Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00730000111641.b #14 ENSGT00940000165309 #15 ENSGT00390000011238 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000177280 ENSGT00940000181580 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a Cichlidae ANCESTRAL SPECIES 1 ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00730000111641.b #14 ENSGT00940000165309 #15 ENSGT00390000011238 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00730000111641.b #14 ENSGT00940000165309 #15 ENSGT00390000011238 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00730000111641.b #14 ENSGT00940000165309 #15 ENSGT00390000011238 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Haplochromini ANCESTRAL SPECIES 1 ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00730000111641.b #14 ENSGT00940000165309 #15 ENSGT00390000011238 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 Haplochromini_A ANCESTRAL SPECIES ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00730000111641.b #14 ENSGT00940000165309 #15 ENSGT00390000011238 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000179368 ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Haplochromini_B ANCESTRAL SPECIES ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00730000111641.b #14 ENSGT00940000165309 #15 ENSGT00390000011238 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000179368 ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Zebra mbuna MODERN SPECIES 1108 gxylt2 (ENSMZEG00005008602) #7 shq1 (ENSMZEG00005008649) #8 rybpa (ENSMZEG00005008698) #9 prok2 (ENSMZEG00005008722) #10 gpr27 (ENSMZEG00005008748) #11 EIF4E3 (ENSMZEG00005008767) #12 foxp1b (ENSMZEG00005008804) #13 mdfic2 (ENSMZEG00005008892) #14 zgc:113054 (ENSMZEG00005008911) #15 mitfa (ENSMZEG00005008959) #16 FRMD4B (ENSMZEG00005009091) #17 arl6ip5a (ENSMZEG00005009134) #18 trnt1 (ENSMZEG00005009141) #19 ENSMZEG00005009157 #20 lrrn1 (ENSMZEG00005009199) #21 setmar (ENSMZEG00005009204) #22 ITPR1 (ENSMZEG00005009223) #23 bhlhe40 (ENSMZEG00005009312) #24 ENSMZEG00005009336 #25 ENSMZEG00005009383 #26 ENSMZEG00005009393 #27 ENSMZEG00005009403 #28 ENSMZEG00005009430 #29 chchd4a (ENSMZEG00005009465) #30 SEC61A1 (ENSMZEG00005009480) #31 ENSMZEG00005009503 #32 ENSMZEG00005009517 #33 ENSMZEG00005009526 #34 ENSMZEG00005009538 #35 ENSMZEG00005009568 #36 ZMYND8 (ENSMZEG00005009629) #37 Eastern happy MODERN SPECIES 17 rybpa (ENSACLG00000023062) #9 prok2 (ENSACLG00000023039) #10 gpr27 (ENSACLG00000023012) #11 EIF4E3 (ENSACLG00000022985) #12 foxp1b (ENSACLG00000022616) #13 mdfic2 (ENSACLG00000022587) #14 zgc:113054 (ENSACLG00000022547) #15 ENSACLG00000022536 mitfa (ENSACLG00000022427) #16 FRMD4B (ENSACLG00000022299) #17 arl6ip5a (ENSACLG00000022278) #18 trnt1 (ENSACLG00000022227) #19 ENSACLG00000022206 #20 ENSACLG00000022197 lrrn1 (ENSACLG00000022186) #21 setmar (ENSACLG00000022175) #22 ITPR1 (ENSACLG00000021949) #23 bhlhe40 (ENSACLG00000021923) #24 ENSACLG00000021909 arl8bb (ENSACLG00000021872) ENSACLG00000021860 SEMA3F (ENSACLG00000021730) ENSACLG00000021691 camkvb (ENSACLG00000021669) ENSACLG00000021639 mon1a (ENSACLG00000021606) traip (ENSACLG00000021544) grm6b (ENSACLG00000021488) comtb (ENSACLG00000021475) SRPK3 (ENSACLG00000021452) ccdc120b (ENSACLG00000021415) P. nyererei MODERN SPECIES 316 gxylt2 (ENSPNYG00000003893) #7 shq1 (ENSPNYG00000003878) #8 rybpa (ENSPNYG00000003852) #9 prok2 (ENSPNYG00000003818) #10 gpr27 (ENSPNYG00000003739) #11 EIF4E3 (ENSPNYG00000003711) #12 foxp1b (ENSPNYG00000003448) #13 mdfic2 (ENSPNYG00000003404) #14 zgc:113054 (ENSPNYG00000003372) #15 mitfa (ENSPNYG00000003348) #16 FRMD4B (ENSPNYG00000003194) #17 arl6ip5a (ENSPNYG00000003159) #18 trnt1 (ENSPNYG00000003120) #19 ENSPNYG00000003083 #20 lrrn1 (ENSPNYG00000003065) #21 setmar (ENSPNYG00000003058) #22 ITPR1 (ENSPNYG00000002900) #23 bhlhe40 (ENSPNYG00000002765) #24 Burton s mouthbrooder MODERN SPECIES 819 mitfa (ENSHBUG00000002744) #16 FRMD4B (ENSHBUG00000002761) #17 arl6ip5a (ENSHBUG00000002781) #18 trnt1 (ENSHBUG00000002797) #19 ENSHBUG00000002807 #20 lrrn1 (ENSHBUG00000002813) #21 setmar (ENSHBUG00000002829) #22 ITPR1 (ENSHBUG00000002972) #23 bhlhe40 (ENSHBUG00000003130) #24 Lyretail cichlid MODERN SPECIES 296 ENSNBRG00000024008 shq1 (ENSNBRG00000024004) #8 rybpa (ENSNBRG00000023999) #9 prok2 (ENSNBRG00000023996) #10 gpr27 (ENSNBRG00000023989) #11 EIF4E3 (ENSNBRG00000023984) #12 foxp1b (ENSNBRG00000023949) #13 zgc:113054 (ENSNBRG00000023930) #15 ENSNBRG00000023889 mitfa (ENSNBRG00000023738) #16 FRMD4B (ENSNBRG00000023651) #17 arl6ip5a (ENSNBRG00000023616) #18 trnt1 (ENSNBRG00000023606) #19 ENSNBRG00000023604 #20 lrrn1 (ENSNBRG00000023596) #21 setmar (ENSNBRG00000023590) #22 ITPR1 (ENSNBRG00000023567) #23 BHLHE40 (ENSNBRG00000023554) ##24 ENSNBRG00000023549 arl8bb (ENSNBRG00000023542) SEMA3F (ENSNBRG00000023532) camkvb (ENSNBRG00000023513) ENSNBRG00000023505 traip (ENSNBRG00000023496) grm6b (ENSNBRG00000023489) comtb (ENSNBRG00000023483) ENSNBRG00000023479 ccdc120b (ENSNBRG00000023464) cxxc1b (ENSNBRG00000023408) tfe3b (ENSNBRG00000023362) gnl3l (ENSNBRG00000023334) Nile tilapia MODERN SPECIES 17 rybpa (ENSONIG00000020265) #9 prok2 (ENSONIG00000030565) #10 gpr27 (ENSONIG00000040990) #11 EIF4E3 (ENSONIG00000020266) #12 foxp1b (ENSONIG00000020267) #13 mdfic2 (ENSONIG00000035668) #14 zgc:113054 (ENSONIG00000020268) #15 ddx4 (ENSONIG00000030953) ENSONIG00000041875 mitfa (ENSONIG00000020270) #16 FRMD4B (ENSONIG00000020271) #17 arl6ip5a (ENSONIG00000029243) #18 trnt1 (ENSONIG00000020273) #19 ENSONIG00000020274 #20 lrrn1 (ENSONIG00000020810) #21 setmar (ENSONIG00000020275) #22 ITPR1 (ENSONIG00000020276) #23 bhlhe40 (ENSONIG00000020277) #24 NAAA (ENSONIG00000020278) arl8bb (ENSONIG00000020279) ENSONIG00000028560 SEMA3F (ENSONIG00000020280) camkvb (ENSONIG00000036268) ENSONIG00000020282 mon1a (ENSONIG00000020283) traip (ENSONIG00000020284) grm6b (ENSONIG00000020285) comtb (ENSONIG00000020286) SRPK3 (ENSONIG00000020287) ccdc120b (ENSONIG00000020288) cxxc1b (ENSONIG00000020290) Midas cichlid MODERN SPECIES 1043 setmar (ENSACIG00000009270) #22 ITPR1 (ENSACIG00000009297) #23 ENSACIG00000009395 ENSACIG00000009416 #23 bhlhe40 (ENSACIG00000009498) #24 NAAA (ENSACIG00000009524) arl8bb (ENSACIG00000009595) SEMA3F (ENSACIG00000009744) camkvb (ENSACIG00000009801) MST1R (ENSACIG00000009876) mon1a (ENSACIG00000009986) traip (ENSACIG00000010020) grm6b (ENSACIG00000010172) comtb (ENSACIG00000010204) SRPK3 (ENSACIG00000010338) ccdc120b (ENSACIG00000010542) Pomacentridae ANCESTRAL SPECIES 33 ENSGT00940000158065 #7 ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00940000165309 #15 ENSGT00390000011238 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000181580 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h.c ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Pomacentridae_A ANCESTRAL SPECIES 2 ENSGT00940000162859.o ENSGT00940000158065 #7 ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00940000165309 #15 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000181580 