Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Primates	ANCESTRAL SPECIES	17	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00860000135650	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Gibbon	MODERN SPECIES	3	SSTR4 (ENSNLEG00000018627) #7	THBD (ENSNLEG00000011558) #8	CD93 (ENSNLEG00000011559) #9	ENSNLEG00000033556 #10	GZF1 (ENSNLEG00000011565) #11	NAPB (ENSNLEG00000027099) #12	CSTL1 (ENSNLEG00000011597) #13	CST11 (ENSNLEG00000011603) #14	ENSNLEG00000033018 #15	CST8 (ENSNLEG00000011607) #16	CST9 (ENSNLEG00000011616) #17	CST3 (ENSNLEG00000035405) #18	CST2 (ENSNLEG00000036132) #19	CST5 (ENSNLEG00000015517) #20	SYNDIG1 (ENSNLEG00000015521) #21	CST7 (ENSNLEG00000015525) #22	APMAP (ENSNLEG00000032557) #23	ACSS1 (ENSNLEG00000015554) #24	ENSNLEG00000015558 #25	ENTPD6 (ENSNLEG00000015563) #26	PYGB (ENSNLEG00000015641) #27	ABHD12 (ENSNLEG00000015658) #28	ENSNLEG00000015674 #29	GINS1 (ENSNLEG00000015677) #30	NINL (ENSNLEG00000015689) #31	NANP (ENSNLEG00000015706) #32	ZNF337 (ENSNLEG00000028946) #33	ENSNLEG00000027564 #34	ENSNLEG00000035311 #35	PROKR2 (ENSNLEG00000007731) #36	ENSNLEG00000018558 #37
Hominidae	ANCESTRAL SPECIES	18	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00940000154601.a.b.a.a.b	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33	ENSGT00400000023200	ENSGT00390000000713.h.a.a.a	ENSGT00390000001502	ENSGT00530000064565
Gorilla	MODERN SPECIES	11	ENSGGOG00000040550	FOXA2 (ENSGGOG00000006368)	ENSGGOG00000012539	GZF1 (ENSGGOG00000023248) #11	NAPB (ENSGGOG00000008548) #12	CSTL1 (ENSGGOG00000013172) #13	CST8 (ENSGGOG00000006139) #16	ENSGGOG00000038343	CST9L (ENSGGOG00000015132)	CST9 (ENSGGOG00000009518) #17	CST1 (ENSGGOG00000002786) ##19	CST2 (ENSGGOG00000007675) #19	CST5 (ENSGGOG00000016581) #20	GGTLC1 (ENSGGOG00000027711)	SYNDIG1 (ENSGGOG00000000617) #21	CST7 (ENSGGOG00000001275) #22	APMAP (ENSGGOG00000001278) #23	ACSS1 (ENSGGOG00000001280) #24	VSX1 (ENSGGOG00000001283) #25	ENTPD6 (ENSGGOG00000014904) #26	PYGB (ENSGGOG00000014285) #27	ABHD12 (ENSGGOG00000014299) #28	GINS1 (ENSGGOG00000002473) #30	NINL (ENSGGOG00000002477) #31	NANP (ENSGGOG00000012837) #32	ZNF337 (ENSGGOG00000014016) #33	ENSGGOG00000016857	DEFB115 (ENSGGOG00000024671)	ENSGGOG00000041871	DEFB116 (ENSGGOG00000006237)	DEFB118 (ENSGGOG00000042168)
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00940000154601.a.b.a.a.b	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33	ENSGT00400000023200	ENSGT00390000000713.h.a.a.a	ENSGT00390000001502	ENSGT00530000064565
Pan	ANCESTRAL SPECIES	15	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33	ENSGT00400000023200	ENSGT00390000000713.h.a.a.a	ENSGT00390000001502	ENSGT00530000064565
Bonobo	MODERN SPECIES	11	GZF1 (ENSPPAG00000028487) #11	NAPB (ENSPPAG00000043876) #12	CSTL1 (ENSPPAG00000038564) #13	CST11 (ENSPPAG00000025372) #14	ENSPPAG00000034245 #15	CST8 (ENSPPAG00000037606) #16	ENSPPAG00000039408	ENSPPAG00000035983	CST9L (ENSPPAG00000033681)	CST9 (ENSPPAG00000037364) #17	CST3 (ENSPPAG00000041092) #18	CST4 (ENSPPAG00000035722) ##19	ENSPPAG00000038530 #19	CST5 (ENSPPAG00000030471) #20	SYNDIG1 (ENSPPAG00000030602) #21	CST7 (ENSPPAG00000030321) #22	APMAP (ENSPPAG00000037399) #23	ACSS1 (ENSPPAG00000027610) #24	VSX1 (ENSPPAG00000040169) #25	ENTPD6 (ENSPPAG00000031043) #26	ENSPPAG00000042700	PYGB (ENSPPAG00000034450) #27	ABHD12 (ENSPPAG00000038923) #28	GINS1 (ENSPPAG00000039045) #30	NINL (ENSPPAG00000031856) #31	NANP (ENSPPAG00000022695) #32	ZNF337 (ENSPPAG00000025161) #33	DEFB115 (ENSPPAG00000027269)	ENSPPAG00000027868	DEFB116 (ENSPPAG00000029087)	DEFB118 (ENSPPAG00000029202)
Chimpanzee	MODERN SPECIES	11	CSTL1 (ENSPTRG00000045776) #13	CST11 (ENSPTRG00000013323) #14	ENSPTRG00000045117 #15	CST8 (ENSPTRG00000013324) #16	ENSPTRG00000050976	ENSPTRG00000047084	CST9L (ENSPTRG00000013325)	CST9 (ENSPTRG00000013326) #17	CST3 (ENSPTRG00000046564) #18	CST1 (ENSPTRG00000013329) #19	ENSPTRG00000049771	CST5 (ENSPTRG00000048582) #20	GGTLC1 (ENSPTRG00000013331)	ENSPTRG00000043654	SYNDIG1 (ENSPTRG00000013333) #21	CST7 (ENSPTRG00000013334) #22	APMAP (ENSPTRG00000013335) #23	ACSS1 (ENSPTRG00000013336) #24	VSX1 (ENSPTRG00000013337) #25	ENTPD6 (ENSPTRG00000013338) #26	PYGB (ENSPTRG00000049662) #27	ABHD12 (ENSPTRG00000013340) #28	GINS1 (ENSPTRG00000050964) #30	NINL (ENSPTRG00000013342) #31	NANP (ENSPTRG00000044350) #32	ZNF337 (ENSPTRG00000013344) #33	ENSPTRG00000048366	ENSPTRG00000046023	ENSPTRG00000043123	ENSPTRG00000043041	ENSPTRG00000044519
Human	MODERN SPECIES	12	NXT1 (ENSG00000132661)	GZF1 (ENSG00000125812) #11	NAPB (ENSG00000125814) #12	CSTL1 (ENSG00000125823) #13	CST11 (ENSG00000125831) #14	CST8 (ENSG00000125815) #16	CST9L (ENSG00000101435)	CST9 (ENSG00000173335) #17	CST3 (ENSG00000101439) #18	CST4 (ENSG00000101441) ##19	CST1 (ENSG00000170373) ##19	CST2 (ENSG00000170369) #19	CST5 (ENSG00000170367) #20	GGTLC1 (ENSG00000149435)	SYNDIG1 (ENSG00000101463) #21	CST7 (ENSG00000077984) #22	APMAP (ENSG00000101474) #23	ACSS1 (ENSG00000154930) #24	VSX1 (ENSG00000100987) #25	ENTPD6 (ENSG00000197586) #26	PYGB (ENSG00000100994) #27	ABHD12 (ENSG00000100997) #28	GINS1 (ENSG00000101003) #30	NINL (ENSG00000101004) #31	NANP (ENSG00000170191) #32	ZNF337 (ENSG00000130684) #33	DEFB115 (ENSG00000215547)	DEFB116 (ENSG00000215545)	DEFB118 (ENSG00000131068)	DEFB119 (ENSG00000180483)	DEFB121 (ENSG00000204548)
