Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00950000185410
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00990000209473	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Glires	ANCESTRAL SPECIES	3	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00990000209473	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Rodentia	ANCESTRAL SPECIES	4	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00990000209473	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00990000209473	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Guinea pig	MODERN SPECIES	53	NGFR (ENSCPOG00000001114) #7	PHB1 (ENSCPOG00000000430) #8	ZNF652 (ENSCPOG00000039975) #9	PHOSPHO1 (ENSCPOG00000024347) #10	ENSCPOG00000020987 #11	GNGT2 (ENSCPOG00000030054) #12	B4GALNT2 (ENSCPOG00000006191) #13	IGF2BP1 (ENSCPOG00000020174) #14	GIP (ENSCPOG00000023966) #15	SNF8 (ENSCPOG00000020610) #16	UBE2Z (ENSCPOG00000024416) #17	ENSCPOG00000009017 #18	CALCOCO2 (ENSCPOG00000021273) #19	TTLL6 (ENSCPOG00000012509) #20	HOXB13 (ENSCPOG00000013509) #21	HOXB9 (ENSCPOG00000037597) #22	HOXB6 (ENSCPOG00000040707) #23	HOXB5 (ENSCPOG00000030746) #24	ENSCPOG00000010105 #25	ENSCPOG00000010107 #26	HOXB2 (ENSCPOG00000035468) #27	HOXB1 (ENSCPOG00000022183) #28	SKAP1 (ENSCPOG00000022118) #29	SNX11 (ENSCPOG00000020234) #30	CBX1 (ENSCPOG00000034435) #31	NFE2L1 (ENSCPOG00000030805) #32	COPZ2 (ENSCPOG00000019500) #33	CDK5RAP3 (ENSCPOG00000007275) #34	PRR15L (ENSCPOG00000035567) #35	PNPO (ENSCPOG00000003187) #36	SP2 (ENSCPOG00000014943) #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Degu	MODERN SPECIES	97	ENSODEG00000017118 #8	ENSODEG00000020479	ZNF652 (ENSODEG00000017173) #9	PHOSPHO1 (ENSODEG00000017221) #10	ABI3 (ENSODEG00000017358) #11	GNGT2 (ENSODEG00000017526) #12	B4GALNT2 (ENSODEG00000018456) #13	ENSODEG00000016991 #14	ENSODEG00000017109	GIP (ENSODEG00000017003) #15	ENSODEG00000017032 #16	UBE2Z (ENSODEG00000017306) #17	ATP5MC1 (ENSODEG00000017366) #18	TTLL6 (ENSODEG00000017145) #20	HOXB13 (ENSODEG00000017199) #21	HOXB9 (ENSODEG00000017293) #22	HOXB8 (ENSODEG00000017119)	HOXB6 (ENSODEG00000016988) #23	HOXB5 (ENSODEG00000017253) #24	HOXB4 (ENSODEG00000017038)	HOXB3 (ENSODEG00000017116) #26	HOXB2 (ENSODEG00000017153) #27	HOXB1 (ENSODEG00000017050) #28	SKAP1 (ENSODEG00000017533) #29	SNX11 (ENSODEG00000017458) #30	CBX1 (ENSODEG00000017272) #31	NFE2L1 (ENSODEG00000017348) #32	ENSODEG00000020421	COPZ2 (ENSODEG00000017565) #33	ENSODEG00000017229 #34	PNPO (ENSODEG00000017424) #36
Long-tailed chinchilla	MODERN SPECIES	158	NGFR (ENSCLAG00000015829) #7	PHB1 (ENSCLAG00000013248) #8	ZNF652 (ENSCLAG00000013368) #9	PHOSPHO1 (ENSCLAG00000015042) #10	ABI3 (ENSCLAG00000015475) #11	GNGT2 (ENSCLAG00000014970) #12	B4GALNT2 (ENSCLAG00000016224) #13	IGF2BP1 (ENSCLAG00000015853) #14	ENSCLAG00000014301 #15	SNF8 (ENSCLAG00000013387) #16	UBE2Z (ENSCLAG00000016068) #17	ATP5MC1 (ENSCLAG00000015723) #18	CALCOCO2 (ENSCLAG00000015881) #19	TTLL6 (ENSCLAG00000013529) #20	HOXB13 (ENSCLAG00000014855) #21	ENSCLAG00000015198 #22	HOXB7 (ENSCLAG00000014906)	HOXB6 (ENSCLAG00000015524) #23	HOXB5 (ENSCLAG00000014374) #24	HOXB4 (ENSCLAG00000014725)	HOXB3 (ENSCLAG00000015322) #26	HOXB2 (ENSCLAG00000015271) #27	HOXB1 (ENSCLAG00000013047) #28	SKAP1 (ENSCLAG00000015423) #29	SNX11 (ENSCLAG00000015837) #30	CBX1 (ENSCLAG00000013587) #31	NFE2L1 (ENSCLAG00000014836) #32	COPZ2 (ENSCLAG00000013544) #33	CDK5RAP3 (ENSCLAG00000012292) #34	PRR15L (ENSCLAG00000017903) #35	PNPO (ENSCLAG00000013871) #36
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000011644 #8	ZNF652 (ENSHGLG00000010452) #9	PHOSPHO1 (ENSHGLG00000011269) #10	ABI3 (ENSHGLG00000012283) #11	GNGT2 (ENSHGLG00000048834) #12	B4GALNT2 (ENSHGLG00000011792) #13	IGF2BP1 (ENSHGLG00000010492) #14	ENSHGLG00000010703 #15	SNF8 (ENSHGLG00000011519) #16	UBE2Z (ENSHGLG00000016280) #17	ATP5MC1 (ENSHGLG00000035460) #18	CALCOCO2 (ENSHGLG00000012114) #19	TTLL6 (ENSHGLG00000019187) #20	HOXB13 (ENSHGLG00000014634) #21	ENSHGLG00000048296	HOXB9 (ENSHGLG00000014731) #22	HOXB8 (ENSHGLG00000038380)	HOXB7 (ENSHGLG00000045318)	HOXB6 (ENSHGLG00000012400) #23	HOXB5 (ENSHGLG00000039265) #24	HOXB4 (ENSHGLG00000034075)	HOXB3 (ENSHGLG00000010686) #26	HOXB2 (ENSHGLG00000010090) #27	HOXB1 (ENSHGLG00000009781) #28	SKAP1 (ENSHGLG00000014563) #29	SNX11 (ENSHGLG00000016837) #30	CBX1 (ENSHGLG00000013574) #31	NFE2L1 (ENSHGLG00000012592) #32	COPZ2 (ENSHGLG00000018543) #33	CDK5RAP3 (ENSHGLG00000019464) #34	PRR15L (ENSHGLG00000014696) #35
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00990000209473	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Marmotini	ANCESTRAL SPECIES	8	ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Squirrel	MODERN SPECIES	90	ENSSTOG00000019929 #8	ZNF652 (ENSSTOG00000011303) #9	PHOSPHO1 (ENSSTOG00000007651) #10	ABI3 (ENSSTOG00000020017) #11	GNGT2 (ENSSTOG00000007644) #12	B4GALNT2 (ENSSTOG00000007604) #13	IGF2BP1 (ENSSTOG00000010643) #14	GIP (ENSSTOG00000004043) #15	SNF8 (ENSSTOG00000004023) #16	UBE2Z (ENSSTOG00000000796) #17	ATP5MC1 (ENSSTOG00000013404) #18	ENSSTOG00000013395 #19	TTLL6 (ENSSTOG00000006016) #20	ENSSTOG00000025444	HOXB13 (ENSSTOG00000014942) #21	HOXB9 (ENSSTOG00000009741) #22	HOXB8 (ENSSTOG00000028337)	HOXB7 (ENSSTOG00000025657)	HOXB6 (ENSSTOG00000020303) #23	HOXB5 (ENSSTOG00000009740) #24	HOXB4 (ENSSTOG00000009734)	HOXB3 (ENSSTOG00000025093) #26	HOXB2 (ENSSTOG00000023586) #27	HOXB1 (ENSSTOG00000028630) #28	SKAP1 (ENSSTOG00000013692) #29	SNX11 (ENSSTOG00000013684) #30	CBX1 (ENSSTOG00000023986) #31	NFE2L1 (ENSSTOG00000013664) #32	ENSSTOG00000027550 #33	CDK5RAP3 (ENSSTOG00000006244) #34	PRR15L (ENSSTOG00000006235) #35