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h.c ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a Amphiprion ANCESTRAL SPECIES 38 ENSGT00940000162859.o ENSGT00940000158065 #7 ENSGT00390000007605 #8 ENSGT00390000013995.b.a #9 ENSGT00940000167138 #10 ENSGT00890000139436.A.a #11 ENSGT00940000155865.c.b #12 ENSGT00940000165920.b #13 ENSGT00940000165309 #15 ENSGT00940000156326.a.b #16 ENSGT01020000230354.A.a.a #17 ENSGT00390000008631.a.o.a #18 ENSGT00390000009678 #19 ENSGT01050000244882.b.c.a.a #20 ENSGT00940000157154.d #21 ENSGT00940000162663 #22 ENSGT00940000155071.C #23 ENSGT00940000181580 ENSGT00940000158384.d #24 ENSGT00530000063548.A ENSGT00940000163250.B.b.a.a ENSGT00940000154861.n.a ENSGT00940000156703.e.a ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h.c ENSGT00940000154102.b.a.a Orange clownfish MODERN SPECIES 20 ppp4r2b (ENSAPEG00000021643) gxylt2 (ENSAPEG00000021661) #7 shq1 (ENSAPEG00000021686) #8 rybpa (ENSAPEG00000021704) #9 prok2 (ENSAPEG00000021745) #10 gpr27 (ENSAPEG00000021757) #11 EIF4E3 (ENSAPEG00000021766) #12 foxp1b (ENSAPEG00000021804) #13 zgc:113054 (ENSAPEG00000021963) #15 mitfa (ENSAPEG00000022061) #16 FRMD4B (ENSAPEG00000022527) #17 arl6ip5a (ENSAPEG00000022602) #18 trnt1 (ENSAPEG00000022627) #19 ENSAPEG00000022640 #20 lrrn1 (ENSAPEG00000022732) #21 setmar (ENSAPEG00000022737) #22 ITPR1 (ENSAPEG00000022750) #23 ENSAPEG00000022812 bhlhe40 (ENSAPEG00000022818) #24 ENSAPEG00000022832 ENSAPEG00000022852 arl8bb (ENSAPEG00000022867) SEMA3F (ENSAPEG00000022941) camkvb (ENSAPEG00000022969) ENSAPEG00000022994 mon1a (ENSAPEG00000023054) traip (ENSAPEG00000023069) grm6b (ENSAPEG00000023124) comtb (ENSAPEG00000023151) SRPK3 (ENSAPEG00000023166) ccdc120b (ENSAPEG00000023200) Clown anemonefish MODERN SPECIES 1008 lrrn1 (ENSAOCG00000024471) #21 setmar (ENSAOCG00000024469) #22 ITPR1 (ENSAOCG00000024461) #23 ENSAOCG00000024439 bhlhe40 (ENSAOCG00000001778) #24 NAAA (ENSAOCG00000024424) ENSAOCG00000024421 arl8bb (ENSAOCG00000024419) SEMA3F (ENSAOCG00000024410) Spiny chromis MODERN SPECIES 5 ppp4r2b (ENSAPOG00000014386) gxylt2 (ENSAPOG00000014376) #7 shq1 (ENSAPOG00000000397) #8 rybpa (ENSAPOG00000014342) #9 prok2 (ENSAPOG00000014310) #10 gpr27 (ENSAPOG00000014287) #11 EIF4E3 (ENSAPOG00000014276) #12 foxp1b (ENSAPOG00000014209) #13 zgc:113054 (ENSAPOG00000013829) #15 mitfa (ENSAPOG00000013777) #16 FRMD4B (ENSAPOG00000013741) #17 arl6ip5a (ENSAPOG00000013701) #18 trnt1 (ENSAPOG00000013687) #19 ENSAPOG00000013653 #20 lrrn1 (ENSAPOG00000013646) #21 setmar (ENSAPOG00000013638) #22 ITPR1 (ENSAPOG00000013619) #23 bhlhe40 (ENSAPOG00000013386) #24 NAAA (ENSAPOG00000013354) arl8bb (ENSAPOG00000013328) SEMA3F (ENSAPOG00000013275) camkvb (ENSAPOG00000013178) ENSAPOG00000013161 mon1a (ENSAPOG00000000350) traip (ENSAPOG00000013037) grm6b (ENSAPOG00000012948) comtb (ENSAPOG00000012877) SRPK3 (ENSAPOG00000012864) ccdc120b (ENSAPOG00000012838) mbd1b (ENSAPOG00000012810) cxxc1b (ENSAPOG00000012779) Bicolor damselfish MODERN SPECIES 386 prok2 (ENSSPAG00000021249) #10 gpr27 (ENSSPAG00000021244) #11 EIF4E3 (ENSSPAG00000021234) #12 foxp1b (ENSSPAG00000021219) #13 zgc:113054 (ENSSPAG00000021191) #15 ENSSPAG00000021184 mitfa (ENSSPAG00000021146) #16 FRMD4B (ENSSPAG00000021053) #17 arl6ip5a (ENSSPAG00000021027) #18 trnt1 (ENSSPAG00000021005) #19 ENSSPAG00000020992 #20 lrrn1 (ENSSPAG00000020983) #21 setmar (ENSSPAG00000020978) #22 ITPR1 (ENSSPAG00000020866) #23 bhlhe40 (ENSSPAG00000020842) #24 NAAA (ENSSPAG00000020825) arl8bb (ENSSPAG00000020792)