Orangutan	MODERN SPECIES	11	NAPB (ENSPPYG00000010767) #12	CSTL1 (ENSPPYG00000010768) #13	CST11 (ENSPPYG00000010769) #14	ENSPPYG00000037632 #15	CST8 (ENSPPYG00000010770) #16	ENSPPYG00000010771	ENSPPYG00000010772	CST9L (ENSPPYG00000010773)	CST9 (ENSPPYG00000010775) #17	CST3 (ENSPPYG00000010776) #18	ENSPPYG00000039032 ##19	CST4 (ENSPPYG00000011266) ##19	CST2 (ENSPPYG00000010777) #19	CST5 (ENSPPYG00000037292) #20	SYNDIG1 (ENSPPYG00000010778) #21	CST7 (ENSPPYG00000010779) #22	APMAP (ENSPPYG00000010780) #23	ACSS1 (ENSPPYG00000010781) #24	VSX1 (ENSPPYG00000010782) #25	ENTPD6 (ENSPPYG00000010783) #26	PYGB (ENSPPYG00000010785) #27	ABHD12 (ENSPPYG00000010786) #28	GINS1 (ENSPPYG00000010787) #30	NINL (ENSPPYG00000010788) #31	NANP (ENSPPYG00000040950) #32	ZNF337 (ENSPPYG00000010790) #33	ENSPPYG00000010791	PROKR2 (ENSPPYG00000010792) #36	ENSPPYG00000010793 ##37	CDS2 (ENSPPYG00000010794)	PCNA (ENSPPYG00000010795)
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Rhinopithecus	ANCESTRAL SPECIES	412															ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Golden snub-nosed monkey	MODERN SPECIES	595															SYNDIG1 (ENSRROG00000034113) #21	CST7 (ENSRROG00000035881) #22	APMAP (ENSRROG00000037641) #23	ACSS1 (ENSRROG00000043161) #24	VSX1 (ENSRROG00000044921) #25	ENSRROG00000044632	ENTPD6 (ENSRROG00000031262) #26	PYGB (ENSRROG00000035671) #27	ABHD12 (ENSRROG00000045624) #28	GINS1 (ENSRROG00000036067) #30	NINL (ENSRROG00000036818) #31	NANP (ENSRROG00000042030) #32	ZNF337 (ENSRROG00000037719) #33
Black snub-nosed monkey	MODERN SPECIES	2329															SYNDIG1 (ENSRBIG00000040849) #21	CST7 (ENSRBIG00000037963) #22	APMAP (ENSRBIG00000028571) #23	ACSS1 (ENSRBIG00000035582) #24	VSX1 (ENSRBIG00000032231) #25	ENSRBIG00000037585	ENTPD6 (ENSRBIG00000037558) #26	PYGB (ENSRBIG00000043048) #27	ABHD12 (ENSRBIG00000033301) #28	ENSRBIG00000037880	LRP2BP (ENSRBIG00000036810)	ANKRD37 (ENSRBIG00000030265)	UFSP2 (ENSRBIG00000031222)	C4orf47 (ENSRBIG00000027024)	CCDC110 (ENSRBIG00000032062)	PDLIM3 (ENSRBIG00000027283)	SORBS2 (ENSRBIG00000038356)
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098.a.b #17	ENSGT00940000164098.a.a #17	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000164098.a.a #17	ENSGT00940000163410 #19	ENSGT00940000154755.d #18	ENSGT00860000135650.a	ENSGT00940000164098.a.b #17	ENSGT00940000161877.h	ENSGT00940000166721	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Macaca	ANCESTRAL SPECIES	16	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877.g.b	ENSGT00940000164098.a.a #17	ENSGT00940000163410 #19	ENSGT00860000135650.a	ENSGT00940000154755.d #18	ENSGT00860000135650.b	ENSGT00940000164098.a.b #17	ENSGT00940000161877.g.a	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Pig-tailed macaque	MODERN SPECIES	130	NXT1 (ENSMNEG00000027745)	GZF1 (ENSMNEG00000033117) #11	NAPB (ENSMNEG00000036841) #12	CSTL1 (ENSMNEG00000044944) #13	CST11 (ENSMNEG00000041474) #14	ENSMNEG00000032864 #15	CST8 (ENSMNEG00000037697) #16	CST9 (ENSMNEG00000039807) #17	ENSMNEG00000039062 #19	ENSMNEG00000039431	CST3 (ENSMNEG00000032382) #18	ENSMNEG00000044989	CST9L (ENSMNEG00000032753)	CST5 (ENSMNEG00000039359) #20	SYNDIG1 (ENSMNEG00000029710) #21	CST7 (ENSMNEG00000030455) #22	APMAP (ENSMNEG00000043679) #23	ACSS1 (ENSMNEG00000042557) #24	VSX1 (ENSMNEG00000013966) #25	ENSMNEG00000036046	ENTPD6 (ENSMNEG00000027824) #26	PYGB (ENSMNEG00000035548) #27	ABHD12 (ENSMNEG00000038825) #28	GINS1 (ENSMNEG00000035311) #30	NINL (ENSMNEG00000034434) #31	NANP (ENSMNEG00000038191) #32
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721.a	ENSGT00940000164098.a.a #17	ENSGT00940000163410.d #19	ENSGT00860000135650.a	ENSGT00940000154755.d #18	ENSGT00940000163410.c #19	ENSGT00940000164098.a.b #17	ENSGT00940000161877.g.a	ENSGT00940000161877.g.b	ENSGT00940000166721.b	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01070000254267.b	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820.a #33
Rhesus	MODERN SPECIES	1	CSTL1 (ENSMMUG00000055975) #13	CST11 (ENSMMUG00000022393) #14	ENSMMUG00000016490 #15	CST8 (ENSMMUG00000016489) #16	ENSMMUG00000059402	ENSMMUG00000063687	CST9 (ENSMMUG00000039259) #17	ENSMMUG00000046980 #19	CST3 (ENSMMUG00000050596) #18	ENSMMUG00000050726	ENSMMUG00000063629 #19	CST9L (ENSMMUG00000045312)	ENSMMUG00000003933	CST5 (ENSMMUG00000059092) #20	SYNDIG1 (ENSMMUG00000015852) #21	CST7 (ENSMMUG00000005757) #22	APMAP (ENSMMUG00000061222) #23	ACSS1 (ENSMMUG00000020597) #24	VSX1 (ENSMMUG00000058095) #25	ENSMMUG00000052572	PYGB (ENSMMUG00000009199) #27	ABHD12 (ENSMMUG00000009201) #28	ENSMMUG00000059374	GINS1 (ENSMMUG00000002397) #30	NINL (ENSMMUG00000009953) #31	ENSMMUG00000065032	NANP (ENSMMUG00000020858) #32	ZNF337 (ENSMMUG00000020859) #33	ENSMMUG00000001813	ENSMMUG00000049809	ENSMMUG00000050280
