PahariEiJ_G0022464) #37 Thumpd3 (MGP_PahariEiJ_G0022465) Setd5 (MGP_PahariEiJ_G0022466) Lhfpl4 (MGP_PahariEiJ_G0022467) Cricetidae ANCESTRAL SPECIES 3 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00960000189964 #25 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Cricetinae ANCESTRAL SPECIES 8 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Golden Hamster MODERN SPECIES 622 Virma (ENSMAUG00000007195) Fsbp (ENSMAUG00000021489) Rad54b (ENSMAUG00000013586) Gem (ENSMAUG00000006962) Cdh17 (ENSMAUG00000009983) Tmem67 (ENSMAUG00000001046) ENSMAUG00000021752 Cibar1 (ENSMAUG00000009551) Triqk (ENSMAUG00000012998) Cntn4 (ENSMAUG00000009508) #17 Il5ra (ENSMAUG00000021101) #18 Trnt1 (ENSMAUG00000020707) #19 Crbn (ENSMAUG00000001100) #20 Lrrn1 (ENSMAUG00000005827) #21 ENSMAUG00000009893 Setmar (ENSMAUG00000020081) #22 Sumf1 (ENSMAUG00000014146) #23 Itpr1 (ENSMAUG00000016842) #24 Bhlhe40 (ENSMAUG00000009803) #26 Arl8b (ENSMAUG00000016691) #27 Edem1 (ENSMAUG00000008525) #28 ENSMAUG00000019900 Grm7 (ENSMAUG00000021392) #29 Lmcd1 (ENSMAUG00000014020) #32 Ssu2 (ENSMAUG00000020801) #33 Cav3 (ENSMAUG00000019157) #34 Oxtr (ENSMAUG00000020582) #35 Rad18 (ENSMAUG00000020642) #36 Srgap3 (ENSMAUG00000020606) #37 Thumpd3 (ENSMAUG00000012250) Setd5 (ENSMAUG00000016093) Chinese hamster chok1gshd MODERN SPECIES 144 Gxylt2 (ENSCGRG00001012822) #9 Ppp4r2 (ENSCGRG00001010724) #10 Pdzrn3 (ENSCGRG00001017365) #11 ENSCGRG00001003940 Cntn3 (ENSCGRG00001013551) #12 ENSCGRG00001015607 ENSCGRG00001015306 Chl1 (ENSCGRG00001021609) #13 Cntn6 (ENSCGRG00001012547) #16 Cntn4 (ENSCGRG00001005552) #17 Il5ra (ENSCGRG00001023890) #18 Trnt1 (ENSCGRG00001009998) #19 Crbn (ENSCGRG00001014850) #20 Lrrn1 (ENSCGRG00001000760) #21 ENSCGRG00001003904 Setmar (ENSCGRG00001005415) #22 Sumf1 (ENSCGRG00001010527) #23 Itpr1 (ENSCGRG00001019657) #24 Bhlhe40 (ENSCGRG00001015526) #26 Arl8b (ENSCGRG00001018115) #27 Edem1 (ENSCGRG00001020705) #28 ENSCGRG00001023368 Grm7 (ENSCGRG00001005305) #29 Lmcd1 (ENSCGRG00001009463) #32 Ssu2 (ENSCGRG00001012512) #33 Cav3 (ENSCGRG00001014266) #34 Oxtr (ENSCGRG00001014988) #35 ENSCGRG00001015311 ENSCGRG00001018154 #36 ENSCGRG00001021718 Srgap3 (ENSCGRG00001010935) #37 Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00960000189964 #25 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000026210 Prok2 (ENSPEMG00000030947) ENSPEMG00000028366 ENSPEMG00000017621 Shq1 (ENSPEMG00000000251) #7 Gxylt2 (ENSPEMG00000005596) #9 Pdzrn3 (ENSPEMG00000019769) #11 Cntn3 (ENSPEMG00000014200) #12 Chl1 (ENSPEMG00000023675) #13 Cntn6 (ENSPEMG00000019384) #16 Cntn4 (ENSPEMG00000020085) #17 Il5ra (ENSPEMG00000000193) #18 Trnt1 (ENSPEMG00000019845) #19 Crbn (ENSPEMG00000020177) #20 Lrrn1 (ENSPEMG00000019903) #21 Setmar (ENSPEMG00000023423) #22 Sumf1 (ENSPEMG00000012549) #23 Itpr1 (ENSPEMG00000018533) #24 ENSPEMG00000025770 #25 Bhlhe40 (ENSPEMG00000028508) #26 Arl8b (ENSPEMG00000029131) #27 Edem1 (ENSPEMG00000005304) #28 Grm7 (ENSPEMG00000029693) #29 Lmcd1 (ENSPEMG00000013048) #32 Ssu2 (ENSPEMG00000022560) #33 Cav3 (ENSPEMG00000029098) #34 Oxtr (ENSPEMG00000027376) #35 Rad18 (ENSPEMG00000022129) #36 Srgap3 (ENSPEMG00000022268) #37 Thumpd3 (ENSPEMG00000022411) Setd5 (ENSPEMG00000022422) Prairie vole MODERN SPECIES 84 ENSMOCG00000000955 Pdzrn3 (ENSMOCG00000015544) #11 ENSMOCG00000009808 Cntn3 (ENSMOCG00000007453) #12 ENSMOCG00000021562 ENSMOCG00000002512 #13 ENSMOCG00000020899 #13 ENSMOCG00000016932 ENSMOCG00000009333 Cntn6 (ENSMOCG00000005399) #16 Cntn4 (ENSMOCG00000013257) #17 Il5ra (ENSMOCG00000015311) #18 Trnt1 (ENSMOCG00000004539) #19 Crbn (ENSMOCG00000019318) #20 Lrrn1 (ENSMOCG00000001702) #21 Setmar (ENSMOCG00000003026) #22 Sumf1 (ENSMOCG00000014598) #23 Itpr1 (ENSMOCG00000002247) #24 Bhlhe40 (ENSMOCG00000014385) #26 Arl8b (ENSMOCG00000018769) #27 Edem1 (ENSMOCG00000020129) #28 ENSMOCG00000009387 ENSMOCG00000016285 ENSMOCG00000020138 Grm7 (ENSMOCG00000016029) #29 Lmcd1 (ENSMOCG00000013328) #32 Ssu2 (ENSMOCG00000006487) #33 Cav3 (ENSMOCG00000002186) #34 OXTR (ENSMOCG00000002867) #35 Rad18 (ENSMOCG00000009114) #36 Srgap3 (ENSMOCG00000001918) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1692 ENSNGAG00000000188 Cntn4 (ENSNGAG00000000209) #17 Il5ra (ENSNGAG00000008379) #18 Trnt1 (ENSNGAG00000000537) #19 Crbn (ENSNGAG00000005594) #20 ENSNGAG00000016208 Lrrn1 (ENSNGAG00000000839) #21 Setmar (ENSNGAG00000012182) #22 Sumf1 (ENSNGAG00000015609) #23 Itpr1 (ENSNGAG00000010432) #24 Bhlhe40 (ENSNGAG00000000305) #26 Arl8b (ENSNGAG00000012594) #27 Edem1 (ENSNGAG00000017076) #28 Lesser Egyptian jerboa MODERN SPECIES 45 Gxylt2 (ENSJJAG00000013774) #9 ENSJJAG00000022712 Pdzrn3 (ENSJJAG00000000291) #11 Cntn3 (ENSJJAG00000012448) #12 ENSJJAG00000000622 Chl1 (ENSJJAG00000020689) #13 ENSJJAG00000017679 Cntn6 (ENSJJAG00000013679) #16 ENSJJAG00000010075 Cntn4 (ENSJJAG00000023102) #17 Il5ra (ENSJJAG00000010396) #18 Trnt1 (ENSJJAG00000018561) #19 Crbn (ENSJJAG00000011234) #20 ENSJJAG00000004639 Lrrn1 (ENSJJAG00000021670) #21 Setmar (ENSJJAG00000024359) #22 Sumf1 (ENSJJAG00000014950) #23 Itpr1 (ENSJJAG00000021325) #24 ENSJJAG00000015303 ENSJJAG00000022672 #26 Arl8b (ENSJJAG00000017608) #27 Edem1 (ENSJJAG00000007371) #28 ENSJJAG00000015222 ENSJJAG00000017538 Grm7 (ENSJJAG00000023200) #29 ENSJJAG00000016367 Lmcd1 (ENSJJAG00000016825) #32 Ssu2 (ENSJJAG00000023516) #33 Cav3 (ENSJJAG00000024313) #34 Oxtr (ENSJJAG00000016459) #35 ENSJJAG00000021410 Kangaroo rat MODERN SPECIES 331 Eif4e3 (ENSDORG00000006531) Prok2 (ENSDORG00000006150) Rybp (ENSDORG00000015021) ENSDORG00000029850 #7 Gxylt2 (ENSDORG00000010918) #9 ENSDORG00000023761 #10 Pdzrn3 (ENSDORG00000002686) #11 Cntn3 (ENSDORG00000000121) #12 Chl1 (ENSDORG00000010546) #13 Cntn6 (ENSDORG00000005702) #16 Cntn4 (ENSDORG00000014028) #17 Il5ra (ENSDORG00000014033) #18 Trnt1 (ENSDORG00000014035) #19 Crbn (ENSDORG00000014038) #20 Lrrn1 (ENSDORG00000023814) #21 Setmar (ENSDORG00000026212) #22 Sumf1 (ENSDORG00000006695) #23 Itpr1 (ENSDORG00000005966) #24 Bhlhe40 (ENSDORG00000028127) #26 Arl8b (ENSDORG00000023904) #27 Edem1 (ENSDORG00000002004) #28 Grm7 (ENSDORG00000007450) #29 Lmcd1 (ENSDORG00000003932) #32 Ssu2 (ENSDORG00000009888) #33 Cav3 (ENSDORG00000023359) #34 Oxtr (ENSDORG00000007711) #35 ENSDORG00000029722 Rad18 (ENSDORG00000001099) #36 ENSDORG00000001101 #37 Thumpd3 (ENSDORG00000003257) Setd5 (ENSDORG00000003260) Rodentia_A ANCESTRAL SPECIES 27 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Hystricomorpha ANCESTRAL SPECIES 34 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 Hystricomorpha_a ANCESTRAL SPECIES 45 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 Hystricomorpha_b ANCESTRAL SPECIES 42 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000154607.b.a.n ENSGT00940000162395 ENSGT01030000234626.C.i.b ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 Long-tailed chinchilla MODERN SPECIES 128 EIF4E3 (ENSCLAG00000003818) PROK2 (ENSCLAG00000003618) RYBP (ENSCLAG00000006008) SHQ1 (ENSCLAG00000004206) #7 GXYLT2 (ENSCLAG00000003908) #9 PPP4R2 (ENSCLAG00000003231) PDZRN3 (ENSCLAG00000010964) #11 CNTN3 (ENSCLAG00000009614) #12 CHL1 (ENSCLAG00000006459) #13 CNTN6 (ENSCLAG00000008602) #16 CNTN4 (ENSCLAG00000006463) #17 IL5RA (ENSCLAG00000005656) #18 TRNT1 (ENSCLAG00000005186) #19 CRBN (ENSCLAG00000004930) #20 LRRN1 (ENSCLAG00000004896) #21 ENSCLAG00000005640 #22 SUMF1 (ENSCLAG00000004509) #23 ITPR1 (ENSCLAG00000009445) #24 BHLHE40 (ENSCLAG00000003841) #26 ARL8B (ENSCLAG00000003184) #27 EDEM1 (ENSCLAG00000004922) #28 GRM7 (ENSCLAG00000004216) #29 ENSCLAG00000003666 SLC22A14 (ENSCLAG00000003320) ENSCLAG00000003124 DLEC1 (ENSCLAG00000006229) PLCD1 (ENSCLAG00000005079) VILL (ENSCLAG00000005376) CTDSPL (ENSCLAG00000004547) ITGA9 (ENSCLAG00000004058) GOLGA4 (ENSCLAG00000005913) Degu MODERN SPECIES 71 ENSODEG00000006984 PDZRN3 (ENSODEG00000008618) #11 CNTN3 (ENSODEG00000006512) #12 ENSODEG00000019392 CHL1 (ENSODEG00000010169) #13 ENSODEG00000019383 ENSODEG00000007284 CNTN6 (ENSODEG00000006499) #16 CNTN4 (ENSODEG00000007155) #17 IL5RA (ENSODEG00000006715) #18 TRNT1 (ENSODEG00000007597) #19 ENSODEG00000008720 #20 ENSODEG00000006737 LRRN1 (ENSODEG00000007430) #21 ENSODEG00000007585 ENSODEG00000006593 #22 SUMF1 (ENSODEG00000007677) #23 ITPR1 (ENSODEG00000007250) #24 ENSODEG00000008843 #26 ARL8B (ENSODEG00000009293) #27 EDEM1 (ENSODEG00000009933) #28 ENSODEG00000019586 Guinea pig MODERN SPECIES 16 PROK2 (ENSCPOG00000033908) RYBP (ENSCPOG00000032177) SHQ1 (ENSCPOG00000011443) #7 GXYLT2 (ENSCPOG00000000442) #9 ENSCPOG00000030150 PPP4R2 (ENSCPOG00000036245) PDZRN3 (ENSCPOG00000030488) #11 CNTN3 (ENSCPOG00000003218) #12 CHL1 (ENSCPOG00000014986) #13 CNTN6 (ENSCPOG00000001124) #16 CNTN4 (ENSCPOG00000026863) #17 Il5ra (ENSCPOG00000007845) #18 TRNT1 (ENSCPOG00000007849) #19 CRBN (ENSCPOG00000007851) #20 LRRN1 (ENSCPOG00000006583) #21 ENSCPOG00000019854 #22 SUMF1 (ENSCPOG00000014854) #23 ITPR1 (ENSCPOG00000005053) #24 BHLHE40 (ENSCPOG00000004014) #26 ENSCPOG00000002434 ENSCPOG00000020709 ARL8B (ENSCPOG00000031098) #27 EDEM1 (ENSCPOG00000031536) #28 GRM7 (ENSCPOG00000001886) #29 DLEC1 (ENSCPOG00000008859) PLCD1 (ENSCPOG00000000596) VILL (ENSCPOG00000029985) CTDSPL (ENSCPOG00000000592) ITGA9 (ENSCPOG00000014650) GOLGA4 (ENSCPOG00000008525) LRRFIP2 (ENSCPOG00000038703) Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000041034 ENSHGLG00000038372 ENSHGLG00000003660 ENSHGLG00000032578 ENSHGLG00000002080 #12 ENSHGLG00000042664 ENSHGLG00000003621 #13 CNTN6 (ENSHGLG00000003847) #16 ENSHGLG00000038160 CNTN4 (ENSHGLG00000006279) #17 IL5RA (ENSHGLG00000003211) #18 ENSHGLG00000003649 #19 CRBN (ENSHGLG00000003957) #20 ENSHGLG00000002667 LRRN1 (ENSHGLG00000002701) #21 ENSHGLG00000049868 #22 ENSHGLG00000003230 #23 ENSHGLG00000004549 #24 ENSHGLG00000003679 #26 ENSHGLG00000033324 ENSHGLG00000048183 ENSHGLG00000042322 ENSHGLG00000039470 ENSHGLG00000002002 ENSHGLG00000001846 #27 ENSHGLG00000002073 #28 ENSHGLG00000050895 ENSHGLG00000044283 ENSHGLG00000042623 ENSHGLG00000046070 ENSHGLG00000040264 Sciuridae ANCESTRAL SPECIES 41 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Eurasian red squirrel MODERN SPECIES 10 RYBP (ENSSVLG00005010589) SHQ1 (ENSSVLG00005010502) #7 GXYLT2 (ENSSVLG00005010448) #9 ENSSVLG00005010375 PDZRN3 (ENSSVLG00005010337) #11 ENSSVLG00005010270 CNTN3 (ENSSVLG00005025887) #12 CHL1 (ENSSVLG00005025877) #13 CNTN6 (ENSSVLG00005025861) #16 CNTN4 (ENSSVLG00005025842) #17 IL5RA (ENSSVLG00005025823) #18 TRNT1 (ENSSVLG00005025808) #19 CRBN (ENSSVLG00005025805) #20 ENSSVLG00005025803 LRRN1 (ENSSVLG00005025801) #21 ENSSVLG00005025798 #22 SUMF1 (ENSSVLG00005025792) #23 ITPR1 (ENSSVLG00005025774) #24 BHLHE40 (ENSSVLG00005025741) #26 ENSSVLG00005025728 ARL8B (ENSSVLG00005025718) #27 EDEM1 (ENSSVLG00005025704) #28 ENSSVLG00005025696 ENSSVLG00005025690 ENSSVLG00005025685 GRM7 (ENSSVLG00005025662) #29 LMCD1 (ENSSVLG00005025633) #32 SSUH2 (ENSSVLG00005025613) #33 CAV3 (ENSSVLG00005025604) #34 OXTR (ENSSVLG00005025596) #35 RAD18 (ENSSVLG00005025578) #36 Marmotini ANCESTRAL SPECIES 49 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Marmotini_b ANCESTRAL SPECIES 62 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Arctic ground squirrel MODERN SPECIES 23 CNTN4 (ENSUPAG00010022747) #17 IL5RA (ENSUPAG00010022771) #18 TRNT1 (ENSUPAG00010022775) #19 CRBN (ENSUPAG00010022777) #20 LRRN1 (ENSUPAG00010022779) #21 ENSUPAG00010022780 #22 SUMF1 (ENSUPAG00010022782) #23 ITPR1 (ENSUPAG00010022789) #24 BHLHE40 (ENSUPAG00010022838) #26 ARL8B (ENSUPAG00010022842) #27 EDEM1 (ENSUPAG00010022843) #28 GRM7 (ENSUPAG00010022847) #29 ENSUPAG00010022848 LMCD1 (ENSUPAG00010022849) #32 SSUH2 (ENSUPAG00010022850) #33 CAV3 (ENSUPAG00010022852) #34 OXTR (ENSUPAG00010022853) #35 RAD18 (ENSUPAG00010022854) #36 SRGAP3 (ENSUPAG00010022863) #37 THUMPD3 (ENSUPAG00010022869) SETD5 (ENSUPAG00010022873) Squirrel MODERN SPECIES 177 CHL1 (ENSSTOG00000003470) #13 CNTN6 (ENSSTOG00000010495) #16 CNTN4 (ENSSTOG00000000147) #17 IL5RA (ENSSTOG00000007367) #18 TRNT1 (ENSSTOG00000000150) #19 CRBN (ENSSTOG00000028102) #20 LRRN1 (ENSSTOG00000020406) #21 ENSSTOG00000025520 #22 SUMF1 (ENSSTOG00000022603) #23 ITPR1 (ENSSTOG00000012015) #24 BHLHE40 (ENSSTOG00000000793) #26 ARL8B (ENSSTOG00000009294) #27 EDEM1 (ENSSTOG00000009304) #28 ENSSTOG00000024514 #29 Alpin marmot MODERN SPECIES 40 ENSMMMG00000006861 PROK2 (ENSMMMG00000006869) RYBP (ENSMMMG00000006873) SHQ1 (ENSMMMG00000006887) #7 GXYLT2 (ENSMMMG00000006933) #9 ENSMMMG00000006977 #10 PDZRN3 (ENSMMMG00000006989) #11 CNTN3 (ENSMMMG00000007027) #12 CHL1 (ENSMMMG00000007097) #13 CNTN6 (ENSMMMG00000007205) #16 CNTN4 (ENSMMMG00000007297) #17 IL5RA (ENSMMMG00000007442) #18 TRNT1 (ENSMMMG00000007463) #19 CRBN (ENSMMMG00000007485) #20 LRRN1 (ENSMMMG00000007534) #21 ENSMMMG00000007561 #22 SUMF1 (ENSMMMG00000007589) #23 ITPR1 (ENSMMMG00000007640) #24 BHLHE40 (ENSMMMG00000007823) #26 ARL8B (ENSMMMG00000007850) #27 EDEM1 (ENSMMMG00000007881) #28 GRM7 (ENSMMMG00000008319) #29 LMCD1 (ENSMMMG00000008370) #32 SSUH2 (ENSMMMG00000008390) #33 CAV3 (ENSMMMG00000008414) #34 OXTR (ENSMMMG00000008417) #35 RAD18 (ENSMMMG00000008426) #36 SRGAP3 (ENSMMMG00000008489) #37 THUMPD3 (ENSMMMG00000008539) SETD5 (ENSMMMG00000008559) LHFPL4 (ENSMMMG00000008628) Lagomorpha ANCESTRAL SPECIES 169 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 Rabbit MODERN SPECIES 436 ENSOCUG00000023199 CHL1 (ENSOCUG00000004486) #13 ENSOCUG00000037666 CNTN6 (ENSOCUG00000012763) #16 CNTN4 (ENSOCUG00000011025) #17 ENSOCUG00000015601 #18 TRNT1 (ENSOCUG00000008580) #19 CRBN (ENSOCUG00000025795) #20 LRRN1 (ENSOCUG00000023697) #21 ENSOCUG00000036915 ENSOCUG00000036153 ENSOCUG00000026652 #22 SUMF1 (ENSOCUG00000012348) #23 ITPR1 (ENSOCUG00000012148) #24 ENSOCUG00000015177 #26 ENSOCUG00000014090 #27 EDEM1 (ENSOCUG00000014098) #28 ENSOCUG00000039475 #29 GRM7 (ENSOCUG00000017426) #29 ENSOCUG00000024911 LMCD1 (ENSOCUG00000010136) #32 SSUH2 (ENSOCUG00000014613) #33 CAV3 (ENSOCUG00000005950) #34 RAD18 (ENSOCUG00000000013) #36 Primates ANCESTRAL SPECIES 1 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Lemuriformes ANCESTRAL SPECIES 73 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 Mouse lemur MODERN SPECIES 18 KIAA1191 (ENSMICG00000037293) ENSMICG00000036088 SIMC1 (ENSMICG00000015305) ENSMICG00000028441 CPLX2 (ENSMICG00000047802) HRH2 (ENSMICG00000003318) ENSMICG00000030242 DRD1 (ENSMICG00000042729) GRM7 (ENSMICG00000010596) #29 CNTN4 (ENSMICG00000016581) #17 IL5RA (ENSMICG00000046178) #18 TRNT1 (ENSMICG00000016615) #19 CRBN (ENSMICG00000016619) #20 LRRN1 (ENSMICG00000038690) #21 ENSMICG00000030917 ENSMICG00000032203 #22 SUMF1 (ENSMICG00000016631) #23 ITPR1 (ENSMICG00000004656) ##24 BHLHE40 (ENSMICG00000043220) #26 ENSMICG00000029477 #27 EDEM1 (ENSMICG00000000246) #28 Lemuriformes_a ANCESTRAL SPECIES 122 ENSGT00390000018596.A.a.a ENSGT00390000005596 ENSGT00940000161421 ENSGT00730000111286 ENSGT00940000160255 ENSGT00730000111360 ENSGT00390000005780.b ENSGT00390000016970 ENSGT00390000000631 ENSGT00390000011082 ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 700 ENSPSMG00000004944 NBEAL2 (ENSPSMG00000004931) CCDC12 (ENSPSMG00000004882) PTH1R (ENSPSMG00000004789) MYL3 (ENSPSMG00000004712) ENSPSMG00000004697 ENSPSMG00000004689 ENSPSMG00000004660 ENSPSMG00000004649 PRSS50 (ENSPSMG00000004628) TMIE (ENSPSMG00000004622) ALS2CL (ENSPSMG00000004599) FAM240A (ENSPSMG00000004513) LRRC2 (ENSPSMG00000004505) RTP3 (ENSPSMG00000004488) ENSPSMG00000004468 #22 POMGNT2 (ENSPSMG00000004465) Greater bamboo lemur MODERN SPECIES 1330 ENSPSMG00000008526 #22 ENSPSMG00000008535 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 466 ACTR3 (ENSPCOG00000024400) SLC35F5 (ENSPCOG00000028424) GPR39 (ENSPCOG00000023485) LYPD1 (ENSPCOG00000020233) ENSPCOG00000014180 #22 NCKAP5 (ENSPCOG00000015437) MGAT5 (ENSPCOG00000019388) TMEM163 (ENSPCOG00000003562) ACMSD (ENSPCOG00000009868) CCNT2 (ENSPCOG00000024166) MAP3K19 (ENSPCOG00000013448) RAB3GAP1 (ENSPCOG00000013566) ENSPCOG00000017303 ZRANB3 (ENSPCOG00000003732) R3HDM1 (ENSPCOG00000012698) UBXN4 (ENSPCOG00000023917) LCT (ENSPCOG00000025001) MCM6 (ENSPCOG00000019502) DARS1 (ENSPCOG00000008377) CXCR4 (ENSPCOG00000024213) Coquerels sifaka MODERN SPECIES 78 RPUSD3 (ENSPCOG00000018314) CIDEC (ENSPCOG00000022675) JAGN1 (ENSPCOG00000023783) IL17RE (ENSPCOG00000020006) IL17RC (ENSPCOG00000021923) CRELD1 (ENSPCOG00000025122) PRRT3 (ENSPCOG00000015921) EMC3 (ENSPCOG00000026029) FANCD2 (ENSPCOG00000014162) BRK1 (ENSPCOG00000020671) VHL (ENSPCOG00000019013) IRAK2 (ENSPCOG00000021515) TATDN2 (ENSPCOG00000025647) GHRL (ENSPCOG00000026754) SEC13 (ENSPCOG00000008292) ENSPCOG00000019692 #22 SUMF1 (ENSPCOG00000014210) #23 ITPR1 (ENSPCOG00000024735) #24 BHLHE40 (ENSPCOG00000013862) #26 ARL8B (ENSPCOG00000013027) #27 EDEM1 (ENSPCOG00000022489) #28 Bushbaby MODERN SPECIES 130 ENSOGAG00000033425 ENSOGAG00000030955 SHQ1 (ENSOGAG00000003898) #7 GXYLT2 (ENSOGAG00000006647) #9 PPP4R2 (ENSOGAG00000011001) PDZRN3 (ENSOGAG00000031641) #11 CNTN3 (ENSOGAG00000017171) #12 CHL1 (ENSOGAG00000012057) #13 CNTN6 (ENSOGAG00000002731) #16 CNTN4 (ENSOGAG00000007059) #17 IL5RA (ENSOGAG00000007069) #18 CRBN (ENSOGAG00000007077) #20 ENSOGAG00000033945 ENSOGAG00000030861 LRRN1 (ENSOGAG00000027599) #21 ENSOGAG00000024973 #22 SUMF1 (ENSOGAG00000003702) #23 ITPR1 (ENSOGAG00000003704) #24 BHLHE40 (ENSOGAG00000029762) #26 ARL8B (ENSOGAG00000026863) #27 EDEM1 (ENSOGAG00000003714) #28 ENSOGAG00000025402 ENSOGAG00000034686 #29 ENSOGAG00000025792 GRM7 (ENSOGAG00000004355) #29 ENSOGAG00000027930 LMCD1 (ENSOGAG00000009965) #32 SSUH2 (ENSOGAG00000009967) #33 ENSOGAG00000032668 ENSOGAG00000027853 CAV3 (ENSOGAG00000027025) #34 Haplorrhini ANCESTRAL SPECIES ENSGT00940000162663 #22 Tarsier MODERN SPECIES 4464 ENSTSYG00000026622 #22 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Cetacea ANCESTRAL SPECIES 7 ENSGT00390000013995.b.a ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Odontoceti ANCESTRAL SPECIES 5 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000168733 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Monodontidae ANCESTRAL SPECIES 4 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000168733 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00940000154194.kb.b ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Narwhal MODERN SPECIES 310 PPP4R2 (ENSMMNG00015020763) ENSMMNG00015020797 PDZRN3 (ENSMMNG00015020829) #11 ENSMMNG00015020925 ENSMMNG00015020932 CNTN3 (ENSMMNG00015020954) #12 ENSMMNG00015020993 CHL1 (ENSMMNG00015021112) #13 CNTN6 (ENSMMNG00015021308) #16 ENSMMNG00015021339 CNTN4 (ENSMMNG00015021354) #17 IL5RA (ENSMMNG00015021373) #18 TRNT1 (ENSMMNG00015021404) #19 CRBN (ENSMMNG00015021425) #20 LRRN1 (ENSMMNG00015021441) #21 ENSMMNG00015021455 #22 SUMF1 (ENSMMNG00015021480) #23 ITPR1 (ENSMMNG00015021764) #24 BHLHE40 (ENSMMNG00015021940) #26 EDEM1 (ENSMMNG00015021945) #28 ENSMMNG00015021948 GRM7 (ENSMMNG00015021949) #29 ENSMMNG00015021951 LMCD1 (ENSMMNG00015021953) #32 SSUH2 (ENSMMNG00015021955) #33 CAV3 (ENSMMNG00015021970) #34 OXTR (ENSMMNG00015021973) #35 RAD18 (ENSMMNG00015021977) #36 SRGAP3 (ENSMMNG00015021982) #37 THUMPD3 (ENSMMNG00015021984) SETD5 (ENSMMNG00015009941) Beluga whale MODERN SPECIES 28 SHQ1 (ENSDLEG00000007662) #7 PPP4R2 (ENSDLEG00000007632) #9 ENSDLEG00000007621 PDZRN3 (ENSDLEG00000007615) #11 ENSDLEG00000007610 CNTN3 (ENSDLEG00000007338) #12 ENSDLEG00000007271 CHL1 (ENSDLEG00000007131) #13 CNTN6 (ENSDLEG00000004824) #16 ENSDLEG00000004457 CNTN4 (ENSDLEG00000004410) #17 IL5RA (ENSDLEG00000004345) #18 TRNT1 (ENSDLEG00000004312) #19 CRBN (ENSDLEG00000004288) #20 LRRN1 (ENSDLEG00000004270) #21 ENSDLEG00000004264 #22 SUMF1 (ENSDLEG00000004213) #23 ITPR1 (ENSDLEG00000003511) #24 BHLHE40 (ENSDLEG00000003345) #26 ARL8B (ENSDLEG00000003337) #27 EDEM1 (ENSDLEG00000003247) #28 