Mammalia	ANCESTRAL SPECIES	22	ENSGT00940000162552	ENSGT00950000183139.A	ENSGT00390000010121	ENSGT00670000098098	ENSGT00940000162247	ENSGT00940000159727	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000166261	ENSGT00940000156996 #9	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183132.B	ENSGT00940000164409	ENSGT00940000174607	ENSGT00940000161907	ENSGT01030000234543.E	ENSGT00940000157396
Theria	ANCESTRAL SPECIES	13	ENSGT00950000183139.A	ENSGT00390000010121	ENSGT00670000098098	ENSGT00940000162247	ENSGT00940000159727	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00940000163249	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183132.B	ENSGT00940000164409	ENSGT00940000174607	ENSGT00940000161907	ENSGT01030000234543.E	ENSGT00940000157396
Eutheria	ANCESTRAL SPECIES	11	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Primates	ANCESTRAL SPECIES	17	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00860000135650	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Gibbon	MODERN SPECIES	3	SSTR4 (ENSNLEG00000018627) #7	THBD (ENSNLEG00000011558) #8	CD93 (ENSNLEG00000011559) #9	ENSNLEG00000033556 #10	GZF1 (ENSNLEG00000011565) #11	NAPB (ENSNLEG00000027099) #12	CSTL1 (ENSNLEG00000011597) #13	CST11 (ENSNLEG00000011603) #14	ENSNLEG00000033018 #15	CST8 (ENSNLEG00000011607) #16	CST9 (ENSNLEG00000011616) #17	CST3 (ENSNLEG00000035405) #18	CST2 (ENSNLEG00000036132) #19	CST5 (ENSNLEG00000015517) #20	SYNDIG1 (ENSNLEG00000015521) #21	CST7 (ENSNLEG00000015525) #22	APMAP (ENSNLEG00000032557) #23	ACSS1 (ENSNLEG00000015554) #24	ENSNLEG00000015558 #25	ENTPD6 (ENSNLEG00000015563) #26	PYGB (ENSNLEG00000015641) #27	ABHD12 (ENSNLEG00000015658) #28	ENSNLEG00000015674 #29	GINS1 (ENSNLEG00000015677) #30	NINL (ENSNLEG00000015689) #31	NANP (ENSNLEG00000015706) #32	ZNF337 (ENSNLEG00000028946) #33	ENSNLEG00000027564 #34	ENSNLEG00000035311 #35	PROKR2 (ENSNLEG00000007731) #36	ENSNLEG00000018558 #37
Hominidae	ANCESTRAL SPECIES	18	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00940000154601.a.b.a.a.b	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33	ENSGT00400000023200	ENSGT00390000000713.h.a.a.a	ENSGT00390000001502	ENSGT00530000064565
Gorilla	MODERN SPECIES	11	ENSGGOG00000040550	FOXA2 (ENSGGOG00000006368)	ENSGGOG00000012539	GZF1 (ENSGGOG00000023248) #11	NAPB (ENSGGOG00000008548) #12	CSTL1 (ENSGGOG00000013172) #13	CST8 (ENSGGOG00000006139) #16	ENSGGOG00000038343	CST9L (ENSGGOG00000015132)	CST9 (ENSGGOG00000009518) #17	CST1 (ENSGGOG00000002786) ##19	CST2 (ENSGGOG00000007675) #19	CST5 (ENSGGOG00000016581) #20	GGTLC1 (ENSGGOG00000027711)	SYNDIG1 (ENSGGOG00000000617) #21	CST7 (ENSGGOG00000001275) #22	APMAP (ENSGGOG00000001278) #23	ACSS1 (ENSGGOG00000001280) #24	VSX1 (ENSGGOG00000001283) #25	ENTPD6 (ENSGGOG00000014904) #26	PYGB (ENSGGOG00000014285) #27	ABHD12 (ENSGGOG00000014299) #28	GINS1 (ENSGGOG00000002473) #30	NINL (ENSGGOG00000002477) #31	NANP (ENSGGOG00000012837) #32	ZNF337 (ENSGGOG00000014016) #33	ENSGGOG00000016857	DEFB115 (ENSGGOG00000024671)	ENSGGOG00000041871	DEFB116 (ENSGGOG00000006237)	DEFB118 (ENSGGOG00000042168)
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00940000154601.a.b.a.a.b	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33	ENSGT00400000023200	ENSGT00390000000713.h.a.a.a	ENSGT00390000001502	ENSGT00530000064565
Pan	ANCESTRAL SPECIES	15	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410.a.b.a ##19	ENSGT00860000135650	ENSGT00940000163410.a.a #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33	ENSGT00400000023200	ENSGT00390000000713.h.a.a.a	ENSGT00390000001502	ENSGT00530000064565