Crab-eating macaque	MODERN SPECIES	1	NAPB (ENSMFAG00000012865) #12	CSTL1 (ENSMFAG00000057818) #13	CST11 (ENSMFAG00000038093) #14	ENSMFAG00000032810 #15	CST8 (ENSMFAG00000033001) #16	ENSMFAG00000061186	ENSMFAG00000055858	ENSMFAG00000051852 #17	ENSMFAG00000001311 #19	CST3 (ENSMFAG00000062094) #18	ENSMFAG00000032358 #19	ENSMFAG00000002225 #17	CST9L (ENSMFAG00000045303)	CST5 (ENSMFAG00000042493) #20	SYNDIG1 (ENSMFAG00000052498) #21	CST7 (ENSMFAG00000003193) #22	APMAP (ENSMFAG00000033103) #23	ACSS1 (ENSMFAG00000003063) #24	VSX1 (ENSMFAG00000043885) #25	ENSMFAG00000048668	ENTPD6 (ENSMFAG00000000133) #26	PYGB (ENSMFAG00000033575) #27	ABHD12 (ENSMFAG00000002681) #28	GINS1 (ENSMFAG00000002736) #30	ENSMFAG00000062076	NINL (ENSMFAG00000036364) #31	NANP (ENSMFAG00000036787) #32	ENSMFAG00000031149 #33	ENSMFAG00000047352	ENSMFAG00000001981	ENSMFAG00000058952
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000164098.a.a #17	ENSGT00940000163410 #19	ENSGT00860000135650.a	ENSGT00940000154755.d #18	ENSGT00940000164098.a.b #17	ENSGT00940000161877.h	ENSGT00940000166721	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Olive baboon	MODERN SPECIES	7	HDHD5 (ENSPANG00000024306)	TMEM121B (ENSPANG00000015715)	ENSPANG00000016404	ENSPANG00000044107	ENSPANG00000050870	ENSPANG00000049477	ENSPANG00000046906	ENSPANG00000050867	ENSPANG00000030853 #17	ENSPANG00000021092 #19	ENSPANG00000000660 #17	ENSPANG00000023845	SYNDIG1 (ENSPANG00000047245) #21	ENSPANG00000048046	APMAP (ENSPANG00000051418) #23	CST7 (ENSPANG00000042634) #22	ACSS1 (ENSPANG00000017910) #24	VSX1 (ENSPANG00000021775) #25	ENTPD6 (ENSPANG00000026175) #26	ENSPANG00000045994	PYGB (ENSPANG00000024585) #27	ABHD12 (ENSPANG00000001312) #28	GINS1 (ENSPANG00000032488) #30	NINL (ENSPANG00000016039) #31	ENSPANG00000044377	NANP (ENSPANG00000031862) #32	ENSPANG00000048820	CD93 (ENSPANG00000018432) #9	THBD (ENSPANG00000046781) #8	SSTR4 (ENSPANG00000004090) #7	ENSPANG00000044373
Cercopithecinae_d	ANCESTRAL SPECIES	2	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000164098.a.a #17	ENSGT00940000154755.d #18	ENSGT00860000135650.a	ENSGT00940000163410 #19	ENSGT00940000164098.a.b #17	ENSGT00940000161877.h	ENSGT00940000166721	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31
Drill	MODERN SPECIES	1583											ENSMLEG00000035691	ENSMLEG00000037193 #17	CST9L (ENSMLEG00000038338)	CST5 (ENSMLEG00000029640) #20	SYNDIG1 (ENSMLEG00000030663) #21	CST7 (ENSMLEG00000035783) #22	APMAP (ENSMLEG00000041061) #23	ACSS1 (ENSMLEG00000029721) #24	VSX1 (ENSMLEG00000002119) #25
Sooty mangabey	MODERN SPECIES	602	NAPB (ENSCATG00000042262) #12	CSTL1 (ENSCATG00000031751) #13	CST11 (ENSCATG00000042927) #14	ENSCATG00000043404 #15	CST8 (ENSCATG00000033479) #16	ENSCATG00000033110 #17	ENSCATG00000043016 #19	CST3 (ENSCATG00000032215) #18	ENSCATG00000036042	ENSCATG00000035785 #19	ENSCATG00000035179 #17	CST9L (ENSCATG00000032932)	ENSCATG00000032535	CST5 (ENSCATG00000032239) #20	SYNDIG1 (ENSCATG00000034882) #21	CST7 (ENSCATG00000043766) #22	APMAP (ENSCATG00000016408) #23	ACSS1 (ENSCATG00000038637) #24	VSX1 (ENSCATG00000037882) #25	ENSCATG00000007149	ENTPD6 (ENSCATG00000031217) #26	PYGB (ENSCATG00000039037) #27	ABHD12 (ENSCATG00000033998) #28	GINS1 (ENSCATG00000035618) #30	NINL (ENSCATG00000024895) #31
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Cebidae	ANCESTRAL SPECIES	13	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00390000016478.i.b	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Marmoset	MODERN SPECIES	17	CD93 (ENSCJAG00000005796) #9	NXT1 (ENSCJAG00000044836)	GZF1 (ENSCJAG00000000733) #11	NAPB (ENSCJAG00000000712) #12	CSTL1 (ENSCJAG00000041540) #13	CST11 (ENSCJAG00000080392) #14	ENSCJAG00000074097 #15	CST8 (ENSCJAG00000000697) #16	ENSCJAG00000078884	CST9 (ENSCJAG00000084681) #17	CST3 (ENSCJAG00000036809) #18	ENSCJAG00000000676 #19	CST5 (ENSCJAG00000037422) #20	SYNDIG1 (ENSCJAG00000046278) #21	APMAP (ENSCJAG00000085161) #23	CST7 (ENSCJAG00000048473) #22	ACSS1 (ENSCJAG00000011837) #24	VSX1 (ENSCJAG00000069727) #25	ENSCJAG00000011698 #27	ABHD12 (ENSCJAG00000011654) #28	GINS1 (ENSCJAG00000011640) #30	NINL (ENSCJAG00000011624) #31	NANP (ENSCJAG00000048461) #32	ZNF337 (ENSCJAG00000011611) #33	RPN2 (ENSCJAG00000021517)	GHRH (ENSCJAG00000021515)	ENSCJAG00000076632	SRC (ENSCJAG00000021512)	BLCAP (ENSCJAG00000048212)	ENSCJAG00000041804	ENSCJAG00000048098
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00390000016478.i.b	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Bolivian squirrel monkey	MODERN SPECIES	211	SSTR4 (ENSSBOG00000013012) #7	CD93 (ENSSBOG00000018965) #9	NXT1 (ENSSBOG00000036378)	GZF1 (ENSSBOG00000018893) #11	NAPB (ENSSBOG00000019980) #12	CSTL1 (ENSSBOG00000006474) #13	CST11 (ENSSBOG00000025613) #14	ENSSBOG00000025115 #15	CST8 (ENSSBOG00000021877) #16	CST9L (ENSSBOG00000020799)	CST9 (ENSSBOG00000020759) #17	CST3 (ENSSBOG00000030007) #18	ENSSBOG00000028716 #19	CST5 (ENSSBOG00000022942) #20	SYNDIG1 (ENSSBOG00000023812) #21	CST7 (ENSSBOG00000021587) #22	APMAP (ENSSBOG00000035251) #23	ACSS1 (ENSSBOG00000031199) #24	ENSSBOG00000025683 #25	ENTPD6 (ENSSBOG00000026749) #26	PYGB (ENSSBOG00000021161) #27	ABHD12 (ENSSBOG00000022490) #28	GINS1 (ENSSBOG00000022068) #30	ENSSBOG00000028297	NINL (ENSSBOG00000025198) #31	NANP (ENSSBOG00000028505) #32	ZNF337 (ENSSBOG00000034901) #33	ENSSBOG00000020085