ENSDLEG00000003215 Vaquita MODERN SPECIES 2 GXYLT2 (ENSPSNG00000022011) #9 PPP4R2 (ENSPSNG00000021989) ENSPSNG00000021970 PDZRN3 (ENSPSNG00000021932) #11 ENSPSNG00000021907 CNTN3 (ENSPSNG00000021869) #12 ENSPSNG00000021840 CHL1 (ENSPSNG00000021694) #13 CNTN6 (ENSPSNG00000021579) #16 ENSPSNG00000021554 CNTN4 (ENSPSNG00000021522) #17 IL5RA (ENSPSNG00000021430) #18 TRNT1 (ENSPSNG00000021385) #19 CRBN (ENSPSNG00000021316) #20 LRRN1 (ENSPSNG00000021271) #21 ENSPSNG00000021260 #22 SUMF1 (ENSPSNG00000021203) #23 ITPR1 (ENSPSNG00000020755) #24 BHLHE40 (ENSPSNG00000020577) #26 ARL8B (ENSPSNG00000020515) #27 EDEM1 (ENSPSNG00000020473) #28 ENSPSNG00000020429 ENSPSNG00000020416 GRM7 (ENSPSNG00000020266) #29 LMCD1 (ENSPSNG00000020193) #32 SSUH2 (ENSPSNG00000020116) #33 CAV3 (ENSPSNG00000020071) #34 OXTR (ENSPSNG00000020047) #35 RAD18 (ENSPSNG00000019957) #36 SRGAP3 (ENSPSNG00000019609) #37 THUMPD3 (ENSPSNG00000019527) Sperm whale MODERN SPECIES 9 PPP4R2 (ENSPCTG00005017140) ENSPCTG00005017126 ENSPCTG00005017078 PDZRN3 (ENSPCTG00005016884) #11 ENSPCTG00005016762 CNTN3 (ENSPCTG00005016649) #12 ENSPCTG00005016580 CHL1 (ENSPCTG00005016433) #13 ENSPCTG00005016393 CNTN6 (ENSPCTG00005016124) #16 CNTN4 (ENSPCTG00005011901) #17 IL5RA (ENSPCTG00005011305) #18 TRNT1 (ENSPCTG00005011251) #19 CRBN (ENSPCTG00005011120) #20 LRRN1 (ENSPCTG00005011097) #21 ENSPCTG00005011064 #22 SUMF1 (ENSPCTG00005010949) #23 ENSPCTG00005010893 #24 BHLHE40 (ENSPCTG00005010857) #26 ARL8B (ENSPCTG00005010834) #27 EDEM1 (ENSPCTG00005010722) #28 ENSPCTG00005010694 ENSPCTG00005010665 GRM7 (ENSPCTG00005010372) #29 ENSPCTG00005010301 ENSPCTG00005010267 #34 CAV3 (ENSPCTG00005010229) #34 OXTR (ENSPCTG00005010180) #35 RAD18 (ENSPCTG00005009968) #36 THUMPD3 (ENSPCTG00005009829) SETD5 (ENSPCTG00005009250) Blue whale MODERN SPECIES 2 SHQ1 (ENSBMSG00010021956) #7 GXYLT2 (ENSBMSG00010021967) #9 PPP4R2 (ENSBMSG00010021970) PDZRN3 (ENSBMSG00010021981) #11 ENSBMSG00010021985 ENSBMSG00010021989 CNTN3 (ENSBMSG00010021994) #12 ENSBMSG00010022002 CHL1 (ENSBMSG00010022027) #13 CNTN6 (ENSBMSG00010022054) #16 CNTN4 (ENSBMSG00010022067) #17 IL5RA (ENSBMSG00010022077) #18 TRNT1 (ENSBMSG00010022089) #19 CRBN (ENSBMSG00010022093) #20 LRRN1 (ENSBMSG00010022098) #21 ENSBMSG00010022101 #22 SUMF1 (ENSBMSG00010022107) #23 ENSBMSG00010022122 #24 BHLHE40 (ENSBMSG00010022124) #26 ARL8B (ENSBMSG00010022125) #27 EDEM1 (ENSBMSG00010022127) #28 GRM7 (ENSBMSG00010022139) #29 ENSBMSG00010022144 LMCD1 (ENSBMSG00010022145) #32 SSUH2 (ENSBMSG00010022152) #33 CAV3 (ENSBMSG00010022159) #34 OXTR (ENSBMSG00010022161) #35 RAD18 (ENSBMSG00010022168) #36 SRGAP3 (ENSBMSG00010022181) #37 THUMPD3 (ENSBMSG00010022188) SETD5 (ENSBMSG00010022193) Pecora ANCESTRAL SPECIES 17 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Yarkand deer MODERN SPECIES 16 GXYLT2 (ENSCHYG00000026357) #9 PPP4R2 (ENSCHYG00000026369) PDZRN3 (ENSCHYG00000026403) #11 CNTN3 (ENSCHYG00000026470) #12 CHL1 (ENSCHYG00000026559) #13 ENSCHYG00000026610 CNTN6 (ENSCHYG00000026622) #16 ENSCHYG00000026685 ENSCHYG00000026687 CNTN4 (ENSCHYG00000026696) #17 IL5RA (ENSCHYG00000026716) #18 TRNT1 (ENSCHYG00000026731) #19 CRBN (ENSCHYG00000026738) #20 ENSCHYG00000026754 ENSCHYG00000026764 ENSCHYG00000026769 #22 SUMF1 (ENSCHYG00000026779) #23 ITPR1 (ENSCHYG00000026821) #24 BHLHE40 (ENSCHYG00000026844) #26 ARL8B (ENSCHYG00000026850) #27 EDEM1 (ENSCHYG00000026855) #28 ENSCHYG00000026863 GRM7 (ENSCHYG00000026874) #29 LMCD1 (ENSCHYG00000026896) #32 SSUH2 (ENSCHYG00000026901) #33 CAV3 (ENSCHYG00000026911) #34 OXTR (ENSCHYG00000026918) #35 RAD18 (ENSCHYG00000026923) #36 SRGAP3 (ENSCHYG00000013878) #37 THUMPD3 (ENSCHYG00000014272) SETD5 (ENSCHYG00000014430) Percora_a ANCESTRAL SPECIES 19 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Siberian musk deer MODERN SPECIES 1217 CNTN6 (ENSMMSG00000023002) #16 ENSMMSG00000023026 CNTN4 (ENSMMSG00000023037) #17 IL5RA (ENSMMSG00000023050) #18 TRNT1 (ENSMMSG00000023102) #19 CRBN (ENSMMSG00000023112) #20 LRRN1 (ENSMMSG00000023149) #21 ENSMMSG00000023154 #22 SUMF1 (ENSMMSG00000023161) #23 ITPR1 (ENSMMSG00000023236) #24 BHLHE40 (ENSMMSG00000023362) #26 ARL8B (ENSMMSG00000023368) #27 EDEM1 (ENSMMSG00000023381) #28 GRM7 (ENSMMSG00000023416) #29 ENSMMSG00000023445 LMCD1 (ENSMMSG00000023464) #32 SSUH2 (ENSMMSG00000023483) #33 CAV3 (ENSMMSG00000023491) #34 OXTR (ENSMMSG00000023495) #35 RAD18 (ENSMMSG00000023505) #36 SRGAP3 (ENSMMSG00000023532) #37 THUMPD3 (ENSMMSG00000023573) SETD5 (ENSMMSG00000023589) Bovidae ANCESTRAL SPECIES 19 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Caprinae ANCESTRAL SPECIES 15 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Rambouillet Sheep MODERN SPECIES 10 PROK2 (ENSOARG00020017771) RYBP (ENSOARG00020017720) SHQ1 (ENSOARG00020017477) #7 GXYLT2 (ENSOARG00020017381) #9 PPP4R2 (ENSOARG00020017177) PDZRN3 (ENSOARG00020016919) #11 CNTN3 (ENSOARG00020016622) #12 CHL1 (ENSOARG00020015831) #13 CNTN6 (ENSOARG00020015543) #16 ENSOARG00020015490 CNTN4 (ENSOARG00020015064) #17 TRNT1 (ENSOARG00020014826) #19 CRBN (ENSOARG00020014355) #20 ENSOARG00020014311 LRRN1 (ENSOARG00020014291) #21 ENSOARG00020014205 #22 SUMF1 (ENSOARG00020014038) #23 ITPR1 (ENSOARG00020012519) #24 BHLHE40 (ENSOARG00020012417) #26 ARL8B (ENSOARG00020012288) #27 EDEM1 (ENSOARG00020012137) #28 ENSOARG00020012075 GRM7 (ENSOARG00020011716) #29 LMCD1 (ENSOARG00020011551) #32 SSUH2 (ENSOARG00020011381) #33 CAV3 (ENSOARG00020011348) #34 OXTR (ENSOARG00020011329) #35 RAD18 (ENSOARG00020011184) #36 SRGAP3 (ENSOARG00020010228) #37 THUMPD3 (ENSOARG00020025485) SETD5 (ENSOARG00020025409) Goat MODERN SPECIES 14 RYBP (ENSCHIG00000026041) SHQ1 (ENSCHIG00000012271) #7 GXYLT2 (ENSCHIG00000011713) #9 PPP4R2 (ENSCHIG00000006838) PDZRN3 (ENSCHIG00000018984) #11 ENSCHIG00000022511 CNTN3 (ENSCHIG00000015485) #12 CHL1 (ENSCHIG00000015409) #13 CNTN6 (ENSCHIG00000024913) #16 CNTN4 (ENSCHIG00000018077) #17 IL5RA (ENSCHIG00000011708) #18 TRNT1 (ENSCHIG00000007030) #19 CRBN (ENSCHIG00000022897) #20 ENSCHIG00000017211 LRRN1 (ENSCHIG00000009563) #21 ENSCHIG00000019739 #22 SUMF1 (ENSCHIG00000026539) #23 ITPR1 (ENSCHIG00000018318) #24 BHLHE40 (ENSCHIG00000014557) #26 ARL8B (ENSCHIG00000011960) #27 EDEM1 (ENSCHIG00000011192) #28 ENSCHIG00000008494 #29 ENSCHIG00000021691 GRM7 (ENSCHIG00000000474) #29 LMCD1 (ENSCHIG00000012706) #32 SSUH2 (ENSCHIG00000021708) #33 CAV3 (ENSCHIG00000010009) #34 OXTR (ENSCHIG00000007774) #35 RAD18 (ENSCHIG00000007965) #36 ENSCHIG00000016941 SRGAP3 (ENSCHIG00000019201) #37 Bovinae ANCESTRAL SPECIES 16 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Bos ANCESTRAL SPECIES 16 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 #13 ENSGT00940000160606.b #16 ENSGT00940000160606.a.a #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000162732 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861.b #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Bos_a ANCESTRAL SPECIES 9 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 #13 ENSGT00940000160606.b #16 ENSGT00940000160606.a.a #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000162732 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861.b #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Wild yak MODERN SPECIES 787 LRRN1 (ENSBMUG00000014171) #21 ENSBMUG00000014196 #22 ENSBMUG00000014207 SUMF1 (ENSBMUG00000014275) #23 ITPR1 (ENSBMUG00000015280) #24 BHLHE40 (ENSBMUG00000015950) #26 ARL8B (ENSBMUG00000015997) #27 EDEM1 (ENSBMUG00000016011) #28 Domestic yak MODERN SPECIES 14 ENSBGRG00000022179 CNTN3 (ENSBGRG00000022216) #12 ENSBGRG00000022415 CHL1 (ENSBGRG00000022502) #13 CNTN6 (ENSBGRG00000022913) #16 ENSBGRG00000022946 ENSBGRG00000022956 CNTN4 (ENSBGRG00000023008) #17 IL5RA (ENSBGRG00000023363) #18 TRNT1 (ENSBGRG00000023414) #19 ENSBGRG00000023555 CRBN (ENSBGRG00000023591) #20 LRRN1 (ENSBGRG00000023800) #21 ENSBGRG00000023820 ENSBGRG00000023834 ENSBGRG00000023871 #22 ENSBGRG00000023884 SUMF1 (ENSBGRG00000023916) #23 ITPR1 (ENSBGRG00000024500) #24 BHLHE40 (ENSBGRG00000026121) #26 ARL8B (ENSBGRG00000026129) #27 EDEM1 (ENSBGRG00000026138) #28 GRM7 (ENSBGRG00000026154) #29 ENSBGRG00000026180 ENSBGRG00000026184 LMCD1 (ENSBGRG00000006947) #32 SSUH2 (ENSBGRG00000007163) #33 CAV3 (ENSBGRG00000007247) #34 OXTR (ENSBGRG00000007298) #35 RAD18 (ENSBGRG00000007350) #36 SRGAP3 (ENSBGRG00000007703) #37 Bos_b ANCESTRAL SPECIES 17 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.a.b ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 #13 ENSGT00940000160606.a.a #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000162732 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861.b #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Cow MODERN SPECIES 14 ENSBTAG00000054670 RYBP (ENSBTAG00000022689) SHQ1 (ENSBTAG00000005436) #7 GXYLT2 (ENSBTAG00000020481) #9 PPP4R2 (ENSBTAG00000002147) PDZRN3 (ENSBTAG00000018644) #11 CNTN3 (ENSBTAG00000007615) #12 CHL1 (ENSBTAG00000002471) #13 ENSBTAG00000006727 CNTN6 (ENSBTAG00000003592) #16 CNTN4 (ENSBTAG00000033225) #17 IL5RA (ENSBTAG00000000273) #18 TRNT1 (ENSBTAG00000019534) #19 CRBN (ENSBTAG00000019536) #20 LRRN1 (ENSBTAG00000001176) #21 SETMAR (ENSBTAG00000018935) #22 ENSBTAG00000034496 SUMF1 (ENSBTAG00000039855) #23 ITPR1 (ENSBTAG00000020455) #24 BHLHE40 (ENSBTAG00000009863) #26 ARL8B (ENSBTAG00000012902) #27 ENSBTAG00000052329 #27 EDEM1 (ENSBTAG00000012904) #28 GRM7 (ENSBTAG00000013047) #29 LMCD1 (ENSBTAG00000005431) #32 SSUH2 (ENSBTAG00000005433) #33 CAV3 (ENSBTAG00000022699) #34 OXTR (ENSBTAG00000019772) #35 RAD18 (ENSBTAG00000012142) #36 SRGAP3 (ENSBTAG00000004685) #37 THUMPD3 (ENSBTAG00000003112) Hybrid Bos Indicus MODERN SPECIES 14 GXYLT2 (ENSBIXG00005031365) #9 PPP4R2 (ENSBIXG00005031369) PDZRN3 (ENSBIXG00005031380) #11 CNTN3 (ENSBIXG00005031394) #12 ENSBIXG00005031401 CHL1 (ENSBIXG00005031410) #13 ENSBIXG00005031428 CNTN6 (ENSBIXG00005031434) #16 CNTN4 (ENSBIXG00005031442) #17 IL5RA (ENSBIXG00005031445) #18 TRNT1 (ENSBIXG00005031446) #19 CRBN (ENSBIXG00005031447) #20 LRRN1 (ENSBIXG00005031456) #21 ENSBIXG00005031458 SUMF1 (ENSBIXG00005031466) #23 ENSBIXG00005031470 #22 ENSBIXG00005031471 ITPR1 (ENSBIXG00005031482) #24 BHLHE40 (ENSBIXG00005031493) #26 ARL8B (ENSBIXG00005031495) #27 EDEM1 (ENSBIXG00005001970) #28 ENSBIXG00005029056 GRM7 (ENSBIXG00005028996) #29 LMCD1 (ENSBIXG00005005060) #32 SSUH2 (ENSBIXG00005028895) #33 CAV3 (ENSBIXG00005002263) #34 OXTR (ENSBIXG00005028862) #35 RAD18 (ENSBIXG00005002314) #36 SRGAP3 (ENSBIXG00005005347) #37 THUMPD3 (ENSBIXG00005028624) SETD5 (ENSBIXG00005028549) American bison MODERN SPECIES 3113 TRNT1 (ENSBBBG00000006767) #19 CRBN (ENSBBBG00000014614) #20 LRRN1 (ENSBBBG00000007132) #21 ENSBBBG00000014591 #22 SUMF1 (ENSBBBG00000014575) #23 ITPR1 (ENSBBBG00000003374) #24 BHLHE40 (ENSBBBG00000001529) #26 ARL8B (ENSBBBG00000013693) #27 EDEM1 (ENSBBBG00000006878) #28 Camelidae ANCESTRAL SPECIES 7 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Arabian camel MODERN SPECIES 8 RYBP (ENSCDRG00005005642) SHQ1 (ENSCDRG00005005675) #7 GXYLT2 (ENSCDRG00005005730) #9 PPP4R2 (ENSCDRG00005005747) PDZRN3 (ENSCDRG00005005789) #11 CNTN3 (ENSCDRG00005005902) #12 ENSCDRG00005005931 CHL1 (ENSCDRG00005005966) #13 CNTN6 (ENSCDRG00005006079) #16 ENSCDRG00005006107 CNTN4 (ENSCDRG00005006128) #17 TRNT1 (ENSCDRG00005006181) #19 IL5RA (ENSCDRG00005006219) #18 CRBN (ENSCDRG00005006474) #20 LRRN1 (ENSCDRG00005006616) #21 ENSCDRG00005006638 #22 ENSCDRG00005006687 SUMF1 (ENSCDRG00005006754) #23 ITPR1 (ENSCDRG00005006971) #24 BHLHE40 (ENSCDRG00005007592) #26 ARL8B (ENSCDRG00005007624) #27 EDEM1 (ENSCDRG00005007706) #28 ENSCDRG00005007733 GRM7 (ENSCDRG00005007785) #29 LMCD1 (ENSCDRG00005008646) #32 SSUH2 (ENSCDRG00005008739) #33 CAV3 (ENSCDRG00005008785) #34 OXTR (ENSCDRG00005008802) #35 RAD18 (ENSCDRG00005008867) #36 SRGAP3 (ENSCDRG00005009310) #37 THUMPD3 (ENSCDRG00005009741) Suina ANCESTRAL SPECIES 1 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT01000000221469 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Pig MODERN SPECIES 4 ENSSSCG00000047664 CNTN3 (ENSSSCG00000011522) #12 ENSSSCG00000048746 ENSSSCG00000058117 ENSSSCG00000048446 ENSSSCG00000050663 CHL1 (ENSSSCG00000011524) #13 CNTN6 (ENSSSCG00000038152) #16 ENSSSCG00000050505 CNTN4 (ENSSSCG00000011527) #17 IL5RA (ENSSSCG00000011528) #18 TRNT1 (ENSSSCG00000011529) #19 CRBN (ENSSSCG00000011530) #20 ENSSSCG00000041465 LRRN1 (ENSSSCG00000023806) #21 ENSSSCG00000011531 #22 SUMF1 (ENSSSCG00000011532) #23 ITPR1 (ENSSSCG00000023437) #24 BHLHE40 (ENSSSCG00000036136) #26 ARL8B (ENSSSCG00000011535) #27 ENSSSCG00000044623 EDEM1 (ENSSSCG00000034197) #28 GRM7 (ENSSSCG00000023891) #29 LMCD1 (ENSSSCG00000011538) #32 SSUH2 (ENSSSCG00000023082) #33 CAV3 (ENSSSCG00000056902) #34 OXTR (ENSSSCG00000021585) #35 RAD18 (ENSSSCG00000026158) #36 SRGAP3 (ENSSSCG00000033624) #37 THUMPD3 (ENSSSCG00000011542) SETD5 (ENSSSCG00000011540) Chacoan peccary MODERN SPECIES 950 PROK2 (ENSCWAG00000020863) RYBP (ENSCWAG00000020884) SHQ1 (ENSCWAG00000020894) #7 GXYLT2 (ENSCWAG00000020910) #9 PPP4R2 (ENSCWAG00000020926) PDZRN3 (ENSCWAG00000020942) #11 CNTN3 (ENSCWAG00000020972) #12 CHL1 (ENSCWAG00000021043) #13 CNTN6 (ENSCWAG00000021190) #16 ENSCWAG00000021205 CNTN4 (ENSCWAG00000021224) #17 IL5RA (ENSCWAG00000021262) #18 TRNT1 (ENSCWAG00000021303) #19 CRBN (ENSCWAG00000021315) #20 LRRN1 (ENSCWAG00000021333) #21 ENSCWAG00000021337 #22 SUMF1 (ENSCWAG00000021351) #23 ITPR1 (ENSCWAG00000021394) #24 BHLHE40 (ENSCWAG00000021441) #26 ARL8B (ENSCWAG00000021449) #27 EDEM1 (ENSCWAG00000021462) #28 GRM7 (ENSCWAG00000021475) #29 LMCD1 (ENSCWAG00000021516) #32 ENSCWAG00000021523 SSUH2 (ENSCWAG00000021528) #33 CAV3 (ENSCWAG00000021533) #34 OXTR (ENSCWAG00000021536) #35 RAD18 (ENSCWAG00000021543) #36 SRGAP3 (ENSCWAG00000021560) #37 THUMPD3 (ENSCWAG00000021592) SETD5 (ENSCWAG00000021607) Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Carnivora ANCESTRAL SPECIES 6 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Caniformia ANCESTRAL SPECIES 4 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Caniformia_b ANCESTRAL SPECIES 16 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Ursidae ANCESTRAL SPECIES 11 ENSGT00390000013995.b.a ENSGT00940000173944 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00390000000263.fb.a ENSGT00940000160080.b #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Ursus ANCESTRAL SPECIES 43 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E.e #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Polar bear MODERN SPECIES 210 LRRN1 (ENSUMAG00000024226) #21 ENSUMAG00000024224 ENSUMAG00000024223 #22 SUMF1 (ENSUMAG00000024222) #23 ITPR1 (ENSUMAG00000020523) #24 BHLHE40 (ENSUMAG00000019582) #26 ARL8B (ENSUMAG00000019574) #27 EDEM1 (ENSUMAG00000019393) #28 ENSUMAG00000019361 GRM7 (ENSUMAG00000019342) #29 LMCD1 (ENSUMAG00000019308) #32 SSUH2 (ENSUMAG00000019301) #33 CAV3 (ENSUMAG00000019292) #34 ENSUMAG00000019289 #35 RAD18 (ENSUMAG00000019279) #36 ENSUMAG00000019260 #37 THUMPD3 (ENSUMAG00000019241) SETD5 (ENSUMAG00000019048) American black bear MODERN SPECIES 1096 ENSUAMG00000024275 #22 SUMF1 (ENSUAMG00000024276) #23 ENSUAMG00000024337 #24 Giant Panda MODERN SPECIES 14 RYBP (ENSAMEG00000015131) ENSAMEG00000015139 SHQ1 (ENSAMEG00000015140) #7 GXYLT2 (ENSAMEG00000015150) #9 PPP4R2 (ENSAMEG00000015164) PDZRN3 (ENSAMEG00000025975) #11 ENSAMEG00000011395 #12 ENSAMEG00000023576 ENSAMEG00000013402 #13 CNTN6 (ENSAMEG00000014259) #16 CNTN4 (ENSAMEG00000014387) #17 IL5RA (ENSAMEG00000014490) #18 TRNT1 (ENSAMEG00000014520) #19 CRBN (ENSAMEG00000014541) #20 LRRN1 (ENSAMEG00000018835) #21 ENSAMEG00000015893 #22 SUMF1 (ENSAMEG00000015897) #23 ITPR1 (ENSAMEG00000015900) #24 BHLHE40 (ENSAMEG00000016060) #26 ARL8B (ENSAMEG00000026834) #27 EDEM1 (ENSAMEG00000016099) #28 ENSAMEG00000028093 GRM7 (ENSAMEG00000027634) #29 LMCD1 (ENSAMEG00000012319) #32 SSUH2 (ENSAMEG00000012342) #33 CAV3 (ENSAMEG00000026850) #34 RAD18 (ENSAMEG00000012375) #36 SRGAP3 (ENSAMEG00000012398) #37 THUMPD3 (ENSAMEG00000011321) SETD5 (ENSAMEG00000011307) LHFPL4 (ENSAMEG00000029596) Mustelinae ANCESTRAL SPECIES 18 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852.d American mink MODERN SPECIES 259 C9JHK2 (ENSNVIG00000014801) #22 SUMF1 (ENSNVIG00000014740) #23 ENSNVIG00000014725 #25 ITPR1 (ENSNVIG00000013256) #24 BHLHE40 (ENSNVIG00000013166) #26 ARL8B (ENSNVIG00000013147) #27 EDEM1 (ENSNVIG00000013114) #28 Ferret MODERN SPECIES 163 PPP4R2 (ENSMPUG00000017008) PDZRN3 (ENSMPUG00000017009) #11 ENSMPUG00000017010 CNTN3 (ENSMPUG00000017011) #12 ENSMPUG00000020109 ENSMPUG00000017012 CHL1 (ENSMPUG00000017013) #13 ENSMPUG00000020110 CNTN6 (ENSMPUG00000017014) #16 CNTN4 (ENSMPUG00000017015) #17 IL5RA (ENSMPUG00000017016) #18 TRNT1 (ENSMPUG00000017017) #19 CRBN (ENSMPUG00000017018) #20 LRRN1 (ENSMPUG00000020111) #21 ENSMPUG00000017019 ENSMPUG00000017021 #22 SUMF1 (ENSMPUG00000017022) #23 ENSMPUG00000017028 ITPR1 (ENSMPUG00000017024) #24 BHLHE40 (ENSMPUG00000017029) #26 ENSMPUG00000017030 ARL8B (ENSMPUG00000017035) #27 EDEM1 (ENSMPUG00000017042) #28 ENSMPUG00000017055 ENSMPUG00000020112 GRM7 (ENSMPUG00000017057) #29 ENSMPUG00000020113 LMCD1 (ENSMPUG00000017058) #32 SSUH2 (ENSMPUG00000017059) #33 CAV3 (ENSMPUG00000017061) #34 OXTR (ENSMPUG00000017062) #35 Canidae ANCESTRAL SPECIES ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Canis_lupus ANCESTRAL SPECIES 1 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606.d #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00550000074855.u.a.a.a.a.b ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 Dog MODERN SPECIES 12 SHQ1 (ENSCAFG00845007261) #7 GXYLT2 (ENSCAFG00845007149) #9 PPP4R2 (ENSCAFG00845007022) PDZRN3 (ENSCAFG00845006843) #11 CNTN3 (ENSCAFG00845006575) #12 ENSCAFG00845006474 ENSCAFG00845006445 ENSCAFG00845006097 #13 CNTN6 (ENSCAFG00845005936) #16 CNTN4 (ENSCAFG00845012710) #17 IL5RA (ENSCAFG00845012603) #18 TRNT1 (ENSCAFG00845012496) #19 CRBN (ENSCAFG00845012410) #20 ENSCAFG00845012385 LRRN1 (ENSCAFG00845012344) #21 SETMAR (ENSCAFG00845012243) #22 ENSCAFG00845012212 SUMF1 (ENSCAFG00845012121) #23 ITPR1 (ENSCAFG00845011583) #24 BHLHE40 (ENSCAFG00845011295) #26 ARL8B (ENSCAFG00845011245) #27 EDEM1 (ENSCAFG00845011142) #28 ENSCAFG00845011042 GRM7 (ENSCAFG00845010858) #29 LMCD1 (ENSCAFG00845010761) #32 SSUH2 (ENSCAFG00845010670) #33 PSMA1 (ENSCAFG00845010623) CAV3 (ENSCAFG00845010595) #34 OXTR (ENSCAFG00845010546) #35 RAD18 (ENSCAFG00845010415) #36 SRGAP3 (ENSCAFG00845010252) #37 Dingo MODERN SPECIES 236 PDZRN3 (ENSCAFG00020015173) #11 CNTN3 (ENSCAFG00020015151) #12 CHL1 (ENSCAFG00020015069) #13 ENSCAFG00020015018 #16 ENSCAFG00020015005 CNTN4 (ENSCAFG00020014776) #17 IL5RA (ENSCAFG00020014747) #18 TRNT1 (ENSCAFG00020014746) #19 CRBN (ENSCAFG00020014744) #20 LRRN1 (ENSCAFG00020014742) #21 ENSCAFG00020014740 #22 SUMF1 (ENSCAFG00020014738) #23 ITPR1 (ENSCAFG00020009780) #24 BHLHE40 (ENSCAFG00020009373) #26 ARL8B (ENSCAFG00020009368) #27 EDEM1 (ENSCAFG00020009305) #28 ENSCAFG00020009301 ENSCAFG00020009294 #29 GRM7 (ENSCAFG00020009277) #29 LMCD1 (ENSCAFG00020009259) #32 SSUH2 (ENSCAFG00020009247) #33 ENSCAFG00020009244 CAV3 (ENSCAFG00020009240) #34 OXTR (ENSCAFG00020009232) #35 ENSCAFG00020009230 RAD18 (ENSCAFG00020009228) #36 Red fox MODERN SPECIES 5 SHQ1 (ENSVVUG00000013906) #7 GXYLT2 (ENSVVUG00000013899) #9 PPP4R2 (ENSVVUG00000013896) ENSVVUG00000013883 ENSVVUG00000013879 #11 CNTN3 (ENSVVUG00000013866) #12 ENSVVUG00000013836 CHL1 (ENSVVUG00000013809) #13 CNTN6 (ENSVVUG00000013018) #16 CNTN4 (ENSVVUG00000012913) #17 IL5RA (ENSVVUG00000012836) #18 TRNT1 (ENSVVUG00000012810) #19 CRBN (ENSVVUG00000012661) #20 LRRN1 (ENSVVUG00000012640) #21 ENSVVUG00000012624 ENSVVUG00000012619 #22 SUMF1 (ENSVVUG00000012610) #23 ENSVVUG00000011191 #24 ENSVVUG00000009857 #24 BHLHE40 (ENSVVUG00000009777) #26 ARL8B (ENSVVUG00000009760) #27 EDEM1 (ENSVVUG00000009660) #28 ENSVVUG00000009583 ##29 Felidae ANCESTRAL SPECIES 17 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00390000008694.b.b.d ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Panthera ANCESTRAL SPECIES 1 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00390000008694.b.b.d ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Tiger MODERN SPECIES 83 ENSPTIG00000011266 #22 SUMF1 (ENSPTIG00000011135) #23 ITPR1 (ENSPTIG00000010372) #24 BHLHE40 (ENSPTIG00000010250) #26 ARL8B (ENSPTIG00000010204) #27 EDEM1 (ENSPTIG00000010198) #28 ENSPTIG00000010162 Panthera_a ANCESTRAL SPECIES ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b lion MODERN SPECIES 2 RYBP (ENSPLOG00000002820) SHQ1 (ENSPLOG00000002849) #7 GXYLT2 (ENSPLOG00000002888) #9 PPP4R2 (ENSPLOG00000002914) PDZRN3 (ENSPLOG00000003033) #11 CNTN3 (ENSPLOG00000003083) #12 CHL1 (ENSPLOG00000003228) #13 ENSPLOG00000003473 CNTN6 (ENSPLOG00000003490) #16 ENSPLOG00000003587 CNTN4 (ENSPLOG00000003617) #17 IL5RA (ENSPLOG00000003728) #18 TRNT1 (ENSPLOG00000003771) #19 CRBN (ENSPLOG00000003808) #20 LRRN1 (ENSPLOG00000003838) #21 ENSPLOG00000003853 #22 SUMF1 (ENSPLOG00000003874) #23 ITPR1 (ENSPLOG00000003942) #24 BHLHE40 (ENSPLOG00000004020) #26 ARL8B (ENSPLOG00000004035) #27 EDEM1 (ENSPLOG00000004057) #28 GRM7 (ENSPLOG00000004096) #29 LMCD1 (ENSPLOG00000004127) #32 SSUH2 (ENSPLOG00000004153) #33 CAV3 (ENSPLOG00000004164) #34 OXTR (ENSPLOG00000004169) #35 RAD18 (ENSPLOG00000004183) #36 SRGAP3 (ENSPLOG00000004214) #37 THUMPD3 (ENSPLOG00000004248) SETD5 (ENSPLOG00000004271) MTMR14 (ENSPLOG00000004371) leopard MODERN SPECIES 119 CNTN6 (ENSPPRG00000002135) #16 CNTN4 (ENSPPRG00000002020) #17 IL5RA (ENSPPRG00000001745) #18 TRNT1 (ENSPPRG00000001327) #19 CRBN (ENSPPRG00000001273) #20 LRRN1 (ENSPPRG00000011605) #21 ENSPPRG00000001161 #22 SUMF1 (ENSPPRG00000001097) #23 ITPR1 (ENSPPRG00000000604) #24 BHLHE40 (ENSPPRG00000022800) #26 ARL8B (ENSPPRG00000022808) #27 EDEM1 (ENSPPRG00000022849) #28 ENSPPRG00000022876 ENSPPRG00000022899 Cat MODERN SPECIES 1 SHQ1 (ENSFCAG00000012781) #7 GXYLT2 (ENSFCAG00000011005) #9 PPP4R2 (ENSFCAG00000029481) PDZRN3 (ENSFCAG00000040417) #11 CNTN3 (ENSFCAG00000012778) #12 ENSFCAG00000005652 CHL1 (ENSFCAG00000011105) #13 ENSFCAG00000034166 CNTN6 (ENSFCAG00000015456) #16 ENSFCAG00000052641 CNTN4 (ENSFCAG00000000649) #17 IL5RA (ENSFCAG00000000652) #18 TRNT1 (ENSFCAG00000026805) #19 CRBN (ENSFCAG00000026512) #20 LRRN1 (ENSFCAG00000029530) #21 ENSFCAG00000037787 #22 SUMF1 (ENSFCAG00000011512) #23 ITPR1 (ENSFCAG00000002477) #24 BHLHE40 (ENSFCAG00000034238) #26 ARL8B (ENSFCAG00000000736) #27 EDEM1 (ENSFCAG00000000737) #28 ENSFCAG00000029757 GRM7 (ENSFCAG00000029003) #29 LMCD1 (ENSFCAG00000014723) #32 SSUH2 (ENSFCAG00000014724) #33 CAV3 (ENSFCAG00000035688) #34 OXTR (ENSFCAG00000014726) #35 RAD18 (ENSFCAG00000025747) #36 SRGAP3 (ENSFCAG00000008390) #37 THUMPD3 (ENSFCAG00000006171) SETD5 (ENSFCAG00000005610) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Chiroptera ANCESTRAL SPECIES 88 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 Microchiroptera ANCESTRAL SPECIES 16 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00530000063868.a ENSGT00940000162493 ENSGT00940000156030 ENSGT00940000157494 ENSGT00940000157262 ENSGT00390000007084.c.b ENSGT00940000155631 ENSGT00940000161296 ENSGT00940000159388 ENSGT00940000159711 Greater horseshoe bat MODERN SPECIES 8 PDZRN3 (ENSRFEG00010011914) #11 ENSRFEG00010011970 CNTN3 (ENSRFEG00010012552) #12 CHL1 (ENSRFEG00010012636) #13 CNTN6 (ENSRFEG00010012827) #16 CNTN4 (ENSRFEG00010012870) #17 IL5RA (ENSRFEG00010012950) #18 TRNT1 (ENSRFEG00010013326) #19 CRBN (ENSRFEG00010013551) #20 LRRN1 (ENSRFEG00010013770) #21 SUMF1 (ENSRFEG00010013803) #23 ENSRFEG00010014043 #22 ITPR1 (ENSRFEG00010014134) #24 BHLHE40 (ENSRFEG00010014606) #26 ARL8B (ENSRFEG00010014676) #27 EDEM1 (ENSRFEG00010014776) #28 TWF2 (ENSRFEG00010014959) TLR9 (ENSRFEG00010015047) ALAS1 (ENSRFEG00010015102) POC1A (ENSRFEG00010015173) DUSP7 (ENSRFEG00010015305) ENSRFEG00010015354 ACY1 (ENSRFEG00010015466) ABHD14A (ENSRFEG00010015875) ABHD14B (ENSRFEG00010015992) PCBP4 (ENSRFEG00010016071) ENSRFEG00010016188 Microbat MODERN SPECIES 1601 LRRN1 (ENSMLUG00000003543) #21 ENSMLUG00000027733 #22 SUMF1 (ENSMLUG00000015762) #23 ENSMLUG00000030685 ENSMLUG00000007717 ##24 Equus ANCESTRAL SPECIES 5 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT01090000263390 ENSGT00940000157446 Horse MODERN SPECIES 7 GPR27 (ENSECAG00000032664) RYBP (ENSECAG00000000266) SHQ1 (ENSECAG00000015673) #7 GXYLT2 (ENSECAG00000008483) #9 PPP4R2 (ENSECAG00000000689) PDZRN3 (ENSECAG00000014864) #11 CNTN3 (ENSECAG00000013575) #12 CHL1 (ENSECAG00000024808) #13 ENSECAG00000027842 CNTN6 (ENSECAG00000015975) #16 CNTN4 (ENSECAG00000009769) #17 IL5RA (ENSECAG00000022503) #18 TRNT1 (ENSECAG00000014420) #19 CRBN (ENSECAG00000015422) #20 LRRN1 (ENSECAG00000002874) #21 ENSECAG00000011514 #22 SUMF1 (ENSECAG00000020242) #23 ITPR1 (ENSECAG00000020933) #24 BHLHE40 (ENSECAG00000015069) #26 ARL8B (ENSECAG00000013084) #27 EDEM1 (ENSECAG00000023369) #28 ENSECAG00000056332 ENSECAG00000048581 GRM7 (ENSECAG00000016171) #29 LMCD1 (ENSECAG00000010791) #32 SSUH2 (ENSECAG00000039589) #33 CAV3 (ENSECAG00000020701) #34 OXTR (ENSECAG00000017844) #35 ENSECAG00000056983 RAD18 (ENSECAG00000010746) #36 SRGAP3 (ENSECAG00000010118) #37 Donkey MODERN SPECIES 13 PROK2 (ENSEASG00005033363) RYBP (ENSEASG00005029789) SHQ1 (ENSEASG00005002237) #7 GXYLT2 (ENSEASG00005002247) #9 PPP4R2 (ENSEASG00005002252) PDZRN3 (ENSEASG00005002263) #11 ENSEASG00005002280 #12 ENSEASG00005002560 #13 ENSEASG00005032406 CNTN6 (ENSEASG00005003549) #16 CNTN4 (ENSEASG00005003558) #17 IL5RA (ENSEASG00005003564) #18 TRNT1 (ENSEASG00005003577) #19 CRBN (ENSEASG00005003584) #20 LRRN1 (ENSEASG00005003592) #21 ENSEASG00005032131 #22 SUMF1 (ENSEASG00005003601) #23 ITPR1 (ENSEASG00005004852) #24 BHLHE40 (ENSEASG00005034761) #26 ARL8B (ENSEASG00005023967) #27 EDEM1 (ENSEASG00005013107) #28 ENSEASG00005031999 GRM7 (ENSEASG00005013291) #29 ENSEASG00005013295 LMCD1 (ENSEASG00005013302) #32 SSUH2 (ENSEASG00005013304) #33 CAV3 (ENSEASG00005033820) #34 OXTR (ENSEASG00005013312) #35 RAD18 (ENSEASG00005013316) #36 SRGAP3 (ENSEASG00005013321) #37 THUMPD3 (ENSEASG00005013327) Atlantogenata ANCESTRAL SPECIES 34 ENSGT00890000139436.A.a ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Afrotheria ANCESTRAL SPECIES 32 ENSGT00890000139436.A.a ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00890000139436.A.a ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Elephant MODERN SPECIES 49 RYBP (ENSLAFG00000003133) ENSLAFG00000017601 #7 GXYLT2 (ENSLAFG00000017357) #9 PPP4R2 (ENSLAFG00000000513) PDZRN3 (ENSLAFG00000014734) #11 ENSLAFG00000026536 ENSLAFG00000031602 CNTN3 (ENSLAFG00000008082) #12 CHL1 (ENSLAFG00000000179) #13 CNTN6 (ENSLAFG00000008927) #16 CNTN4 (ENSLAFG00000011631) #17 IL5RA (ENSLAFG00000011644) #18 TRNT1 (ENSLAFG00000023191) #19 CRBN (ENSLAFG00000017627) #20 LRRN1 (ENSLAFG00000010287) #21 ENSLAFG00000026765 #22 SUMF1 (ENSLAFG00000010276) #23 ITPR1 (ENSLAFG00000002957) #24 BHLHE40 (ENSLAFG00000004896) #26 ARL8B (ENSLAFG00000007764) #27 EDEM1 (ENSLAFG00000007772) #28 GRM7 (ENSLAFG00000002333) #29 LMCD1 (ENSLAFG00000015653) #32 SSUH2 (ENSLAFG00000010680) #33 CAV3 (ENSLAFG00000030253) #34 OXTR (ENSLAFG00000005307) #35 RAD18 (ENSLAFG00000004667) #36 SRGAP3 (ENSLAFG00000005453) #37 THUMPD3 (ENSLAFG00000005103) SETD5 (ENSLAFG00000008849) LHFPL4 (ENSLAFG00000008855) Xenarthra ANCESTRAL SPECIES 434 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 Armadillo MODERN SPECIES 4527 CNTN4 (ENSDNOG00000008784) #17 IL5RA (ENSDNOG00000008818) #18 TRNT1 (ENSDNOG00000008837) #19 CRBN (ENSDNOG00000008855) #20 LRRN1 (ENSDNOG00000013430) #21 ENSDNOG00000047048 ENSDNOG00000037330 #22 SUMF1 (ENSDNOG00000004539) #23 ITPR1 (ENSDNOG00000000458) #24 BHLHE40 (ENSDNOG00000035717) #26 ARL8B (ENSDNOG00000046163) #27 ENSDNOG00000043504 #28 ENSDNOG00000032647 #28 ENSDNOG00000043736 Marsupialia ANCESTRAL SPECIES 14 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Diprotodontia ANCESTRAL SPECIES 12 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00940000160159.b ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b Common wonbat MODERN SPECIES 1012 PPP4R2 (ENSVURG00010008448) ENSVURG00010008462 PDZRN3 (ENSVURG00010008505) #11 ENSVURG00010008548 CNTN3 (ENSVURG00010008586) #12 CHL1 (ENSVURG00010008642) #13 ENSVURG00010008727 CNTN6 (ENSVURG00010008756) #16 ENSVURG00010008843 ENSVURG00010008854 CNTN4 (ENSVURG00010008887) #17 IL5RA (ENSVURG00010008982) #18 TRNT1 (ENSVURG00010008997) #19 CRBN (ENSVURG00010009020) #20 LRRN1 (ENSVURG00010009042) #21 ENSVURG00010009062 #22 SUMF1 (ENSVURG00010009079) #23 ITPR1 (ENSVURG00010009114) #24 BHLHE40 (ENSVURG00010009249) #26 ARL8B (ENSVURG00010009259) #27 EDEM1 (ENSVURG00010009274) #28 ENSVURG00010009302 ENSVURG00010009325 #29 GRM7 (ENSVURG00010009382) #29 ENSVURG00010009435 ENSVURG00010009440 LMCD1 (ENSVURG00010009459) #32 SSUH2 (ENSVURG00010009470) #33 CAV3 (ENSVURG00010009478) #34 OXTR (ENSVURG00010009486) #35 RAD18 (ENSVURG00010009498) #36 koala MODERN SPECIES 180 ENSPCIG00000023089 #16 CNTN4 (ENSPCIG00000000132) #17 IL5RA (ENSPCIG00000030437) #18 TRNT1 (ENSPCIG00000030436) #19 CRBN (ENSPCIG00000030435) #20 ENSPCIG00000015780 LRRN1 (ENSPCIG00000015777) #21 ENSPCIG00000027892 #22 SUMF1 (ENSPCIG00000027894) #23 ITPR1 (ENSPCIG00000027965) #24 BHLHE40 (ENSPCIG00000035444) #26 ARL8B (ENSPCIG00000028258) #27 EDEM1 (ENSPCIG00000028260) #28 Tasmanian devil MODERN SPECIES GPR27 (ENSSHAG00000022511) ENSSHAG00000031144 ENSSHAG00000013359 SHQ1 (ENSSHAG00000015077) #7 GXYLT2 (ENSSHAG00000015594) #9 PPP4R2 (ENSSHAG00000015837) PDZRN3 (ENSSHAG00000016709) #11 ENSSHAG00000010121 #12 ENSSHAG00000010125 #13 CNTN6 (ENSSHAG00000015764) #16 CNTN4 (ENSSHAG00000018520) #17 IL5RA (ENSSHAG00000018837) #18 TRNT1 (ENSSHAG00000018861) #19 CRBN (ENSSHAG00000029768) #20 LRRN1 (ENSSHAG00000027597) #21 ENSSHAG00000030072 #22 SUMF1 (ENSSHAG00000022459) #23 ENSSHAG00000012663 #24 BHLHE40 (ENSSHAG00000023494) #26 ARL8B (ENSSHAG00000031008) #27 EDEM1 (ENSSHAG00000005432) #28 ENSSHAG00000026569 GRM7 (ENSSHAG00000024593) #29 LMCD1 (ENSSHAG00000008779) #32 SSUH2 (ENSSHAG00000010057) #33 CAV3 (ENSSHAG00000021107) #34 OXTR (ENSSHAG00000011374) #35 RAD18 (ENSSHAG00000012472) #36 SRGAP3 (ENSSHAG00000012943) #37 THUMPD3 (ENSSHAG00000014467) SETD5 (ENSSHAG00000014669) Opossum MODERN SPECIES 5 PPP4R2 (ENSMODG00000003940) PDZRN3 (ENSMODG00000003959) #11 CNTN3 (ENSMODG00000003991) #12 ENSMODG00000049888 ENSMODG00000046603 CHL1 (ENSMODG00000004153) #13 CNTN6 (ENSMODG00000004198) #16 ENSMODG00000051590 ENSMODG00000048583 ENSMODG00000028686 CNTN4 (ENSMODG00000004323) #17 ENSMODG00000004351 #18 TRNT1 (ENSMODG00000004368) #19 CRBN (ENSMODG00000004403) #20 LRRN1 (ENSMODG00000024416) #21 ENSMODG00000004437 #22 SUMF1 (ENSMODG00000045035) #23 ITPR1 (ENSMODG00000004495) #24 BHLHE40 (ENSMODG00000004516) #26 ARL8B (ENSMODG00000004530) #27 EDEM1 (ENSMODG00000004556) #28 ENSMODG00000042609 ENSMODG00000004592 #29 GRM7 (ENSMODG00000004605) #29 LMCD1 (ENSMODG00000004651) #32 SSUH2 (ENSMODG00000004659) #33 ENSMODG00000045708 #34 OXTR (ENSMODG00000004673) #35 RAD18 (ENSMODG00000004679) #36 SRGAP3 (ENSMODG00000004712) #37 THUMPD3 (ENSMODG00000004715) Platypus MODERN SPECIES 84 IARS1 (ENSOANG00000000112) ENSOANG00000015176 SLC6A11 (ENSOANG00000039168) SLC6A1 (ENSOANG00000015178) HRH1 (ENSOANG00000000983) ATG7 (ENSOANG00000002182) VGLL4 (ENSOANG00000014429) CNTN3 (ENSOANG00000021376) #12 CHL1 (ENSOANG00000003342) #13 CNTN6 (ENSOANG00000012175) #16 CNTN4 (ENSOANG00000011370) #17 IL5RA (ENSOANG00000015382) #18 TRNT1 (ENSOANG00000007514) #19 CRBN (ENSOANG00000007513) #20 LRRN1 (ENSOANG00000010239) #21 ENSOANG00000003769 #22 SUMF1 (ENSOANG00000019838) #23 ITPR1 (ENSOANG00000003765) #24 BHLHE40 (ENSOANG00000038785) #26 ARL8B (ENSOANG00000051209) #27 EDEM1 (ENSOANG00000003763) #28 ENSOANG00000012380 #29 ENSOANG00000002636 ENSOANG00000013668 #29 ENSOANG00000041232 LMCD1 (ENSOANG00000041669) #32 SSUH2 (ENSOANG00000011551) #33 CAV3 (ENSOANG00000044650) #34 OXTR (ENSOANG00000007720) #35 ENSOANG00000046474 SRGAP3 (ENSOANG00000014483) #37 Sauria ANCESTRAL SPECIES 13 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00390000003937 ENSGT00940000155311.C ENSGT00940000160765 ENSGT00940000155445 Lepidosauria ANCESTRAL SPECIES 14 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 Episquamata ANCESTRAL SPECIES 4 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000155865 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT01030000235965 ENSGT00950000182824.a.b.a #37 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000155865 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a.s #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E.m.a #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.k ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT01030000235965 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a Elapidae_a ANCESTRAL SPECIES 8 ENSGT00940000155865 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a.s #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E.m.a #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.k ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a.c #37 ENSGT00530000063557.a ENSGT00390000014353 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00940000155865 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a.s #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E.m.a #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.k ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a.c #37 ENSGT00530000063557.a ENSGT00390000014353 Mainland tiger snake MODERN SPECIES 2 RYBP (ENSNSUG00000007004) ENSNSUG00000006999 #7 ENSNSUG00000006998 #7 GXYLT2 (ENSNSUG00000006994) #9 ENSNSUG00000006992 #10 PDZRN3 (ENSNSUG00000006989) #11 ENSNSUG00000006988 CNTN3 (ENSNSUG00000006618) #12 ENSNSUG00000006605 CHL1 (ENSNSUG00000006603) #13 CNTN6 (ENSNSUG00000006539) #16 CNTN4 (ENSNSUG00000006531) #17 TRNT1 (ENSNSUG00000006530) #19 CRBN (ENSNSUG00000006528) #20 LRRN1 (ENSNSUG00000006527) #21 ENSNSUG00000006524 #22 SUMF1 (ENSNSUG00000006522) #23 ENSNSUG00000006519 ITPR1 (ENSNSUG00000006516) #24 BHLHE40 (ENSNSUG00000006512) #26 ARL8B (ENSNSUG00000006508) #27 EDEM1 (ENSNSUG00000006360) #28 ENSNSUG00000006357 #29 GRM7 (ENSNSUG00000006356) #29 LMCD1 (ENSNSUG00000006355) #32 SSUH2 (ENSNSUG00000006353) #33 ENSNSUG00000006350 OXTR (ENSNSUG00000006347) #35 ENSNSUG00000006346 SRGAP3 (ENSNSUG00000006301) #37 THUMPD3 (ENSNSUG00000006295) Eastern brown snake MODERN SPECIES 3 EIF4E3 (ENSPTXG00000004035) GPR27 (ENSPTXG00000004036) PROK2 (ENSPTXG00000004037) RYBP (ENSPTXG00000004041) SHQ1 (ENSPTXG00000000044) #7 GXYLT2 (ENSPTXG00000000072) #9 ENSPTXG00000000107 #10 PDZRN3 (ENSPTXG00000000135) #11 CNTN3 (ENSPTXG00000000180) #12 CHL1 (ENSPTXG00000000274) #13 ENSPTXG00000000362 #16 CNTN4 (ENSPTXG00000000390) #17 TRNT1 (ENSPTXG00000000410) #19 CRBN (ENSPTXG00000000440) #20 LRRN1 (ENSPTXG00000000450) #21 ENSPTXG00000000457 #22 SUMF1 (ENSPTXG00000000467) #23 ITPR1 (ENSPTXG00000000808) #24 ENSPTXG00000002883 BHLHE40 (ENSPTXG00000002885) #26 ARL8B (ENSPTXG00000002887) #27 EDEM1 (ENSPTXG00000002889) #28 GRM7 (ENSPTXG00000002895) #29 LMCD1 (ENSPTXG00000002903) #32 SSUH2 (ENSPTXG00000002904) #33 ENSPTXG00000002905 OXTR (ENSPTXG00000002906) #35 RAD18 (ENSPTXG00000002908) #36 SRGAP3 (ENSPTXG00000002911) #37 THUMPD3 (ENSPTXG00000002916) ENSPTXG00000002920 Blue-lipped sea krait MODERN SPECIES 6002 ENSLLTG00000014091 #22 SUMF1 (ENSLLTG00000014088) #23 Indian cobra MODERN SPECIES 1 PROK2 (ENSNNAG00000001687) RYBP (ENSNNAG00000001699) ENSNNAG00000001713 #7 ENSNNAG00000001725 #7 GXYLT2 (ENSNNAG00000001742) #9 ENSNNAG00000001768 #10 PDZRN3 (ENSNNAG00000001782) #11 ENSNNAG00000001814 CNTN3 (ENSNNAG00000001838) #12 CHL1 (ENSNNAG00000001897) #13 CNTN6 (ENSNNAG00000002047) #16 CNTN4 (ENSNNAG00000002367) #17 TRNT1 (ENSNNAG00000002400) #19 ENSNNAG00000002424 #20 LRRN1 (ENSNNAG00000002516) #21 ENSNNAG00000002521 #22 SUMF1 (ENSNNAG00000002532) #23 ENSNNAG00000004054 #24 BHLHE40 (ENSNNAG00000018438) #26 ARL8B (ENSNNAG00000018443) #27 EDEM1 (ENSNNAG00000018450) #28 ENSNNAG00000018468 #29 GRM7 (ENSNNAG00000018473) #29 LMCD1 (ENSNNAG00000018484) #32 SSUH2 (ENSNNAG00000018487) #33 ENSNNAG00000018494 OXTR (ENSNNAG00000018500) #35 ENSNNAG00000018503 SRGAP3 (ENSNNAG00000018519) #37 THUMPD3 (ENSNNAG00000018537) ENSNNAG00000018544 Lizard MODERN SPECIES 1 PDZRN3 (ENSACAG00000014911) #11 ENSACAG00000043635 CNTN3 (ENSACAG00000014961) #12 CHL1 (ENSACAG00000001405) #13 ENSACAG00000041579 ENSACAG00000040802 CNTN6 (ENSACAG00000010425) #16 ENSACAG00000036977 ENSACAG00000005659 #17 ENSACAG00000037414 ENSACAG00000036932 TRNT1 (ENSACAG00000005657) #19 CRBN (ENSACAG00000005582) #20 ENSACAG00000045387 LRRN1 (ENSACAG00000026715) #21 ENSACAG00000045524 #22 SUMF1 (ENSACAG00000010294) #23 ENSACAG00000035619 ITPR1 (ENSACAG00000009987) #24 ENSACAG00000037777 BHLHE40 (ENSACAG00000012577) #26 ARL8B (ENSACAG00000045374) #27 EDEM1 (ENSACAG00000012377) #28 ENSACAG00000029600 ENSACAG00000040711 ENSACAG00000043925 #29 ENSACAG00000045588 ENSACAG00000034877 ENSACAG00000009849 #29 trh (ENSACAG00000043370) ENSACAG00000012305 Laterata ANCESTRAL SPECIES 1 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 Common wall lizard MODERN SPECIES 10 PDZRN3 (ENSPMRG00000015257) #11 ENSPMRG00000015251 CNTN3 (ENSPMRG00000014964) #12 ENSPMRG00000014911 ENSPMRG00000014875 CHL1 (ENSPMRG00000014819) #13 ENSPMRG00000014808 CNTN6 (ENSPMRG00000014662) #16 CNTN4 (ENSPMRG00000014619) #17 ENSPMRG00000014615 TRNT1 (ENSPMRG00000014610) #19 CRBN (ENSPMRG00000014605) #20 LRRN1 (ENSPMRG00000014601) #21 ENSPMRG00000014598 ENSPMRG00000014589 ENSPMRG00000014584 #22 SUMF1 (ENSPMRG00000014573) #23 ITPR1 (ENSPMRG00000006931) #24 BHLHE40 (ENSPMRG00000005541) #26 ARL8B (ENSPMRG00000005530) #27 EDEM1 (ENSPMRG00000005413) #28 ENSPMRG00000005385 ENSPMRG00000005378 ENSPMRG00000005371 #29 ENSPMRG00000005362 #29 ENSPMRG00000005354 LMCD1 (ENSPMRG00000005344) #32 SSUH2 (ENSPMRG00000005332) #33 ENSPMRG00000005319 OXTR (ENSPMRG00000005313) #35 RAD18 (ENSPMRG00000005296) #36 Argentine black and white tegu MODERN SPECIES 30 PDZRN3 (ENSSMRG00000003119) #11 ENSSMRG00000003187 CNTN3 (ENSSMRG00000003298) #12 ENSSMRG00000010160 ENSSMRG00000010165 ENSSMRG00000010173 ENSSMRG00000010180 CHL1 (ENSSMRG00000010197) #13 CNTN6 (ENSSMRG00000013978) #16 ENSSMRG00000017841 CNTN4 (ENSSMRG00000017856) #17 ENSSMRG00000017860 TRNT1 (ENSSMRG00000017861) #19 CRBN (ENSSMRG00000017863) #20 LRRN1 (ENSSMRG00000017865) #21 ENSSMRG00000017868 #22 SUMF1 (ENSSMRG00000017869) #23 ITPR1 (ENSSMRG00000017870) #24 BHLHE40 (ENSSMRG00000017876) #26 ARL8B (ENSSMRG00000017877) #27 EDEM1 (ENSSMRG00000017878) #28 ENSSMRG00000017879 ENSSMRG00000017881 tuatara MODERN SPECIES 1077 ENSSPUG00000002766 #22 SUMF1 (ENSSPUG00000002756) #23 ITPR1 (ENSSPUG00000002645) #24 BHLHE40 (ENSSPUG00000002630) #26 ARL8B (ENSSPUG00000002625) #27 EDEM1 (ENSSPUG00000002609) #28 Archelosauria ANCESTRAL SPECIES 17 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 Archosauria ANCESTRAL SPECIES 24 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT01030000237821 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 Aves ANCESTRAL SPECIES 29 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 Neognathae ANCESTRAL SPECIES 27 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 Galloanserae ANCESTRAL SPECIES 26 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 Anatidae ANCESTRAL SPECIES 41 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 Pink-footed goose MODERN SPECIES 49 GPR27 (ENSABRG00000016783) PROK2 (ENSABRG00000016781) RYBP (ENSABRG00000016768) SHQ1 (ENSABRG00000016761) #7 GXYLT2 (ENSABRG00000016756) #9 PPP4R2 (ENSABRG00000016753) PDZRN3 (ENSABRG00000016746) #11 CNTN3 (ENSABRG00000016737) #12 CHL1 (ENSABRG00000016703) #13 CNTN6 (ENSABRG00000015653) #16 CNTN4 (ENSABRG00000014569) #17 IL5RA (ENSABRG00000014471) #18 TRNT1 (ENSABRG00000014416) #19 CRBN (ENSABRG00000014371) #20 LRRN1 (ENSABRG00000014369) #21 ENSABRG00000014367 #22 SUMF1 (ENSABRG00000014365) #23 ITPR1 (ENSABRG00000010195) #24 BHLHE40 (ENSABRG00000009713) #26 ARL8B (ENSABRG00000009711) #27 EDEM1 (ENSABRG00000009573) #28 GRM7 (ENSABRG00000009502) #29 LMCD1 (ENSABRG00000009469) #32 SSUH2 (ENSABRG00000009453) #33 CAV3 (ENSABRG00000009447) #34 OXTR (ENSABRG00000009437) #35 RAD18 (ENSABRG00000009421) #36 SRGAP3 (ENSABRG00000009392) #37 THUMPD3 (ENSABRG00000009373) ENSABRG00000009365 IRAK2 (ENSABRG00000009344) Duck MODERN SPECIES 4 GPR27 (ENSAPLG00000011697) PROK2 (ENSAPLG00000011432) RYBP (ENSAPLG00000013882) SHQ1 (ENSAPLG00000013926) #7 GXYLT2 (ENSAPLG00000013945) #9 PPP4R2 (ENSAPLG00000014045) PDZRN3 (ENSAPLG00000014073) #11 CNTN3 (ENSAPLG00000009693) #12 CHL1 (ENSAPLG00000007000) #13 CNTN6 (ENSAPLG00000005639) #16 CNTN4 (ENSAPLG00000004320) #17 IL5RA (ENSAPLG00000004282) #18 TRNT1 (ENSAPLG00000004258) #19 CRBN (ENSAPLG00000003897) #20 LRRN1 (ENSAPLG00000001694) #21 ENSAPLG00000001691 #22 SUMF1 (ENSAPLG00000003538) #23 ITPR1 (ENSAPLG00000016350) #24 BHLHE40 (ENSAPLG00000016313) #26 ARL8B (ENSAPLG00000016295) #27 EDEM1 (ENSAPLG00000027743) #28 GRM7 (ENSAPLG00000002555) #29 LMCD1 (ENSAPLG00000002970) #32 SSUH2 (ENSAPLG00000003015) #33 CAV3 (ENSAPLG00000003098) #34 OXTR (ENSAPLG00000003100) #35 RAD18 (ENSAPLG00000003138) #36 SRGAP3 (ENSAPLG00000003289) #37 THUMPD3 (ENSAPLG00000003598) ENSAPLG00000003676 IRAK2 (ENSAPLG00000003679) Phasianidae ANCESTRAL SPECIES 16 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a.e #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00390000004064 Phasianidae_b ANCESTRAL SPECIES 16 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a.e #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00390000004064 Chicken MODERN SPECIES 3 PROK2 (ENSGALG00010019225) RYBP (ENSGALG00010018991) SHQ1 (ENSGALG00010020307) #7 GXYLT2 (ENSGALG00010020309) #9 PPP4R2 (ENSGALG00010020329) PDZRN3 (ENSGALG00010020350) #11 ENSGALG00010020359 CNTN3 (ENSGALG00010020369) #12 CHL1 (ENSGALG00010020396) #13 CNTN6 (ENSGALG00010020425) #16 CNTN4 (ENSGALG00010020436) #17 IL5RA (ENSGALG00010020457) #18 TRNT1 (ENSGALG00010020484) #19 CRBN (ENSGALG00010020509) #20 LRRN1 (ENSGALG00010020562) #21 ENSGALG00010020580 #22 SUMF1 (ENSGALG00010020596) #23 ITPR1 (ENSGALG00010021688) #24 BHLHE40 (ENSGALG00010021719) #26 ARL8B (ENSGALG00010021730) #27 EDEM1 (ENSGALG00010021736) #28 GRM7 (ENSGALG00010019426) #29 LMCD1 (ENSGALG00010019441) #32 CAV3 (ENSGALG00010019451) #34 OXTR (ENSGALG00010019473) #35 RAD18 (ENSGALG00010019584) #36 SRGAP3 (ENSGALG00010019624) #37 THUMPD3 (ENSGALG00010018999) ENSGALG00010019006 IRAK2 (ENSGALG00010019017) GHRL (ENSGALG00010019047) Turkey MODERN SPECIES 5 SHQ1 (ENSMGAG00000009640) #7 PPP4R2 (ENSMGAG00000009674) GXYLT2 (ENSMGAG00000009655) #9 ENSMGAG00000018290 PDZRN3 (ENSMGAG00000009691) #11 ENSMGAG00000017393 ENSMGAG00000021720 ENSMGAG00000009709 #12 CHL1 (ENSMGAG00000009762) #13 CNTN6 (ENSMGAG00000009812) #16 CNTN4 (ENSMGAG00000009910) #17 IL5RA (ENSMGAG00000009996) #18 CRBN (ENSMGAG00000010013) #20 TRNT1 (ENSMGAG00000009971) #19 LRRN1 (ENSMGAG00000009988) #21 ENSMGAG00000018225 #22 SUMF1 (ENSMGAG00000010033) #23 ITPR1 (ENSMGAG00000010046) #24 BHLHE40 (ENSMGAG00000018338) #26 ARL8B (ENSMGAG00000017811) #27 EDEM1 (ENSMGAG00000010070) #28 GRM7 (ENSMGAG00000010102) #29 ENSMGAG00000018916 #37 ENSMGAG00000019285 #37 ENSMGAG00000010131 #36 OXTR (ENSMGAG00000010127) #35 ENSMGAG00000010109 #32 ENSMGAG00000010119 #34 ENSMGAG00000010182 IRAK2 (ENSMGAG00000010194) ENSMGAG00000010214 Japanese quail MODERN SPECIES 3 RYBP (ENSCJPG00005018659) SHQ1 (ENSCJPG00005018660) #7 GXYLT2 (ENSCJPG00005018661) #9 ENSCJPG00005018662 #10 PDZRN3 (ENSCJPG00005018664) #11 CNTN3 (ENSCJPG00005018668) #12 CHL1 (ENSCJPG00005018669) #13 ENSCJPG00005018674 ENSCJPG00005018675 CNTN6 (ENSCJPG00005018676) #16 CNTN4 (ENSCJPG00005018679) #17 IL5RA (ENSCJPG00005018680) #18 TRNT1 (ENSCJPG00005018681) #19 CRBN (ENSCJPG00005018682) #20 LRRN1 (ENSCJPG00005018683) #21 ENSCJPG00005018684 #22 SUMF1 (ENSCJPG00005018685) #23 ITPR1 (ENSCJPG00005018726) #24 ENSCJPG00005020532 BHLHE40 (ENSCJPG00005020534) #26 ARL8B (ENSCJPG00005020535) #27 EDEM1 (ENSCJPG00005020536) #28 ENSCJPG00005020539 #29 ENSCJPG00005020540 #29 LMCD1 (ENSCJPG00005020541) #32 CAV3 (ENSCJPG00005020542) #34 OXTR (ENSCJPG00005020543) #35 RAD18 (ENSCJPG00005020544) #36 SRGAP3 (ENSCJPG00005020553) #37 THUMPD3 (ENSCJPG00005020742) ENSCJPG00005020743 Neognathae_b ANCESTRAL SPECIES 18 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 Passeriformes ANCESTRAL SPECIES 16 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B Great tit MODERN SPECIES 3 GPR27 (ENSPMJG00000005597) PROK2 (ENSPMJG00000005599) RYBP (ENSPMJG00000005603) SHQ1 (ENSPMJG00000005611) #7 GXYLT2 (ENSPMJG00000005617) #9 ENSPMJG00000005654 #10 PDZRN3 (ENSPMJG00000005657) #11 ENSPMJG00000005665 CNTN3 (ENSPMJG00000005671) #12 CHL1 (ENSPMJG00000005688) #13 CNTN6 (ENSPMJG00000005736) #16 CNTN4 (ENSPMJG00000005757) #17 IL5RA (ENSPMJG00000005764) #18 TRNT1 (ENSPMJG00000005765) #19 CRBN (ENSPMJG00000005773) #20 ENSPMJG00000005792 #22 SUMF1 (ENSPMJG00000005794) #23 ITPR1 (ENSPMJG00000005801) #24 BHLHE40 (ENSPMJG00000005858) #26 ARL8B (ENSPMJG00000005862) #27 EDEM1 (ENSPMJG00000005863) #28 GRM7 (ENSPMJG00000005895) #29 LMCD1 (ENSPMJG00000005956) #32 CAV3 (ENSPMJG00000005958) #34 OXTR (ENSPMJG00000005959) #35 RAD18 (ENSPMJG00000005960) #36 ENSPMJG00000005966 SRGAP3 (ENSPMJG00000005970) #37 THUMPD3 (ENSPMJG00000005977) ENSPMJG00000005978 IRAK2 (ENSPMJG00000005988) Passeriformes_d ANCESTRAL SPECIES 16 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B Flycatcher MODERN SPECIES 3 RYBP (ENSFALG00000027888) SHQ1 (ENSFALG00000013428) #7 GXYLT2 (ENSFALG00000024120) #9 PPP4R2 (ENSFALG00000013436) PDZRN3 (ENSFALG00000013445) #11 ENSFALG00000027072 CNTN3 (ENSFALG00000013457) #12 CHL1 (ENSFALG00000013463) #13 CNTN6 (ENSFALG00000013472) #16 CNTN4 (ENSFALG00000013504) #17 ENSFALG00000025220 IL5RA (ENSFALG00000013534) #18 TRNT1 (ENSFALG00000013539) #19 CRBN (ENSFALG00000013540) #20 LRRN1 (ENSFALG00000014525) #21 ENSFALG00000023036 #22 SUMF1 (ENSFALG00000013555) #23 ITPR1 (ENSFALG00000013566) #24 ENSFALG00000023539 ENSFALG00000027473 #26 ARL8B (ENSFALG00000013578) #27 EDEM1 (ENSFALG00000013588) #28 ENSFALG00000024020 GRM7 (ENSFALG00000013602) #29 ENSFALG00000025075 LMCD1 (ENSFALG00000013612) #32 CAV3 (ENSFALG00000024966) #34 OXTR (ENSFALG00000013622) #35 RAD18 (ENSFALG00000013625) #36 SRGAP3 (ENSFALG00000013628) #37 ENSFALG00000023660 Passeriformes_g ANCESTRAL SPECIES 16 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C.l #17 ENSGT00940000155198.C.k #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B Passeroidea ANCESTRAL SPECIES 16 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C.l #17 ENSGT00940000155198.C.k #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000153393.B Zebra finch MODERN SPECIES 3 EIF4E3 (ENSTGUG00000009923) GPR27 (ENSTGUG00000009928) PROK2 (ENSTGUG00000026872) RYBP (ENSTGUG00000020831) SHQ1 (ENSTGUG00000009933) #7 ENSTGUG00000009943 #10 PDZRN3 (ENSTGUG00000014523) #11 CNTN3 (ENSTGUG00000009960) #12 CHL1 (ENSTGUG00000009997) #13 CNTN6 (ENSTGUG00000010053) #16 CNTN4 (ENSTGUG00000010102) #17 IL5RA (ENSTGUG00000010171) #18 TRNT1 (ENSTGUG00000010192) #19 CRBN (ENSTGUG00000010200) #20 LRRN1 (ENSTGUG00000010215) #21 ENSTGUG00000019447 #22 SUMF1 (ENSTGUG00000010221) #23 ITPR1 (ENSTGUG00000010241) #24 BHLHE40 (ENSTGUG00000010301) #26 ARL8B (ENSTGUG00000022959) #27 EDEM1 (ENSTGUG00000010316) #28 GRM7 (ENSTGUG00000010358) #29 LMCD1 (ENSTGUG00000010388) #32 CAV3 (ENSTGUG00000010401) #34 OXTR (ENSTGUG00000020441) #35 RAD18 (ENSTGUG00000010405) #36 SRGAP3 (ENSTGUG00000010415) #37 THUMPD3 (ENSTGUG00000010440) ENSTGUG00000024732 IRAK2 (ENSTGUG00000010449) SEC13 (ENSTGUG00000010453) Common canary MODERN SPECIES 70 LRRN1 (ENSSCAG00000016036) #21 ENSSCAG00000016034 #22 SUMF1 (ENSSCAG00000016032) #23 ENSSCAG00000016024 ITPR1 (ENSSCAG00000013652) #24 BHLHE40 (ENSSCAG00000012457) #26 ARL8B (ENSSCAG00000012450) #27 EDEM1 (ENSSCAG00000012366) #28 CNTN6 (ENSSCAG00000012325) #16 ENSSCAG00000012309 #17 ENSSCAG00000012298 #17 IL5RA (ENSSCAG00000012281) #18 TRNT1 (ENSSCAG00000012278) #19 CRBN (ENSSCAG00000012252) #20 Medium ground finch MODERN SPECIES 123 CNTN6 (ENSGFOG00000006749) #16 CNTN4 (ENSGFOG00000007641) #17 IL5RA (ENSGFOG00000007674) #18 TRNT1 (ENSGFOG00000007738) #19 CRBN (ENSGFOG00000007741) #20 LRRN1 (ENSGFOG00000007754) #21 ENSGFOG00000007761 #22 SUMF1 (ENSGFOG00000007775) #23 ITPR1 (ENSGFOG00000007908) #24 BHLHE40 (ENSGFOG00000008912) #26 ARL8B (ENSGFOG00000008921) #27 EDEM1 (ENSGFOG00000008936) #28 GRM7 (ENSGFOG00000008966) #29 LMCD1 (ENSGFOG00000008974) #32 ENSGFOG00000008981 CAV3 (ENSGFOG00000008983) #34 OXTR (ENSGFOG00000008986) #35 RAD18 (ENSGFOG00000008990) #36 SRGAP3 (ENSGFOG00000009033) #37 THUMPD3 (ENSGFOG00000009508) ENSGFOG00000009517 IRAK2 (ENSGFOG00000009530) Neognathae_c ANCESTRAL SPECIES 21 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 Kakapo MODERN SPECIES 3 PROK2 (ENSSHBG00005010813) RYBP (ENSSHBG00005010792) SHQ1 (ENSSHBG00005010752) #7 GXYLT2 (ENSSHBG00005010727) #9 ENSSHBG00005010670 #10 PDZRN3 (ENSSHBG00005010639) #11 ENSSHBG00005010579 CNTN3 (ENSSHBG00005000965) #12 CHL1 (ENSSHBG00005021241) #13 CNTN6 (ENSSHBG00005021239) #16 CNTN4 (ENSSHBG00005021238) #17 IL5RA (ENSSHBG00005021237) #18 TRNT1 (ENSSHBG00005021236) #19 CRBN (ENSSHBG00005021235) #20 LRRN1 (ENSSHBG00005021234) #21 ENSSHBG00005021232 #22 SUMF1 (ENSSHBG00005021231) #23 ITPR1 (ENSSHBG00005021182) #24 BHLHE40 (ENSSHBG00005021165) #26 ARL8B (ENSSHBG00005021164) #27 EDEM1 (ENSSHBG00005021161) #28 GRM7 (ENSSHBG00005021159) #29 LMCD1 (ENSSHBG00005021158) #32 SSUH2 (ENSSHBG00005021156) #33 CAV3 (ENSSHBG00005021155) #34 OXTR (ENSSHBG00005021154) #35 RAD18 (ENSSHBG00005021151) #36 SRGAP3 (ENSSHBG00005021150) #37 THUMPD3 (ENSSHBG00005021147) ENSSHBG00005021145 IRAK2 (ENSSHBG00005021143) Golden eagle MODERN SPECIES 12 RYBP (ENSACCG00020008553) SHQ1 (ENSACCG00020008571) #7 GXYLT2 (ENSACCG00020008596) #9 PPP4R2 (ENSACCG00020008614) PDZRN3 (ENSACCG00020008644) #11 CNTN3 (ENSACCG00020008678) #12 CHL1 (ENSACCG00020009287) #13 CNTN6 (ENSACCG00020009592) #16 CNTN4 (ENSACCG00020009634) #17 ENSACCG00020009645 IL5RA (ENSACCG00020009685) #18 TRNT1 (ENSACCG00020009728) #19 CRBN (ENSACCG00020009742) #20 ENSACCG00020009755 LRRN1 (ENSACCG00020009768) #21 ENSACCG00020009779 #22 SUMF1 (ENSACCG00020009793) #23 ITPR1 (ENSACCG00020009868) #24 BHLHE40 (ENSACCG00020009955) #26 ARL8B (ENSACCG00020009966) #27 EDEM1 (ENSACCG00020009983) #28 GRM7 (ENSACCG00020010003) #29 LMCD1 (ENSACCG00020010014) #32 SSUH2 (ENSACCG00020010024) #33 CAV3 (ENSACCG00020010035) #34 OXTR (ENSACCG00020010045) #35 RAD18 (ENSACCG00020010080) #36 SRGAP3 (ENSACCG00020010374) #37 THUMPD3 (ENSACCG00020010551) ENSACCG00020010562 IRAK2 (ENSACCG00020010579) African ostrich MODERN SPECIES 1076 RYBP (ENSSCUG00000015421) SHQ1 (ENSSCUG00000015411) #7 GXYLT2 (ENSSCUG00000015407) #9 PPP4R2 (ENSSCUG00000015403) PDZRN3 (ENSSCUG00000015402) #11 ENSSCUG00000015400 CNTN3 (ENSSCUG00000015390) #12 CHL1 (ENSSCUG00000015369) #13 CNTN6 (ENSSCUG00000015354) #16 ENSSCUG00000015349 CNTN4 (ENSSCUG00000015339) #17 IL5RA (ENSSCUG00000015330) #18 TRNT1 (ENSSCUG00000015323) #19 CRBN (ENSSCUG00000015318) #20 LRRN1 (ENSSCUG00000015306) #21 ENSSCUG00000015304 #22 SUMF1 (ENSSCUG00000015300) #23 ENSSCUG00000015218 #24 Australian saltwater crocodile MODERN SPECIES 37 ENSCPRG00005015737 #7 GXYLT2 (ENSCPRG00005015736) #9 PPP4R2 (ENSCPRG00005015732) PDZRN3 (ENSCPRG00005015721) #11 CNTN3 (ENSCPRG00005015706) #12 ENSCPRG00005015700 CHL1 (ENSCPRG00005015694) #13 CNTN6 (ENSCPRG00005015511) #16 ENSCPRG00005015470 ENSCPRG00005015468 CNTN4 (ENSCPRG00005015455) #17 IL5RA (ENSCPRG00005015437) #18 TRNT1 (ENSCPRG00005015429) #19 CRBN (ENSCPRG00005015422) #20 LRRN1 (ENSCPRG00005015420) #21 ENSCPRG00005015416 #22 SUMF1 (ENSCPRG00005015401) #23 ENSCPRG00005015393 ITPR1 (ENSCPRG00005013420) #24 BHLHE40 (ENSCPRG00005013082) #26 ARL8B (ENSCPRG00005013015) #27 EDEM1 (ENSCPRG00005012826) #28 ENSCPRG00005012786 ##29 GRM7 (ENSCPRG00005012779) #29 ENSCPRG00005012767 LMCD1 (ENSCPRG00005012738) #32 ENSCPRG00005012724 ENSCPRG00005012717 CAV3 (ENSCPRG00005012711) #34 OXTR (ENSCPRG00005012696) #35 RAD18 (ENSCPRG00005012686) #36 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT01030000238841 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 Emydidae ANCESTRAL SPECIES 13 ENSGT00890000139436.A.a ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT01030000238841 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 Three-toed box turtle MODERN SPECIES 33 RYBP (ENSTMTG00000017980) SHQ1 (ENSTMTG00000017994) #7 GXYLT2 (ENSTMTG00000018007) #9 PPP4R2 (ENSTMTG00000018024) PDZRN3 (ENSTMTG00000018055) #11 CNTN3 (ENSTMTG00000018117) #12 CHL1 (ENSTMTG00000018260) #13 ENSTMTG00000018456 CNTN6 (ENSTMTG00000018470) #16 CNTN4 (ENSTMTG00000018539) #17 IL5RA (ENSTMTG00000018639) #18 TRNT1 (ENSTMTG00000018738) #19 CRBN (ENSTMTG00000018758) #20 LRRN1 (ENSTMTG00000018782) #21 SUMF1 (ENSTMTG00000018795) #23 ENSTMTG00000018826 #22 ITPR1 (ENSTMTG00000018838) #24 ENSTMTG00000018932 BHLHE40 (ENSTMTG00000018947) #26 ARL8B (ENSTMTG00000018960) #27 EDEM1 (ENSTMTG00000018977) #28 GRM7 (ENSTMTG00000019012) #29 LMCD1 (ENSTMTG00000019124) #32 SSUH2 (ENSTMTG00000019142) #33 ENSTMTG00000019174 ENSTMTG00000019192 CAV3 (ENSTMTG00000019214) #34 OXTR (ENSTMTG00000019224) #35 RAD18 (ENSTMTG00000019261) #36 SRGAP3 (ENSTMTG00000019297) #37 THUMPD3 (ENSTMTG00000019533) painted turtle MODERN SPECIES 699 CNTN6 (ENSCPBG00000017663) #16 CNTN4 (ENSCPBG00000017643) #17 IL5RA (ENSCPBG00000017639) #18 TRNT1 (ENSCPBG00000017636) #19 CRBN (ENSCPBG00000017633) #20 LRRN1 (ENSCPBG00000017631) #21 ENSCPBG00000017630 #22 SUMF1 (ENSCPBG00000017623) #23 ITPR1 (ENSCPBG00000015066) #24 BHLHE40 (ENSCPBG00000014940) #26 ARL8B (ENSCPBG00000014937) #27 EDEM1 (ENSCPBG00000014836) #28 GRM7 (ENSCPBG00000014825) #29 ENSCPBG00000014823 LMCD1 (ENSCPBG00000014818) #32 SSUH2 (ENSCPBG00000014808) #33 ENSCPBG00000014803 ENSCPBG00000014800 CAV3 (ENSCPBG00000014797) #34 OXTR (ENSCPBG00000014795) #35 RAD18 (ENSCPBG00000014787) #36 SRGAP3 (ENSCPBG00000014775) #37 Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000160975 ENSGT00950000183062.a.a.a #11 ENSGT00530000063647.A.a.d ENSGT00940000160282 #12 ENSGT00940000160080 #13 ENSGT00940000160606 #16 ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT01030000238841 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00440000038003 #33 ENSGT00940000163873.l ENSGT00940000163873.k ENSGT00950000183006.B.f.b.b #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 Abingdon island giant tortoise MODERN SPECIES 1018 CNTN4 (ENSCABG00000017322) #17 IL5RA (ENSCABG00000017331) #18 TRNT1 (ENSCABG00000017350) #19 CRBN (ENSCABG00000017369) #20 LRRN1 (ENSCABG00000017472) #21 ENSCABG00000017474 #22 SUMF1 (ENSCABG00000017480) #23 ITPR1 (ENSCABG00000017505) #24 ENSCABG00000017520 BHLHE40 (ENSCABG00000017522) #26 ARL8B (ENSCABG00000017525) #27 EDEM1 (ENSCABG00000017541) #28 GRM7 (ENSCABG00000017790) #29 LMCD1 (ENSCABG00000017807) #32 SSUH2 (ENSCABG00000017809) #33 CAV3 (ENSCABG00000017812) #34 OXTR (ENSCABG00000017814) #35 RAD18 (ENSCABG00000017818) #36 SRGAP3 (ENSCABG00000000091) #37 THUMPD3 (ENSCABG00000000193) ENSCABG00000000206 Goode s thornscrub tortoise MODERN SPECIES 21 SHQ1 (ENSGEVG00005018751) #7 GXYLT2 (ENSGEVG00005018737) #9 PPP4R2 (ENSGEVG00005018720) PDZRN3 (ENSGEVG00005018672) #11 ENSGEVG00005018629 CNTN3 (ENSGEVG00005018336) #12 CHL1 (ENSGEVG00005018075) #13 CNTN6 (ENSGEVG00005017681) #16 ENSGEVG00005017608 CNTN4 (ENSGEVG00005017523) #17 IL5RA (ENSGEVG00005017497) #18 ENSGEVG00005017472 TRNT1 (ENSGEVG00005017461) #19 CRBN (ENSGEVG00005017441) #20 LRRN1 (ENSGEVG00005017431) #21 ENSGEVG00005017420 #22 SUMF1 (ENSGEVG00005017395) #23 ENSGEVG00005017380 #24 ENSGEVG00005011014 #24 BHLHE40 (ENSGEVG00005010114) #26 ARL8B (ENSGEVG00005010089) #27 EDEM1 (ENSGEVG00005009852) #28 GRM7 (ENSGEVG00005009564) #29 LMCD1 (ENSGEVG00005009447) #32 SSUH2 (ENSGEVG00005009363) #33 ENSGEVG00005009300 ENSGEVG00005009228 CAV3 (ENSGEVG00005009176) #34 OXTR (ENSGEVG00005009121) #35 RAD18 (ENSGEVG00005009041) #36 SRGAP3 (ENSGEVG00005007925) #37 Chinese turtle MODERN SPECIES 1835 ENSPSIG00000017232 #17 IL5RA (ENSPSIG00000017240) #18 TRNT1 (ENSPSIG00000017356) #19 CRBN (ENSPSIG00000017465) #20 ENSPSIG00000000072 LRRN1 (ENSPSIG00000000527) #21 ENSPSIG00000017734 #22 SUMF1 (ENSPSIG00000017744) #23 ITPR1 (ENSPSIG00000017904) #24 BHLHE40 (ENSPSIG00000018157) #26 ARL8B (ENSPSIG00000005943) #27 EDEM1 (ENSPSIG00000005957) #28 ENSPSIG00000000535 GRM7 (ENSPSIG00000006085) #29 LMCD1 (ENSPSIG00000006716) #32 SSUH2 (ENSPSIG00000006779) #33 ENSPSIG00000006832 ENSPSIG00000006837 ENSPSIG00000006843 CAV3 (ENSPSIG00000006848) #34 OXTR (ENSPSIG00000006867) #35 RAD18 (ENSPSIG00000006928) #36 Anura ANCESTRAL SPECIES 159 ENSGT00940000153541.A ENSGT00940000161454.i.a.b ENSGT00940000155198.C #17 ENSGT00940000160890 #18 ENSGT00390000009678 #19 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 ENSGT00940000163873 ENSGT00950000183006.B.f.b.b.a #34 ENSGT01050000244882.a.a.b #35 ENSGT00390000011230 #36 ENSGT00950000182824.a.b.a #37 ENSGT00530000063557.a ENSGT00390000014353 ENSGT00940000159835 Leishan spiny toad MODERN SPECIES 11 ALAS1 (ENSLLEG00000029451) POC1A (ENSLLEG00000029518) ENSLLEG00000029572 ENSLLEG00000029582 ENSLLEG00000029655 ENSLLEG00000029737 ENSLLEG00000029755 ENSLLEG00000029766 ENSLLEG00000029776 ENSLLEG00000029788 CNTN4 (ENSLLEG00000029791) #17 ENSLLEG00000029830 #18 TRNT1 (ENSLLEG00000029877) #19 CRBN (ENSLLEG00000030072) #20 LRRN1 (ENSLLEG00000030088) #21 ENSLLEG00000030102 #22 SUMF1 (ENSLLEG00000014064) #23 ITPR1 (ENSLLEG00000014236) #24 ENSLLEG00000017319 BHLHE40 (ENSLLEG00000017398) #26 ARL8B (ENSLLEG00000017797) #27 EDEM1 (ENSLLEG00000017941) #28 GRM7 (ENSLLEG00000018177) #29 LMCD1 (ENSLLEG00000018847) #32 ENSLLEG00000019021 ENSLLEG00000019153 ENSLLEG00000019332 #34 OXTR (ENSLLEG00000019366) #35 RAD18 (ENSLLEG00000019425) #36 ENSLLEG00000019942 SRGAP3 (ENSLLEG00000019969) #37 Frog MODERN SPECIES 4 poc1a (ENSXETG00000010813) alas1 (ENSXETG00000010814) borcs6 (ENSXETG00000037917) brk1 (ENSXETG00000027883) pick1 (ENSXETG00000010815) tnnc1 (ENSXETG00000010816) ENSXETG00000025093 ENSXETG00000048206 ENSXETG00000045593 ENSXETG00000042663 cntn4 (ENSXETG00000031338) #17 il5ra (ENSXETG00000032117) trnt1 (ENSXETG00000025091) #19 crbn (ENSXETG00000005146) #20 lrrn1 (ENSXETG00000005147) #21 setmar (ENSXETG00000032592) #22 ENSXETG00000039434 sumf1 (ENSXETG00000005149) #23 itpr1 (ENSXETG00000005153) #24 bhlhe40 (ENSXETG00000035212) #26 arl8b (ENSXETG00000034571) #27 edem1 (ENSXETG00000005217) #28 ENSXETG00000043187 grm7 (ENSXETG00000015711) #29 ENSXETG00000045616 lmcd1 (ENSXETG00000015748) #32 ENSXETG00000035465 XB5956430 [provisional:ssuh2] (ENSXETG00000015781) ENSXETG00000046985 oxtr (ENSXETG00000001441) #35 cav3.1 (ENSXETG00000046990) #34 Coelacanth MODERN SPECIES 2380 LRRN1 (ENSLACG00000006069) #21 setmar (ENSLACG00000008418) #22 Actinopterygii ANCESTRAL SPECIES 257 ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a ##35 ENSGT00390000016404 #20 ENSGT00940000166994 ENSGT00940000165984 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT01030000234648.a.a.d #29 ENSGT00940000158813 #32 Neopterygii ANCESTRAL SPECIES 59 ENSGT00890000139436.A.a ENSGT00940000167138 ENSGT00390000013995.b.a ENSGT00390000007605 #7 ENSGT00940000158065 #9 ENSGT00940000162859 #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000155198.A ##17 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a ##35 ENSGT00390000016404 #20 ENSGT00940000166994 ENSGT00940000165984 ENSGT00940000157154.c ##21 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00390000008983.a #23 ENSGT00940000155071.E #24 ENSGT00940000158384 #26 ENSGT00940000154861 #27 ENSGT00940000157717 #28 ENSGT00940000160395 ENSGT00940000156703 ENSGT00940000166798 ENSGT00940000156468 ENSGT00940000157842 ENSGT00390000006665.a Osteoglossocephalai ANCESTRAL SPECIES 121 ENSGT00940000155327.h ENSGT00940000157922.a ENSGT01010000222866 ENSGT00940000155616 ENSGT00390000014353 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT01050000244882.b.c.a.b ##35 ENSGT00390000016404 #20 ENSGT00940000157154.d #21 ENSGT00940000176938 ENSGT00940000165984 ENSGT00940000157154.c ##21 ENSGT00390000008983.a #23 ENSGT00940000155071.D ##24 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000158384.c #26 ENSGT00940000155071.E #24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.a ENSGT00940000162824 ENSGT00940000155125.a.b ENSGT00940000157127.b Osteoglossiformes ANCESTRAL SPECIES 54 ENSGT00390000011390 ENSGT00940000155327.g ENSGT00940000157922.b ENSGT00440000033958 ENSGT00390000014353 ENSGT00390000009678 #19 ENSGT00390000016404.h #20 ENSGT00940000157154.d.a #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000158384.c #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.b.a ENSGT00940000155125.a.b ENSGT00940000157127.b ENSGT00940000156617.e.b ENSGT00390000005780.b ENSGT00940000154932.B.m Asian bonytongue MODERN SPECIES 14 h1-10 (ENSSFOG00015021194) RAB7A (ENSSFOG00015032975) rpn1 (ENSSFOG00015021160) gata2a (ENSSFOG00015021149) eefsec (ENSSFOG00015028518) itih3a.1 (ENSSFOG00015021085) MUSTN1 (ENSSFOG00015026222) SFMBT1 (ENSSFOG00015020972) RFT1 (ENSSFOG00015020939) PRKCD (ENSSFOG00015020920) ENSSFOG00015020883 ccdc174 (ENSSFOG00015020871) vhl (ENSSFOG00015032564) trnt1 (ENSSFOG00015020844) #19 lrrn1 (ENSSFOG00015031033) #21 setmar (ENSSFOG00015033243) #22 ITPR1 (ENSSFOG00015020288) ##24 BHLHE40 (ENSSFOG00015020159) #26 arl8bb (ENSSFOG00015025882) #27 SEMA3F (ENSSFOG00015020063) camkvb (ENSSFOG00015029096) MST1R (ENSSFOG00015020011) mon1a (ENSSFOG00015019990) traip (ENSSFOG00015019883) INKA1 (ENSSFOG00015019838) gnai2a (ENSSFOG00015019793) slc38a3a (ENSSFOG00015019721) RBM5 (ENSSFOG00015019645) ENSSFOG00015019624 emc3 (ENSSFOG00015019595) ENSSFOG00015019544 P. kingsleyae MODERN SPECIES 73 SFMBT1 (ENSPKIG00000020251) RFT1 (ENSPKIG00000020189) PRKCD (ENSPKIG00000020123) ENSPKIG00000020076 ccdc174 (ENSPKIG00000020044) trnt1 (ENSPKIG00000020015) #19 crbn (ENSPKIG00000019998) #20 lrrn1 (ENSPKIG00000019990) #21 setmar (ENSPKIG00000019979) #22 ENSPKIG00000019955 ITPR1 (ENSPKIG00000019872) ##24 BHLHE40 (ENSPKIG00000019834) #26 arl8bb (ENSPKIG00000019809) #27 SEMA3F (ENSPKIG00000019667) camkvb (ENSPKIG00000019579) ENSPKIG00000019529 mon1a (ENSPKIG00000019496) traip (ENSPKIG00000019437) ENSPKIG00000019423 gnai2a (ENSPKIG00000019398) slc38a3a (ENSPKIG00000019264) RBM5 (ENSPKIG00000019187) emc3 (ENSPKIG00000019158) ENSPKIG00000019082 Clupeocephala ANCESTRAL SPECIES 20 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.a ENSGT00940000162824 ENSGT00940000155125.a.b ENSGT00940000157127.b ENSGT00940000156617.e.b ENSGT00390000005780.b Otomorpha ANCESTRAL SPECIES 112 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.a ENSGT00940000155125.a.b ENSGT00940000157127.b Clupeiformes ANCESTRAL SPECIES 27 ENSGT00950000183062.a.a.a #11 ENSGT00940000162859.o #10 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000165920.b ENSGT00940000165309 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00950000183080.a.a.f ENSGT00940000156107.e.b ENSGT00940000154281 ENSGT00950000182897.A ENSGT00940000156561.a.b.b ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000005197.b Atlantic herring MODERN SPECIES 21 pdzrn3b (ENSCHAG00000025689) #11 ppp4r2b (ENSCHAG00000025680) #10 gxylt2 (ENSCHAG00000025668) #9 shq1 (ENSCHAG00000025662) #7 RYBP (ENSCHAG00000025660) prok2 (ENSCHAG00000025655) gpr27 (ENSCHAG00000025654) foxp1b (ENSCHAG00000025407) zgc:113054 (ENSCHAG00000025384) mitfa (ENSCHAG00000025374) FRMD4B (ENSCHAG00000025306) arl6ip5a (ENSCHAG00000025298) trnt1 (ENSCHAG00000025289) #19 ENSCHAG00000025284 ##35 lrrn1 (ENSCHAG00000025281) #21 setmar (ENSCHAG00000025278) #22 ITPR1 (ENSCHAG00000018029) ##24 bhlhe40 (ENSCHAG00000017831) #26 ARF3 (ENSCHAG00000017812) ERBB3 (ENSCHAG00000013607) pa2g4a (ENSCHAG00000013406) ENSCHAG00000013385 zc3h10 (ENSCHAG00000013378) ESYT1 (ENSCHAG00000012701) eif6 (ENSCHAG00000012670) MMP24 (ENSCHAG00000012095) fam83c (ENSCHAG00000012082) uqcc1 (ENSCHAG00000012054) GDF5 (ENSCHAG00000012012) sdc4 (ENSCHAG00000011995) oser1 (ENSCHAG00000011989) Denticle herring MODERN SPECIES 3 pdzrn3b (ENSDCDG00000034720) #11 ppp4r2b (ENSDCDG00000034728) #10 gxylt2 (ENSDCDG00000034731) #9 shq1 (ENSDCDG00000034732) #7 rybpb (ENSDCDG00000034734) prok2 (ENSDCDG00000034735) gpr27 (ENSDCDG00000034737) foxp1b (ENSDCDG00000034762) zgc:113054 (ENSDCDG00000034956) mitfa (ENSDCDG00000034964) FRMD4B (ENSDCDG00000034978) arl6ip5a (ENSDCDG00000034990) trnt1 (ENSDCDG00000034993) #19 ENSDCDG00000034996 ##35 lrrn1 (ENSDCDG00000002962) #21 setmar (ENSDCDG00000002977) #22 ENSDCDG00000003598 ##24 ENSDCDG00000013280 bhlhe40 (ENSDCDG00000013282) #26 arf3b (ENSDCDG00000013288) ERBB3 (ENSDCDG00000013741) pa2g4a (ENSDCDG00000024781) zc3h10 (ENSDCDG00000024787) ESYT1 (ENSDCDG00000024805) eif6 (ENSDCDG00000025528) MMP24 (ENSDCDG00000025557) fam83c (ENSDCDG00000025700) uqcc1 (ENSDCDG00000025703) GDF5 (ENSDCDG00000025709) sdc4 (ENSDCDG00000025712) oser1 (ENSDCDG00000025729) Otophysi ANCESTRAL SPECIES 233 ENSGT00390000004581 ENSGT00940000156015 ENSGT00930000151052 ENSGT00440000038072.d ENSGT00940000159736.b ENSGT01030000234637.a.a.a.b ENSGT00550000074958 ENSGT01030000234563.a.a.c.b.b ENSGT00950000183006.A.a.a.b ##34 ENSGT00950000182998.C.b.b ENSGT00940000158328 ENSGT01030000234595.B.c.a.d ENSGT00390000016901.a ENSGT00940000165239.a ENSGT00390000011082 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.a ENSGT00940000155125.a.b ENSGT00940000157127.b Characiphysae ANCESTRAL SPECIES 29 ENSGT00940000156015 ENSGT00930000151052 ENSGT00440000038072.d ENSGT00940000159736.b ENSGT01030000234637.a.a.a.b ENSGT00550000074958 ENSGT01030000234563.a.a.c.b.b ENSGT00950000183006.A.a.a.b ##34 ENSGT00950000182998.C.b.b ENSGT00940000158328 ENSGT01030000234595.B.c.a.d ENSGT00390000016901.a ENSGT00940000165239.a ENSGT00940000180975 ENSGT00390000011082 ENSGT00940000162663 #22 ENSGT00940000155071.C.a ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.a ENSGT00940000155125.a.b ENSGT00940000157127.b ENSGT00940000155766.b ENSGT01100000263502.A.b.a.b ENSGT00940000154839.B ENSGT00940000155552.q.b Characiphysae_b ANCESTRAL SPECIES 26 ENSGT00940000156015 ENSGT00930000151052 ENSGT00440000038072.d ENSGT00940000159736.b ENSGT01030000234637.a.a.a.b ENSGT00550000074958 ENSGT01030000234563.a.a.c.b.b ENSGT00950000183006.A.a.a.b ##34 ENSGT00950000182998.C.b.b ENSGT00940000158328 ENSGT01030000234595.B.c.a.d ENSGT00390000016901.a ENSGT00940000165239.a ENSGT00940000180975 ENSGT00390000011082 ENSGT00940000162663 #22 ENSGT00940000155071.C.a ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.a ENSGT00940000155125.a.b ENSGT00940000157127.b ENSGT00940000155766.b Characoidei ANCESTRAL SPECIES 15 ENSGT00940000156015 ENSGT00930000151052 ENSGT00440000038072.d ENSGT00940000159736.b ENSGT01030000234637.a.a.a.b ENSGT00550000074958 ENSGT01030000234563.a.a.c.b.b ENSGT00950000183006.A.a.a.b ##34 ENSGT00950000182998.C.b.b ENSGT00940000158328 ENSGT01030000234595.B.c.a.d ENSGT00390000016901.a.a ENSGT00940000165239.a ENSGT00940000180975 ENSGT00390000011082 ENSGT00940000162663 #22 ENSGT00940000155071.C.a ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.a ENSGT00940000155125.a.b ENSGT00940000157127.b ENSGT00940000155766.b ENSGT01100000263502.A.b.a.b ENSGT00940000154839.B ENSGT00940000155552.q.b Red-bellied piranha MODERN SPECIES 6 USP48 (ENSPNAG00000016189) ENSPNAG00000016242 cyb561d1 (ENSPNAG00000016252) atxn7l2a (ENSPNAG00000016270) sypl2a (ENSPNAG00000016293) psma5 (ENSPNAG00000016331) sort1a (ENSPNAG00000016351) cav4a (ENSPNAG00000016370) ##34 ENSPNAG00000016379 rrp9 (ENSPNAG00000005788) grm2b (ENSPNAG00000016434) TEX264 (ENSPNAG00000016442) ENSPNAG00000016445 ENSPNAG00000016467 BRK1 (ENSPNAG00000016475) setmar (ENSPNAG00000016483) #22 ITPR1 (ENSPNAG00000017264) ##24 bhlhe40 (ENSPNAG00000017319) #26 arl8bb (ENSPNAG00000017354) #27 Mexicana tetra MODERN SPECIES 14 ENSAMXG00000035874 arfgap1 (ENSAMXG00000038178) ELMO2 (ENSAMXG00000024695) ITGA7 (ENSAMXG00000024694) npffl (ENSAMXG00000033520) ENSAMXG00000030865 nckap1l (ENSAMXG00000024691) ENSAMXG00000040289 ENSAMXG00000039702 ENSAMXG00000042985 nr1d4b (ENSAMXG00000035331) TEX264 (ENSAMXG00000034798) ENSAMXG00000034328 ENSAMXG00000030605 BRK1 (ENSAMXG00000036652) setmar (ENSAMXG00000032934) #22 ITPR1 (ENSAMXG00000006873) ##24 bhlhe40 (ENSAMXG00000036916) #26 arl8bb (ENSAMXG00000032775) #27 ENSAMXG00000040787 SEMA3F (ENSAMXG00000007053) camkvb (ENSAMXG00000043166) ENSAMXG00000007117 mon1a (ENSAMXG00000040493) traip (ENSAMXG00000030724) inka1a (ENSAMXG00000041740) gnai2a (ENSAMXG00000007141) slc38a3a (ENSAMXG00000007148) zmp:0000001006 (ENSAMXG00000040523) zmp:0000001138 (ENSAMXG00000007162) ENSAMXG00000007164 Electric eel MODERN SPECIES 185 ENSEEEG00000009709 cyb561d1 (ENSEEEG00000009710) atxn7l2a (ENSEEEG00000009712) sypl2a (ENSEEEG00000009713) psma5 (ENSEEEG00000009714) sort1a (ENSEEEG00000009720) ENSEEEG00000009728 nfya (ENSEEEG00000009729) cav4a (ENSEEEG00000009730) ##34 ENSEEEG00000009731 rrp9 (ENSEEEG00000009740) grm2b (ENSEEEG00000009859) TEX264 (ENSEEEG00000009860) ENSEEEG00000009861 BRK1 (ENSEEEG00000009864) setmar (ENSEEEG00000009866) #22 ENSEEEG00000009870 ##24 Channel catfish MODERN SPECIES 13 zbtb40 (ENSIPUG00000022108) CYB561D1 (ENSIPUG00000022102) atxn7l2 (ENSIPUG00000022081) Sypl1 (ENSIPUG00000022069) psma5 (ENSIPUG00000022043) sort1 (ENSIPUG00000022008) nfya (ENSIPUG00000021947) cav4a (ENSIPUG00000021943) ##34 ENSIPUG00000021941 rrp9 (ENSIPUG00000021918) grm2b (ENSIPUG00000021899) TEX264 (ENSIPUG00000021887) ENSIPUG00000021879 ENSIPUG00000021875 brk1 (ENSIPUG00000021866) setmar (ENSIPUG00000021862) #22 ITPR1 (ENSIPUG00000021797) ##24 BHLHE40 (ENSIPUG00000021779) #26 arl8bb (ENSIPUG00000021761) #27 Sema3f (ENSIPUG00000021126) camkv (ENSIPUG00000021099) MST1R (ENSIPUG00000021073) sand (ENSIPUG00000021060) Traip (ENSIPUG00000021041) inka1a (ENSIPUG00000021034) gnai2a (ENSIPUG00000021023) slc38a3 (ENSIPUG00000020967) ENSIPUG00000020959 ENSIPUG00000020924 cacna1da (ENSIPUG00000020039) BICD2 (ENSIPUG00000019989) Cyprinoidei ANCESTRAL SPECIES 27 ENSGT00940000156015 ENSGT00930000151052 ENSGT00440000038072.d ENSGT00940000159736.b ENSGT01030000234637.a.a.a.b ENSGT00550000074958 ENSGT01030000234563.a.a.c.b.b ENSGT00950000183006.A.a.a.b ##34 ENSGT00950000182998.C.b.b ENSGT00940000158328 ENSGT01030000234595.B.c.a.d ENSGT00390000016901.a ENSGT00940000170109 ENSGT00940000156150.w ENSGT00390000011082 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT00530000063849.A.a ENSGT00940000155125.a.b ENSGT00940000157127.b ENSGT00390000013132.b.a ENSGT00940000166464 ENSGT00940000174829 ENSGT00940000154791 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 61 ENSGT00940000156015.e ENSGT00930000151052.d ENSGT00440000038072.d.g.a ENSGT00940000159736.b.a ENSGT01030000234637.a.a.a.b.b ENSGT00550000074958.`b ENSGT01030000234563.a.a.c.b.b.b ENSGT00390000015714.o.b ENSGT00950000183006.A.a.a.b ##34 ENSGT00950000182998.C.b.b.e ENSGT00940000158328.c ENSGT01030000234595.B.c.a.d.c ENSGT00390000016901.a.d ENSGT00940000170109 ENSGT00390000011082.rb ENSGT00940000162663.a #22 ENSGT00940000155071.C.c.b ##24 ENSGT00940000158384.d.a #26 ENSGT00940000154861.n.a.b #27 ENSGT00940000156703.e.a.d ENSGT00940000156468.f.b ENSGT00940000157842.b ENSGT00390000006665.a.c ENSGT00390000007696.k ENSGT00530000063849.A.a.e ENSGT00940000155125.a.b.a ENSGT00940000157127.b.b ENSGT00390000013132.b.a.f ENSGT00940000166464.a ENSGT00940000174829 ENSGT00940000154089.a.c.b Cyprininae_a ANCESTRAL SPECIES 3 ENSGT00940000156015.e ENSGT00930000151052.d ENSGT00440000038072.d.g.a ENSGT00940000159736.b.a ENSGT01030000234637.a.a.a.b.b ENSGT00550000074958.`b ENSGT01030000234563.a.a.c.b.b.b ENSGT00390000015714.o.b ENSGT00950000183006.A.a.a.b ##34 ENSGT00950000182998.C.b.b.e ENSGT00940000158328.c ENSGT01030000234595.B.c.a.d.c ENSGT00390000016901.a.d ENSGT00940000170109 ENSGT00390000011082.rb ENSGT00940000162663.a #22 ENSGT00940000155071.C.c.b ##24 ENSGT00940000158384.d.a #26 ENSGT00940000154861.n.a.b #27 ENSGT00940000156703.e.a.d ENSGT00940000156468.f.b ENSGT00940000157842.b.a ENSGT00390000006665.a.c ENSGT00390000007696.k ENSGT00530000063849.A.a.e ENSGT00940000155125.a.b.a ENSGT00940000157127.b.b ENSGT00390000013132.b.a.f ENSGT00940000166464.a ENSGT00940000174829 ENSGT00940000154089.a.c.b Common carp reference MODERN SPECIES 42 ENSCCRG00000008305 ENSCCRG00000042985 ENSCCRG00000061690 cyb561d1 (ENSCCRG00000059998) atxn7l2a (ENSCCRG00000008164) sypl2a (ENSCCRG00000008151) psma5 (ENSCCRG00000008130) sort1a (ENSCCRG00000029858) nfya (ENSCCRG00000029825) cav4a (ENSCCRG00000054690) ##34 ENSCCRG00000060193 rrp9 (ENSCCRG00000038199) grm2b (ENSCCRG00000040374) TEX264 (ENSCCRG00000080528) brk1 (ENSCCRG00000077197) setmar (ENSCCRG00000050849) #22 ITPR1 (ENSCCRG00000070404) ##24 ENSCCRG00000031281 bhlhe40 (ENSCCRG00000035683) #26 arl8bb (ENSCCRG00000063563) #27 ENSCCRG00000023758 ENSCCRG00000017394 mon1a (ENSCCRG00000017385) traip (ENSCCRG00000017325) inka1a (ENSCCRG00000058363) gnai2a (ENSCCRG00000050816) slc38a3a (ENSCCRG00000017772) chchd4a (ENSCCRG00000073866) ENSCCRG00000073157 ENSCCRG00000028910 mapkapk3 (ENSCCRG00000015875) Golden-line barbel MODERN SPECIES 43 LDLRAD2 (ENSSGRG00000038351) USP48 (ENSSGRG00000038287) ENSSGRG00000038280 atxn7l2a (ENSSGRG00000038276) sypl2a (ENSSGRG00000038274) psma5 (ENSSGRG00000038247) sort1a (ENSSGRG00000037966) cav4a (ENSSGRG00000037957) ##34 nfya (ENSSGRG00000037954) ENSSGRG00000037953 rrp9 (ENSSGRG00000037952) grm2b (ENSSGRG00000037951) TEX264 (ENSSGRG00000037950) gpx1a (ENSSGRG00000037947) BRK1 (ENSSGRG00000037941) setmar (ENSSGRG00000037940) #22 ENSSGRG00000037938 ##24 Goldfish MODERN SPECIES 29 ENSCARG00000023801 LDLRAD2 (ENSCARG00000023790) USP48 (ENSCARG00000023200) cyb561d1 (ENSCARG00000023155) atxn7l2a (ENSCARG00000023151) sypl2a (ENSCARG00000023145) psma5 (ENSCARG00000023136) sort1a (ENSCARG00000022910) nfya (ENSCARG00000022872) cav4a (ENSCARG00000022861) ##34 ENSCARG00000022856 rrp9 (ENSCARG00000022696) grm2b (ENSCARG00000022680) TEX264 (ENSCARG00000022674) BRK1 (ENSCARG00000022667) setmar (ENSCARG00000022663) #22 ENSCARG00000022657 ITPR1 (ENSCARG00000021084) ##24 bhlhe40 (ENSCARG00000020963) #26 SEMA3F (ENSCARG00000020745) arl8bb (ENSCARG00000020699) #27 camkvb (ENSCARG00000020662) ENSCARG00000020654 ENSCARG00000020589 mon1a (ENSCARG00000020575) traip (ENSCARG00000020386) inka1a (ENSCARG00000020364) gnai2a (ENSCARG00000020348) slc38a3a (ENSCARG00000020239) chchd4a (ENSCARG00000020222) ENSCARG00000020209 Cyprininae ANCESTRAL SPECIES 310 ENSGT00390000004581.b ENSGT00940000156015.f ENSGT00930000151052.c ENSGT00440000038072.d.h ENSGT00940000159736.b.b ENSGT01030000234637.a.a.a.b.a ENSGT00550000074958.ab ENSGT01030000234563.a.a.c.b.b.a ENSGT00390000015714.o.a ENSGT00950000182998.C.b.b.f ENSGT00940000158328.d ENSGT01030000234595.B.c.a.d.d ENSGT00390000016901.a.c ENSGT00940000156150.w ENSGT00390000011082.sb ENSGT00940000162663.b #22 ENSGT00940000155071.C.d ##24 ENSGT00940000158384.d.b #26 ENSGT00940000154861.n.a.a #27 ENSGT00940000156703.e.a.c ENSGT00940000156468.f.a ENSGT00390000006665.a.d ENSGT00390000007696.l ENSGT00530000063849.A.a.f ENSGT00940000155125.a.b.b ENSGT00940000157127.b.a ENSGT00390000013132.b.a.e ENSGT00940000166464.b ENSGT00940000154791 ENSGT00940000154089.a.c.a ENSGT00950000182835.c.d.c.a.a Cyprininae_a ANCESTRAL SPECIES 9 ENSGT00390000004581.b ENSGT00940000156015.f ENSGT00930000151052.c ENSGT00440000038072.d.h ENSGT00940000159736.b.b ENSGT01030000234637.a.a.a.b.a ENSGT00550000074958.ab ENSGT01030000234563.a.a.c.b.b.a ENSGT00390000015714.o.a ENSGT00950000182998.C.b.b.f ENSGT00940000158328.d ENSGT01030000234595.B.c.a.d.d ENSGT00390000016901.a.c ENSGT00940000165239.b.a ENSGT00390000011082.sb ENSGT00940000162663.b #22 ENSGT00940000155071.C.d ##24 ENSGT00940000158384.d.b #26 ENSGT00940000154861.n.a.a #27 ENSGT00940000156703.e.a.c ENSGT00940000156468.f.a ENSGT00940000157842.b.b ENSGT00390000006665.a.d ENSGT00390000007696.l ENSGT00530000063849.A.a.f ENSGT00940000155125.a.b.b ENSGT00940000157127.b.a ENSGT00390000013132.b.a.e ENSGT00940000166464.b ENSGT00940000154791 ENSGT00940000154089.a.c.a Common carp reference MODERN SPECIES 13 ENSCCRG00000008215 cyb561d1 (ENSCCRG00000071586) ENSCCRG00000038917 atxn7l2a (ENSCCRG00000072879) psma5 (ENSCCRG00000038900) sypl2a (ENSCCRG00000056618) sort1a (ENSCCRG00000038107) nfya (ENSCCRG00000038066) cav4a (ENSCCRG00000070986) ##34 ENSCCRG00000060879 rrp9 (ENSCCRG00000068781) grm2b (ENSCCRG00000037972) TEX264 (ENSCCRG00000057102) gpx1a (ENSCCRG00000061411) ENSCCRG00000073213 setmar (ENSCCRG00000055297) #22 ITPR1 (ENSCCRG00000001660) ##24 bhlhe40 (ENSCCRG00000025691) #26 arl8bb (ENSCCRG00000058977) #27 ENSCCRG00000047445 camkvb (ENSCCRG00000023772) ENSCCRG00000045469 mon1a (ENSCCRG00000045456) traip (ENSCCRG00000081663) inka1a (ENSCCRG00000017906) gnai2a (ENSCCRG00000061973) slc38a3a (ENSCCRG00000080470) chchd4a (ENSCCRG00000064388) ENSCCRG00000077935 ENSCCRG00000003595 mapkapk3 (ENSCCRG00000028911) Zebrafish MODERN SPECIES 2 LDLRAD2 (ENSDARG00000090297) USP48 (ENSDARG00000090301) ENSDARG00000091762 cyb561d1 (ENSDARG00000055295) atxn7l2a (ENSDARG00000055300) sypl2a (ENSDARG00000055307) psma5 (ENSDARG00000003526) sort1a (ENSDARG00000029402) nfya (ENSDARG00000042004) cav4a (ENSDARG00000003632) ##34 ENSDARG00000012496 rrp9 (ENSDARG00000041991) grm2b (ENSDARG00000007195) gpx1a (ENSDARG00000018146) brk1 (ENSDARG00000041974) setmar (ENSDARG00000074836) #22 ITPR1 (ENSDARG00000074149) ##24 bhlhe40 (ENSDARG00000004060) #26 arl8bb (ENSDARG00000070318) #27 SEMA3F (ENSDARG00000055373) camkvb (ENSDARG00000005141) ENSDARG00000004871 mon1a (ENSDARG00000078585) traip (ENSDARG00000011262) inka1a (ENSDARG00000070360) gnai2a (ENSDARG00000018174) slc38a3a (ENSDARG00000027065) chchd4a (ENSDARG00000033376) ENSDARG00000061260 DNAH1 (ENSDARG00000100115) mapkapk3 (ENSDARG00000111612) Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Acanthomorphata ANCESTRAL SPECIES 42 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000181580 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000181580 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a.n ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Anabantaria ANCESTRAL SPECIES ENSGT00940000162859.o #10 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000181580 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a.n ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000162859.o #10 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a.n ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Climbing perch MODERN SPECIES 18 gxylt2 (ENSATEG00000008453) #9 shq1 (ENSATEG00000008475) #7 RYBP (ENSATEG00000029830) prok2 (ENSATEG00000008492) gpr27 (ENSATEG00000008522) EIF4E3 (ENSATEG00000008530) foxp1b (ENSATEG00000008561) zgc:113054 (ENSATEG00000008721) zgc:113054 (ENSATEG00000008772) mitfa (ENSATEG00000008837) FRMD4B (ENSATEG00000008872) arl6ip5a (ENSATEG00000008916) trnt1 (ENSATEG00000008928) #19 ENSATEG00000008955 ##35 lrrn1 (ENSATEG00000008988) #21 setmar (ENSATEG00000008998) #22 ITPR1 (ENSATEG00000009014) ##24 bhlhe40 (ENSATEG00000009176) #26 ENSATEG00000009196 arl8bb (ENSATEG00000028465) #27 ENSATEG00000009213 camkvb (ENSATEG00000009278) ENSATEG00000009407 mon1a (ENSATEG00000009424) traip (ENSATEG00000009440) grm6b (ENSATEG00000009522) ##29 comtb (ENSATEG00000009551) ENSATEG00000009561 ccdc120b (ENSATEG00000009583) mbd1b (ENSATEG00000009608) cxxc1b (ENSATEG00000009642) Siamese fighting fish MODERN SPECIES 16 ppp4r2b (ENSBSLG00000021096) #10 gxylt2 (ENSBSLG00000021059) #9 shq1 (ENSBSLG00000021007) #7 rybpa (ENSBSLG00000020783) prok2 (ENSBSLG00000020780) gpr27 (ENSBSLG00000020778) EIF4E3 (ENSBSLG00000020777) foxp1b (ENSBSLG00000020745) zgc:113054 (ENSBSLG00000020737) mitfa (ENSBSLG00000020732) FRMD4B (ENSBSLG00000020719) arl6ip5a (ENSBSLG00000020715) trnt1 (ENSBSLG00000020713) #19 ENSBSLG00000020712 ##35 lrrn1 (ENSBSLG00000020709) #21 setmar (ENSBSLG00000020708) #22 ITPR1 (ENSBSLG00000013775) ##24 bhlhe40 (ENSBSLG00000013372) #26 NAAA (ENSBSLG00000013286) arl8bb (ENSBSLG00000013136) #27 SEMA3F (ENSBSLG00000010913) camkvb (ENSBSLG00000010678) ENSBSLG00000010560 mon1a (ENSBSLG00000010555) traip (ENSBSLG00000010544) grm6b (ENSBSLG00000010337) ##29 comtb (ENSBSLG00000010327) SRPK3 (ENSBSLG00000009779) ccdc120b (ENSBSLG00000009387) mbd1b (ENSBSLG00000009328) cxxc1b (ENSBSLG00000008835) Zig-zag eel MODERN SPECIES 19 ppp4r2b (ENSMAMG00000023435) #10 gxylt2 (ENSMAMG00000023433) #9 shq1 (ENSMAMG00000023432) #7 RYBP (ENSMAMG00000024392) prok2 (ENSMAMG00000023429) gpr27 (ENSMAMG00000023427) EIF4E3 (ENSMAMG00000023426) foxp1b (ENSMAMG00000023423) zgc:113054 (ENSMAMG00000023417) mitfa (ENSMAMG00000023414) FRMD4B (ENSMAMG00000023408) arl6ip5a (ENSMAMG00000023405) trnt1 (ENSMAMG00000023401) #19 ENSMAMG00000023400 ##35 lrrn1 (ENSMAMG00000023397) #21 setmar (ENSMAMG00000023395) #22 ITPR1 (ENSMAMG00000023390) ##24 ENSMAMG00000024536 bhlhe40 (ENSMAMG00000023386) #26 ENSMAMG00000023384 ENSMAMG00000023382 arl8bb (ENSMAMG00000027917) #27 ENSMAMG00000023374 camkvb (ENSMAMG00000023367) ENSMAMG00000023360 traip (ENSMAMG00000023357) mon1a (ENSMAMG00000023358) grm6b (ENSMAMG00000023356) ##29 comtb (ENSMAMG00000023349) ENSMAMG00000023345 ccdc120b (ENSMAMG00000024568) Carangaria ANCESTRAL SPECIES 3 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a.n ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Carangaria_A ANCESTRAL SPECIES 7 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a.n ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Seriola ANCESTRAL SPECIES 10 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a.n ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Yellowtail amberjack MODERN SPECIES 2631 mitfa (ENSSLDG00000009140) FRMD4B (ENSSLDG00000009202) arl6ip5a (ENSSLDG00000009316) trnt1 (ENSSLDG00000009325) #19 ENSSLDG00000009355 ##35 lrrn1 (ENSSLDG00000009364) #21 setmar (ENSSLDG00000009370) #22 ITPR1 (ENSSLDG00000009407) ##24 bhlhe40 (ENSSLDG00000009545) #26 NAAA (ENSSLDG00000009564) arl8bb (ENSSLDG00000009588) #27 SEMA3F (ENSSLDG00000009613) camkvb (ENSSLDG00000009673) MST1R (ENSSLDG00000009798) mon1a (ENSSLDG00000009834) traip (ENSSLDG00000009865) grm6b (ENSSLDG00000009921) ##29 comtb (ENSSLDG00000009969) ENSSLDG00000009983 Greater amberjack MODERN SPECIES 37 ENSSDUG00000012010 ENSSDUG00000012021 prok2 (ENSSDUG00000012033) gpr27 (ENSSDUG00000012040) EIF4E3 (ENSSDUG00000012045) foxp1b (ENSSDUG00000012073) mdfic2 (ENSSDUG00000012140) zgc:113054 (ENSSDUG00000012153) ENSSDUG00000012183 mitfa (ENSSDUG00000012198) FRMD4B (ENSSDUG00000012222) arl6ip5a (ENSSDUG00000012308) trnt1 (ENSSDUG00000012320) #19 ENSSDUG00000012333 ##35 lrrn1 (ENSSDUG00000012348) #21 setmar (ENSSDUG00000012353) #22 ITPR1 (ENSSDUG00000012375) ##24 bhlhe40 (ENSSDUG00000012494) #26 NAAA (ENSSDUG00000012503) arl8bb (ENSSDUG00000012529) #27 ENSSDUG00000012547 SEMA3F (ENSSDUG00000012565) camkvb (ENSSDUG00000012707) MST1R (ENSSDUG00000012803) mon1a (ENSSDUG00000012873) traip (ENSSDUG00000012887) grm6b (ENSSDUG00000012908) ##29 comtb (ENSSDUG00000012936) SRPK3 (ENSSDUG00000012949) ccdc120b (ENSSDUG00000012978) mbd1b (ENSSDUG00000012996) Barramundi perch MODERN SPECIES 150 gxylt2 (ENSLCAG00010025984) #9 shq1 (ENSLCAG00010025985) #7 rybpa (ENSLCAG00010025986) prok2 (ENSLCAG00010025987) gpr27 (ENSLCAG00010025988) EIF4E3 (ENSLCAG00010025989) foxp1b (ENSLCAG00010026063) mdfic2 (ENSLCAG00010026283) zgc:113054 (ENSLCAG00010026285) mitfa (ENSLCAG00010026304) FRMD4B (ENSLCAG00010026341) arl6ip5a (ENSLCAG00010026345) trnt1 (ENSLCAG00010026346) #19 ENSLCAG00010026347 ##35 lrrn1 (ENSLCAG00010026349) #21 setmar (ENSLCAG00010026350) #22 ITPR1 (ENSLCAG00010026357) ##24 Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00940000162859.o #10 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309.l ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a.n ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 ENSGT00940000157503.i.b Turbot MODERN SPECIES 18 ppp4r2b (ENSSMAG00000016193) #10 gxylt2 (ENSSMAG00000016180) #9 shq1 (ENSSMAG00000016151) #7 ENSSMAG00000023389 prok2 (ENSSMAG00000016123) gpr27 (ENSSMAG00000016102) EIF4E3 (ENSSMAG00000016095) foxp1b (ENSSMAG00000015987) zgc:113054 (ENSSMAG00000015942) mitfa (ENSSMAG00000015617) FRMD4B (ENSSMAG00000015504) arl6ip5a (ENSSMAG00000015475) trnt1 (ENSSMAG00000015432) #19 ENSSMAG00000026170 ##35 lrrn1 (ENSSMAG00000015413) #21 setmar (ENSSMAG00000015405) #22 bhlhe40 (ENSSMAG00000026563) #26 ENSSMAG00000015251 ENSSMAG00000022883 arl8bb (ENSSMAG00000036408) #27 ENSSMAG00000015037 camkvb (ENSSMAG00000015020) ENSSMAG00000014995 mon1a (ENSSMAG00000014977) traip (ENSSMAG00000014911) grm6b (ENSSMAG00000014847) ##29 comtb (ENSSMAG00000014805) ENSSMAG00000014783 ccdc120b (ENSSMAG00000014764) mbd1b (ENSSMAG00000014640) cxxc1b (ENSSMAG00000014604) Tongue sole MODERN SPECIES 2 WDR1 (ENSCSEG00000017806) idh3b (ENSCSEG00000017767) ptpra (ENSCSEG00000017739) gnrh2 (ENSCSEG00000017724) ENSCSEG00000017716 aldh1l1 (ENSCSEG00000017684) ENSCSEG00000017670 MTMR14 (ENSCSEG00000017658) ENSCSEG00000017588 ENSCSEG00000017520 fezf2 (ENSCSEG00000017502) ENSCSEG00000017480 LDLRAD2 (ENSCSEG00000017469) ENSCSEG00000017456 USP48 (ENSCSEG00000017261) setmar (ENSCSEG00000017235) #22 ENSCSEG00000017230 #24 ENSCSEG00000017181 ##24 hdac11 (ENSCSEG00000017168) ENSCSEG00000017156 ENSCSEG00000017146 IQSEC1 (ENSCSEG00000017123) acad9 (ENSCSEG00000017056) ENSCSEG00000017040 CFAP57 (ENSCSEG00000016999) nuf2 (ENSCSEG00000016956) ap5b1 (ENSCSEG00000016947) zgc:112255 (ENSCSEG00000016938) P3H1 (ENSCSEG00000016927) ENSCSEG00000016925 ##29 nudt3b (ENSCSEG00000016923) Eupercaria ANCESTRAL SPECIES ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Eupecaria_A ANCESTRAL SPECIES ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Ballan wrasse MODERN SPECIES 61 foxp1b (ENSLBEG00000019691) zgc:113054 (ENSLBEG00000019640) ENSLBEG00000019618 mitfa (ENSLBEG00000019594) FRMD4B (ENSLBEG00000019520) arl6ip5a (ENSLBEG00000019488) trnt1 (ENSLBEG00000019457) #19 ENSLBEG00000019439 ##35 lrrn1 (ENSLBEG00000019424) #21 setmar (ENSLBEG00000019413) #22 ITPR1 (ENSLBEG00000019256) ##24 bhlhe40 (ENSLBEG00000019219) #26 NAAA (ENSLBEG00000019157) arl8bb (ENSLBEG00000019016) #27 SEMA3F (ENSLBEG00000018957) camkvb (ENSLBEG00000018889) MST1R (ENSLBEG00000018750) mon1a (ENSLBEG00000018702) traip (ENSLBEG00000018662) grm6b (ENSLBEG00000018623) ##29 comtb (ENSLBEG00000018603) SRPK3 (ENSLBEG00000018572) ccdc120b (ENSLBEG00000018545) ENSLBEG00000018506 cxxc1b (ENSLBEG00000018337) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Perciformes ANCESTRAL SPECIES ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Cottioidei ANCESTRAL SPECIES ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Lumpfish MODERN SPECIES 20 ppp4r2b (ENSCLMG00005020517) #10 gxylt2 (ENSCLMG00005020518) #9 shq1 (ENSCLMG00005020519) #7 rybpa (ENSCLMG00005020520) prok2 (ENSCLMG00005020521) gpr27 (ENSCLMG00005020522) EIF4E3 (ENSCLMG00005000065) foxp1b (ENSCLMG00005000158) zgc:113054 (ENSCLMG00005000299) mitfa (ENSCLMG00005000306) FRMD4B (ENSCLMG00005000334) arl6ip5a (ENSCLMG00005000354) trnt1 (ENSCLMG00005000360) #19 ENSCLMG00005000366 ##35 lrrn1 (ENSCLMG00005000418) #21 setmar (ENSCLMG00005000422) #22 ENSCLMG00005000519 ##24 bhlhe40 (ENSCLMG00005003585) #26 ENSCLMG00005003609 MX1 (ENSCLMG00005007189) thoc7 (ENSCLMG00005007730) ATXN7 (ENSCLMG00005007731) psmd6 (ENSCLMG00005007733) slc2a9l1 (ENSCLMG00005007738) prickle2b (ENSCLMG00005007739) ADAMTS9 (ENSCLMG00005007866) magi1b (ENSCLMG00005007870) slc25a26 (ENSCLMG00005007874) ENSCLMG00005007876 ENSCLMG00005007877 LRIG1 (ENSCLMG00005007878) Stickleback MODERN SPECIES 17 ppp4r2b (ENSGACG00000011779) #10 gxylt2 (ENSGACG00000011788) #9 shq1 (ENSGACG00000011797) #7 RYBP (ENSGACG00000011809) prok2 (ENSGACG00000011815) gpr27 (ENSGACG00000011823) EIF4E3 (ENSGACG00000011825) foxp1b (ENSGACG00000011839) zgc:113054 (ENSGACG00000011845) ENSGACG00000011871 mitfa (ENSGACG00000011875) FRMD4B (ENSGACG00000011892) arl6ip5a (ENSGACG00000011898) trnt1 (ENSGACG00000011903) #19 lrrn1 (ENSGACG00000011915) #21 setmar (ENSGACG00000011919) #22 ITPR1 (ENSGACG00000011921) ##24 bhlhe40 (ENSGACG00000011940) #26 ENSGACG00000011962 NAAA (ENSGACG00000011964) arl8bb (ENSGACG00000011972) #27 SEMA3F (ENSGACG00000011989) camkvb (ENSGACG00000011998) ENSGACG00000012007 mon1a (ENSGACG00000012037) traip (ENSGACG00000012044) grm6b (ENSGACG00000012070) ##29 comtb (ENSGACG00000012090) SRPK3 (ENSGACG00000012098) ccdc120b (ENSGACG00000012102) ENSGACG00000012106 Perciformes_a ANCESTRAL SPECIES 27 ENSGT00940000162859.o #10 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Channel bull blenny MODERN SPECIES 19 NXPE3 (ENSCGOG00000020413) NXPE3 (ENSCGOG00000020414) ENSCGOG00000020418 ENSCGOG00000020419 prok2 (ENSCGOG00000020420) gpr27 (ENSCGOG00000020421) EIF4E3 (ENSCGOG00000020423) foxp1b (ENSCGOG00000020445) zgc:113054 (ENSCGOG00000021042) mitfa (ENSCGOG00000021055) FRMD4B (ENSCGOG00000021135) arl6ip5a (ENSCGOG00000021199) trnt1 (ENSCGOG00000021203) #19 ENSCGOG00000021223 ##35 lrrn1 (ENSCGOG00000021224) #21 setmar (ENSCGOG00000021226) #22 ITPR1 (ENSCGOG00000021328) ##24 ENSCGOG00000023674 bhlhe40 (ENSCGOG00000023677) #26 NAAA (ENSCGOG00000023679) arl8bb (ENSCGOG00000023683) #27 SEMA3F (ENSCGOG00000000535) camkvb (ENSCGOG00000000660) ENSCGOG00000000720 mon1a (ENSCGOG00000000725) traip (ENSCGOG00000000727) grm6b (ENSCGOG00000000769) ##29 comtb (ENSCGOG00000000932) SRPK3 (ENSCGOG00000000936) ccdc120b (ENSCGOG00000000963) ENSCGOG00000000965 Pike perch MODERN SPECIES 11 ppp4r2b (ENSSLUG00000010404) #10 gxylt2 (ENSSLUG00000010399) #9 shq1 (ENSSLUG00000010395) #7 rybpa (ENSSLUG00000010391) prok2 (ENSSLUG00000010387) gpr27 (ENSSLUG00000010385) EIF4E3 (ENSSLUG00000010383) foxp1b (ENSSLUG00000010380) zgc:113054 (ENSSLUG00000010375) mitfa (ENSSLUG00000010357) FRMD4B (ENSSLUG00000010314) arl6ip5a (ENSSLUG00000010291) trnt1 (ENSSLUG00000010274) #19 ENSSLUG00000010265 ##35 lrrn1 (ENSSLUG00000010263) #21 setmar (ENSSLUG00000010262) #22 ITPR1 (ENSSLUG00000007574) ##24 bhlhe40 (ENSSLUG00000007397) #26 NAAA (ENSSLUG00000007391) arl8bb (ENSSLUG00000007380) #27 SEMA3F (ENSSLUG00000005295) camkvb (ENSSLUG00000005084) ENSSLUG00000022410 mon1a (ENSSLUG00000022403) traip (ENSSLUG00000022387) grm6b (ENSSLUG00000022374) ##29 comtb (ENSSLUG00000022361) SRPK3 (ENSSLUG00000022192) ccdc120b (ENSSLUG00000022153) mbd1b (ENSSLUG00000022140) CXXC1 (ENSSLUG00000022049) Eupecaria_C ANCESTRAL SPECIES ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 European seabass MODERN SPECIES 10 gxylt2 (ENSDLAG00005024140) #9 shq1 (ENSDLAG00005029441) #7 RYBP (ENSDLAG00005024156) prok2 (ENSDLAG00005024161) EIF4E3 (ENSDLAG00005027715) gpr27 (ENSDLAG00005024164) foxp1b (ENSDLAG00005024201) ENSDLAG00005024437 zgc:113054 (ENSDLAG00005024440) ENSDLAG00005028768 mitfa (ENSDLAG00005024449) FRMD4B (ENSDLAG00005024483) arl6ip5a (ENSDLAG00005024563) trnt1 (ENSDLAG00005026509) #19 LRRN1 (ENSDLAG00005032471) #21 setmar (ENSDLAG00005032118) #22 ITPR1 (ENSDLAG00005024685) ##24 bhlhe40 (ENSDLAG00005025285) #26 ENSDLAG00005025286 ARL8B (ENSDLAG00005034963) #27 ENSDLAG00005025304 CAMKV (ENSDLAG00005025437) ENSDLAG00005025454 traip (ENSDLAG00005025462) grm6b (ENSDLAG00005025480) ##29 ENSDLAG00005025559 ccdc120b (ENSDLAG00005025677) mbd1b (ENSDLAG00005025679) ENSDLAG00005025682 tfe3b (ENSDLAG00005025703) gnl3l (ENSDLAG00005025705) Large yellow croaker MODERN SPECIES pde6a (ENSLCRG00005020486) SLC26A2 (ENSLCRG00005022159) HTR4 (ENSLCRG00005022161) lman2 (ENSLCRG00005022165) SLITRK4 (ENSLCRG00005022181) IQSEC1 (ENSLCRG00005022191) acad9 (ENSLCRG00005022380) ENSLCRG00005022410 EFCC1 (ENSLCRG00005022411) CFAP57 (ENSLCRG00005022412) nuf2 (ENSLCRG00005022415) FRMD4B (ENSLCRG00005022417) arl6ip5a (ENSLCRG00005022419) trnt1 (ENSLCRG00005022420) #19 ENSLCRG00005022421 ##35 setmar (ENSLCRG00005022422) #22 ITPR1 (ENSLCRG00005022437) ##24 bhlhe40 (ENSLCRG00005022605) #26 NAAA (ENSLCRG00005022608) ENSLCRG00005022610 arl8bb (ENSLCRG00005022612) #27 ENSLCRG00005022615 SEMA3F (ENSLCRG00005022633) camkvb (ENSLCRG00005022967) ENSLCRG00005022968 mon1a (ENSLCRG00005022969) traip (ENSLCRG00005022970) grm6b (ENSLCRG00005022971) ##29 comtb (ENSLCRG00005023001) SRPK3 (ENSLCRG00005000084) ccdc120b (ENSLCRG00005000159) Gilthead seabream MODERN SPECIES 20 gxylt2 (ENSSAUG00010020993) #9 shq1 (ENSSAUG00010020992) #7 rybpa (ENSSAUG00010020990) prok2 (ENSSAUG00010020989) gpr27 (ENSSAUG00010020987) EIF4E3 (ENSSAUG00010020986) foxp1b (ENSSAUG00010020403) ENSSAUG00010020379 zgc:113054 (ENSSAUG00010020378) mitfa (ENSSAUG00010020177) FRMD4B (ENSSAUG00010020175) arl6ip5a (ENSSAUG00010020174) trnt1 (ENSSAUG00010020172) #19 ENSSAUG00010020169 ##35 lrrn1 (ENSSAUG00010020168) #21 setmar (ENSSAUG00010020167) #22 ITPR1 (ENSSAUG00010018947) ##24 bhlhe40 (ENSSAUG00010018934) #26 ENSSAUG00010018932 arl8bb (ENSSAUG00010018930) #27 SEMA3F (ENSSAUG00010017498) camkvb (ENSSAUG00010017420) ENSSAUG00010017412 mon1a (ENSSAUG00010017406) traip (ENSSAUG00010017395) grm6b (ENSSAUG00010017188) ##29 comtb (ENSSAUG00010017170) SRPK3 (ENSSAUG00010014567) ccdc120b (ENSSAUG00010014546) mbd1b (ENSSAUG00010014539) cxxc1b (ENSSAUG00010014492) Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000158065 #9 ENSGT00940000162859.o #10 ENSGT00950000183062.a.a.a #11 ENSGT00940000155198.A ##17 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00940000169850 ENSGT00390000002635 ENSGT00940000156091.b ENSGT00390000011581.c ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Fugu MODERN SPECIES 10 ENSTRUG00000009592 ppp4r2b (ENSTRUG00000009646) #10 pdzrn3b (ENSTRUG00000009749) #11 ENSTRUG00000009896 ##17 ENSTRUG00000010466 ENSTRUG00000011022 cntn4 (ENSTRUG00000011158) ENSTRUG00000015256 cdk5rap1 (ENSTRUG00000015201) ENSTRUG00000022153 rpn2 (ENSTRUG00000014997) mybl2b (ENSTRUG00000021040) ift52 (ENSTRUG00000014953) ENSTRUG00000027705 lrrn1 (ENSTRUG00000014946) #21 setmar (ENSTRUG00000021227) #22 ITPR1 (ENSTRUG00000023819) ##24 bhlhe40 (ENSTRUG00000020385) #26 NAAA (ENSTRUG00000014493) arl8bb (ENSTRUG00000011496) #27 SEMA3F (ENSTRUG00000014242) camkvb (ENSTRUG00000014152) ENSTRUG00000013975 mon1a (ENSTRUG00000013941) traip (ENSTRUG00000013872) grm6b (ENSTRUG00000013670) ##29 comtb (ENSTRUG00000013666) SRPK3 (ENSTRUG00000029636) ccdc120b (ENSTRUG00000013456) mbd1b (ENSTRUG00000013422) cxxc1b (ENSTRUG00000013293) Ovalentaria ANCESTRAL SPECIES 2 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000181580 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000181580 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a Pomacentridae ANCESTRAL SPECIES 33 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000181580 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h.c ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Pomacentridae_A ANCESTRAL SPECIES 2 ENSGT00940000162859.o #10 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000181580 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h.c ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Amphiprion ANCESTRAL SPECIES 38 ENSGT00940000162859.o #10 ENSGT00940000158065 #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000181580 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000163250.B.b.a.a ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h.c ENSGT00940000154102.b.a.a Orange clownfish MODERN SPECIES 20 ppp4r2b (ENSAPEG00000021643) #10 gxylt2 (ENSAPEG00000021661) #9 shq1 (ENSAPEG00000021686) #7 rybpa (ENSAPEG00000021704) prok2 (ENSAPEG00000021745) gpr27 (ENSAPEG00000021757) EIF4E3 (ENSAPEG00000021766) foxp1b (ENSAPEG00000021804) zgc:113054 (ENSAPEG00000021963) mitfa (ENSAPEG00000022061) FRMD4B (ENSAPEG00000022527) arl6ip5a (ENSAPEG00000022602) trnt1 (ENSAPEG00000022627) #19 ENSAPEG00000022640 ##35 lrrn1 (ENSAPEG00000022732) #21 setmar (ENSAPEG00000022737) #22 ITPR1 (ENSAPEG00000022750) ##24 ENSAPEG00000022812 bhlhe40 (ENSAPEG00000022818) #26 ENSAPEG00000022832 ENSAPEG00000022852 arl8bb (ENSAPEG00000022867) #27 SEMA3F (ENSAPEG00000022941) camkvb (ENSAPEG00000022969) ENSAPEG00000022994 mon1a (ENSAPEG00000023054) traip (ENSAPEG00000023069) grm6b (ENSAPEG00000023124) ##29 comtb (ENSAPEG00000023151) SRPK3 (ENSAPEG00000023166) ccdc120b (ENSAPEG00000023200) Clown anemonefish MODERN SPECIES 1008 lrrn1 (ENSAOCG00000024471) #21 setmar (ENSAOCG00000024469) #22 ITPR1 (ENSAOCG00000024461) ##24 ENSAOCG00000024439 bhlhe40 (ENSAOCG00000001778) #26 NAAA (ENSAOCG00000024424) ENSAOCG00000024421 arl8bb (ENSAOCG00000024419) #27 SEMA3F (ENSAOCG00000024410) Spiny chromis MODERN SPECIES 5 ppp4r2b (ENSAPOG00000014386) #10 gxylt2 (ENSAPOG00000014376) #9 shq1 (ENSAPOG00000000397) #7 rybpa (ENSAPOG00000014342) prok2 (ENSAPOG00000014310) gpr27 (ENSAPOG00000014287) EIF4E3 (ENSAPOG00000014276) foxp1b (ENSAPOG00000014209) zgc:113054 (ENSAPOG00000013829) mitfa (ENSAPOG00000013777) FRMD4B (ENSAPOG00000013741) arl6ip5a (ENSAPOG00000013701) trnt1 (ENSAPOG00000013687) #19 ENSAPOG00000013653 ##35 lrrn1 (ENSAPOG00000013646) #21 setmar (ENSAPOG00000013638) #22 ITPR1 (ENSAPOG00000013619) ##24 bhlhe40 (ENSAPOG00000013386) #26 NAAA (ENSAPOG00000013354) arl8bb (ENSAPOG00000013328) #27 SEMA3F (ENSAPOG00000013275) camkvb (ENSAPOG00000013178) ENSAPOG00000013161 mon1a (ENSAPOG00000000350) traip (ENSAPOG00000013037) grm6b (ENSAPOG00000012948) ##29 comtb (ENSAPOG00000012877) SRPK3 (ENSAPOG00000012864) ccdc120b (ENSAPOG00000012838) mbd1b (ENSAPOG00000012810) cxxc1b (ENSAPOG00000012779) Bicolor damselfish MODERN SPECIES 386 prok2 (ENSSPAG00000021249) gpr27 (ENSSPAG00000021244) EIF4E3 (ENSSPAG00000021234) foxp1b (ENSSPAG00000021219) zgc:113054 (ENSSPAG00000021191) ENSSPAG00000021184 mitfa (ENSSPAG00000021146) FRMD4B (ENSSPAG00000021053) arl6ip5a (ENSSPAG00000021027) trnt1 (ENSSPAG00000021005) #19 ENSSPAG00000020992 ##35 lrrn1 (ENSSPAG00000020983) #21 setmar (ENSSPAG00000020978) #22 ITPR1 (ENSSPAG00000020866) ##24 bhlhe40 (ENSSPAG00000020842) #26 NAAA (ENSSPAG00000020825) arl8bb (ENSSPAG00000020792) #27 Cichlidae ANCESTRAL SPECIES 1 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Haplochromini ANCESTRAL SPECIES 1 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Haplochromini_A ANCESTRAL SPECIES ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000179368 ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a P. nyererei MODERN SPECIES 316 gxylt2 (ENSPNYG00000003893) #9 shq1 (ENSPNYG00000003878) #7 rybpa (ENSPNYG00000003852) prok2 (ENSPNYG00000003818) gpr27 (ENSPNYG00000003739) EIF4E3 (ENSPNYG00000003711) foxp1b (ENSPNYG00000003448) mdfic2 (ENSPNYG00000003404) zgc:113054 (ENSPNYG00000003372) mitfa (ENSPNYG00000003348) FRMD4B (ENSPNYG00000003194) arl6ip5a (ENSPNYG00000003159) trnt1 (ENSPNYG00000003120) #19 ENSPNYG00000003083 ##35 lrrn1 (ENSPNYG00000003065) #21 setmar (ENSPNYG00000003058) #22 ITPR1 (ENSPNYG00000002900) ##24 bhlhe40 (ENSPNYG00000002765) #26 Haplochromini_B ANCESTRAL SPECIES ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000179368 ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Zebra mbuna MODERN SPECIES 1108 gxylt2 (ENSMZEG00005008602) #9 shq1 (ENSMZEG00005008649) #7 rybpa (ENSMZEG00005008698) prok2 (ENSMZEG00005008722) gpr27 (ENSMZEG00005008748) EIF4E3 (ENSMZEG00005008767) foxp1b (ENSMZEG00005008804) mdfic2 (ENSMZEG00005008892) zgc:113054 (ENSMZEG00005008911) mitfa (ENSMZEG00005008959) FRMD4B (ENSMZEG00005009091) arl6ip5a (ENSMZEG00005009134) trnt1 (ENSMZEG00005009141) #19 ENSMZEG00005009157 ##35 lrrn1 (ENSMZEG00005009199) #21 setmar (ENSMZEG00005009204) #22 ITPR1 (ENSMZEG00005009223) ##24 bhlhe40 (ENSMZEG00005009312) #26 ENSMZEG00005009336 ENSMZEG00005009383 ENSMZEG00005009393 ENSMZEG00005009403 ENSMZEG00005009430 chchd4a (ENSMZEG00005009465) SEC61A1 (ENSMZEG00005009480) ENSMZEG00005009503 ENSMZEG00005009517 ENSMZEG00005009526 ENSMZEG00005009538 ENSMZEG00005009568 ZMYND8 (ENSMZEG00005009629) Eastern happy MODERN SPECIES 17 rybpa (ENSACLG00000023062) prok2 (ENSACLG00000023039) gpr27 (ENSACLG00000023012) EIF4E3 (ENSACLG00000022985) foxp1b (ENSACLG00000022616) mdfic2 (ENSACLG00000022587) zgc:113054 (ENSACLG00000022547) ENSACLG00000022536 mitfa (ENSACLG00000022427) FRMD4B (ENSACLG00000022299) arl6ip5a (ENSACLG00000022278) trnt1 (ENSACLG00000022227) #19 ENSACLG00000022206 ##35 ENSACLG00000022197 lrrn1 (ENSACLG00000022186) #21 setmar (ENSACLG00000022175) #22 ITPR1 (ENSACLG00000021949) ##24 bhlhe40 (ENSACLG00000021923) #26 ENSACLG00000021909 arl8bb (ENSACLG00000021872) #27 ENSACLG00000021860 SEMA3F (ENSACLG00000021730) ENSACLG00000021691 camkvb (ENSACLG00000021669) ENSACLG00000021639 mon1a (ENSACLG00000021606) traip (ENSACLG00000021544) grm6b (ENSACLG00000021488) ##29 comtb (ENSACLG00000021475) SRPK3 (ENSACLG00000021452) ccdc120b (ENSACLG00000021415) Burton s mouthbrooder MODERN SPECIES 819 mitfa (ENSHBUG00000002744) FRMD4B (ENSHBUG00000002761) arl6ip5a (ENSHBUG00000002781) trnt1 (ENSHBUG00000002797) #19 ENSHBUG00000002807 ##35 lrrn1 (ENSHBUG00000002813) #21 setmar (ENSHBUG00000002829) #22 ITPR1 (ENSHBUG00000002972) ##24 bhlhe40 (ENSHBUG00000003130) #26 Lyretail cichlid MODERN SPECIES 296 ENSNBRG00000024008 shq1 (ENSNBRG00000024004) #7 rybpa (ENSNBRG00000023999) prok2 (ENSNBRG00000023996) gpr27 (ENSNBRG00000023989) EIF4E3 (ENSNBRG00000023984) foxp1b (ENSNBRG00000023949) zgc:113054 (ENSNBRG00000023930) ENSNBRG00000023889 mitfa (ENSNBRG00000023738) FRMD4B (ENSNBRG00000023651) arl6ip5a (ENSNBRG00000023616) trnt1 (ENSNBRG00000023606) #19 ENSNBRG00000023604 ##35 lrrn1 (ENSNBRG00000023596) #21 setmar (ENSNBRG00000023590) #22 ITPR1 (ENSNBRG00000023567) ##24 BHLHE40 (ENSNBRG00000023554) #26 ENSNBRG00000023549 arl8bb (ENSNBRG00000023542) #27 SEMA3F (ENSNBRG00000023532) camkvb (ENSNBRG00000023513) ENSNBRG00000023505 traip (ENSNBRG00000023496) grm6b (ENSNBRG00000023489) ##29 comtb (ENSNBRG00000023483) ENSNBRG00000023479 ccdc120b (ENSNBRG00000023464) cxxc1b (ENSNBRG00000023408) tfe3b (ENSNBRG00000023362) gnl3l (ENSNBRG00000023334) Nile tilapia MODERN SPECIES 17 rybpa (ENSONIG00000020265) prok2 (ENSONIG00000030565) gpr27 (ENSONIG00000040990) EIF4E3 (ENSONIG00000020266) foxp1b (ENSONIG00000020267) mdfic2 (ENSONIG00000035668) zgc:113054 (ENSONIG00000020268) ddx4 (ENSONIG00000030953) ENSONIG00000041875 mitfa (ENSONIG00000020270) FRMD4B (ENSONIG00000020271) arl6ip5a (ENSONIG00000029243) trnt1 (ENSONIG00000020273) #19 ENSONIG00000020274 ##35 lrrn1 (ENSONIG00000020810) #21 setmar (ENSONIG00000020275) #22 ITPR1 (ENSONIG00000020276) ##24 bhlhe40 (ENSONIG00000020277) #26 NAAA (ENSONIG00000020278) arl8bb (ENSONIG00000020279) #27 ENSONIG00000028560 SEMA3F (ENSONIG00000020280) camkvb (ENSONIG00000036268) ENSONIG00000020282 mon1a (ENSONIG00000020283) traip (ENSONIG00000020284) grm6b (ENSONIG00000020285) ##29 comtb (ENSONIG00000020286) SRPK3 (ENSONIG00000020287) ccdc120b (ENSONIG00000020288) cxxc1b (ENSONIG00000020290) Midas cichlid MODERN SPECIES 1043 setmar (ENSACIG00000009270) #22 ITPR1 (ENSACIG00000009297) ##24 ENSACIG00000009395 ENSACIG00000009416 ##24 bhlhe40 (ENSACIG00000009498) #26 NAAA (ENSACIG00000009524) arl8bb (ENSACIG00000009595) #27 SEMA3F (ENSACIG00000009744) camkvb (ENSACIG00000009801) MST1R (ENSACIG00000009876) mon1a (ENSACIG00000009986) traip (ENSACIG00000010020) grm6b (ENSACIG00000010172) ##29 comtb (ENSACIG00000010204) SRPK3 (ENSACIG00000010338) ccdc120b (ENSACIG00000010542) Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000177280 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Aplocheiloidei ANCESTRAL SPECIES 76 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Mangrove rivulus MODERN SPECIES 139 lrrn1 (ENSKMAG00000020176) #21 setmar (ENSKMAG00000020186) #22 ITPR1 (ENSKMAG00000020220) ##24 bhlhe40 (ENSKMAG00000020298) #26 ENSKMAG00000020310 arl8bb (ENSKMAG00000020329) #27 SEMA3F (ENSKMAG00000020412) camkvb (ENSKMAG00000020494) ENSKMAG00000020521 mon1a (ENSKMAG00000020581) traip (ENSKMAG00000020606) grm6b (ENSKMAG00000020636) ##29 comtb (ENSKMAG00000020662) ENSKMAG00000020685 SRPK3 (ENSKMAG00000020698) ccdc120b (ENSKMAG00000020721) mbd1b (ENSKMAG00000020760) Turquoise killifish MODERN SPECIES 1619 SSU72 (ENSNFUG00015006538) ATAD3B (ENSNFUG00015006550) MRPL20 (ENSNFUG00015006681) Nfu_g_1_021485 (ENSNFUG00015006689) MFAP2 (ENSNFUG00015006731) ENSNFUG00015006738 CROCC (ENSNFUG00015006754) NECAP2 (ENSNFUG00015006789) SZRD1 (ENSNFUG00015006793) ENSNFUG00015006796 CAMKVB (ENSNFUG00015006802) ENSNFUG00015006856 SEMA3F (ENSNFUG00015006883) ARL8B (ENSNFUG00015006963) #27 NAAA (ENSNFUG00015006976) SETMAR (ENSNFUG00015006981) #22 ENSNFUG00015007193 BHLHE40 (ENSNFUG00015007198) #26 ENSNFUG00015007201 ENSNFUG00015007205 ENSNFUG00015007209 ENSNFUG00015007210 LRRN1 (ENSNFUG00015007213) #21 ENSNFUG00015007215 ##35 TRNT1 (ENSNFUG00015007219) #19 ARL6IP5A (ENSNFUG00015007225) FRMD4B (ENSNFUG00015007246) ENSNFUG00015007330 mitfa (ENSNFUG00015007344) zgc:113054 (ENSNFUG00015007370) foxp1b (ENSNFUG00015007381) Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000178117 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00940000175464 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A.k ENSGT00530000063548.A.l ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a Poeciliinae ANCESTRAL SPECIES 4 ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00940000175464 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A.k ENSGT00530000063548.A.l ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT01020000230394.e.a.a.b.a.a.b.a.a ENSGT00740000115534.b ENSGT01030000234623.a.a.a.a.a ENSGT00390000012914.i.a ENSGT00390000004215.a.b.a ENSGT00940000165995 ENSGT00940000157446 ENSGT00390000018852 Poecilia ANCESTRAL SPECIES 20 ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00390000007696 ENSGT00940000165164.b.j ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00940000175464 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A.k ENSGT00530000063548.A.l ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT01020000230394.e.a.a.b.a.a.b.a.a ENSGT00740000115534.b ENSGT01030000234623.a.a.a.a.a ENSGT00390000012914.i.a ENSGT00390000004215.a.b.a ENSGT00940000165995 ENSGT00940000157446 ENSGT00390000018852 ENSGT00940000159659.d.b NAME_6 ANCESTRAL SPECIES 141 ENSGT00940000157877.b.h ENSGT00940000155317.a.a ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00390000007696 ENSGT00940000165164.b.j ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A.k ENSGT00530000063548.A.l ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT01020000230394.e.a.a.b.a.a.b.a.a ENSGT00740000115534.b ENSGT01030000234623.a.a.a.a.a ENSGT00390000012914.i.a ENSGT00390000004215.a.b.a ENSGT00940000165995 ENSGT00940000157446 ENSGT00390000018852 ENSGT00940000159659.d.b Sailfin molly MODERN SPECIES 1818 lrrn1 (ENSPLAG00000014058) #21 setmar (ENSPLAG00000014064) #22 ENSPLAG00000014097 ##24 Amazon molly MODERN SPECIES 430 comtb (ENSPFOG00000007504) grm6b (ENSPFOG00000007313) ##29 traip (ENSPFOG00000007180) ENSPFOG00000007170 mon1a (ENSPFOG00000007130) ENSPFOG00000006925 camkvb (ENSPFOG00000006783) mitfa (ENSPFOG00000006677) FRMD4B (ENSPFOG00000006321) arl6ip5a (ENSPFOG00000006253) arl6ip5a (ENSPFOG00000006251) trnt1 (ENSPFOG00000006194) #19 ENSPFOG00000006189 ##35 ENSPFOG00000006181 lrrn1 (ENSPFOG00000020409) #21 setmar (ENSPFOG00000006180) #22 ITPR1 (ENSPFOG00000004491) ##24 bhlhe40 (ENSPFOG00000004275) #26 ENSPFOG00000004036 arl8bb (ENSPFOG00000003916) #27 SEMA3F (ENSPFOG00000002849) ENSPFOG00000001682 Guppy MODERN SPECIES 159 setmar (ENSPREG00000014158) #22 Platyfish MODERN SPECIES 12 ENSXMAG00000002137 ENSXMAG00000002143 grm6b (ENSXMAG00000002147) ##29 traip (ENSXMAG00000002153) mon1a (ENSXMAG00000002162) ENSXMAG00000002163 camkvb (ENSXMAG00000002182) mitfa (ENSXMAG00000002200) ENSXMAG00000002210 arl6ip5a (ENSXMAG00000002223) ENSXMAG00000002226 trnt1 (ENSXMAG00000002227) #19 ENSXMAG00000027163 ##35 ENSXMAG00000028634 lrrn1 (ENSXMAG00000020066) #21 setmar (ENSXMAG00000029083) #22 ITPR1 (ENSXMAG00000008118) ##24 ENSXMAG00000021673 bhlhe40 (ENSXMAG00000025515) #26 ENSXMAG00000008105 ENSXMAG00000024098 arl8bb (ENSXMAG00000008092) #27 SEMA3F (ENSXMAG00000008023) ENSXMAG00000007918 ENSXMAG00000024152 ENSXMAG00000022161 ENSXMAG00000021002 tp53rk (ENSXMAG00000023174) nuf2 (ENSXMAG00000025007) ENSXMAG00000023455 ENSXMAG00000022472 NAME_4 ANCESTRAL SPECIES 63 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00940000175464 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00530000063548.A.k ENSGT00530000063548.A.l ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Mummichog MODERN SPECIES 313 prok2 (ENSFHEG00000017583) gpr27 (ENSFHEG00000017617) EIF4E3 (ENSFHEG00000017632) foxp1b (ENSFHEG00000017865) zgc:113054 (ENSFHEG00000017918) ENSFHEG00000017933 mitfa (ENSFHEG00000019131) ENSFHEG00000019182 FRMD4B (ENSFHEG00000019218) arl6ip5a (ENSFHEG00000019240) ENSFHEG00000019257 trnt1 (ENSFHEG00000019294) #19 ENSFHEG00000019322 ##35 ENSFHEG00000019332 lrrn1 (ENSFHEG00000019336) #21 setmar (ENSFHEG00000019347) #22 ITPR1 (ENSFHEG00000019522) ##24 bhlhe40 (ENSFHEG00000019542) #26 NAAA (ENSFHEG00000019547) ENSFHEG00000019555 arl8bb (ENSFHEG00000019579) #27 ENSFHEG00000019608 SEMA3F (ENSFHEG00000019657) camkvb (ENSFHEG00000019743) ENSFHEG00000019818 mon1a (ENSFHEG00000019845) traip (ENSFHEG00000019960) grm6b (ENSFHEG00000019995) ##29 comtb (ENSFHEG00000020002) ENSFHEG00000020017 ccdc120b (ENSFHEG00000020101) Sheepshead minnow MODERN SPECIES 163 gpr27 (ENSCVAG00000020011) ENSCVAG00000020009 EIF4E3 (ENSCVAG00000020000) foxp1b (ENSCVAG00000019977) zgc:113054 (ENSCVAG00000019960) ENSCVAG00000019895 mitfa (ENSCVAG00000019875) FRMD4B (ENSCVAG00000019832) arl6ip5a (ENSCVAG00000019799) ENSCVAG00000019782 trnt1 (ENSCVAG00000019770) #19 ENSCVAG00000019761 ##35 ENSCVAG00000019734 ENSCVAG00000019729 lrrn1 (ENSCVAG00000000510) #21 setmar (ENSCVAG00000000509) #22 ITPR1 (ENSCVAG00000019702) ##24 ENSCVAG00000019534 bhlhe40 (ENSCVAG00000019523) #26 ENSCVAG00000019514 Oryzias ANCESTRAL SPECIES 1 ENSGT00940000158759 ENSGT00950000182939.b.a.a ENSGT00940000165705 ENSGT00950000183042.a.a ENSGT00940000166776.d ENSGT00940000159482 ENSGT00530000063320.A.i ENSGT00940000158900 ENSGT00940000166195 ENSGT00940000153414.B ENSGT00940000156266 ENSGT00940000158624 ENSGT00940000158725 ENSGT00390000003084 ENSGT00530000064721 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a Oryzias_b ANCESTRAL SPECIES 3 ENSGT00940000158759 ENSGT00950000182939.b.a.a ENSGT00940000165705 ENSGT00950000183042.a.a ENSGT00940000166776.d ENSGT00940000159482 ENSGT00530000063320.A.i ENSGT00940000158900 ENSGT00940000166195 ENSGT00940000153414.B ENSGT00940000156266 ENSGT00940000158624 ENSGT00940000158725 ENSGT00390000003084 ENSGT00530000064721 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b ENSGT00940000177309 ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000156915.f.b ENSGT00940000156308.d ENSGT00940000156047.a Indian medaka MODERN SPECIES 8 zbtb22b (ENSOMEG00000001065) kifc1 (ENSOMEG00000001064) znf384a (ENSOMEG00000001063) FLOT1 (ENSOMEG00000001061) ENSOMEG00000001060 ENSOMEG00000001058 ENSOMEG00000001057 ENSOMEG00000001055 ENSOMEG00000001054 nucks1a (ENSOMEG00000001053) ENSOMEG00000023838 cldn19 (ENSOMEG00000023840) P3H1 (ENSOMEG00000023842) zgc:112255 (ENSOMEG00000023844) ap5b1 (ENSOMEG00000023845) setmar (ENSOMEG00000023847) #22 ITPR1 (ENSOMEG00000023848) ##24 ENSOMEG00000023852 bhlhe40 (ENSOMEG00000023854) #26 ENSOMEG00000023855 arl8bb (ENSOMEG00000023857) #27 ENSOMEG00000023858 PMEPA1 (ENSOMEG00000023859) pck1 (ENSOMEG00000023861) ENSOMEG00000023864 ENSOMEG00000023865 ENSOMEG00000023866 ENSOMEG00000023867 ahcy (ENSOMEG00000023869) IQSEC1 (ENSOMEG00000023875) ENSOMEG00000023879 Javanese ricefish MODERN SPECIES 19 ENSOJAG00000019277 slc41a1 (ENSOJAG00000019098) ENSOJAG00000019072 CDK18 (ENSOJAG00000017842) mfsd4aa (ENSOJAG00000017730) elk4 (ENSOJAG00000017722) ENSOJAG00000017714 nucks1a (ENSOJAG00000017702) ENSOJAG00000017693 ENSOJAG00000017678 ENSOJAG00000017462 cldn19 (ENSOJAG00000017442) P3H1 (ENSOJAG00000017248) zgc:112255 (ENSOJAG00000017233) ap5b1 (ENSOJAG00000017227) setmar (ENSOJAG00000017222) #22 ENSOJAG00000017208 bhlhe40 (ENSOJAG00000016468) #26 NAAA (ENSOJAG00000016452) arl8bb (ENSOJAG00000016413) #27 ENSOJAG00000016217 PMEPA1 (ENSOJAG00000016187) pck1 (ENSOJAG00000016120) ENSOJAG00000016058 ENSOJAG00000016043 ENSOJAG00000016035 ENSOJAG00000016026 ahcy (ENSOJAG00000015814) IQSEC1 (ENSOJAG00000014151) hdac11 (ENSOJAG00000013868) FBLN2 (ENSOJAG00000013545) Oryzias_a ANCESTRAL SPECIES 5 ENSGT00940000158759 ENSGT00950000182939.b.a.a ENSGT00940000165705 ENSGT00950000183042.a.a ENSGT00940000166776.d ENSGT00940000159482 ENSGT00530000063320.A.i ENSGT00940000158900 ENSGT00940000166195 ENSGT00940000153414.B ENSGT00940000156266 ENSGT00940000158624 ENSGT00940000158725 ENSGT00390000003084 ENSGT00530000064721 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000177280 ENSGT00940000158384.d #26 ENSGT00530000063548.A ENSGT00940000154861.n.a #27 ENSGT00940000161847.b.a.e.a.a ENSGT00390000000724.c.a ENSGT00390000001912.f ENSGT00950000183127.c.b.d.a.a.a.b.e ENSGT00940000154663.a.b ENSGT00950000182981.a ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a ENSGT00940000158523.c.b Japanese Medaka HdrR MODERN SPECIES 19 etnk2 (ENSORLG00000012080) ENSORLG00000023213 slc41a1 (ENSORLG00000023129) ENSORLG00000012126 CDK18 (ENSORLG00000012176) mfsd4aa (ENSORLG00000012208) elk4 (ENSORLG00000012230) ENSORLG00000012237 ENSORLG00000024522 nucks1a (ENSORLG00000012276) ENSORLG00000012405 cldn19 (ENSORLG00000012418) P3H1 (ENSORLG00000012560) zgc:112255 (ENSORLG00000012573) ap5b1 (ENSORLG00000012579) setmar (ENSORLG00000028716) #22 ITPR1 (ENSORLG00000012718) ##24 ENSORLG00000030408 dec1a (ENSORLG00000022966) #26 ENSORLG00000012763 ARL8B (ENSORLG00000012782) #27 ENSORLG00000012794 pmepa1 (ENSORLG00000012800) ENSORLG00000012826 ENSORLG00000012822 ENSORLG00000012843 ahcy (ENSORLG00000012859) IQSEC1 (ENSORLG00000012890) ENSORLG00000024878 hdac11 (ENSORLG00000012909) FBLN2 (ENSORLG00000012935) Chinese medaka MODERN SPECIES 509 sox13 (ENSOSIG00000008379) ENSOSIG00000008373 etnk2 (ENSOSIG00000008371) ENSOSIG00000008370 slc41a1 (ENSOSIG00000007175) ENSOSIG00000007162 CDK18 (ENSOSIG00000003924) mfsd4aa (ENSOSIG00000003731) elk4 (ENSOSIG00000020211) nucks1a (ENSOSIG00000020208) ENSOSIG00000020205 cldn19 (ENSOSIG00000020199) P3H1 (ENSOSIG00000020192) zgc:112255 (ENSOSIG00000020187) ap5b1 (ENSOSIG00000020185) setmar (ENSOSIG00000020182) #22 ENSOSIG00000020179 bhlhe40 (ENSOSIG00000020159) #26 ENSOSIG00000020158 arl8bb (ENSOSIG00000020153) #27 ENSOSIG00000020148 pmepa1 (ENSOSIG00000020145) pck1 (ENSOSIG00000020142) ENSOSIG00000019652 ENSOSIG00000019581 ahcy (ENSOSIG00000019368) IQSEC1 (ENSOSIG00000019210) hdac11 (ENSOSIG00000019171) FBLN2 (ENSOSIG00000018954) Tiger tail seahorse MODERN SPECIES 280 ENSHCOG00000011365 ##17 pdzrn3b (ENSHCOG00000010837) #11 ppp4r2b (ENSHCOG00000010808) #10 gxylt2 (ENSHCOG00000010804) #9 shq1 (ENSHCOG00000010799) #7 RYBP (ENSHCOG00000010777) prok2 (ENSHCOG00000010773) EIF4E3 (ENSHCOG00000010757) ENSHCOG00000010745 foxp1b (ENSHCOG00000010731) mitfa (ENSHCOG00000010705) FRMD4B (ENSHCOG00000010682) arl6ip5a (ENSHCOG00000010626) trnt1 (ENSHCOG00000010618) #19 lrrn1 (ENSHCOG00000010606) #21 setmar (ENSHCOG00000010603) #22 ENSHCOG00000010596 ##24 ITPR1 (ENSHCOG00000010574) ##24 ENSHCOG00000000326 bhlhe40 (ENSHCOG00000010486) #26 ENSHCOG00000010474 arl8bb (ENSHCOG00000010468) #27 SEMA3F (ENSHCOG00000010442) camkvb (ENSHCOG00000010400) ENSHCOG00000010321 mon1a (ENSHCOG00000010263) traip (ENSHCOG00000010255) grm6b (ENSHCOG00000010199) ##29 comtb (ENSHCOG00000010157) SRPK3 (ENSHCOG00000009982) ccdc120b (ENSHCOG00000000314) Pinecone sodierfish MODERN SPECIES 19 ppp4r2b (ENSMMDG00005009228) #10 gxylt2 (ENSMMDG00005009227) #9 shq1 (ENSMMDG00005009217) #7 rybpa (ENSMMDG00005009204) prok2 (ENSMMDG00005009188) gpr27 (ENSMMDG00005009185) EIF4E3 (ENSMMDG00005009182) foxp1b (ENSMMDG00005009108) zgc:113054 (ENSMMDG00005009107) mitfa (ENSMMDG00005009103) FRMD4B (ENSMMDG00005009095) arl6ip5a (ENSMMDG00005009086) trnt1 (ENSMMDG00005009082) #19 ENSMMDG00005009079 ##35 lrrn1 (ENSMMDG00005009074) #21 setmar (ENSMMDG00005009073) #22 ENSMMDG00005009072 ITPR1 (ENSMMDG00005009020) ##24 bhlhe40 (ENSMMDG00005009011) #26 NAAA (ENSMMDG00005009008) arl8bb (ENSMMDG00005008996) #27 SEMA3F (ENSMMDG00005008991) camkvb (ENSMMDG00005008983) ENSMMDG00005008960 mon1a (ENSMMDG00005008952) traip (ENSMMDG00005008941) grm6b (ENSMMDG00005008936) ##29 comtb (ENSMMDG00005008931) SRPK3 (ENSMMDG00005008906) ccdc120b (ENSMMDG00005008902) mbd1b (ENSMMDG00005008899) Cod MODERN SPECIES 4 ENSGMOG00000001455 akr7a3 (ENSGMOG00000001441) ENSGMOG00000001422 ENSGMOG00000001401 ENSGMOG00000035002 PPARG (ENSGMOG00000001375) syn2b (ENSGMOG00000014094) TIMP4 (ENSGMOG00000023986) tamm41 (ENSGMOG00000010587) ENSGMOG00000023751 ENSGMOG00000010454 vgll4b (ENSGMOG00000010444) ATG7 (ENSGMOG00000010427) HRH1 (ENSGMOG00000034842) LRRN1 (ENSGMOG00000020177) #21 setmar (ENSGMOG00000034115) #22 ITPR1 (ENSGMOG00000002239) ##24 bhlhe40 (ENSGMOG00000031170) #26 ENSGMOG00000002389 arl8bb (ENSGMOG00000002416) #27 ENSGMOG00000002430 camkvb (ENSGMOG00000002479) ENSGMOG00000032890 mon1a (ENSGMOG00000024519) traip (ENSGMOG00000002576) grm6b (ENSGMOG00000002607) ##29 ENSGMOG00000002636 ENSGMOG00000020337 ENSGMOG00000011937 ENSGMOG00000002647 ccdc120b (ENSGMOG00000029914) Protacanthopterygii ANCESTRAL SPECIES 24 ENSGT00390000007605 #7 ENSGT00390000013995.b.a ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865.c.b ENSGT00940000165920.b ENSGT00730000111641.b ENSGT00940000165309 ENSGT00390000004409.b ENSGT00940000156326.a.b ENSGT01020000230354.A.a.a ENSGT00390000008631.a.o.a ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a ##35 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C ##24 ENSGT00940000158384.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ##29 ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392.c ENSGT00940000157503.i.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 103 ENSGT00940000158065.f #9 ENSGT00940000177762 ENSGT00390000013995.b.a ENSGT00940000167138.a ENSGT00890000139436.A.a.b ENSGT00940000155865.c.b ENSGT00940000165920.b.c ENSGT00730000111641.b ENSGT00940000165309.e.a ENSGT00940000156326.a.b.c ENSGT01020000230354.A.a.a.d ENSGT00390000008631.a.o.a.b ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a.c ##35 ENSGT00940000157154.d.f #21 ENSGT00940000162663.c #22 ENSGT00940000155071.C.e ##24 ENSGT00940000158384.d.