Arctic ground squirrel	MODERN SPECIES	46	NGFR (ENSUPAG00010006025) #7	PHB1 (ENSUPAG00010006031) #8	ZNF652 (ENSUPAG00010006043) #9	PHOSPHO1 (ENSUPAG00010006065) #10	ABI3 (ENSUPAG00010006071) #11	GNGT2 (ENSUPAG00010006078) #12	B4GALNT2 (ENSUPAG00010006086) #13	IGF2BP1 (ENSUPAG00010006100) #14	GIP (ENSUPAG00010006136) #15	SNF8 (ENSUPAG00010006148) #16	UBE2Z (ENSUPAG00010006178) #17	ENSUPAG00010006195	CALCOCO2 (ENSUPAG00010006243) #19	TTLL6 (ENSUPAG00010006267) #20	HOXB13 (ENSUPAG00010006301) #21	HOXB9 (ENSUPAG00010006305) #22	HOXB8 (ENSUPAG00010006310)	HOXB7 (ENSUPAG00010006312)	HOXB6 (ENSUPAG00010006317) #23	HOXB5 (ENSUPAG00010006320) #24	HOXB4 (ENSUPAG00010006325)	HOXB3 (ENSUPAG00010006328) #26	HOXB2 (ENSUPAG00010006336) #27	HOXB1 (ENSUPAG00010006340) #28	SKAP1 (ENSUPAG00010006345) #29	SNX11 (ENSUPAG00010006370) #30	CBX1 (ENSUPAG00010006381) #31	NFE2L1 (ENSUPAG00010006396) #32	COPZ2 (ENSUPAG00010006455) #33	CDK5RAP3 (ENSUPAG00010006466) #34	PRR15L (ENSUPAG00010006473) #35
Eurasian red squirrel	MODERN SPECIES	12	PHB1 (ENSSVLG00005021310) #8	ZNF652 (ENSSVLG00005021244) #9	ENSSVLG00005021191 #10	ABI3 (ENSSVLG00005021097) #11	GNGT2 (ENSSVLG00005021063) #12	B4GALNT2 (ENSSVLG00005020850) #13	IGF2BP1 (ENSSVLG00005020596) #14	GIP (ENSSVLG00005020522) #15	SNF8 (ENSSVLG00005020472) #16	ENSSVLG00005020450	UBE2Z (ENSSVLG00005020428) #17	ATP5MC1 (ENSSVLG00005020344) #18	CALCOCO2 (ENSSVLG00005020296) #19	TTLL6 (ENSSVLG00005020005) #20	HOXB13 (ENSSVLG00005019820) #21	HOXB9 (ENSSVLG00005019725) #22	HOXB8 (ENSSVLG00005019675)	HOXB7 (ENSSVLG00005019618)	HOXB6 (ENSSVLG00005019586) #23	HOXB5 (ENSSVLG00005019546) #24	HOXB4 (ENSSVLG00005019455)	HOXB3 (ENSSVLG00005019421) #26	HOXB2 (ENSSVLG00005019378) #27	HOXB1 (ENSSVLG00005019304) #28	SKAP1 (ENSSVLG00005019232) #29	SNX11 (ENSSVLG00005019122) #30	CBX1 (ENSSVLG00005019034) #31	NFE2L1 (ENSSVLG00005018798) #32	COPZ2 (ENSSVLG00005018641) #33	CDK5RAP3 (ENSSVLG00005018459) #34	PRR15L (ENSSVLG00005018399) #35
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Kangaroo rat	MODERN SPECIES	326	Spop (ENSDORG00000001680)	Nxph3 (ENSDORG00000001674)	Ngfr (ENSDORG00000004457) #7	ENSDORG00000004455 #8	Zfp652 (ENSDORG00000028287) #9	Phospho1 (ENSDORG00000002249) #10	Abi3 (ENSDORG00000002245) #11	Gngt2 (ENSDORG00000023588) #12	Igf2bp1 (ENSDORG00000014371) #14	Snf8 (ENSDORG00000009262) #16	Ube2z (ENSDORG00000009258) #17	ENSDORG00000008511 #18	ENSDORG00000028385	ENSDORG00000024585 #19	Hoxb13 (ENSDORG00000008369) #21	Hoxb9 (ENSDORG00000027423) #22	Hoxb8 (ENSDORG00000007906)	Hoxb7 (ENSDORG00000007905)	Hoxb6 (ENSDORG00000023877) #23	Hoxb5 (ENSDORG00000007900) #24	Hoxb4 (ENSDORG00000007899)	Hoxb3 (ENSDORG00000007898) #26	Hoxb2 (ENSDORG00000007897) #27	Hoxb1 (ENSDORG00000007896) #28	Snx11 (ENSDORG00000029078) #30	Cbx1 (ENSDORG00000026399) #31	Nfe2l1 (ENSDORG00000000715) #32	Copz2 (ENSDORG00000013441) #33	Prr15l (ENSDORG00000027427) #35	Pnpo (ENSDORG00000014110) #36	Sp2 (ENSDORG00000014109) #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Lesser Egyptian jerboa	MODERN SPECIES	56	ENSJJAG00000009251 #8	ENSJJAG00000006327	Zfp652 (ENSJJAG00000010496) #9	Phospho1 (ENSJJAG00000010499) #10	Abi3 (ENSJJAG00000002821) #11	Gngt2 (ENSJJAG00000002044) #12	ENSJJAG00000002566	B4galnt2 (ENSJJAG00000006322) #13	Igf2bp1 (ENSJJAG00000002687) #14	Gip (ENSJJAG00000010688) #15	Snf8 (ENSJJAG00000006012) #16	ENSJJAG00000003530 #17	ENSJJAG00000010301	Ttll6 (ENSJJAG00000010253) #20	Hoxb13 (ENSJJAG00000010401) #21	Hoxb9 (ENSJJAG00000009821) #22	Hoxb8 (ENSJJAG00000002398)	Hoxb7 (ENSJJAG00000001284)	Hoxb6 (ENSJJAG00000000997) #23	Hoxb5 (ENSJJAG00000000763) #24	Hoxb4 (ENSJJAG00000002642)	Hoxb3 (ENSJJAG00000007804) #26	Hoxb2 (ENSJJAG00000009465) #27	Hoxb1 (ENSJJAG00000001073) #28	Skap1 (ENSJJAG00000003458) #29	ENSJJAG00000005754 #30	ENSJJAG00000007753 ##31	Nfe2l1 (ENSJJAG00000006432) #32	Copz2 (ENSJJAG00000001025) #33	ENSJJAG00000002511 #34	Prr15l (ENSJJAG00000006478) #35
Muroidea	ANCESTRAL SPECIES		ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Cricetidae	ANCESTRAL SPECIES		ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.a.a ##31	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34
Cricetinae	ANCESTRAL SPECIES		ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.`b.b	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.a.b ##31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Chinese hamster chok1gshd	MODERN SPECIES	33	Phb (ENSCGRG00001008513) #8	Zfp652 (ENSCGRG00001018513) #9	Phospho1 (ENSCGRG00001009639) #10	Abi3 (ENSCGRG00001013274) #11	Gngt2 (ENSCGRG00001021265) #12	B4galnt2 (ENSCGRG00001014272) #13	ENSCGRG00001000282 #14	Gip (ENSCGRG00001021533) #15	Snf8 (ENSCGRG00001000737) #16	Ube2z (ENSCGRG00001019150) #17	ENSCGRG00001022606	ENSCGRG00001010560	ENSCGRG00001011435 #19	Ttll6 (ENSCGRG00001018398) #20	Hoxb13 (ENSCGRG00001015060) #21	Hoxb9 (ENSCGRG00001015314) #22	Hoxb8 (ENSCGRG00001020235)	Hoxb7 (ENSCGRG00001021590)	Hoxb6 (ENSCGRG00001015674) #23	Hoxb5 (ENSCGRG00001016167) #24	Hoxb4 (ENSCGRG00001022431)	Hoxb3 (ENSCGRG00001016667) #26	Hoxb2 (ENSCGRG00001017587) #27	Hoxb1 (ENSCGRG00001024619) #28	ENSCGRG00001023355 #29	ENSCGRG00001020759 #29	Snx11 (ENSCGRG00001022221) #30	Cbx1 (ENSCGRG00001014799) ##31	Nfe2l1 (ENSCGRG00001015287) #32	Copz2 (ENSCGRG00001014767) #33	Cdk5rap3 (ENSCGRG00001006966) #34
Golden Hamster	MODERN SPECIES	674	ENSMAUG00000008827	Nxph3 (ENSMAUG00000016785)	Ngfr (ENSMAUG00000019765) #7	Phb (ENSMAUG00000013028) #8	Zfp652 (ENSMAUG00000009337) #9	Phospho1 (ENSMAUG00000012074) #10	Abi3 (ENSMAUG00000021085) #11	Gngt2 (ENSMAUG00000019144) #12	B4galnt2 (ENSMAUG00000007916) #13	Gip (ENSMAUG00000009238) #15	Snf8 (ENSMAUG00000001857) #16	Ube2z (ENSMAUG00000007792) #17	ENSMAUG00000021751	Ttll6 (ENSMAUG00000020973) #20	Hoxb13 (ENSMAUG00000008407) #21	Hoxb9 (ENSMAUG00000017720) #22	Hoxb8 (ENSMAUG00000012636)	Hoxb7 (ENSMAUG00000021297)	Hoxb6 (ENSMAUG00000021423) #23	Hoxb5 (ENSMAUG00000021419) #24	Hoxb4 (ENSMAUG00000009367)	Hoxb3 (ENSMAUG00000011251) #26	Hoxb2 (ENSMAUG00000021979) #27	Hoxb1 (ENSMAUG00000013237) #28	Skap1 (ENSMAUG00000022191) #29	Snx11 (ENSMAUG00000021528) #30	ENSMAUG00000003463 ##31	Nfe2l1 (ENSMAUG00000020456) #32	Copz2 (ENSMAUG00000010560) #33	Cdk5rap3 (ENSMAUG00000007991) #34	Pnpo (ENSMAUG00000021706) #36