Capuchin	MODERN SPECIES	134	THBD (ENSCCAG00000020711) #8	CD93 (ENSCCAG00000034013) #9	NXT1 (ENSCCAG00000015478)	GZF1 (ENSCCAG00000035601) #11	NAPB (ENSCCAG00000029344) #12	CSTL1 (ENSCCAG00000033212) #13	CST11 (ENSCCAG00000035766) #14	ENSCCAG00000037786 #15	CST8 (ENSCCAG00000024862) #16	CST9L (ENSCCAG00000026509)	CST9 (ENSCCAG00000024829) #17	CST3 (ENSCCAG00000001843) #18	ENSCCAG00000033223 #19	CST5 (ENSCCAG00000034182) #20	SYNDIG1 (ENSCCAG00000028638) #21	CST7 (ENSCCAG00000027578) #22	APMAP (ENSCCAG00000023838) #23	ACSS1 (ENSCCAG00000037466) #24	ENSCCAG00000033591	VSX1 (ENSCCAG00000015659) #25	ENTPD6 (ENSCCAG00000008076) #26	PYGB (ENSCCAG00000024374) #27	ABHD12 (ENSCCAG00000019845) #28	GINS1 (ENSCCAG00000034779) #30	NINL (ENSCCAG00000033765) #31
Mas night monkey	MODERN SPECIES	1049													CST5 (ENSANAG00000019554) #20	ENSANAG00000031339	SYNDIG1 (ENSANAG00000029055) #21	CST7 (ENSANAG00000028258) #22	APMAP (ENSANAG00000022389) #23	ACSS1 (ENSANAG00000035424) #24	ENSANAG00000026111	VSX1 (ENSANAG00000029622) #25	ENTPD6 (ENSANAG00000022470) #26	PYGB (ENSANAG00000031809) #27	ABHD12 (ENSANAG00000034290) #28	GINS1 (ENSANAG00000019506) #30	NINL (ENSANAG00000029624) #31	ENSANAG00000031273	NANP (ENSANAG00000027665) #32	ZNF337 (ENSANAG00000021202) #33
Tarsier	MODERN SPECIES	6271																CST7 (ENSTSYG00000032741) #22	APMAP (ENSTSYG00000032650) #23	ACSS1 (ENSTSYG00000005675) #24	VSX1 (ENSTSYG00000011433) #25	ENTPD6 (ENSTSYG00000009781) #26	PYGB (ENSTSYG00000033095) #27	ABHD12 (ENSTSYG00000010157) #28	GINS1 (ENSTSYG00000002220) #30	NINL (ENSTSYG00000012921) #31
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00940000164098 #17	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Lemuriformes	ANCESTRAL SPECIES	44	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162294 #16	ENSGT00940000164098 #17	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645	ENSGT00940000156391	ENSGT00940000162580	ENSGT00940000161707.b
Lemuriformes_a	ANCESTRAL SPECIES	115														ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645	ENSGT00940000156391	ENSGT00940000162580	ENSGT00940000161707.b
Coquerels sifaka	MODERN SPECIES	611													ENSPCOG00000021349 #19	SYNDIG1 (ENSPCOG00000003880) #21	ENSPCOG00000023905	CST7 (ENSPCOG00000019725) #22	APMAP (ENSPCOG00000023592) #23	ACSS1 (ENSPCOG00000018745) #24	VSX1 (ENSPCOG00000013919) #25	ENTPD6 (ENSPCOG00000022862) #26	PYGB (ENSPCOG00000021348) #27	ABHD12 (ENSPCOG00000022073) #28	GINS1 (ENSPCOG00000016034) #30	NINL (ENSPCOG00000019338) #31	ENSPCOG00000014381	NANP (ENSPCOG00000022703) #32	HTRA3 (ENSPCOG00000015549)	ACOX3 (ENSPCOG00000015967)	TRMT44 (ENSPCOG00000028809)	CPZ (ENSPCOG00000018885)	HMX1 (ENSPCOG00000019742)
Greater bamboo lemur	MODERN SPECIES	602															SYNDIG1 (ENSPSMG00000010370) #21	CST7 (ENSPSMG00000010357) #22	APMAP (ENSPSMG00000010339) #23	ACSS1 (ENSPSMG00000010324) #24	ENSPSMG00000010300	VSX1 (ENSPSMG00000010286) #25	ENTPD6 (ENSPSMG00000010235) #26	PYGB (ENSPSMG00000009949) #27	ABHD12 (ENSPSMG00000009630) #28	GINS1 (ENSPSMG00000009556) #30	NINL (ENSPSMG00000009545) #31	NANP (ENSPSMG00000009528) #32
Mouse lemur	MODERN SPECIES	9	NKX2-2 (ENSMICG00000045009)	PAX1 (ENSMICG00000016968)	FOXA2 (ENSMICG00000030588)	CD93 (ENSMICG00000017898) #9	NXT1 (ENSMICG00000044853)	GZF1 (ENSMICG00000046070) #11	NAPB (ENSMICG00000017902) #12	CSTL1 (ENSMICG00000017903) #13	CST11 (ENSMICG00000017904) #14	CST8 (ENSMICG00000017905) #16	CST9 (ENSMICG00000047052) #17	ENSMICG00000004617 ##18	ENSMICG00000043235 ##18	ENSMICG00000032368	SYNDIG1 (ENSMICG00000027578) #21	CST7 (ENSMICG00000002037) #22	APMAP (ENSMICG00000002038) #23	ACSS1 (ENSMICG00000002040) #24	VSX1 (ENSMICG00000002047) #25	ENTPD6 (ENSMICG00000005764) #26	PYGB (ENSMICG00000005768) #27	ABHD12 (ENSMICG00000005779) #28	GINS1 (ENSMICG00000037715) #30	NINL (ENSMICG00000005792) #31	NANP (ENSMICG00000027386) #32	HTRA3 (ENSMICG00000030499)	ACOX3 (ENSMICG00000011777)	ENSMICG00000032294	CPZ (ENSMICG00000012180)	HMX1 (ENSMICG00000045196)	ADRA2C (ENSMICG00000036964)
Bushbaby	MODERN SPECIES	312															SYNDIG1 (ENSOGAG00000008495) #21	CST7 (ENSOGAG00000008497) #22	APMAP (ENSOGAG00000002478) #23	ACSS1 (ENSOGAG00000008498) #24	VSX1 (ENSOGAG00000008500) #25	ENTPD6 (ENSOGAG00000025094) #26	PYGB (ENSOGAG00000032919) #27	ABHD12 (ENSOGAG00000008501) #28	GINS1 (ENSOGAG00000006512) #30	NINL (ENSOGAG00000006517) #31	ENSOGAG00000006535 #32	ENSOGAG00000032695	ENSOGAG00000000694	ENSOGAG00000028618	ADAM2 (ENSOGAG00000002056)	IDO1 (ENSOGAG00000012936)	IDO2 (ENSOGAG00000012941)
