Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00940000159898	ENSGT00390000006826 #7	ENSGT00950000183184.a.a #8	ENSGT00940000158361 #9	ENSGT00390000015818.f #10	ENSGT00680000100018.a.a.a #11	ENSGT00940000160909 #12	ENSGT00390000005923 #13	ENSGT00940000156472 #14	ENSGT00390000016619.a #15	ENSGT00940000160494 #16	ENSGT00940000155558 #17	ENSGT00940000157043 #19	ENSGT00940000160192 #20	ENSGT00940000158532 #21	ENSGT00940000160478 #22	ENSGT00940000157578 #23	ENSGT00940000158443 #24	ENSGT00940000155392 #25	ENSGT00940000153458.B #26	ENSGT00940000155611.s #27	ENSGT00730000111148 #28	ENSGT00440000038972 #29	ENSGT01100000263523.A #30	ENSGT00940000155850 #33	ENSGT00940000159964 #34	ENSGT00950000183140.a.b #35	ENSGT00940000157618 #36	ENSGT00940000156791 #37	ENSGT00680000100059	ENSGT00940000157883.a.b.e.a
Equus	ANCESTRAL SPECIES	18	ENSGT00390000006826 #7	ENSGT00950000183184.a.a #8	ENSGT00940000158361 #9	ENSGT00390000015818.f #10	ENSGT00680000100018.a.a.a #11	ENSGT00940000160909 #12	ENSGT00390000005923 #13	ENSGT00940000156472 #14	ENSGT00390000016619.a #15	ENSGT00940000160494 #16	ENSGT00940000155558 #17	ENSGT00900000142191 #18	ENSGT00940000157043 #19	ENSGT00940000160192 #20	ENSGT00940000158532 #21	ENSGT00940000160478 #22	ENSGT00940000157578 #23	ENSGT00940000158443 #24	ENSGT00940000155392 #25	ENSGT00940000153458.B #26	ENSGT00940000155611.s #27	ENSGT00730000111148 #28	ENSGT00440000038972 #29	ENSGT01100000263523.A #30	ENSGT00940000155850 #33	ENSGT00940000159964 #34	ENSGT00950000183140.a.b #35	ENSGT00940000157618 #36	ENSGT00940000156791 #37	ENSGT00680000100059	ENSGT00940000157883.a.b.e.a
Donkey	MODERN SPECIES	24	ZSWIM2 (ENSEASG00005021322) #7	FAM171B (ENSEASG00005021329) #8	ITGAV (ENSEASG00005021589) #9	ZC3H15 (ENSEASG00005022074) #10	FSIP2 (ENSEASG00005022084) #11	ZNF804A (ENSEASG00005022092) #12	NUP35 (ENSEASG00005022100) #13	DUSP19 (ENSEASG00005036068) #14	NCKAP1 (ENSEASG00005022110) #15	FRZB (ENSEASG00005022120) #16	DNAJC10 (ENSEASG00005022124) #17	ENSEASG00005022130 #18	PDE1A (ENSEASG00005022135) #19	PPP1R1C (ENSEASG00005022142) #20	ITPRID2 (ENSEASG00005022146) #21	NEUROD1 (ENSEASG00005022155) #22	CERKL (ENSEASG00005022157) #23	ITGA4 (ENSEASG00005022220) #24	UBE2E3 (ENSEASG00005022279) #25	CWC22 (ENSEASG00005022287) #26	ZNF385B (ENSEASG00005022300) #27	SESTD1 (ENSEASG00005022309) #28	CCDC141 (ENSEASG00005022349) #29	TTN (ENSEASG00005024097) #30	ENSEASG00005036015 #31	ENSEASG00005024821 #32	PLEKHA3 (ENSEASG00005022419) #33	FKBP7 (ENSEASG00005022426) #34	PJVK (ENSEASG00005022430) #35	PRKRA (ENSEASG00005022436) #36	OSBPL6 (ENSEASG00005022455) #37
Horse	MODERN SPECIES	9	FAM171B (ENSECAG00000021377) #9	ZC3H15 (ENSECAG00000017149) #10	ENSECAG00000057875	FSIP2 (ENSECAG00000013931) #11	ZNF804A (ENSECAG00000011071) #12	NUP35 (ENSECAG00000003968) #13	DUSP19 (ENSECAG00000020886) #14	NCKAP1 (ENSECAG00000021389) #15	FRZB (ENSECAG00000017132) #16	DNAJC10 (ENSECAG00000010084) #17	ENSECAG00000053763 #18	ENSECAG00000049792	PDE1A (ENSECAG00000022509) #19	PPP1R1C (ENSECAG00000022338) #20	ITPRID2 (ENSECAG00000012220) #21	NEUROD1 (ENSECAG00000028766) #22	CERKL (ENSECAG00000022850) #23	ITGA4 (ENSECAG00000010500) #24	ENSECAG00000045626	UBE2E3 (ENSECAG00000007233) #25	ENSECAG00000052690	ENSECAG00000057506	CWC22 (ENSECAG00000010769) #26	ZNF385B (ENSECAG00000000538) #27	SESTD1 (ENSECAG00000011753) #28	CCDC141 (ENSECAG00000007805) #29	TTN (ENSECAG00000042020) #30	PLEKHA3 (ENSECAG00000010715) #33	FKBP7 (ENSECAG00000008092) #34	PJVK (ENSECAG00000007310) #35	PRKRA (ENSECAG00000024263) #36