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720.`b.a.a	ENSGT00940000159720.ab	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Prairie vole	MODERN SPECIES	114									ENSMOCG00000004266	ENSMOCG00000021226 #15	Snf8 (ENSMOCG00000016684) #16	Ube2z (ENSMOCG00000018241) #17	ENSMOCG00000013163	Ttll6 (ENSMOCG00000021089) #20	Hoxb13 (ENSMOCG00000021389) #21	Hoxb9 (ENSMOCG00000020312) #22	Hoxb8 (ENSMOCG00000018435)	Hoxb7 (ENSMOCG00000020820)	Hoxb6 (ENSMOCG00000020355) #23	Hoxb5 (ENSMOCG00000014523) #24	Hoxb4 (ENSMOCG00000022964)	Hoxb3 (ENSMOCG00000020739) #26	Hoxb2 (ENSMOCG00000014846) #27	Hoxb1 (ENSMOCG00000002452) #28	Skap1 (ENSMOCG00000018431) #29	Snx11 (ENSMOCG00000019303) #30	Cbx1 (ENSMOCG00000001520) #31	Nfe2l1 (ENSMOCG00000016002) #32	Copz2 (ENSMOCG00000022427) #33	Cdk5rap3 (ENSMOCG00000019534) #34	Prr15l (ENSMOCG00000006695) #35
Northern American deer mouse	MODERN SPECIES	21	Phb (ENSPEMG00000021310) #8	Zfp652 (ENSPEMG00000020862) #9	Phospho1 (ENSPEMG00000026539) #10	Abi3 (ENSPEMG00000014242) #11	Gngt2 (ENSPEMG00000027491) #12	B4galnt2 (ENSPEMG00000020717) #13	Igf2bp1 (ENSPEMG00000021974) #14	Gip (ENSPEMG00000021184) #15	Snf8 (ENSPEMG00000022229) #16	Ube2z (ENSPEMG00000020953) #17	Atp5g1 (ENSPEMG00000020590)	ENSPEMG00000028729 #19	ENSPEMG00000025676 #19	Ttll6 (ENSPEMG00000021918) #20	Hoxb13 (ENSPEMG00000021511) #21	Hoxb9 (ENSPEMG00000027158) #22	Hoxb5 (ENSPEMG00000030101) #24	Hoxb4 (ENSPEMG00000029805)	Hoxb3 (ENSPEMG00000028692) #26	Hoxb2 (ENSPEMG00000029510) #27	Hoxb1 (ENSPEMG00000023977) #28	Skap1 (ENSPEMG00000000585) #29	ENSPEMG00000020286	Snx11 (ENSPEMG00000000381) #30	Cbx1 (ENSPEMG00000020976) ##31	Nfe2l1 (ENSPEMG00000010512) #32	Copz2 (ENSPEMG00000011137) #33	Cdk5rap3 (ENSPEMG00000020712) #34	ENSPEMG00000030963	Prr15l (ENSPEMG00000024436) #35	Pnpo (ENSPEMG00000025094) #36
Murinae	ANCESTRAL SPECIES	6	ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h.jb #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Mus	ANCESTRAL SPECIES	2	ENSGT00950000183070.a.b.h.jb #8	ENSGT00860000136060	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34
Mus_A	ANCESTRAL SPECIES	2	ENSGT00950000183070.a.b.h.jb #8	ENSGT00860000136060	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34
Mus_B	ANCESTRAL SPECIES	2	ENSGT00950000183070.a.b.h.jb #8	ENSGT00860000136060	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34
Mus_C	ANCESTRAL SPECIES	3	ENSGT00950000183070.a.b.h.jb #8	ENSGT00860000136060	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc.b #31	ENSGT00940000153593.c.b.k	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34
spretus	MODERN SPECIES	2	Phb (MGP_SPRETEiJ_G0017855) #8	Zfp652 (MGP_SPRETEiJ_G0017856) #9	MGP_SPRETEiJ_G0017857	Phospho1 (MGP_SPRETEiJ_G0017858) #10	MGP_SPRETEiJ_G0017859 #11	Gngt2 (MGP_SPRETEiJ_G0017860) #12	B4galnt2 (MGP_SPRETEiJ_G0017861) #13	Igf2bp1 (MGP_SPRETEiJ_G0017862) #14	Gip (MGP_SPRETEiJ_G0017863) #15	Snf8 (MGP_SPRETEiJ_G0017864) #16	Ube2z (MGP_SPRETEiJ_G0017865) #17	Atp5g1 (MGP_SPRETEiJ_G0017866)	MGP_SPRETEiJ_G0017867 #19	Ttll6 (MGP_SPRETEiJ_G0017868) #20	Hoxb13 (MGP_SPRETEiJ_G0017869) #21	Hoxb9 (MGP_SPRETEiJ_G0017870) #22	Hoxb8 (MGP_SPRETEiJ_G0017871)	Hoxb7 (MGP_SPRETEiJ_G0017872)	Hoxb6 (MGP_SPRETEiJ_G0017873) #23	Hoxb5 (MGP_SPRETEiJ_G0017874) #24	Hoxb4 (MGP_SPRETEiJ_G0017875)	Hoxb3 (MGP_SPRETEiJ_G0017876) #26	Hoxb2 (MGP_SPRETEiJ_G0017877) #27	Hoxb1 (MGP_SPRETEiJ_G0017878) #28	MGP_SPRETEiJ_G0017879 #29	Snx11 (MGP_SPRETEiJ_G0017880) #30	Cbx1 (MGP_SPRETEiJ_G0017881) #31	MGP_SPRETEiJ_G0017882	Nfe2l1 (MGP_SPRETEiJ_G0017883) #32	Copz2 (MGP_SPRETEiJ_G0017884) #33	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #34
Steppe mouse	MODERN SPECIES	3291	ENSMSIG00000019388	ENSMSIG00000019385	Zfp652 (ENSMSIG00000019372) #9	Phospho1 (ENSMSIG00000019336) #10	Abi3 (ENSMSIG00000019324) #11	Gngt2 (ENSMSIG00000019268) #12	B4galnt2 (ENSMSIG00000019230) #13	Igf2bp1 (ENSMSIG00000019193) #14	Gip (ENSMSIG00000019162) #15	Snf8 (ENSMSIG00000019072) #16	Ube2z (ENSMSIG00000019038) #17	Atp5g1 (ENSMSIG00000018986)	ENSMSIG00000018956 #19	Ttll6 (ENSMSIG00000018881) #20	Hoxb13 (ENSMSIG00000018865) #21	Hoxb9 (ENSMSIG00000018823) #22	Hoxb8 (ENSMSIG00000018807)	Hoxb7 (ENSMSIG00000018805)	Hoxb6 (ENSMSIG00000018795) #23	Hoxb5 (ENSMSIG00000018787) #24	Hoxb4 (ENSMSIG00000018777)	ENSMSIG00000018776	Hoxb3 (ENSMSIG00000018771) #26	Hoxb2 (ENSMSIG00000018769) #27	Hoxb1 (ENSMSIG00000018752) #28	Skap1 (ENSMSIG00000018601) #29	Snx11 (ENSMSIG00000018546) #30	ENSMSIG00000018520	Cbx1 (ENSMSIG00000018447) #31	Nfe2l1 (ENSMSIG00000018374) #32	Copz2 (ENSMSIG00000018337) #33
Mouse	MODERN SPECIES	2	Ngfr (ENSMUSG00000000120) #7	Phb (ENSMUSG00000038845) #8	Zfp652 (ENSMUSG00000075595) #9	Phospho1 (ENSMUSG00000050860) #10	Abi3 (ENSMUSG00000018381) #11	Gngt2 (ENSMUSG00000038811) #12	B4galnt2 (ENSMUSG00000013418) #13	Igf2bp1 (ENSMUSG00000013415) #14	Gip (ENSMUSG00000014351) #15	Snf8 (ENSMUSG00000006058) #16	Ube2z (ENSMUSG00000014349) #17	Atp5g1 (ENSMUSG00000006057)	Calcoco2 (ENSMUSG00000006056) #19	Ttll6 (ENSMUSG00000038756) #20	Hoxb13 (ENSMUSG00000049604) #21	Hoxb9 (ENSMUSG00000020875) #22	Hoxb8 (ENSMUSG00000056648)	Hoxb7 (ENSMUSG00000038721)	Hoxb6 (ENSMUSG00000000690) #23	Hoxb5 (ENSMUSG00000038700) #24	Hoxb4 (ENSMUSG00000038692)	Hoxb3 (ENSMUSG00000048763) #26	Hoxb2 (ENSMUSG00000075588) #27	Hoxb1 (ENSMUSG00000018973) #28	Skap1 (ENSMUSG00000057058) #29	Snx11 (ENSMUSG00000020876) #30	Cbx1 (ENSMUSG00000018666) #31	Nfe2l1 (ENSMUSG00000038615) #32	Copz2 (ENSMUSG00000018672) #33	Cdk5rap3 (ENSMUSG00000018669) #34	Prr15l (ENSMUSG00000047040) #35