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Glires	ANCESTRAL SPECIES	17	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000164098 #17	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000161877.c.b	ENSGT00940000164098 #17	ENSGT00940000161877.d	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164901	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517	ENSGT00530000063880.a
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.d	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00960000186656.a.b	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000043445	FOXA2 (ENSHGLG00000048805)	PAX1 (ENSHGLG00000015866)	NKX2-2 (ENSHGLG00000048629)	NKX2-4 (ENSHGLG00000008824)	XRN2 (ENSHGLG00000014831)	KIZ (ENSHGLG00000014057)	ENSHGLG00000037468	ENSHGLG00000016477	ENSHGLG00000047697	ENSHGLG00000013572	ENSHGLG00000035992 ##18	ENSHGLG00000001178 ##18	ENSHGLG00000049828	ENSHGLG00000001156 #21	CST7 (ENSHGLG00000001075) #22	APMAP (ENSHGLG00000045360) #23	ENSHGLG00000042834 #24	ENSHGLG00000034236 #24	ENSHGLG00000039362	ENTPD6 (ENSHGLG00000000193) #26	PYGB (ENSHGLG00000000176) #27	ABHD12 (ENSHGLG00000035916) #28	ENSHGLG00000035611 #30	ENSHGLG00000040387	ENSHGLG00000000136	RASGRF1 (ENSHGLG00000000128)	ENSHGLG00000000119	ENSHGLG00000000106	ENSHGLG00000041324	ENSHGLG00000000301
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.d	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.d ##18	ENSGT00940000154755.c.b.c ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00530000063880.a
Guinea pig	MODERN SPECIES	8	THBD (ENSCPOG00000030575) #8	CD93 (ENSCPOG00000010252) #9	NXT1 (ENSCPOG00000008817)	GZF1 (ENSCPOG00000010790) #11	NAPB (ENSCPOG00000039063) #12	CSTL1 (ENSCPOG00000008734) #13	ENSCPOG00000003822 #14	ENSCPOG00000025993 #15	CST8 (ENSCPOG00000005550) #16	ENSCPOG00000021926	ENSCPOG00000025294	ENSCPOG00000030716 ##18	ENSCPOG00000030984 ##18	ENSCPOG00000026799 ##18	SYNDIG1 (ENSCPOG00000004943) #21	CST7 (ENSCPOG00000008022) #22	APMAP (ENSCPOG00000008131) #23	ACSS1 (ENSCPOG00000021704) #24	VSX1 (ENSCPOG00000003951) #25	ENTPD6 (ENSCPOG00000009587) #26	PYGB (ENSCPOG00000021215) #27	ABHD12 (ENSCPOG00000004078) #28	GINS1 (ENSCPOG00000000260) #30	NINL (ENSCPOG00000005041) #31	NANP (ENSCPOG00000031912) #32	ENSCPOG00000006435	ENSCPOG00000030176	ENSCPOG00000032111	NSFL1C (ENSCPOG00000004012)	ENSCPOG00000032891	SDCBP2 (ENSCPOG00000021957)
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.d ##18	ENSGT00940000154755.c.b.c ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT01030000234638.b.a.a	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000008063	ENSGT01100000263497.E.a.a	ENSGT00390000006806
Degu	MODERN SPECIES	114	PAX1 (ENSODEG00000012427)	FOXA2 (ENSODEG00000011162)	THBD (ENSODEG00000010709) #8	CD93 (ENSODEG00000012518) #9	NXT1 (ENSODEG00000019900)	GZF1 (ENSODEG00000013020) #11	NAPB (ENSODEG00000011065) #12	CSTL1 (ENSODEG00000010719) #13	CST11 (ENSODEG00000013274) #14	ENSODEG00000012595 #15	ENSODEG00000010448 #16	ENSODEG00000010611	CST3 (ENSODEG00000012334) ##18	ENSODEG00000019797	SYNDIG1 (ENSODEG00000012369) #21	CST7 (ENSODEG00000011264) #22	APMAP (ENSODEG00000010678) #23	ACSS1 (ENSODEG00000010733) #24	VSX1 (ENSODEG00000010102) #25	ENTPD6 (ENSODEG00000010721) #26	PYGB (ENSODEG00000011290) #27	ABHD12 (ENSODEG00000013149) #28	GINS1 (ENSODEG00000011331) #30	ENSODEG00000014252 #31	ENSODEG00000012295 #32	ENSODEG00000012183	MAN2B1 (ENSODEG00000010434)	WDR83OS (ENSODEG00000011674)	WDR83 (ENSODEG00000010258)	DHPS (ENSODEG00000010756)	ENSODEG00000011490
Long-tailed chinchilla	MODERN SPECIES	122	PAX1 (ENSCLAG00000016362)	FOXA2 (ENSCLAG00000014548)	THBD (ENSCLAG00000011994) #8	CD93 (ENSCLAG00000012062) #9	NXT1 (ENSCLAG00000012493)	GZF1 (ENSCLAG00000014714) #11	NAPB (ENSCLAG00000011540) #12	CSTL1 (ENSCLAG00000012446) #13	ENSCLAG00000011384 #14	ENSCLAG00000015474 #15	ENSCLAG00000015212 #16	ENSCLAG00000017066	ENSCLAG00000015899 ##18	ENSCLAG00000012454 ##18	SYNDIG1 (ENSCLAG00000012586) #21	CST7 (ENSCLAG00000015428) #22	APMAP (ENSCLAG00000013445) #23	ACSS1 (ENSCLAG00000012190) #24	VSX1 (ENSCLAG00000015160) #25	ENSCLAG00000015639 #26	PYGB (ENSCLAG00000012954) #27	ABHD12 (ENSCLAG00000010950) #28	GINS1 (ENSCLAG00000010830) #30	NINL (ENSCLAG00000011605) #31	NANP (ENSCLAG00000014668) #32	ZNF333 (ENSCLAG00000014959)	MAN2B1 (ENSCLAG00000013086)	ENSCLAG00000011821	WDR83 (ENSCLAG00000012198)	DHPS (ENSCLAG00000012256)	FBXW9 (ENSCLAG00000012587)
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000161877.d	ENSGT00940000161877.c.b	ENSGT00940000164098 #17	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.e ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Marmotini	ANCESTRAL SPECIES	5	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000161877.d	ENSGT00940000161877.c.b	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.e ##18	ENSGT00940000154755.c.b.f ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000154617.B
Marmotini_b	ANCESTRAL SPECIES	140	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000161877.d	ENSGT00940000161877.c.b	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.e ##18	ENSGT00940000154755.c.b.f ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000154617.B