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a.a ENSGT00940000156468.f.d ENSGT00940000157842.b.e ENSGT00390000006665.a.a ENSGT00980000202247 ENSGT01030000234648.a.b.a.b.a.b.e ##29 ENSGT00940000155317.a.a.q.b ENSGT00940000157877.b.h.g ENSGT00940000154102.b.a.a.d ENSGT00950000183005.a.a.d ENSGT00940000166392.c.a ENSGT00940000157503.i.b.d Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00940000158065.f #9 ENSGT00940000177762 ENSGT00390000013995.b.a.ab ENSGT00940000167138.a ENSGT00890000139436.A.a.b ENSGT00940000155865.c.b ENSGT00940000165920.b.c ENSGT00730000111641.b ENSGT00940000165309.e.a ENSGT00940000156326.a.b.c ENSGT01020000230354.A.a.a.d ENSGT00390000008631.a.o.a.b ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a.c ##35 ENSGT00940000157154.d.f #21 ENSGT00940000162663.c #22 ENSGT00940000155071.C.e ##24 ENSGT00940000158384.d.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a.a ENSGT00940000156468.f.d ENSGT00940000157842.b.e ENSGT00390000006665.a.a ENSGT00980000202247 ENSGT01030000234648.a.b.a.b.a.b.e ##29 ENSGT00940000155317.a.a.q.b ENSGT00940000157877.b.h.g ENSGT00940000154102.b.a.a.d ENSGT00950000183005.a.a.d ENSGT00940000166392.c.a ENSGT00940000157503.i.b.d Salmo ANCESTRAL SPECIES 33 ENSGT00940000158065.f #9 ENSGT00940000177762 ENSGT00390000013995.b.a.ab ENSGT00940000167138.a ENSGT00890000139436.A.a.b ENSGT00940000155865.c.b ENSGT00940000165920.b.c ENSGT00730000111641.b ENSGT00940000165309.e.a ENSGT00940000156326.a.b.c ENSGT01020000230354.A.a.a.d ENSGT00390000008631.a.o.a.b ENSGT00390000009678.e #19 ENSGT01050000244882.b.c.a.a.c ##35 ENSGT00940000157154.d.f #21 ENSGT00940000162663.c #22 ENSGT00940000155071.C.e ##24 ENSGT00940000158384.d.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a.a ENSGT00940000156468.f.d ENSGT00940000157842.b.e ENSGT00390000006665.a.a ENSGT01030000234648.a.b.a.b.a.b.e ##29 ENSGT00940000155317.a.a.q.b ENSGT00940000157877.b.h.g ENSGT00940000154102.b.a.a.d ENSGT00950000183005.a.a.d ENSGT00730000111044 ENSGT00940000157503.i.b.d ENSGT00940000155877 River trout MODERN SPECIES 5 gxylt2 (ENSSTUG00000014423) #9 ENSSTUG00000014447 RYBP (ENSSTUG00000014455) prok2 (ENSSTUG00000014470) gpr27 (ENSSTUG00000014479) EIF4E3 (ENSSTUG00000014483) foxp1b (ENSSTUG00000014503) mdfic2 (ENSSTUG00000014882) zgc:113054 (ENSSTUG00000014888) mitfa (ENSSTUG00000014914) FRMD4B (ENSSTUG00000015084) arl6ip5a (ENSSTUG00000015266) trnt1 (ENSSTUG00000015279) #19 ENSSTUG00000015291 ##35 lrrn1 (ENSSTUG00000015297) #21 setmar (ENSSTUG00000015300) #22 ITPR1 (ENSSTUG00000015338) ##24 bhlhe40 (ENSSTUG00000015789) #26 arl8bb (ENSSTUG00000015812) #27 SEMA3F (ENSSTUG00000015849) camkvb (ENSSTUG00000016452) ENSSTUG00000016484 mon1a (ENSSTUG00000016521) traip (ENSSTUG00000016538) grm6b (ENSSTUG00000016561) ##29 comtb (ENSSTUG00000016606) SRPK3 (ENSSTUG00000016695) ccdc120b (ENSSTUG00000016723) ENSSTUG00000016732 mbd1b (ENSSTUG00000016736) CXXC1 (ENSSTUG00000016765) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000077990 RYBP (ENSSSAG00000112642) prok2 (ENSSSAG00000077970) gpr27 (ENSSSAG00000090342) EIF4E3 (ENSSSAG00000118265) ENSSSAG00000111237 foxp1b (ENSSSAG00000077724) mdfic2 (ENSSSAG00000077706) zgc:113054 (ENSSSAG00000077695) mitfa (ENSSSAG00000077659) FRMD4B (ENSSSAG00000077601) arl6ip5a (ENSSSAG00000077595) TRNT1 (ENSSSAG00000077584) #19 ENSSSAG00000077580 ##35 lrrn1 (ENSSSAG00000098200) #21 setmar (ENSSSAG00000077574) #22 ENSSSAG00000112671 ITPR1 (ENSSSAG00000054019) ##24 BHLH2 (ENSSSAG00000052801) #26 arl8bb (ENSSSAG00000116454) #27 ENSSSAG00000043762 camkvb (ENSSSAG00000043153) ENSSSAG00000043080 mon1a (ENSSSAG00000043049) grm6b (ENSSSAG00000093082) ##29 comtb (ENSSSAG00000042490) ENSSSAG00000036227 ccdc120b (ENSSSAG00000035547) mbd1b (ENSSSAG00000035232) ENSSSAG00000092788 ENSSSAG00000020016 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000158065.f #9 ENSGT00940000177762 ENSGT00390000013995.b.a.ab ENSGT00940000167138.a ENSGT00890000139436.A.a.b ENSGT00940000155865.c.b ENSGT00940000165920.b.c ENSGT00730000111641.b ENSGT00940000165309.e.a ENSGT00940000156326.a.b.c ENSGT01020000230354.A.a.a.d ENSGT00390000008631.a.o.a.b ENSGT00390000009678.h #19 ENSGT01050000244882.b.c.a.a.c ##35 ENSGT00940000157154.d.f #21 ENSGT00940000162663.c #22 ENSGT00940000155071.C.e ##24 ENSGT00940000158384.d.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a.a ENSGT00940000156468.f.d ENSGT00940000157842.b.e ENSGT00390000006665.a.a ENSGT00980000202247 ENSGT01030000234648.a.b.a.b.a.b.e ##29 ENSGT00940000155317.a.a.q.b ENSGT00940000157877.b.h.g ENSGT00940000154102.b.a.a.d ENSGT00950000183005.a.a.d ENSGT00940000166392.c.a ENSGT00940000157503.i.b.d Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000162859.o.f #10 ENSGT00940000158065.f #9 ENSGT00940000177762 ENSGT00390000013995.b.a.ab ENSGT00890000139436.A.a.b ENSGT00940000155865.c.b ENSGT00940000165920.b.c ENSGT00730000111641.b ENSGT00940000165309.e.a ENSGT00940000156326.a.b.c ENSGT01020000230354.A.a.a.d ENSGT00390000008631.a.o.a.b ENSGT00390000009678.h #19 ENSGT01050000244882.b.c.a.a.c ##35 ENSGT00940000157154.d.f #21 ENSGT00940000162663.c #22 ENSGT00940000155071.C.e ##24 ENSGT00940000158384.d.d #26 ENSGT00940000154861.n.a #27 ENSGT00940000156703.e.a.a ENSGT00940000156468.f.d ENSGT00940000157842.b.e ENSGT00390000006665.a.a ENSGT00980000202247 ENSGT01030000234648.a.b.a.b.a.b.e ##29 ENSGT00940000155317.a.a.q.b ENSGT00940000157877.b.h.g ENSGT00940000154102.b.a.a.d ENSGT00950000183005.a.a.d ENSGT00940000166392.c.a ENSGT00940000157503.i.b.d Chinook salmon MODERN SPECIES 11 ENSOTSG00005004235 ##17 pdzrn3b (ENSOTSG00005004234) #11 ppp4r2b (ENSOTSG00005004231) #10 gxylt2 (ENSOTSG00005004230) #9 RYBP (ENSOTSG00005004229) gpr27 (ENSOTSG00005004228) EIF4E3 (ENSOTSG00005004227) foxp1b (ENSOTSG00005002056) zgc:113054 (ENSOTSG00005002048) mitfa (ENSOTSG00005001922) FRMD4B (ENSOTSG00005001893) arl6ip5a (ENSOTSG00005001888) trnt1 (ENSOTSG00005001883) #19 ENSOTSG00005001880 ##35 lrrn1 (ENSOTSG00005001879) #21 setmar (ENSOTSG00005001878) #22 ITPR1 (ENSOTSG00005001228) ##24 bhlhe40 (ENSOTSG00005001151) #26 arl8bb (ENSOTSG00005001141) #27 SEMA3F (ENSOTSG00005000749) camkvb (ENSOTSG00005000406) MST1R (ENSOTSG00005045214) mon1a (ENSOTSG00005045213) ENSOTSG00005045212 grm6b (ENSOTSG00005045198) ##29 comtb (ENSOTSG00005045196) SRPK3 (ENSOTSG00005043456) ccdc120b (ENSOTSG00005043438) mbd1b (ENSOTSG00005043437) cxxc1b (ENSOTSG00005043374) tfe3b (ENSOTSG00005043372) Coho salmon MODERN SPECIES gxylt2 (ENSOKIG00005011018) #9 ENSOKIG00005011034 RYBP (ENSOKIG00005011042) ENSOKIG00005011059 gpr27 (ENSOKIG00005011072) EIF4E3 (ENSOKIG00005011081) foxp1b (ENSOKIG00005011174) mdfic2 (ENSOKIG00005012150) zgc:113054 (ENSOKIG00005012160) mitfa (ENSOKIG00005012208) FRMD4B (ENSOKIG00005012358) arl6ip5a (ENSOKIG00005012491) trnt1 (ENSOKIG00005012500) #19 ENSOKIG00005012512 ##35 lrrn1 (ENSOKIG00005012515) #21 setmar (ENSOKIG00005012520) #22 ITPR1 (ENSOKIG00005012584) ##24 bhlhe40 (ENSOKIG00005012956) #26 arl8bb (ENSOKIG00005012969) #27 SEMA3F (ENSOKIG00005013005) camkvb (ENSOKIG00005013204) ENSOKIG00005013243 ENSOKIG00005013248 MST1R (ENSOKIG00005013256) mon1a (ENSOKIG00005013313) ENSOKIG00005013355 grm6b (ENSOKIG00005013474) ##29 comtb (ENSOKIG00005013536) SRPK3 (ENSOKIG00005013561) ccdc120b (ENSOKIG00005013610) mbd1b (ENSOKIG00005013620) Rainbow trout MODERN SPECIES 8 prok2 (ENSOMYG00000026926) gpr27 (ENSOMYG00000026893) EIF4E3 (ENSOMYG00000026861) ENSOMYG00000026823 ENSOMYG00000068868 foxp1b (ENSOMYG00000026154) mdfic2 (ENSOMYG00000026023) zgc:113054 (ENSOMYG00000025999) mitfa (ENSOMYG00000025566) ENSOMYG00000049451 FRMD4B (ENSOMYG00000025031) arl6ip5a (ENSOMYG00000024815) trnt1 (ENSOMYG00000024790) #19 ENSOMYG00000024756 ##35 lrrn1 (ENSOMYG00000024735) #21 setmar (ENSOMYG00000024725) #22 ENSOMYG00000024717 ITPR1 (ENSOMYG00000023613) ##24 bhlhe40 (ENSOMYG00000022729) #26 arl8bb (ENSOMYG00000022701) #27 ENSOMYG00000022540 camkvb (ENSOMYG00000022384) ENSOMYG00000022319 mon1a (ENSOMYG00000022263) ENSOMYG00000075273 grm6b (ENSOMYG00000021991) ##29 comtb (ENSOMYG00000021878) ENSOMYG00000020776 ccdc120b (ENSOMYG00000020609) mbd1b (ENSOMYG00000020593) cxxc1b (ENSOMYG00000020532) Huchen MODERN SPECIES 664 mdfic2 (ENSHHUG00000017355) zgc:113054 (ENSHHUG00000017316) mitfa (ENSHHUG00000017254) FRMD4B (ENSHHUG00000017226) arl6ip5a (ENSHHUG00000017210) trnt1 (ENSHHUG00000017207) #19 ENSHHUG00000017197 ##35 lrrn1 (ENSHHUG00000017192) #21 setmar (ENSHHUG00000017189) #22 ENSHHUG00000017182 ITPR1 (ENSHHUG00000016364) ##24 Salmoninae ANCESTRAL SPECIES 8 ENSGT00940000155198.A.e ##17 ENSGT00950000183062.a.a.a.a #11 ENSGT00940000162859.o.e #10 ENSGT00940000158065.e #9 ENSGT00390000007605 #7 ENSGT00940000167138.b ENSGT00890000139436.A.a.a ENSGT00940000165920.b.d ENSGT00940000165309.e.b ENSGT00940000156326.a.b.d ENSGT01020000230354.A.a.a.c ENSGT00390000008631.a.o.a.a ENSGT01010000224106 ENSGT01050000244882.b.c.a.a.d ##35 ENSGT00940000157154.d.e #21 ENSGT00940000162663.d #22 ENSGT00940000155071.C.f ##24 ENSGT00940000158384.d.c #26 ENSGT00940000156703.e.a.b ENSGT00940000156468.f.c ENSGT00940000157842.b.f ENSGT00390000006665.a.b ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b.f ##29 ENSGT00940000155317.a.a.q.a ENSGT00940000157877.b.h.h ENSGT00940000154102.b.a.a.c ENSGT00950000183005.a.a.c ENSGT00730000111044 ENSGT00940000166392.c.b ENSGT00940000157503.i.b.c Huchen MODERN SPECIES 341 ENSHHUG00000041849 ENSHHUG00000041852 ENSHHUG00000041856 ENSHHUG00000041860 mitfa (ENSHHUG00000041864) FRMD4B (ENSHHUG00000041948) arl6ip5a (ENSHHUG00000041989) ENSHHUG00000041993 ENSHHUG00000042000 ##35 lrrn1 (ENSHHUG00000042003) #21 setmar (ENSHHUG00000042006) #22 ITPR1 (ENSHHUG00000042039) ##24 bhlhe40 (ENSHHUG00000043019) #26 SEMA3F (ENSHHUG00000043022) camkvb (ENSHHUG00000043047) Salmoninae_a ANCESTRAL SPECIES 25 ENSGT00950000183062.a.a.a.a #11 ENSGT00940000162859.o.e #10 ENSGT00940000158065.e #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a.`b ENSGT00940000167138.b ENSGT00890000139436.A.a.a ENSGT00940000165920.b.d ENSGT00940000165309.e.b ENSGT00940000156326.a.b.d ENSGT01020000230354.A.a.a.c ENSGT00390000008631.a.o.a.a ENSGT01010000224106 ENSGT01050000244882.b.c.a.a.d ##35 ENSGT00940000157154.d.e #21 ENSGT00940000162663.d #22 ENSGT00940000155071.C.f ##24 ENSGT00940000158384.d.c #26 ENSGT00940000156703.e.a.b ENSGT00940000156468.f.c ENSGT00940000157842.b.f ENSGT00390000006665.a.b ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b.f ##29 ENSGT00940000155317.a.a.q.a ENSGT00940000157877.b.h.h ENSGT00940000154102.b.a.a.c ENSGT00950000183005.a.a.c ENSGT00730000111044 ENSGT00940000166392.c.b ENSGT00940000157503.i.b.c Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00950000183062.a.a.a.a #11 ENSGT00940000162859.o.e #10 ENSGT00940000158065.e #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a.`b ENSGT00940000167138.b ENSGT00890000139436.A.a.a ENSGT00940000165920.b.d ENSGT00940000165309.e.b ENSGT00940000156326.a.b.d ENSGT01020000230354.A.a.a.c ENSGT00390000008631.a.o.a.a ENSGT01010000224106 ENSGT01050000244882.b.c.a.a.d ##35 ENSGT00940000157154.d.e #21 ENSGT00940000162663.d #22 ENSGT00940000155071.C.f ##24 ENSGT00940000158384.d.c #26 ENSGT00940000156703.e.a.b ENSGT00940000156468.f.c ENSGT00940000157842.b.f ENSGT00390000006665.a.b ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b.f ##29 ENSGT00940000155317.a.a.q.a ENSGT00940000157877.b.h.h ENSGT00940000154102.b.a.a.c ENSGT00950000183005.a.a.c ENSGT00730000111044 ENSGT00940000159667.a.f ENSGT00940000164755.A Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00950000183062.a.a.a.a #11 ENSGT00940000162859.o.e #10 ENSGT00940000158065.e #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a.`b ENSGT00940000167138.b ENSGT00890000139436.A.a.a ENSGT00940000165920.b.d ENSGT00940000165309.e.b ENSGT00940000156326.a.b.d ENSGT01020000230354.A.a.a.c ENSGT00390000008631.a.o.a.a ENSGT01010000224106 ENSGT01050000244882.b.c.a.a.d ##35 ENSGT00940000157154.d.e #21 ENSGT00940000162663.d #22 ENSGT00940000155071.C.f ##24 ENSGT00940000158384.d.c #26 ENSGT00940000156703.e.a.b ENSGT00940000156468.f.c ENSGT00940000175393 ENSGT00940000157842.b.f ENSGT00390000006665.a.b ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b.f ##29 ENSGT00940000155317.a.a.q.a ENSGT00940000157877.b.h.h ENSGT00940000154102.b.a.a.c ENSGT00950000183005.a.a.c ENSGT00730000111044 ENSGT00940000166392.c.b Chinook salmon MODERN SPECIES 31 ppp4r2b (ENSOTSG00005029431) #10 gxylt2 (ENSOTSG00005029433) #9 shq1 (ENSOTSG00005029435) #7 ENSOTSG00005029445 RYBP (ENSOTSG00005029447) prok2 (ENSOTSG00005029448) gpr27 (ENSOTSG00005029449) foxp1b (ENSOTSG00005029453) zgc:113054 (ENSOTSG00005029466) mitfa (ENSOTSG00005029470) FRMD4B (ENSOTSG00005029474) arl6ip5a (ENSOTSG00005029485) ENSOTSG00005029486 ENSOTSG00005029487 ##35 lrrn1 (ENSOTSG00005029488) #21 setmar (ENSOTSG00005029489) #22 ITPR1 (ENSOTSG00005029499) ##24 bhlhe40 (ENSOTSG00005029834) #26 SEMA3F (ENSOTSG00005029841) camkvb (ENSOTSG00005030318) ENSOTSG00005030346 ENSOTSG00005030348 MST1R (ENSOTSG00005030351) mon1a (ENSOTSG00005030356) traip (ENSOTSG00005030396) grm6b (ENSOTSG00005030440) ##29 comtb (ENSOTSG00005030442) SRPK3 (ENSOTSG00005030443) ccdc120b (ENSOTSG00005030445) mbd1b (ENSOTSG00005030447) cxxc1b (ENSOTSG00005030449) Rainbow trout MODERN SPECIES 28 ppp4r2b (ENSOMYG00000017842) #10 gxylt2 (ENSOMYG00000017886) #9 shq1 (ENSOMYG00000017934) #7 ENSOMYG00000077625 RYBP (ENSOMYG00000018018) ENSOMYG00000063847 prok2 (ENSOMYG00000018025) gpr27 (ENSOMYG00000018032) foxp1b (ENSOMYG00000018060) ENSOMYG00000018605 mitfa (ENSOMYG00000018633) FRMD4B (ENSOMYG00000018705) praf3 (ENSOMYG00000018762) ENSOMYG00000018779 ##35 lrrn1 (ENSOMYG00000018787) #21 setmar (ENSOMYG00000018797) #22 ENSOMYG00000058313 ENSOMYG00000018924 ##24 ENSOMYG00000019279 bhlhe40 (ENSOMYG00000019293) #26 ENSOMYG00000019619 camkvb (ENSOMYG00000021343) ENSOMYG00000073574 ENSOMYG00000021362 ##8 MST1R (ENSOMYG00000021410) mon1a (ENSOMYG00000021436) traip (ENSOMYG00000021463) grm6b (ENSOMYG00000021486) ##29 comtb (ENSOMYG00000021507) ENSOMYG00000021549 ccdc120b (ENSOMYG00000021563) Salmo ANCESTRAL SPECIES 6 ENSGT00940000162859.o.e #10 ENSGT00940000158065.e #9 ENSGT00390000007605 #7 ENSGT00390000013995.b.a.`b ENSGT00940000167138.b ENSGT00890000139436.A.a.a ENSGT00940000165920.b.d ENSGT00940000165309.e.b ENSGT00940000156326.a.b.d ENSGT01020000230354.A.a.a.c ENSGT00390000008631.a.o.a.a ENSGT00390000009678.f #19 ENSGT01010000224106 ENSGT01050000244882.b.c.a.a.d ##35 ENSGT00940000157154.d.e #21 ENSGT00940000162663.d #22 ENSGT00940000155071.C.f ##24 ENSGT00940000158384.d.c #26 ENSGT00940000156703.e.a.b ENSGT00940000156468.f.c ENSGT00940000157842.b.f ENSGT00390000006665.a.b ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b.f ##29 ENSGT00940000155317.a.a.q.a ENSGT00940000157877.b.h.h ENSGT00940000154102.b.a.a.c ENSGT00950000183005.a.a.c ENSGT00940000166392.c.b ENSGT00940000157503.i.b.c ENSGT01030000234549.a.a.a.b.cb.a.b.b River trout MODERN SPECIES 7 ppp4r2b (ENSSTUG00000035210) #10 gxylt2 (ENSSTUG00000035198) #9 shq1 (ENSSTUG00000035153) #7 RYBP (ENSSTUG00000035141) prok2 (ENSSTUG00000035134) gpr27 (ENSSTUG00000035129) foxp1b (ENSSTUG00000034974) zgc:113054 (ENSSTUG00000034952) mitfa (ENSSTUG00000034903) FRMD4B (ENSSTUG00000034835) arl6ip5a (ENSSTUG00000034827) ENSSTUG00000034824 ENSSTUG00000034758 ##35 lrrn1 (ENSSTUG00000034747) #21 ENSSTUG00000034740 setmar (ENSSTUG00000034728) #22 ITPR1 (ENSSTUG00000034046) ##24 bhlhe40 (ENSSTUG00000037370) #26 SEMA3F (ENSSTUG00000036160) camkvb (ENSSTUG00000036070) ENSSTUG00000036057 ##8 ENSSTUG00000035987 mon1a (ENSSTUG00000035963) traip (ENSSTUG00000035875) grm6b (ENSSTUG00000035821) ##29 comtb (ENSSTUG00000035786) ccdc120b (ENSSTUG00000035764) mbd1b (ENSSTUG00000035673) cxxc1b (ENSSTUG00000035005) tfe3b (ENSSTUG00000034951) ENSSTUG00000034912 Atlantic salmon MODERN SPECIES 14 shq1 (ENSSSAG00000077767) #7 ENSSSAG00000103273 RYBP (ENSSSAG00000105530) prok2 (ENSSSAG00000077791) gpr27 (ENSSSAG00000093272) foxp1b (ENSSSAG00000077820) ENSSSAG00000121941 zgc:113054 (ENSSSAG00000078317) mitfa (ENSSSAG00000078323) FRMD4B (ENSSSAG00000078356) arl6ip5a (ENSSSAG00000098089) trnt1 (ENSSSAG00000078413) #19 ENSSSAG00000087334 ENSSSAG00000078424 ##35 lrrn1 (ENSSSAG00000085844) #21 setmar (ENSSSAG00000078434) #22 ENSSSAG00000078769 ##24 BHLH2 (ENSSSAG00000081153) #26 ENSSSAG00000081205 camkvb (ENSSSAG00000095316) ENSSSAG00000081274 ENSSSAG00000117917 ENSSSAG00000081275 mon1a (ENSSSAG00000081282) traip (ENSSSAG00000051195) grm6b (ENSSSAG00000105405) ##29 comtb (ENSSSAG00000095832) ENSSSAG00000081305 ccdc120b (ENSSSAG00000107262) mbd1b (ENSSSAG00000081317) cxxc1b (ENSSSAG00000081321) Northern pike MODERN SPECIES 16 ppp4r2b (ENSELUG00000003437) #10 gxylt2 (ENSELUG00000003451) #9 shq1 (ENSELUG00000003476) #7 rybpa (ENSELUG00000003503) prok2 (ENSELUG00000003525) EIF4E3 (ENSELUG00000003543) foxp1b (ENSELUG00000003572) mdfic2 (ENSELUG00000003599) zgc:113054 (ENSELUG00000003610) mitfa (ENSELUG00000003651) FRMD4B (ENSELUG00000003740) praf3 (ENSELUG00000003790) trnt1 (ENSELUG00000003802) #19 ENSELUG00000028972 lrrn1 (ENSELUG00000003813) #21 setmar (ENSELUG00000003826) #22 ITPR1 (ENSELUG00000003888) ##24 bhlhe40 (ENSELUG00000001165) #26 arl8bb (ENSELUG00000003984) #27 SEMA3F (ENSELUG00000004030) camkvb (ENSELUG00000004070) ENSELUG00000004107 ENSELUG00000033830 ENSELUG00000004158 mon1a (ENSELUG00000004180) ENSELUG00000004204 grm6b (ENSELUG00000004228) ##29 comtb (ENSELUG00000004237) SRPK3 (ENSELUG00000001310) ccdc120b (ENSELUG00000004322) mbd1b (ENSELUG00000004375) Spotted gar MODERN SPECIES 671 ENSLOCG00000011200 ENSLOCG00000011194 RBSN (ENSLOCG00000011180) mrps25 (ENSLOCG00000011170) nr2c2 (ENSLOCG00000011160) FGD5 (ENSLOCG00000011142) ccdc174 (ENSLOCG00000011131) tatdn2 (ENSLOCG00000011120) vhl (ENSLOCG00000011111) trnt1 (ENSLOCG00000011105) #19 ENSLOCG00000011096 ##35 crbn (ENSLOCG00000011083) #20 ENSLOCG00000011076 ENSLOCG00000011067 lrrn1 (ENSLOCG00000018250) #21 setmar (ENSLOCG00000011063) #22 sumf1 (ENSLOCG00000011045) #23 ITPR1 (ENSLOCG00000010973) #24 bhlhe40 (ENSLOCG00000010962) #26 arl8bb (ENSLOCG00000010957) #27 edem1 (ENSLOCG00000010944) #28 gnat1 (ENSLOCG00000010938) sema3fa (ENSLOCG00000010911) ENSLOCG00000010900 mon1a (ENSLOCG00000010888) MST1R (ENSLOCG00000010867) ENSLOCG00000018249 camkvb (ENSLOCG00000010856) traip (ENSLOCG00000010841) ENSLOCG00000010829 inka1a (ENSLOCG00000018248) Reedfish MODERN SPECIES 9 il17rd (ENSECRG00000017250) HESX1 (ENSECRG00000017287) appl1 (ENSECRG00000017314) ASB14 (ENSECRG00000017394) DNAH12 (ENSECRG00000017507) rps23 (ENSECRG00000017688) ENSECRG00000017709 ghrl (ENSECRG00000017728) ENSECRG00000017747 vhl (ENSECRG00000017772) trnt1 (ENSECRG00000017785) #19 ENSECRG00000017808 ##35 crbn (ENSECRG00000017838) #20 ENSECRG00000017858 lrrn1 (ENSECRG00000017870) #21 setmar (ENSECRG00000017884) #22 sumf1 (ENSECRG00000017899) #23 ITPR1 (ENSECRG00000017959) #24 bhlhe40 (ENSECRG00000018114) #26 arl8bb (ENSECRG00000018149) #27 edem1 (ENSECRG00000018184) #28 GRM7 (ENSECRG00000018263) #29 ENSECRG00000018374 lmcd1 (ENSECRG00000018390) #32 abhd6b (ENSECRG00000018412) DNASE1L3 (ENSECRG00000018431) ENSECRG00000018457 FLNB (ENSECRG00000018485) slmapa (ENSECRG00000018695) dennd6aa (ENSECRG00000018889) ARF4 (ENSECRG00000018935) Elephant shark MODERN SPECIES 1080 setmar (ENSCMIG00000000997) #22 Cyclostomata ANCESTRAL SPECIES ENSGT00940000162663 #22 Lamprey MODERN SPECIES 735 ENSPMAG00000008810 setmar (ENSPMAG00000008815) #22 Hagfish MODERN SPECIES 194 ENSEBUG00000007181 ENSEBUG00000007098 #22 ENSEBUG00000011598 ENSEBUG00000014947 ENSEBUG00000014756 ENSEBUG00000003982 ENSEBUG00000004615 rps23 (ENSEBUG00000002922)