Ryukyu mouse	MODERN SPECIES	2	Ngfr (MGP_CAROLIEiJ_G0017009) #7	MGP_CAROLIEiJ_G0017010 #8	MGP_CAROLIEiJ_G0017011 #9	Phospho1 (MGP_CAROLIEiJ_G0017012) #10	Abi3 (MGP_CAROLIEiJ_G0017013) #11	Gngt2 (MGP_CAROLIEiJ_G0017014) #12	B4galnt2 (MGP_CAROLIEiJ_G0017015) #13	Igf2bp1 (MGP_CAROLIEiJ_G0017016) #14	Gip (MGP_CAROLIEiJ_G0017017) #15	Snf8 (MGP_CAROLIEiJ_G0017018) #16	MGP_CAROLIEiJ_G0017019 #17	MGP_CAROLIEiJ_G0017020	MGP_CAROLIEiJ_G0017021 #19	Ttll6 (MGP_CAROLIEiJ_G0017022) #20	Hoxb13 (MGP_CAROLIEiJ_G0017023) #21	Hoxb9 (MGP_CAROLIEiJ_G0017024) #22	Hoxb8 (MGP_CAROLIEiJ_G0017025)	Hoxb7 (MGP_CAROLIEiJ_G0017026)	Hoxb6 (MGP_CAROLIEiJ_G0017027) #23	Hoxb5 (MGP_CAROLIEiJ_G0017028) #24	Hoxb4 (MGP_CAROLIEiJ_G0017029)	Hoxb3 (MGP_CAROLIEiJ_G0017030) #26	Hoxb2 (MGP_CAROLIEiJ_G0017031) #27	Hoxb1 (MGP_CAROLIEiJ_G0017032) #28	Skap1 (MGP_CAROLIEiJ_G0017033) #29	Snx11 (MGP_CAROLIEiJ_G0017034) #30	Cbx1 (MGP_CAROLIEiJ_G0017035) #31	MGP_CAROLIEiJ_G0017036	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #32	Copz2 (MGP_CAROLIEiJ_G0017038) #33	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #34
Shrew mouse	MODERN SPECIES	5	MGP_PahariEiJ_G0018139 #8	Zfp652 (MGP_PahariEiJ_G0018140) #9	MGP_PahariEiJ_G0018141	Phospho1 (MGP_PahariEiJ_G0018142) #10	Abi3 (MGP_PahariEiJ_G0018143) #11	Gngt2 (MGP_PahariEiJ_G0018144) #12	B4galnt2 (MGP_PahariEiJ_G0018145) #13	MGP_PahariEiJ_G0018146 #14	Gip (MGP_PahariEiJ_G0018147) #15	Snf8 (MGP_PahariEiJ_G0018148) #16	Ube2z (MGP_PahariEiJ_G0018149) #17	Atp5g1 (MGP_PahariEiJ_G0018150)	MGP_PahariEiJ_G0018151 #19	Ttll6 (MGP_PahariEiJ_G0018152) #20	Hoxb13 (MGP_PahariEiJ_G0018153) #21	Hoxb9 (MGP_PahariEiJ_G0018154) #22	Hoxb8 (MGP_PahariEiJ_G0018155)	Hoxb7 (MGP_PahariEiJ_G0018156)	Hoxb6 (MGP_PahariEiJ_G0018157) #23	Hoxb5 (MGP_PahariEiJ_G0018158) #24	Hoxb4 (MGP_PahariEiJ_G0018159)	Hoxb3 (MGP_PahariEiJ_G0018160) #26	Hoxb2 (MGP_PahariEiJ_G0018161) #27	Hoxb1 (MGP_PahariEiJ_G0018162) #28	Skap1 (MGP_PahariEiJ_G0018163) #29	Snx11 (MGP_PahariEiJ_G0018164) #30	Cbx1 (MGP_PahariEiJ_G0018165) #31	MGP_PahariEiJ_G0018166	Nfe2l1 (MGP_PahariEiJ_G0018167) #32	Copz2 (MGP_PahariEiJ_G0018168) #33	Cdk5rap3 (MGP_PahariEiJ_G0018169) #34
Rat	MODERN SPECIES	1	Nxph3 (ENSRNOG00000005185)	Ngfr (ENSRNOG00000005392) #7	Phb1 (ENSRNOG00000046799) #8	Zfp652 (ENSRNOG00000017001) #9	ENSRNOG00000068958	Phospho1 (ENSRNOG00000005569) #10	Abi3 (ENSRNOG00000005575) #11	B4galnt2 (ENSRNOG00000067203) #13	Igf2bp1 (ENSRNOG00000006122) #14	Gip (ENSRNOG00000006306) #15	Snf8 (ENSRNOG00000006500) #16	Ube2z (ENSRNOG00000006868) #17	ENSRNOG00000066153 #19	Ttll6 (ENSRNOG00000004939) #20	Hoxb13 (ENSRNOG00000007491) #21	Hoxb9 (ENSRNOG00000007573) #22	Hoxb8 (ENSRNOG00000007585)	Hoxb7 (ENSRNOG00000007611)	Hoxb6 (ENSRNOG00000007823) #23	Hoxb5 (ENSRNOG00000008010) #24	Hoxb4 (ENSRNOG00000008191)	Hoxb3 (ENSRNOG00000008313) #26	Hoxb2 (ENSRNOG00000008365) #27	Hoxb1 (ENSRNOG00000008506) #28	Skap1 (ENSRNOG00000023881) #29	Snx11 (ENSRNOG00000008642) #30	Cbx1 (ENSRNOG00000008689) #31	Nfe2l1 (ENSRNOG00000008830) #32	Copz2 (ENSRNOG00000009225) #33	Cdk5rap3 (ENSRNOG00000048747) #34	Prr15l (ENSRNOG00000049162) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Ngfr (ENSNGAG00000016145) #7	Phb (ENSNGAG00000012333) #8	Zfp652 (ENSNGAG00000010366) #9	Phospho1 (ENSNGAG00000008704) #10	Abi3 (ENSNGAG00000003386) #11	Gngt2 (ENSNGAG00000001081) #12	B4galnt2 (ENSNGAG00000016426) #13	Igf2bp1 (ENSNGAG00000015679) #14	Gip (ENSNGAG00000020354) #15	Snf8 (ENSNGAG00000001366) #16	Ube2z (ENSNGAG00000024296) #17	ENSNGAG00000024212	ENSNGAG00000023585 #19	Ttll6 (ENSNGAG00000011763) #20	Hoxb13 (ENSNGAG00000011053) #21	Hoxb9 (ENSNGAG00000010851) #22	Hoxb8 (ENSNGAG00000010647)	Hoxb7 (ENSNGAG00000010205)	Hoxb6 (ENSNGAG00000000973) #23	Hoxb5 (ENSNGAG00000023238) #24	Hoxb4 (ENSNGAG00000021768)	Hoxb3 (ENSNGAG00000020227) #26	Hoxb2 (ENSNGAG00000019089) #27	Hoxb1 (ENSNGAG00000018593) #28	Skap1 (ENSNGAG00000012571) #29	Snx11 (ENSNGAG00000010446) #30	Cbx1 (ENSNGAG00000006760) #31	Nfe2l1 (ENSNGAG00000000736) #32	Copz2 (ENSNGAG00000023713) #33	ENSNGAG00000000747 #34	ENSNGAG00000022529
Lagomorpha	ANCESTRAL SPECIES		ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b.dc #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35	ENSGT00390000011219 #36	ENSGT00940000159590 #37
Rabbit	MODERN SPECIES	10	ENSOCUG00000007209 #8	ZNF652 (ENSOCUG00000002965) #9	PHOSPHO1 (ENSOCUG00000016347) #10	ABI3 (ENSOCUG00000016339) #11	GNGT2 (ENSOCUG00000016331) #12	B4GALNT2 (ENSOCUG00000003531) #13	IGF2BP1 (ENSOCUG00000004411) #14	GIP (ENSOCUG00000004410) #15	SNF8 (ENSOCUG00000009156) #16	UBE2Z (ENSOCUG00000009159) #17	ATP5MC1 (ENSOCUG00000016225) #18	CALCOCO2 (ENSOCUG00000016209) #19	ENSOCUG00000038154	TTLL6 (ENSOCUG00000006289) #20	HOXB13 (ENSOCUG00000012816) #21	HOXB9 (ENSOCUG00000027316) #22	HOXB8 (ENSOCUG00000029186)	HOXB5 (ENSOCUG00000023093) #24	HOXB6 (ENSOCUG00000011560) #23	HOXB3 (ENSOCUG00000023337) #26	HOXB2 (ENSOCUG00000024951) #27	HOXB1 (ENSOCUG00000001720) #28	SKAP1 (ENSOCUG00000001717) #29	SNX11 (ENSOCUG00000002309) #30	CBX1 (ENSOCUG00000008021) #31	NFE2L1 (ENSOCUG00000022298) #32	COPZ2 (ENSOCUG00000001802) #33	CDK5RAP3 (ENSOCUG00000012325) #34	PRR15L (ENSOCUG00000017489) #35	PNPO (ENSOCUG00000017484) #36	SP2 (ENSOCUG00000027415) #37
Primates	ANCESTRAL SPECIES	3	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00950000185410
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00950000185410	ENSGT00390000000713 #34
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00950000185410	ENSGT00390000000713 #34
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00950000185410	ENSGT00390000000713 #34
Greater bamboo lemur	MODERN SPECIES	168								IGF2BP1 (ENSPSMG00000020445) #14	GIP (ENSPSMG00000020432) #15	SNF8 (ENSPSMG00000020426) #16	UBE2Z (ENSPSMG00000020387) #17	ENSPSMG00000020369	CALCOCO2 (ENSPSMG00000020308) #19	ENSPSMG00000020243 #20	HOXB13 (ENSPSMG00000020237) #21	HOXB9 (ENSPSMG00000020232) #22	HOXB8 (ENSPSMG00000020227)	HOXB7 (ENSPSMG00000020218)	HOXB6 (ENSPSMG00000020209) #23	HOXB5 (ENSPSMG00000020200) #24	HOXB4 (ENSPSMG00000020187)	HOXB3 (ENSPSMG00000020182) #26	HOXB2 (ENSPSMG00000020176) #27	HOXB1 (ENSPSMG00000020167) #28	SKAP1 (ENSPSMG00000020161) #29	SNX11 (ENSPSMG00000020139) #30	CBX1 (ENSPSMG00000020119) #31