Squirrel	MODERN SPECIES	220	NAPB (ENSSTOG00000022350) #12	CSTL1 (ENSSTOG00000024563) #13	CST11 (ENSSTOG00000004847) #14	ENSSTOG00000021841 ##15	ENSSTOG00000024532 #15	CST8 (ENSSTOG00000004122) #16	ENSSTOG00000020102	ENSSTOG00000004129	ENSSTOG00000028869	ENSSTOG00000015564	ENSSTOG00000026963 ##18	ENSSTOG00000023496	ENSSTOG00000001311 ##18	ENSSTOG00000001243 ##18	SYNDIG1 (ENSSTOG00000021952) #21	CST7 (ENSSTOG00000005896) #22	APMAP (ENSSTOG00000005903) #23	ACSS1 (ENSSTOG00000005944) #24	VSX1 (ENSSTOG00000026010) #25	ENTPD6 (ENSSTOG00000006956) #26	PYGB (ENSSTOG00000014388) #27	ABHD12 (ENSSTOG00000014396) #28	GINS1 (ENSSTOG00000014406) #30	NINL (ENSSTOG00000014411) #31	NANP (ENSSTOG00000002050) #32
Arctic ground squirrel	MODERN SPECIES	114	ENSUPAG00010009850	ENSUPAG00010009855	CSTL1 (ENSUPAG00010009856) #13	CST11 (ENSUPAG00010009858) #14	ENSUPAG00010009872 ##15	ENSUPAG00010009878 #15	CST8 (ENSUPAG00010009884) #16	ENSUPAG00010009895	ENSUPAG00010009902	ENSUPAG00010009918	ENSUPAG00010009934 ##18	ENSUPAG00010009938 ##18	ENSUPAG00010009978 ##18	SYNDIG1 (ENSUPAG00010009998) #21	ENSUPAG00010010012	CST7 (ENSUPAG00010010018) #22	APMAP (ENSUPAG00010010025) #23	ACSS1 (ENSUPAG00010010043) #24	ENSUPAG00010010076	VSX1 (ENSUPAG00010010081) #25	ENTPD6 (ENSUPAG00010010093) #26	PYGB (ENSUPAG00010010109) #27	ABHD12 (ENSUPAG00010010127) #28	GINS1 (ENSUPAG00010010140) #30	NINL (ENSUPAG00010010146) #31	NANP (ENSUPAG00010010172) #32	CHRNA7 (ENSUPAG00010010177)
Alpin marmot	MODERN SPECIES	33																CST7 (ENSMMMG00000021618) #22	APMAP (ENSMMMG00000021607) #23	ACSS1 (ENSMMMG00000021594) #24	VSX1 (ENSMMMG00000021586) #25	ENTPD6 (ENSMMMG00000021571) #26	PYGB (ENSMMMG00000021556) #27	ABHD12 (ENSMMMG00000021545) #28	GINS1 (ENSMMMG00000021538) #30	NINL (ENSMMMG00000021519) #31	ENSMMMG00000021516	NANP (ENSMMMG00000021513) #32	CHRNA7 (ENSMMMG00000021504)	ENSMMMG00000021501	OTUD7A (ENSMMMG00000021494)	ENSMMMG00000021489	ENSMMMG00000021473
Eurasian red squirrel	MODERN SPECIES	11	NAPB (ENSSVLG00005000227) #12	CSTL1 (ENSSVLG00005000168) #13	CST11 (ENSSVLG00005000162) #14	ENSSVLG00005000139 ##15	ENSSVLG00005000133 #15	CST8 (ENSSVLG00005000126) #16	ENSSVLG00005012871	ENSSVLG00005012823	ENSSVLG00005012749	ENSSVLG00005012678 #17	ENSSVLG00005012635 ##18	ENSSVLG00005012618	ENSSVLG00005012569 ##18	ENSSVLG00005012499 ##18	SYNDIG1 (ENSSVLG00005012463) #21	CST7 (ENSSVLG00005012392) #22	APMAP (ENSSVLG00005012325) #23	ACSS1 (ENSSVLG00005012262) #24	ENSSVLG00005012189	VSX1 (ENSSVLG00005012048) #25	PYGB (ENSSVLG00005011885) #27	ABHD12 (ENSSVLG00005011759) #28	GINS1 (ENSSVLG00005011707) #30	NINL (ENSSVLG00005011654) #31	NANP (ENSSVLG00005011598) #32	ARL2BP (ENSSVLG00005011550)	ENSSVLG00005011535	CTXND1 (ENSSVLG00005011512)	ARNT2 (ENSSVLG00005011111)	ENSSVLG00005011041	ABHD17C (ENSSVLG00005010975)
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.b.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.b.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Chinese hamster chok1gshd	MODERN SPECIES	188	Napb (ENSCGRG00001015884) #12	Cstl1 (ENSCGRG00001006313) #13	Cst11 (ENSCGRG00001004859) #14	Cstdc1 (ENSCGRG00001024407) ##15	Cst12 (ENSCGRG00001024036) #15	Cst8 (ENSCGRG00001020750) #16	Cst13 (ENSCGRG00001024079)	ENSCGRG00001017812	ENSCGRG00001014456	ENSCGRG00001020338	ENSCGRG00001017333 ##18	Cst10 (ENSCGRG00001015577) ##18	ENSCGRG00001019793	Syndig1 (ENSCGRG00001019306) #21	ENSCGRG00001015934	Cst7 (ENSCGRG00001014715) #22	Apmap (ENSCGRG00001000472) #23	Acss1 (ENSCGRG00001016253) #24	Vsx1 (ENSCGRG00001021064) #25	Entpd6 (ENSCGRG00001018431) #26	Pygb (ENSCGRG00001023540) #27	Abhd12 (ENSCGRG00001013771) #28	Gins1 (ENSCGRG00001011595) #30	ENSCGRG00001000897	Ninl (ENSCGRG00001000443) #31	Nanp (ENSCGRG00001002985) #32	ENSCGRG00001011715	Nsfl1c (ENSCGRG00001016159)	Fkbp1a (ENSCGRG00001006692)	Sdcbp2 (ENSCGRG00001000837)	Snph (ENSCGRG00001023538)
Golden Hamster	MODERN SPECIES	650	Foxa2 (ENSMAUG00000016457)	Sstr4 (ENSMAUG00000008430) #7	Cd93 (ENSMAUG00000019441) #9	Nxt1 (ENSMAUG00000004141)	Gzf1 (ENSMAUG00000019656) #11	Napb (ENSMAUG00000018004) #12	Cst12 (ENSMAUG00000010970) #15	Cst13 (ENSMAUG00000021851)	Cst9 (ENSMAUG00000012174)	Cstdc2 (ENSMAUG00000014409)	Cst3 (ENSMAUG00000012476) ##18	Cst10 (ENSMAUG00000020427) ##18	ENSMAUG00000013001	Syndig1 (ENSMAUG00000012485) #21	1810024B03Rik (ENSMAUG00000019265)	Cst7 (ENSMAUG00000006797) #22	Apmap (ENSMAUG00000022255) #23	Acss1 (ENSMAUG00000016079) #24	Vsx1 (ENSMAUG00000011376) #25	Entpd6 (ENSMAUG00000001297) #26	Pygb (ENSMAUG00000017595) #27	Abhd12 (ENSMAUG00000008947) #28	Gins1 (ENSMAUG00000007925) #30	Ninl (ENSMAUG00000021812) #31	Nanp (ENSMAUG00000005527) #32	ENSMAUG00000017073	Nsfl1c (ENSMAUG00000010106)	ENSMAUG00000010062	Sdcbp2 (ENSMAUG00000016605)	Snph (ENSMAUG00000017593)	ENSMAUG00000014672