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00940000159898	ENSGT00390000006826 #7	ENSGT00950000183184.a.a #8	ENSGT00940000158361 #9	ENSGT00390000015818.f #10	ENSGT00680000100018.a.a.a #11	ENSGT00940000160909 #12	ENSGT00390000005923 #13	ENSGT00940000156472 #14	ENSGT00390000016619.a #15	ENSGT00940000160494 #16	ENSGT00940000155558 #17	ENSGT00940000157043 #19	ENSGT00940000160192 #20	ENSGT00940000158532 #21	ENSGT00940000160478 #22	ENSGT00940000157578 #23	ENSGT00940000158443 #24	ENSGT00940000155392 #25	ENSGT00940000153458.B #26	ENSGT00940000155611.s #27	ENSGT00730000111148 #28	ENSGT00440000038972 #29	ENSGT01100000263523.A #30	ENSGT00940000155850 #33	ENSGT00940000159964 #34	ENSGT00950000183140.a.b #35	ENSGT00940000157618 #36	ENSGT00940000156791 #37	ENSGT00680000100059	ENSGT00940000157883.a.b.e.a
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00940000159898	ENSGT00390000006826 #7	ENSGT00950000183184.a.a #8	ENSGT00940000158361 #9	ENSGT00390000015818.f #10	ENSGT00680000100018.a.a.a #11	ENSGT00940000160909 #12	ENSGT00390000005923 #13	ENSGT00940000156472 #14	ENSGT00390000016619.a #15	ENSGT00940000160494 #16	ENSGT00940000155558 #17	ENSGT00940000157043 #19	ENSGT00940000160192 #20	ENSGT00940000158532 #21	ENSGT00940000160478 #22	ENSGT00940000157578 #23	ENSGT00940000158443 #24	ENSGT00940000155392 #25	ENSGT00940000153458.B #26	ENSGT00940000155611.s #27	ENSGT00730000111148 #28	ENSGT00440000038972 #29	ENSGT01100000263523.A #30	ENSGT01100000263532.A.a.a.b.b.b #31	ENSGT01100000263532.A.a.a.a.b.c.b ##31	ENSGT00940000155850 #33	ENSGT00940000159964 #34	ENSGT00950000183140.a.b #35	ENSGT00940000157618 #36	ENSGT00940000156791 #37
Microbat	MODERN SPECIES	942	ING5 (ENSMLUG00000029235)	D2HGDH (ENSMLUG00000027975)	GAL3ST2 (ENSMLUG00000003372)	NEU4 (ENSMLUG00000003374)	PDCD1 (ENSMLUG00000009623)	ENSMLUG00000009638	NUP35 (ENSMLUG00000013154) #13	DUSP19 (ENSMLUG00000013149) #14	NCKAP1 (ENSMLUG00000011345) #15	ENSMLUG00000030095 #16	ENSMLUG00000027215	DNAJC10 (ENSMLUG00000000680) #17	PDE1A (ENSMLUG00000009939) #19	ENSMLUG00000009929 #20	ITPRID2 (ENSMLUG00000011724) #21	NEUROD1 (ENSMLUG00000025259) #22	ENSMLUG00000014227 #23	ITGA4 (ENSMLUG00000014215) #24	UBE2E3 (ENSMLUG00000014945) #25	ENSMLUG00000024453	ENSMLUG00000030576	ENSMLUG00000013437 #26	ZNF385B (ENSMLUG00000013424) #27	SESTD1 (ENSMLUG00000005032) #28	ENSMLUG00000027856 #29	ENSMLUG00000005976	TTN (ENSMLUG00000005832) #30	ENSMLUG00000024664 #31	PLEKHA3 (ENSMLUG00000005823) #33	FKBP7 (ENSMLUG00000005816) #34	PJVK (ENSMLUG00000005814) #35
Greater horseshoe bat	MODERN SPECIES	26	ENSRFEG00010014289 #8	ITGAV (ENSRFEG00010014333) #9	ZC3H15 (ENSRFEG00010014504) #10	ENSRFEG00010014673	ENSRFEG00010014769 #11	ZNF804A (ENSRFEG00010015054) #12	ENSRFEG00010015146	NUP35 (ENSRFEG00010015209) #13	DUSP19 (ENSRFEG00010015325) #14	NCKAP1 (ENSRFEG00010015402) #15	FRZB (ENSRFEG00010016272) #16	DNAJC10 (ENSRFEG00010016359) #17	PDE1A (ENSRFEG00010016512) #19	PPP1R1C (ENSRFEG00010016876) #20	ITPRID2 (ENSRFEG00010016967) #21	NEUROD1 (ENSRFEG00010017386) #22	CERKL (ENSRFEG00010017416) #23	ITGA4 (ENSRFEG00010017895) #24	UBE2E3 (ENSRFEG00010017987) #25	CWC22 (ENSRFEG00010018027) #26	ZNF385B (ENSRFEG00010018087) #27	SESTD1 (ENSRFEG00010018265) #28	CCDC141 (ENSRFEG00010018317) #29	ENSRFEG00010020094 ##31	PLEKHA3 (ENSRFEG00010022147) #33	FKBP7 (ENSRFEG00010022148) #34	DFNB59 (ENSRFEG00010022149) #35	PRKRA (ENSRFEG00010022150) #36	OSBPL6 (ENSRFEG00010022151) #37	RBM45 (ENSRFEG00010022152)	ENSRFEG00010022153