Coquerels sifaka	MODERN SPECIES	120	ENSPCOG00000004228 #8	ZNF652 (ENSPCOG00000026434) #9	PHOSPHO1 (ENSPCOG00000025336) #10	ABI3 (ENSPCOG00000022568) #11	GNGT2 (ENSPCOG00000012867) #12	B4GALNT2 (ENSPCOG00000013984) #13	ENSPCOG00000018672	IGF2BP1 (ENSPCOG00000006475) #14	GIP (ENSPCOG00000024832) #15	SNF8 (ENSPCOG00000026895) #16	UBE2Z (ENSPCOG00000014816) #17	ENSPCOG00000008741	CALCOCO2 (ENSPCOG00000021998) #19	TTLL6 (ENSPCOG00000021391) #20	HOXB13 (ENSPCOG00000018182) #21	HOXB9 (ENSPCOG00000027130) #22	HOXB8 (ENSPCOG00000024853)	HOXB7 (ENSPCOG00000028248)	HOXB6 (ENSPCOG00000019931) #23	HOXB5 (ENSPCOG00000015692) #24	HOXB4 (ENSPCOG00000022963)	HOXB3 (ENSPCOG00000020113) #26	HOXB2 (ENSPCOG00000017380) #27	HOXB1 (ENSPCOG00000025930) #28	SKAP1 (ENSPCOG00000022221) #29	SNX11 (ENSPCOG00000011015) #30	ENSPCOG00000010902 #31	NFE2L1 (ENSPCOG00000021740) #32	COPZ2 (ENSPCOG00000018359) #33	CDK5RAP3 (ENSPCOG00000016598) #34	PNPO (ENSPCOG00000017906) #36
Mouse lemur	MODERN SPECIES	7	ENSMICG00000043778 #8	ZNF652 (ENSMICG00000006959) #9	PHOSPHO1 (ENSMICG00000032861) #10	ABI3 (ENSMICG00000008618) #11	GNGT2 (ENSMICG00000045728) #12	B4GALNT2 (ENSMICG00000008596) #13	ENSMICG00000037104	ENSMICG00000013324 #14	GIP (ENSMICG00000013317) #15	SNF8 (ENSMICG00000013305) #16	UBE2Z (ENSMICG00000046102) #17	ENSMICG00000003414	CALCOCO2 (ENSMICG00000015330) #19	TTLL6 (ENSMICG00000007549) #20	HOXB13 (ENSMICG00000007546) #21	HOXB9 (ENSMICG00000038413) #22	HOXB8 (ENSMICG00000045961)	HOXB7 (ENSMICG00000007539)	HOXB6 (ENSMICG00000042216) #23	HOXB5 (ENSMICG00000047139) #24	HOXB4 (ENSMICG00000043173)	HOXB3 (ENSMICG00000007522) #26	HOXB2 (ENSMICG00000038222) #27	HOXB1 (ENSMICG00000048152) #28	SKAP1 (ENSMICG00000047158) #29	ENSMICG00000029923	SNX11 (ENSMICG00000014741) #30	NFE2L1 (ENSMICG00000014716) #32	ENSMICG00000009510 #31	COPZ2 (ENSMICG00000014097) #33	CDK5RAP3 (ENSMICG00000014077) #34
Bushbaby	MODERN SPECIES	133	NGFR (ENSOGAG00000015270) #7	ENSOGAG00000027015 #8	ZNF652 (ENSOGAG00000003574) #9	PHOSPHO1 (ENSOGAG00000034530) #10	ABI3 (ENSOGAG00000029723) #11	B4GALNT2 (ENSOGAG00000003570) #13	IGF2BP1 (ENSOGAG00000001270) #14	GIP (ENSOGAG00000010130) #15	ENSOGAG00000001269 #16	UBE2Z (ENSOGAG00000001267) #17	ATP5MC1 (ENSOGAG00000011713) #18	CALCOCO2 (ENSOGAG00000011709) #19	TTLL6 (ENSOGAG00000011701) #20	HOXB13 (ENSOGAG00000032643) #21	ENSOGAG00000034464	HOXB9 (ENSOGAG00000008668) #22	HOXB8 (ENSOGAG00000029480)	HOXB7 (ENSOGAG00000008667)	HOXB6 (ENSOGAG00000008661) #23	HOXB5 (ENSOGAG00000032432) #24	HOXB4 (ENSOGAG00000033709)	HOXB3 (ENSOGAG00000032090) #26	HOXB2 (ENSOGAG00000029280) #27	HOXB1 (ENSOGAG00000031645) #28	SKAP1 (ENSOGAG00000015855) #29	SNX11 (ENSOGAG00000015854) #30	CBX1 (ENSOGAG00000005658) #31	NFE2L1 (ENSOGAG00000025191) #32	COPZ2 (ENSOGAG00000004954) #33	CDK5RAP3 (ENSOGAG00000004951) #34	PRR15L (ENSOGAG00000006187) #35
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843 #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34
Tarsier	MODERN SPECIES	5167									SNF8 (ENSTSYG00000004576) #16	UBE2Z (ENSTSYG00000036628) #17	ATP5G1 (ENSTSYG00000028465) #18	CALCOCO2 (ENSTSYG00000013102) #19	TTLL6 (ENSTSYG00000013796) #20	HOXB13 (ENSTSYG00000037206) #21	ENSTSYG00000033639	HOXB9 (ENSTSYG00000027064) #22
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00390000007741.a #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00390000007843.v #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000157416 #9	ENSGT00390000007741.a.m #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00940000159720	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Cebidae	ANCESTRAL SPECIES	10	ENSGT00730000110974 #7	ENSGT00950000183070.a.b.h #8	ENSGT00940000157416 #9	ENSGT00390000007741.a.m #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34
Marmoset	MODERN SPECIES	17	PHB1 (ENSCJAG00000007174) #8	ZNF652 (ENSCJAG00000007206) #9	PHOSPHO1 (ENSCJAG00000047817) #10	ABI3 (ENSCJAG00000007219) #11	GNGT2 (ENSCJAG00000041153) #12	B4GALNT2 (ENSCJAG00000007247) #13	ENSCJAG00000079002	IGF2BP1 (ENSCJAG00000007258) #14	GIP (ENSCJAG00000007300) #15	SNF8 (ENSCJAG00000007322) #16	UBE2Z (ENSCJAG00000007326) #17	ATP5MC1 (ENSCJAG00000075375) #18	CALCOCO2 (ENSCJAG00000007375) #19	TTLL6 (ENSCJAG00000007395) #20	HOXB13 (ENSCJAG00000007437) #21	HOXB9 (ENSCJAG00000007442) #22	HOXB8 (ENSCJAG00000045730)	HOXB7 (ENSCJAG00000007457)	HOXB6 (ENSCJAG00000007467) #23	HOXB5 (ENSCJAG00000007472) #24	HOXB4 (ENSCJAG00000007480)	HOXB3 (ENSCJAG00000007487) #26	HOXB2 (ENSCJAG00000007494) #27	HOXB1 (ENSCJAG00000007496) #28	ENSCJAG00000038853	SKAP1 (ENSCJAG00000007504) #29	SNX11 (ENSCJAG00000039549) #30	CBX1 (ENSCJAG00000042052) #31	NFE2L1 (ENSCJAG00000007542) #32	ENSCJAG00000058197	COPZ2 (ENSCJAG00000007567) #33
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00390000007741.a.m #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000159720	ENSGT00950000183025.a.t.b #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT01050000247531	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00940000154172.gb.b.b.b	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34
Capuchin	MODERN SPECIES	228												HOXB13 (ENSCCAG00000036871) #21	ENSCCAG00000036164	ENSCCAG00000019672	HOXB7 (ENSCCAG00000023947)	HOXB9 (ENSCCAG00000035938) #22	HOXB8 (ENSCCAG00000026051)	HOXB6 (ENSCCAG00000022842) #23	HOXB5 (ENSCCAG00000036867) #24	HOXB4 (ENSCCAG00000020311)	HOXB3 (ENSCCAG00000013598) #26	HOXB2 (ENSCCAG00000024035) #27	HOXB1 (ENSCCAG00000027667) #28	ENSCCAG00000019181	SKAP1 (ENSCCAG00000035663) #29	SNX11 (ENSCCAG00000030167) #30	CBX1 (ENSCCAG00000025085) #31	NFE2L1 (ENSCCAG00000029090) #32	COPZ2 (ENSCCAG00000021292) #33	CDK5RAP3 (ENSCCAG00000038053) #34	PNPO (ENSCCAG00000029175) #36