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.b.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Prairie vole	MODERN SPECIES	183												Cst10 (ENSMOCG00000001615) ##18	ENSMOCG00000013859	Syndig1 (ENSMOCG00000000664) #21	1810024B03Rik (ENSMOCG00000000132)	Cst7 (ENSMOCG00000004809) #22	Apmap (ENSMOCG00000012045) #23	Acss1 (ENSMOCG00000017761) #24	Vsx1 (ENSMOCG00000004010) #25	Entpd6 (ENSMOCG00000010755) #26	Pygb (ENSMOCG00000000113) #27	Abhd12 (ENSMOCG00000003134) #28	Gins1 (ENSMOCG00000010221) #30	ENSMOCG00000009484 #31	ENSMOCG00000001430 #32
Northern American deer mouse	MODERN SPECIES	17	Nxt1 (ENSPEMG00000010397)	Gzf1 (ENSPEMG00000011285) #11	Napb (ENSPEMG00000014658) #12	Cstl1 (ENSPEMG00000015396) #13	Cst11 (ENSPEMG00000000143) #14	Cstdc1 (ENSPEMG00000018705) ##15	Cst12 (ENSPEMG00000000557) #15	Cst8 (ENSPEMG00000030932) #16	Cst13 (ENSPEMG00000005338)	Cst9 (ENSPEMG00000020106)	Cst3 (ENSPEMG00000019347) ##18	ENSPEMG00000028985 ##18	ENSPEMG00000025257	Cst10 (ENSPEMG00000018501) ##18	Syndig1 (ENSPEMG00000002878) #21	Cst7 (ENSPEMG00000001829) #22	Apmap (ENSPEMG00000013192) #23	Acss1 (ENSPEMG00000014809) #24	Vsx1 (ENSPEMG00000016349) #25	Entpd6 (ENSPEMG00000011143) #26	Pygb (ENSPEMG00000016365) #27	Abhd12 (ENSPEMG00000023436) #28	Gins1 (ENSPEMG00000013343) #30	Ninl (ENSPEMG00000011872) #31	Nanp (ENSPEMG00000029409) #32	Nsfl1c (ENSPEMG00000023871)	Fkbp1a (ENSPEMG00000028282)	Sdcbp2 (ENSPEMG00000017701)	Snph (ENSPEMG00000023065)	Rad21l (ENSPEMG00000023240)	Tmem74bos (ENSPEMG00000024790)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Mus	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Mus_A	ANCESTRAL SPECIES		ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000172008	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000153805.q.b.a.a.a.b.a	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Mouse	MODERN SPECIES	11	Cst13 (ENSMUSG00000036924)	Cst9 (ENSMUSG00000027445)	Cstdc2 (ENSMUSG00000027446)	Cst3 (ENSMUSG00000027447) ##18	Gm1330 (ENSMUSG00000063507)	Cst10 (ENSMUSG00000033156) ##18	Syndig1 (ENSMUSG00000074736) #21	Zfp120 (ENSMUSG00000068134)	Gm14139 (ENSMUSG00000079009)	Zfp937 (ENSMUSG00000060336)	Gm14124 (ENSMUSG00000079008)	3300002I08Rik (ENSMUSG00000063364)	Gm10130 (ENSMUSG00000095315)	Zfp442 (ENSMUSG00000068130)	Zfp345 (ENSMUSG00000074731)	Cst7 (ENSMUSG00000068129) #22	Apmap (ENSMUSG00000033096) #23	Acss1 (ENSMUSG00000027452) #24	Vsx1 (ENSMUSG00000033080) #25	Entpd6 (ENSMUSG00000033068) #26	Pygb (ENSMUSG00000033059) #27	Abhd12 (ENSMUSG00000032046) #28	Gins1 (ENSMUSG00000027454) #30	Ninl (ENSMUSG00000068115) #31	Nanp (ENSMUSG00000053916) #32	Gm14151 (ENSMUSG00000079006)	Gm14147 (ENSMUSG00000079005)	4921509C19Rik (ENSMUSG00000061525)	Nsfl1c (ENSMUSG00000027455)	Fkbp1a (ENSMUSG00000032966)	Sdcbp2 (ENSMUSG00000027456)
Mus_C	ANCESTRAL SPECIES		ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000172008	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000153805.q.b.a.a.a.b.a	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
spretus	MODERN SPECIES	11	Napb (MGP_SPRETEiJ_G0025328) #12	Cstl1 (MGP_SPRETEiJ_G0025329) #13	Cst11 (MGP_SPRETEiJ_G0025330) #14	Cstdc1 (MGP_SPRETEiJ_G0025331) ##15	Cst12 (MGP_SPRETEiJ_G0025332) #15	Cst8 (MGP_SPRETEiJ_G0025333) #16	Cst13 (MGP_SPRETEiJ_G0025334)	Cst9 (MGP_SPRETEiJ_G0025335)	Cstdc2 (MGP_SPRETEiJ_G0025336)	Cst3 (MGP_SPRETEiJ_G0025337) ##18	MGP_SPRETEiJ_G0025338	Cst10 (MGP_SPRETEiJ_G0025339) ##18	Syndig1 (MGP_SPRETEiJ_G0025340) #21	MGP_SPRETEiJ_G0025341	Zfp120 (MGP_SPRETEiJ_G0025342)	Cst7 (MGP_SPRETEiJ_G0025343) #22	Apmap (MGP_SPRETEiJ_G0025344) #23	Acss1 (MGP_SPRETEiJ_G0025345) #24	Vsx1 (MGP_SPRETEiJ_G0025346) #25	Entpd6 (MGP_SPRETEiJ_G0025347) #26	Pygb (MGP_SPRETEiJ_G0025348) #27	Abhd12 (MGP_SPRETEiJ_G0025349) #28	Gins1 (MGP_SPRETEiJ_G0025350) #30	Ninl (MGP_SPRETEiJ_G0025351) #31	MGP_SPRETEiJ_G0025352 #32	MGP_SPRETEiJ_G0025353 #32	Nsfl1c (MGP_SPRETEiJ_G0025355)	MGP_SPRETEiJ_G0025356	Sdcbp2 (MGP_SPRETEiJ_G0025357)	Snph (MGP_SPRETEiJ_G0025358)	Rad21l (MGP_SPRETEiJ_G0025359)
Steppe mouse	MODERN SPECIES	123																ENSMSIG00000000728 #22	Apmap (ENSMSIG00000000755) #23	Acss1 (ENSMSIG00000000805) #24	Vsx1 (ENSMSIG00000000862) #25	Entpd6 (ENSMSIG00000000878) #26	Pygb (ENSMSIG00000000916) #27	Abhd12 (ENSMSIG00000001029) #28	Gins1 (ENSMSIG00000001076) #30	Ninl (ENSMSIG00000001119) #31	Nanp (ENSMSIG00000001191) #32
Ryukyu mouse	MODERN SPECIES	11	Nxt1 (MGP_CAROLIEiJ_G0024408)	Gzf1 (MGP_CAROLIEiJ_G0024409) #11	Napb (MGP_CAROLIEiJ_G0024410) #12	Cstl1 (MGP_CAROLIEiJ_G0024411) #13	Cst11 (MGP_CAROLIEiJ_G0024412) #14	Cstdc1 (MGP_CAROLIEiJ_G0024413) ##15	Cst12 (MGP_CAROLIEiJ_G0024414) #15	Cst8 (MGP_CAROLIEiJ_G0024415) #16	Cst13 (MGP_CAROLIEiJ_G0024416)	Cst9 (MGP_CAROLIEiJ_G0024417)	Cstdc2 (MGP_CAROLIEiJ_G0024418)	Cst3 (MGP_CAROLIEiJ_G0024419) ##18	Cst10 (MGP_CAROLIEiJ_G0024420) ##18	Syndig1 (MGP_CAROLIEiJ_G0024421) #21	MGP_CAROLIEiJ_G0024422	Cst7 (MGP_CAROLIEiJ_G0024423) #22	Apmap (MGP_CAROLIEiJ_G0024424) #23	Acss1 (MGP_CAROLIEiJ_G0024425) #24	Vsx1 (MGP_CAROLIEiJ_G0024426) #25	Entpd6 (MGP_CAROLIEiJ_G0024427) #26	Pygb (MGP_CAROLIEiJ_G0024428) #27	Abhd12 (MGP_CAROLIEiJ_G0024429) #28	MGP_CAROLIEiJ_G0024430 #30	Ninl (MGP_CAROLIEiJ_G0024431) #31	MGP_CAROLIEiJ_G0024432 #32	MGP_CAROLIEiJ_G0024433 #32	Nsfl1c (MGP_CAROLIEiJ_G0024434)	MGP_CAROLIEiJ_G0024435	Sdcbp2 (MGP_CAROLIEiJ_G0024436)	Snph (MGP_CAROLIEiJ_G0024437)	Rad21l (MGP_CAROLIEiJ_G0024438)
Shrew mouse	MODERN SPECIES	16	Nxt1 (MGP_PahariEiJ_G0025851)	Gzf1 (MGP_PahariEiJ_G0025852) #11	Napb (MGP_PahariEiJ_G0025853) #12	Cstl1 (MGP_PahariEiJ_G0025854) #13	Cst11 (MGP_PahariEiJ_G0025855) #14	Cstdc1 (MGP_PahariEiJ_G0025856) ##15	Cst12 (MGP_PahariEiJ_G0025857) #15	Cst8 (MGP_PahariEiJ_G0025858) #16	Cst13 (MGP_PahariEiJ_G0025859)	Cstdc2 (MGP_PahariEiJ_G0025860)	Cst3 (MGP_PahariEiJ_G0025861) ##18	Cst10 (MGP_PahariEiJ_G0025862) ##18	Syndig1 (MGP_PahariEiJ_G0025863) #21	MGP_PahariEiJ_G0025864	MGP_PahariEiJ_G0025865	Cst7 (MGP_PahariEiJ_G0025866) #22	Apmap (MGP_PahariEiJ_G0025867) #23	Acss1 (MGP_PahariEiJ_G0025868) #24	Vsx1 (MGP_PahariEiJ_G0025869) #25	Entpd6 (MGP_PahariEiJ_G0025870) #26	Pygb (MGP_PahariEiJ_G0025871) #27	Abhd12 (MGP_PahariEiJ_G0025872) #28	Gins1 (MGP_PahariEiJ_G0025873) #30	Ninl (MGP_PahariEiJ_G0025874) #31	MGP_PahariEiJ_G0025875 #32	MGP_PahariEiJ_G0025876 #32	Nsfl1c (MGP_PahariEiJ_G0025877)	MGP_PahariEiJ_G0025878	Sdcbp2 (MGP_PahariEiJ_G0025879)	Snph (MGP_PahariEiJ_G0025880)	Rad21l (MGP_PahariEiJ_G0025881)
Rat	MODERN SPECIES	13	AABR07027267.1 (ENSRNOG00000060618)	ENSRNOG00000070080	LOC100911984 (ENSRNOG00000064299)	LOC100362296 (ENSRNOG00000065228)	LOC102555578 (ENSRNOG00000065847)	LOC102555217 (ENSRNOG00000065630)	Rnaset2-ps1 (ENSRNOG00000005920)	LOC102555033 (ENSRNOG00000067040)	LOC102554315 (ENSRNOG00000067071)	AABR07054262.1 (ENSRNOG00000056526)	LOC102549291 (ENSRNOG00000069811)	ENSRNOG00000070867	ENSRNOG00000064151	LOC103690174 (ENSRNOG00000068068)	RGD1565143 (ENSRNOG00000055769)	Cst7 (ENSRNOG00000006767) #22	Apmap (ENSRNOG00000006795) #23	Acss1 (ENSRNOG00000007102) #24	Vsx1 (ENSRNOG00000042220) #25	Entpd6 (ENSRNOG00000007427) #26	Pygb (ENSRNOG00000007583) #27	Abhd12 (ENSRNOG00000036934) #28	Gins1 (ENSRNOG00000008091) #30	Ninl (ENSRNOG00000027747) #31	Nanp (ENSRNOG00000008307) #32	Nsfl1c (ENSRNOG00000008604)	Fkbp1a (ENSRNOG00000008822)	Sdcbp2 (ENSRNOG00000009528)	Snph (ENSRNOG00000009588)	Rad21l1 (ENSRNOG00000022335)	Tmem74b (ENSRNOG00000064442)
Upper Galilee mountains blind mole rat	MODERN SPECIES	689							Cst13 (ENSNGAG00000021135)	Cstdc2 (ENSNGAG00000020593)	Cst3 (ENSNGAG00000017018) ##18	Cst10 (ENSNGAG00000009191) ##18	Syndig1 (ENSNGAG00000006291) #21	Defb21 (ENSNGAG00000003549)	Defb19 (ENSNGAG00000001384)	ENSNGAG00000018092	Bpifb5 (ENSNGAG00000020339)	Cst7 (ENSNGAG00000014555) #22
Lesser Egyptian jerboa	MODERN SPECIES	149	Csnk2a1 (ENSJJAG00000012588)	Tcf15 (ENSJJAG00000010988)	Srxn1 (ENSJJAG00000009121)	Scrt2 (ENSJJAG00000001388)	Slc52a3 (ENSJJAG00000016352)	Fam110a (ENSJJAG00000004311)	Angpt4 (ENSJJAG00000005709)	Rspo4 (ENSJJAG00000018321)	ENSJJAG00000003196	Psmf1 (ENSJJAG00000013803)	Rad21l (ENSJJAG00000018022)	Snph (ENSJJAG00000009948)	Sdcbp2 (ENSJJAG00000022024)	ENSJJAG00000020158	Nsfl1c (ENSJJAG00000019288)	Cst7 (ENSJJAG00000015302) #22	Apmap (ENSJJAG00000012447) #23	Acss1 (ENSJJAG00000024008) #24	Vsx1 (ENSJJAG00000021822) #25	Entpd6 (ENSJJAG00000015511) #26	ENSJJAG00000010262	Pygb (ENSJJAG00000023294) #27	Abhd12 (ENSJJAG00000021468) #28	Gins1 (ENSJJAG00000016065) #30	ENSJJAG00000009691 #31	ENSJJAG00000021010 #31	ENSJJAG00000020337 #31	Nanp (ENSJJAG00000016600) #32	Syndig1 (ENSJJAG00000016150) #21
Kangaroo rat	MODERN SPECIES	418	Nkx2-4 (ENSDORG00000023542)	Nkx2-2 (ENSDORG00000007972)	Pax1 (ENSDORG00000016051)	Foxa2 (ENSDORG00000027269)	Sstr4 (ENSDORG00000010486) #7	Cd93 (ENSDORG00000028704) #9	Nxt1 (ENSDORG00000024690)	Gzf1 (ENSDORG00000011855) #11	Napb (ENSDORG00000011856) #12	Cst12 (ENSDORG00000023744) #15	Cst8 (ENSDORG00000011859) #16	Cst13 (ENSDORG00000027228)	Cst3 (ENSDORG00000027673) ##18	ENSDORG00000008948 ##18	Syndig1 (ENSDORG00000003111) #21	Cst7 (ENSDORG00000005298) #22	Apmap (ENSDORG00000025391) #23	Acss1 (ENSDORG00000004006) #24	Vsx1 (ENSDORG00000005490) #25	Entpd6 (ENSDORG00000007175) #26	Pygb (ENSDORG00000007176) #27	Abhd12 (ENSDORG00000007179) #28	ENSDORG00000010384 #30	Ninl (ENSDORG00000010386) #31	Nanp (ENSDORG00000029868) #32	ENSDORG00000005832	Mlh1 (ENSDORG00000005831)	Epm2aip1 (ENSDORG00000027253)	Trank1 (ENSDORG00000013295)	Dclk3 (ENSDORG00000029566)	Stac (ENSDORG00000005193)
Lagomorpha	ANCESTRAL SPECIES	248															ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Pika	MODERN SPECIES	4000																ENSOPRG00000009654 #22	APMAP (ENSOPRG00000009670) #23	ACSS1 (ENSOPRG00000009689) #24
Rabbit	MODERN SPECIES	474														ENSOCUG00000026879	SYNDIG1 (ENSOCUG00000025498) #21	CST7 (ENSOCUG00000025268) #22	APMAP (ENSOCUG00000027493) #23	ACSS1 (ENSOCUG00000013125) #24	ENTPD6 (ENSOCUG00000015930) #26	PYGB (ENSOCUG00000002790) #27	ENSOCUG00000030064	ABHD12 (ENSOCUG00000002798) #28	ENSOCUG00000015747 #30	NINL (ENSOCUG00000006288) #31	NANP (ENSOCUG00000002927) #32	ENSOCUG00000024869	ENSOCUG00000029482	ORYCUNV1R1534 (ENSOCUG00000030661)	ENSOCUG00000039676	ENSOCUG00000039655	ORYCUNV1R1596 (ENSOCUG00000038955)