Bolivian squirrel monkey	MODERN SPECIES	86	PHOSPHO1 (ENSSBOG00000031500) #10	ABI3 (ENSSBOG00000013949) #11	GNGT2 (ENSSBOG00000030712) #12	B4GALNT2 (ENSSBOG00000026556) #13	IGF2BP1 (ENSSBOG00000020973) #14	GIP (ENSSBOG00000020793) #15	SNF8 (ENSSBOG00000026186) #16	ENSSBOG00000028176	UBE2Z (ENSSBOG00000036224) #17	ENSSBOG00000028794	CALCOCO2 (ENSSBOG00000035276) #19	TTLL6 (ENSSBOG00000028908) #20	HOXB13 (ENSSBOG00000029964) #21	PRAC2 (ENSSBOG00000032603)	ENSSBOG00000030794	HOXB9 (ENSSBOG00000030218) #22	HOXB8 (ENSSBOG00000034884)	HOXB7 (ENSSBOG00000020028)	HOXB6 (ENSSBOG00000031900) #23	HOXB5 (ENSSBOG00000018198) #24	HOXB4 (ENSSBOG00000024432)	HOXB3 (ENSSBOG00000030844) #26	HOXB2 (ENSSBOG00000025070) #27	HOXB1 (ENSSBOG00000034875) #28	ENSSBOG00000019520	SKAP1 (ENSSBOG00000029434) #29	SNX11 (ENSSBOG00000026967) #30	ENSSBOG00000031880 ##31	NFE2L1 (ENSSBOG00000023867) #32	COPZ2 (ENSSBOG00000033633) #33	CDK5RAP3 (ENSSBOG00000033272) #34
Mas night monkey	MODERN SPECIES	481	ZNF652 (ENSANAG00000031074) #9	ENSANAG00000032587 #10	ABI3 (ENSANAG00000029869) #11	GNGT2 (ENSANAG00000020682) #12	B4GALNT2 (ENSANAG00000023170) #13	IGF2BP1 (ENSANAG00000022606) #14	GIP (ENSANAG00000030188) #15	SNF8 (ENSANAG00000032764) #16	UBE2Z (ENSANAG00000029636) #17	ATP5MC1 (ENSANAG00000024881) #18	ENSANAG00000020581 #19	TTLL6 (ENSANAG00000031133) #20	PRAC2 (ENSANAG00000025557)	HOXB13 (ENSANAG00000023991) #21	ENSANAG00000030331	HOXB9 (ENSANAG00000035156) #22	HOXB8 (ENSANAG00000028346)	HOXB7 (ENSANAG00000025513)	HOXB6 (ENSANAG00000023964) #23	HOXB5 (ENSANAG00000024299) #24	HOXB4 (ENSANAG00000024005)	HOXB3 (ENSANAG00000032072) #26	HOXB2 (ENSANAG00000023626) #27	HOXB1 (ENSANAG00000032306) #28	ENSANAG00000023400	SKAP1 (ENSANAG00000026853) #29	SNX11 (ENSANAG00000022588) #30	ENSANAG00000036853 ##31	NFE2L1 (ENSANAG00000027606) #32	COPZ2 (ENSANAG00000023309) #33	CDK5RAP3 (ENSANAG00000021880) #34
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00390000007843.v #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000157416 #9	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000157416 #9	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Vervet Monkey	MODERN SPECIES	7	NGFR (ENSCSAG00000002443) #7	ENSCSAG00000002455 #8	ZNF652 (ENSCSAG00000002462) #9	PHOSPHO1 (ENSCSAG00000002465) #10	ABI3 (ENSCSAG00000002473) #11	GNGT2 (ENSCSAG00000002475) #12	B4GALNT2 (ENSCSAG00000002479) #13	IGF2BP1 (ENSCSAG00000002487) #14	GIP (ENSCSAG00000002491) #15	SNF8 (ENSCSAG00000002494) #16	UBE2Z (ENSCSAG00000002496) #17	ATP5MC1 (ENSCSAG00000002502) #18	CALCOCO2 (ENSCSAG00000002506) #19	TTLL6 (ENSCSAG00000002511) #20	HOXB13 (ENSCSAG00000002517) #21	HOXB9 (ENSCSAG00000002521) #22	HOXB8 (ENSCSAG00000002523)	HOXB7 (ENSCSAG00000002524)	HOXB6 (ENSCSAG00000002526) #23	HOXB5 (ENSCSAG00000002529) #24	HOXB4 (ENSCSAG00000002530)	HOXB3 (ENSCSAG00000002533) #26	HOXB2 (ENSCSAG00000002536) #27	HOXB1 (ENSCSAG00000002538) #28	ENSCSAG00000019043	SKAP1 (ENSCSAG00000002542) #29	SNX11 (ENSCSAG00000002545) #30	CBX1 (ENSCSAG00000002547) #31	NFE2L1 (ENSCSAG00000002550) #32	COPZ2 (ENSCSAG00000002558) #33	CDK5RAP3 (ENSCSAG00000002562) #34
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Macaca	ANCESTRAL SPECIES	4	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b.e #18	ENSGT00950000183025.a #19	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000157416 #9	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b.e #18	ENSGT00950000183025.a #19	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00980000199681	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Crab-eating macaque	MODERN SPECIES	7	B4GALNT2 (ENSMFAG00000003631) #13	IGF2BP1 (ENSMFAG00000001613) #14	ENSMFAG00000059536	GIP (ENSMFAG00000045846) #15	SNF8 (ENSMFAG00000000584) #16	UBE2Z (ENSMFAG00000045564) #17	ENSMFAG00000037178 #18	ENSMFAG00000055147	CALCOCO2 (ENSMFAG00000000840) #19	ENSMFAG00000030534	ENSMFAG00000059251	TTLL6 (ENSMFAG00000035518) #20	HOXB13 (ENSMFAG00000039799) #21	PRAC1 (ENSMFAG00000039547)	ENSMFAG00000047612	HOXB9 (ENSMFAG00000062545) #22	HOXB8 (ENSMFAG00000033418)	HOXB7 (ENSMFAG00000039298)	HOXB6 (ENSMFAG00000002294) #23	HOXB5 (ENSMFAG00000042418) #24	HOXB4 (ENSMFAG00000041000)	ENSMFAG00000062776	HOXB2 (ENSMFAG00000034146) #27	HOXB1 (ENSMFAG00000052359) #28	SKAP1 (ENSMFAG00000038763) #29	ENSMFAG00000048147	ENSMFAG00000047205	SNX11 (ENSMFAG00000001845) #30	CBX1 (ENSMFAG00000036790) #31	NFE2L1 (ENSMFAG00000035583) #32	COPZ2 (ENSMFAG00000045896) #33
Rhesus	MODERN SPECIES	7	ZNF652 (ENSMMUG00000003453) #9	PHOSPHO1 (ENSMMUG00000002436) #10	ABI3 (ENSMMUG00000002437) #11	B4GALNT2 (ENSMMUG00000015845) #13	ENSMMUG00000057553	CALCOCO2 (ENSMMUG00000012178) #19	IGF2BP1 (ENSMMUG00000011533) #14	GIP (ENSMMUG00000049405) #15	SNF8 (ENSMMUG00000021087) #16	UBE2Z (ENSMMUG00000057164) #17	ATP5MC1 (ENSMMUG00000013395) #18	ENSMMUG00000016305	TTLL6 (ENSMMUG00000003436) #20	HOXB13 (ENSMMUG00000060879) #21	PRAC1 (ENSMMUG00000053394)	HOXB9 (ENSMMUG00000052505) #22	HOXB8 (ENSMMUG00000020868)	HOXB7 (ENSMMUG00000055324)	HOXB6 (ENSMMUG00000062283) #23	HOXB5 (ENSMMUG00000051420) #24	ENSMMUG00000045203	HOXB4 (ENSMMUG00000052130)	HOXB2 (ENSMMUG00000057001) #27	HOXB1 (ENSMMUG00000022212) #28	SKAP1 (ENSMMUG00000050742) #29	SNX11 (ENSMMUG00000020658) #30	CBX1 (ENSMMUG00000019882) #31	NFE2L1 (ENSMMUG00000021935) #32	COPZ2 (ENSMMUG00000021934) #33	CDK5RAP3 (ENSMMUG00000004760) #34	PRR15L (ENSMMUG00000050551) #35
Pig-tailed macaque	MODERN SPECIES	494	PHOSPHO1 (ENSMNEG00000028521) #10	ABI3 (ENSMNEG00000036355) #11	GNGT2 (ENSMNEG00000029921) #12	B4GALNT2 (ENSMNEG00000044329) #13	IGF2BP1 (ENSMNEG00000033825) #14	GIP (ENSMNEG00000042307) #15	SNF8 (ENSMNEG00000032473) #16	UBE2Z (ENSMNEG00000040572) #17	ENSMNEG00000011359 #18	ENSMNEG00000027016	CALCOCO2 (ENSMNEG00000041410) #19	TTLL6 (ENSMNEG00000035034) #20	HOXB13 (ENSMNEG00000036275) #21	PRAC2 (ENSMNEG00000038796)	PRAC1 (ENSMNEG00000045191)	HOXB9 (ENSMNEG00000045476) #22	HOXB8 (ENSMNEG00000034944)	HOXB7 (ENSMNEG00000040001)	HOXB6 (ENSMNEG00000042554) #23	HOXB5 (ENSMNEG00000039003) #24	HOXB4 (ENSMNEG00000032435)	HOXB3 (ENSMNEG00000032425) #26	HOXB2 (ENSMNEG00000043416) #27	HOXB1 (ENSMNEG00000036848) #28	ENSMNEG00000033446	SKAP1 (ENSMNEG00000015541) #29	SNX11 (ENSMNEG00000034920) #30	CBX1 (ENSMNEG00000039720) #31	NFE2L1 (ENSMNEG00000037921) #32	COPZ2 (ENSMNEG00000038720) #33	CDK5RAP3 (ENSMNEG00000029039) #34
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000157416 #9	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Olive baboon	MODERN SPECIES	8	ABI3 (ENSPANG00000042285) #11	GNGT2 (ENSPANG00000022835) #12	B4GALNT2 (ENSPANG00000022834) #13	ENSPANG00000038197	ENSPANG00000049141	IGF2BP1 (ENSPANG00000022833) #14	GIP (ENSPANG00000022832) #15	SNF8 (ENSPANG00000022831) #16	UBE2Z (ENSPANG00000022830) #17	ATP5MC1 (ENSPANG00000022880) #18	CALCOCO2 (ENSPANG00000022881) #19	ENSPANG00000049214	TTLL6 (ENSPANG00000022885) #20	HOXB13 (ENSPANG00000048407) #21	PRAC1 (ENSPANG00000034268)	HOXB9 (ENSPANG00000022896) #22	HOXB8 (ENSPANG00000022895)	HOXB7 (ENSPANG00000041701)	HOXB6 (ENSPANG00000022891) #23	HOXB5 (ENSPANG00000022889) #24	HOXB4 (ENSPANG00000022888)	ENSPANG00000045928	HOXB2 (ENSPANG00000034765) #27	HOXB1 (ENSPANG00000022886) #28	SKAP1 (ENSPANG00000022897) #29	ENSPANG00000026200	SNX11 (ENSPANG00000022898) #30	CBX1 (ENSPANG00000022906) #31	NFE2L1 (ENSPANG00000022904) #32	COPZ2 (ENSPANG00000022903) #33	CDK5RAP3 (ENSPANG00000022902) #34
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000018696.n	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00950000183198.c.a.a.b	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Sooty mangabey	MODERN SPECIES	564	PHOSPHO1 (ENSCATG00000040780) #10	ABI3 (ENSCATG00000044608) #11	GNGT2 (ENSCATG00000040371) #12	B4GALNT2 (ENSCATG00000041984) #13	IGF2BP1 (ENSCATG00000041707) #14	ENSCATG00000044943	GIP (ENSCATG00000031593) #15	SNF8 (ENSCATG00000038375) #16	UBE2Z (ENSCATG00000038755) #17	ATP5MC1 (ENSCATG00000030174) #18	CALCOCO2 (ENSCATG00000007708) #19	ENSCATG00000016293	TTLL6 (ENSCATG00000029768) #20	HOXB13 (ENSCATG00000041758) #21	PRAC1 (ENSCATG00000038550)	HOXB9 (ENSCATG00000002169) #22	HOXB8 (ENSCATG00000025318)	HOXB7 (ENSCATG00000042829)	HOXB6 (ENSCATG00000043342) #23	HOXB5 (ENSCATG00000027616) #24	HOXB3 (ENSCATG00000031126) #26	HOXB4 (ENSCATG00000040704)	HOXB2 (ENSCATG00000035238) #27	HOXB1 (ENSCATG00000035575) #28	SKAP1 (ENSCATG00000044458) #29	ENSCATG00000019817	SNX11 (ENSCATG00000030351) #30	ENSCATG00000034735 ##31	NFE2L1 (ENSCATG00000040775) #32	COPZ2 (ENSCATG00000042708) #33	CDK5RAP3 (ENSCATG00000006699) #34
Drill	MODERN SPECIES	1297	ZNF652 (ENSMLEG00000034995) #9	PHOSPHO1 (ENSMLEG00000039410) #10	ABI3 (ENSMLEG00000030652) #11	GNGT2 (ENSMLEG00000036852) #12	B4GALNT2 (ENSMLEG00000020666) #13	IGF2BP1 (ENSMLEG00000026086) #14	ENSMLEG00000043660	GIP (ENSMLEG00000032963) #15	SNF8 (ENSMLEG00000037501) #16	UBE2Z (ENSMLEG00000043345) #17	ATP5MC1 (ENSMLEG00000026746) #18	CALCOCO2 (ENSMLEG00000034129) #19	TTLL6 (ENSMLEG00000023683) #20	HOXB13 (ENSMLEG00000043860) #21	PRAC1 (ENSMLEG00000033309)	HOXB9 (ENSMLEG00000030602) #22	HOXB8 (ENSMLEG00000007179)	HOXB7 (ENSMLEG00000042331)	HOXB6 (ENSMLEG00000029580) #23	HOXB5 (ENSMLEG00000009970) #24	HOXB3 (ENSMLEG00000026268) #26	HOXB4 (ENSMLEG00000029897)	HOXB2 (ENSMLEG00000031955) #27	HOXB1 (ENSMLEG00000037557) #28	SKAP1 (ENSMLEG00000029308) #29	SNX11 (ENSMLEG00000039008) #30	CBX1 (ENSMLEG00000038745) #31	NFE2L1 (ENSMLEG00000039330) #32	COPZ2 (ENSMLEG00000039090) #33	CDK5RAP3 (ENSMLEG00000033869) #34	PRR15L (ENSMLEG00000020212) #35
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00940000157416 #9	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713 #34	ENSGT00940000154534.a #35
Black snub-nosed monkey	MODERN SPECIES	1661	ZNF652 (ENSRBIG00000044859) #9	PHOSPHO1 (ENSRBIG00000041603) #10	ABI3 (ENSRBIG00000020770) #11	GNGT2 (ENSRBIG00000042345) #12	B4GALNT2 (ENSRBIG00000035256) #13	IGF2BP1 (ENSRBIG00000035739) #14	GIP (ENSRBIG00000039886) #15	SNF8 (ENSRBIG00000038039) #16	UBE2Z (ENSRBIG00000038578) #17	ATP5MC1 (ENSRBIG00000026711) #18	CALCOCO2 (ENSRBIG00000035235) #19	TTLL6 (ENSRBIG00000035925) #20	HOXB13 (ENSRBIG00000035598) #21	PRAC2 (ENSRBIG00000032698)	PRAC1 (ENSRBIG00000041996)	HOXB9 (ENSRBIG00000035654) #22	HOXB8 (ENSRBIG00000043329)	HOXB7 (ENSRBIG00000039896)	HOXB6 (ENSRBIG00000029050) #23	HOXB5 (ENSRBIG00000015821) #24	HOXB4 (ENSRBIG00000036141)	HOXB3 (ENSRBIG00000036705) #26	HOXB2 (ENSRBIG00000029105) #27	HOXB1 (ENSRBIG00000041849) #28	SKAP1 (ENSRBIG00000042563) #29	SNX11 (ENSRBIG00000030129) #30	ENSRBIG00000027048 #31	NFE2L1 (ENSRBIG00000034817) #32	COPZ2 (ENSRBIG00000038810) #33	CDK5RAP3 (ENSRBIG00000039441) #34	PRR15L (ENSRBIG00000030176) #35
Golden snub-nosed monkey	MODERN SPECIES	585	PHOSPHO1 (ENSRROG00000036306) #10	ABI3 (ENSRROG00000038650) #11	GNGT2 (ENSRROG00000021991) #12	B4GALNT2 (ENSRROG00000001500) #13	ENSRROG00000030406	IGF2BP1 (ENSRROG00000039581) #14	GIP (ENSRROG00000029793) #15	SNF8 (ENSRROG00000041052) #16	UBE2Z (ENSRROG00000038314) #17	ATP5MC1 (ENSRROG00000031127) #18	CALCOCO2 (ENSRROG00000042598) #19	TTLL6 (ENSRROG00000044208) #20	HOXB13 (ENSRROG00000042147) #21	PRAC2 (ENSRROG00000033208)	PRAC1 (ENSRROG00000039006)	HOXB9 (ENSRROG00000044654) #22	HOXB8 (ENSRROG00000045349)	HOXB7 (ENSRROG00000035066)	HOXB6 (ENSRROG00000028093) #23	HOXB5 (ENSRROG00000030674) #24	HOXB3 (ENSRROG00000037630) #26	HOXB2 (ENSRROG00000044849) #27	HOXB1 (ENSRROG00000042747) #28	SKAP1 (ENSRROG00000031517) #29	SNX11 (ENSRROG00000029464) #30	CBX1 (ENSRROG00000041227) #31	NFE2L1 (ENSRROG00000044774) #32	COPZ2 (ENSRROG00000030969) #33	CDK5RAP3 (ENSRROG00000044651) #34	PRR15L (ENSRROG00000009484) #35	PNPO (ENSRROG00000044027) #36
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713.h.b #34	ENSGT00940000154534.a #35
Hominidae	ANCESTRAL SPECIES	16	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713.h.a #34	ENSGT00940000154534.a #35
Orangutan	MODERN SPECIES	8	ZNF652 (ENSPPYG00000008919) #9	PHOSPHO1 (ENSPPYG00000008917) #10	ABI3 (ENSPPYG00000008916) #11	ENSPPYG00000008915 #12	B4GALNT2 (ENSPPYG00000008914) #13	IGF2BP1 (ENSPPYG00000008913) #14	GIP (ENSPPYG00000008912) #15	ENSPPYG00000008911 #16	UBE2Z (ENSPPYG00000032681) #17	ATP5MC1 (ENSPPYG00000008909) #18	CALCOCO2 (ENSPPYG00000008907) #19	TTLL6 (ENSPPYG00000008906) #20	HOXB13 (ENSPPYG00000008904) #21	ENSPPYG00000036609	PRAC1 (ENSPPYG00000008903)	HOXB9 (ENSPPYG00000008902) #22	HOXB8 (ENSPPYG00000038542)	HOXB7 (ENSPPYG00000008901)	HOXB6 (ENSPPYG00000008899) #23	HOXB5 (ENSPPYG00000008898) #24	HOXB4 (ENSPPYG00000008897)	HOXB3 (ENSPPYG00000008896) #26	HOXB2 (ENSPPYG00000008895) #27	HOXB1 (ENSPPYG00000008894) #28	SKAP1 (ENSPPYG00000008893) #29	SNX11 (ENSPPYG00000008892) #30	ENSPPYG00000008891 ##31	NFE2L1 (ENSPPYG00000036998) #32	ENSPPYG00000008889 #33	CDK5RAP3 (ENSPPYG00000008888) #34	PRR15L (ENSPPYG00000008887) #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713.h.a.a.b #34	ENSGT00940000154534.a #35
Gorilla	MODERN SPECIES	18	ABI3 (ENSGGOG00000001954) #11	ENSGGOG00000001953 #12	B4GALNT2 (ENSGGOG00000008204) #13	IGF2BP1 (ENSGGOG00000008872) #14	GIP (ENSGGOG00000013847) #15	SNF8 (ENSGGOG00000025290) #16	ENSGGOG00000041818 #17	ENSGGOG00000041027	ATP5MC1 (ENSGGOG00000001626) #18	ENSGGOG00000040493	CALCOCO2 (ENSGGOG00000005537) #19	TTLL6 (ENSGGOG00000001947) #20	HOXB13 (ENSGGOG00000001945) #21	ENSGGOG00000042122	PRAC1 (ENSGGOG00000027105)	ENSGGOG00000036688 #22	HOXB8 (ENSGGOG00000039810)	HOXB7 (ENSGGOG00000002637)	HOXB6 (ENSGGOG00000002634) #23	HOXB5 (ENSGGOG00000023582) #24	HOXB3 (ENSGGOG00000012838) #26	HOXB2 (ENSGGOG00000009910) #27	HOXB1 (ENSGGOG00000009904) #28	SKAP1 (ENSGGOG00000012624) #29	ENSGGOG00000025896	CBX1 (ENSGGOG00000024063) #31	NFE2L1 (ENSGGOG00000002268) #32	COPZ2 (ENSGGOG00000002264) #33	ENSGGOG00000022994 #34	PRR15L (ENSGGOG00000037816) #35	PNPO (ENSGGOG00000003786) #36
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713.h.a.a.b #34	ENSGT00940000154534.a #35
Pan	ANCESTRAL SPECIES	3	ENSGT00390000007741.a.k #10	ENSGT00940000161380 #11	ENSGT01100000263525.b.a #12	ENSGT00390000006679.b #13	ENSGT00940000160427 #14	ENSGT00390000005121 #15	ENSGT00390000007843.u.a #16	ENSGT01100000264599	ENSGT00940000159091 #17	ENSGT00940000154298.a.b #18	ENSGT00950000183025.a #19	ENSGT00940000161434 #20	ENSGT00940000159029 #21	ENSGT00860000135909	ENSGT00940000165611	ENSGT00940000161386 #22	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108 #23	ENSGT00940000158354 #24	ENSGT00940000162072	ENSGT00940000159774 #26	ENSGT00940000155029.c.b #27	ENSGT00940000159503 #28	ENSGT00390000017856.b #29	ENSGT00940000160113 #30	ENSGT00940000154152.d.b #31	ENSGT00950000182892.a.b.a.a #32	ENSGT00390000004405.b #33	ENSGT00390000000713.h.a.a.b #34	ENSGT00940000154534.a #35
Chimpanzee	MODERN SPECIES	8	PHOSPHO1 (ENSPTRG00000009372) #10	ABI3 (ENSPTRG00000009371) #11	GNGT2 (ENSPTRG00000009370) #12	B4GALNT2 (ENSPTRG00000009369) #13	IGF2BP1 (ENSPTRG00000009368) #14	GIP (ENSPTRG00000009367) #15	SNF8 (ENSPTRG00000051067) #16	UBE2Z (ENSPTRG00000009365) #17	ENSPTRG00000051053	ATP5MC1 (ENSPTRG00000009364) #18	CALCOCO2 (ENSPTRG00000009363) #19	TTLL6 (ENSPTRG00000009361) #20	HOXB13 (ENSPTRG00000009360) #21	PRAC2 (ENSPTRG00000048455)	PRAC1 (ENSPTRG00000009359)	HOXB9 (ENSPTRG00000009358) #22	HOXB8 (ENSPTRG00000048497)	HOXB7 (ENSPTRG00000009357)	HOXB6 (ENSPTRG00000009356) #23	HOXB5 (ENSPTRG00000009355) #24	HOXB4 (ENSPTRG00000009354)	HOXB3 (ENSPTRG00000052423) #26	HOXB2 (ENSPTRG00000009352) #27	HOXB1 (ENSPTRG00000009351) #28	SKAP1 (ENSPTRG00000009350) #29	SNX11 (ENSPTRG00000009349) #30	CBX1 (ENSPTRG00000052115) #31	NFE2L1 (ENSPTRG00000022631) #32	COPZ2 (ENSPTRG00000009346) #33	CDK5RAP3 (ENSPTRG00000009345) #34	PRR15L (ENSPTRG00000047216) #35
Bonobo	MODERN SPECIES	8	ZNF652 (ENSPPAG00000024727) #9	PHOSPHO1 (ENSPPAG00000042612) #10	ABI3 (ENSPPAG00000025669) #11	ENSPPAG00000028035 #12	B4GALNT2 (ENSPPAG00000033188) #13	IGF2BP1 (ENSPPAG00000040224) #14	ENSPPAG00000029732	SNF8 (ENSPPAG00000030822) #16	ENSPPAG00000029824	ENSPPAG00000001213 #17	ATP5MC1 (ENSPPAG00000039996) #18	CALCOCO2 (ENSPPAG00000037813) #19	TTLL6 (ENSPPAG00000036197) #20	HOXB13 (ENSPPAG00000027794) #21	PRAC1 (ENSPPAG00000014004)	HOXB9 (ENSPPAG00000028486) #22	HOXB8 (ENSPPAG00000034804)	HOXB7 (ENSPPAG00000010963)	HOXB6 (ENSPPAG00000032229) #23	HOXB5 (ENSPPAG00000039181) #24	HOXB4 (ENSPPAG00000040659)	HOXB3 (ENSPPAG00000032630) #26	HOXB2 (ENSPPAG00000027417) #27	HOXB1 (ENSPPAG00000039129) #28	SKAP1 (ENSPPAG00000039277) #29	SNX11 (ENSPPAG00000033185) #30	ENSPPAG00000030413 #31	NFE2L1 (ENSPPAG00000031737) #32	COPZ2 (ENSPPAG00000043351) #33	ENSPPAG00000029145 #34	PRR15L (ENSPPAG00000003316) #35
Human	MODERN SPECIES	8	ZNF652 (ENSG00000198740) #9	PHOSPHO1 (ENSG00000173868) #10	ABI3 (ENSG00000108798) #11	GNGT2 (ENSG00000167083) #12	B4GALNT2 (ENSG00000167080) #13	IGF2BP1 (ENSG00000159217) #14	GIP (ENSG00000159224) #15	SNF8 (ENSG00000159210) #16	UBE2Z (ENSG00000159202) #17	ATP5MC1 (ENSG00000159199) #18	CALCOCO2 (ENSG00000136436) #19	TTLL6 (ENSG00000170703) #20	HOXB13 (ENSG00000159184) #21	PRAC2 (ENSG00000229637)	PRAC1 (ENSG00000159182)	HOXB9 (ENSG00000170689) #22	HOXB8 (ENSG00000120068)	HOXB7 (ENSG00000260027)	HOXB6 (ENSG00000108511) #23	HOXB5 (ENSG00000120075) #24	HOXB4 (ENSG00000182742)	HOXB3 (ENSG00000120093) #26	HOXB2 (ENSG00000173917) #27	HOXB1 (ENSG00000120094) #28	SKAP1 (ENSG00000141293) #29	SNX11 (ENSG00000002919) #30	CBX1 (ENSG00000108468) #31	NFE2L1 (ENSG00000082641) #32	COPZ2 (ENSG00000005243) #33	CDK5RAP3 (ENSG00000108465) #34	PRR15L (ENSG00000167183) #35