Bonobo	MODERN SPECIES	11	GZF1 (ENSPPAG00000028487) #11	NAPB (ENSPPAG00000043876) #12	CSTL1 (ENSPPAG00000038564) #13	CST11 (ENSPPAG00000025372) #14	ENSPPAG00000034245 #15	CST8 (ENSPPAG00000037606) #16	ENSPPAG00000039408	ENSPPAG00000035983	CST9L (ENSPPAG00000033681)	CST9 (ENSPPAG00000037364) #17	CST3 (ENSPPAG00000041092) #18	CST4 (ENSPPAG00000035722) ##19	ENSPPAG00000038530 #19	CST5 (ENSPPAG00000030471) #20	SYNDIG1 (ENSPPAG00000030602) #21	CST7 (ENSPPAG00000030321) #22	APMAP (ENSPPAG00000037399) #23	ACSS1 (ENSPPAG00000027610) #24	VSX1 (ENSPPAG00000040169) #25	ENTPD6 (ENSPPAG00000031043) #26	ENSPPAG00000042700	PYGB (ENSPPAG00000034450) #27	ABHD12 (ENSPPAG00000038923) #28	GINS1 (ENSPPAG00000039045) #30	NINL (ENSPPAG00000031856) #31	NANP (ENSPPAG00000022695) #32	ZNF337 (ENSPPAG00000025161) #33	DEFB115 (ENSPPAG00000027269)	ENSPPAG00000027868	DEFB116 (ENSPPAG00000029087)	DEFB118 (ENSPPAG00000029202)
Chimpanzee	MODERN SPECIES	11	CSTL1 (ENSPTRG00000045776) #13	CST11 (ENSPTRG00000013323) #14	ENSPTRG00000045117 #15	CST8 (ENSPTRG00000013324) #16	ENSPTRG00000050976	ENSPTRG00000047084	CST9L (ENSPTRG00000013325)	CST9 (ENSPTRG00000013326) #17	CST3 (ENSPTRG00000046564) #18	CST1 (ENSPTRG00000013329) #19	ENSPTRG00000049771	CST5 (ENSPTRG00000048582) #20	GGTLC1 (ENSPTRG00000013331)	ENSPTRG00000043654	SYNDIG1 (ENSPTRG00000013333) #21	CST7 (ENSPTRG00000013334) #22	APMAP (ENSPTRG00000013335) #23	ACSS1 (ENSPTRG00000013336) #24	VSX1 (ENSPTRG00000013337) #25	ENTPD6 (ENSPTRG00000013338) #26	PYGB (ENSPTRG00000049662) #27	ABHD12 (ENSPTRG00000013340) #28	GINS1 (ENSPTRG00000050964) #30	NINL (ENSPTRG00000013342) #31	NANP (ENSPTRG00000044350) #32	ZNF337 (ENSPTRG00000013344) #33	ENSPTRG00000048366	ENSPTRG00000046023	ENSPTRG00000043123	ENSPTRG00000043041	ENSPTRG00000044519
Human	MODERN SPECIES	12	NXT1 (ENSG00000132661)	GZF1 (ENSG00000125812) #11	NAPB (ENSG00000125814) #12	CSTL1 (ENSG00000125823) #13	CST11 (ENSG00000125831) #14	CST8 (ENSG00000125815) #16	CST9L (ENSG00000101435)	CST9 (ENSG00000173335) #17	CST3 (ENSG00000101439) #18	CST4 (ENSG00000101441) ##19	CST1 (ENSG00000170373) ##19	CST2 (ENSG00000170369) #19	CST5 (ENSG00000170367) #20	GGTLC1 (ENSG00000149435)	SYNDIG1 (ENSG00000101463) #21	CST7 (ENSG00000077984) #22	APMAP (ENSG00000101474) #23	ACSS1 (ENSG00000154930) #24	VSX1 (ENSG00000100987) #25	ENTPD6 (ENSG00000197586) #26	PYGB (ENSG00000100994) #27	ABHD12 (ENSG00000100997) #28	GINS1 (ENSG00000101003) #30	NINL (ENSG00000101004) #31	NANP (ENSG00000170191) #32	ZNF337 (ENSG00000130684) #33	DEFB115 (ENSG00000215547)	DEFB116 (ENSG00000215545)	DEFB118 (ENSG00000131068)	DEFB119 (ENSG00000180483)	DEFB121 (ENSG00000204548)
Orangutan	MODERN SPECIES	11	NAPB (ENSPPYG00000010767) #12	CSTL1 (ENSPPYG00000010768) #13	CST11 (ENSPPYG00000010769) #14	ENSPPYG00000037632 #15	CST8 (ENSPPYG00000010770) #16	ENSPPYG00000010771	ENSPPYG00000010772	CST9L (ENSPPYG00000010773)	CST9 (ENSPPYG00000010775) #17	CST3 (ENSPPYG00000010776) #18	ENSPPYG00000039032 ##19	CST4 (ENSPPYG00000011266) ##19	CST2 (ENSPPYG00000010777) #19	CST5 (ENSPPYG00000037292) #20	SYNDIG1 (ENSPPYG00000010778) #21	CST7 (ENSPPYG00000010779) #22	APMAP (ENSPPYG00000010780) #23	ACSS1 (ENSPPYG00000010781) #24	VSX1 (ENSPPYG00000010782) #25	ENTPD6 (ENSPPYG00000010783) #26	PYGB (ENSPPYG00000010785) #27	ABHD12 (ENSPPYG00000010786) #28	GINS1 (ENSPPYG00000010787) #30	NINL (ENSPPYG00000010788) #31	NANP (ENSPPYG00000040950) #32	ZNF337 (ENSPPYG00000010790) #33	ENSPPYG00000010791	PROKR2 (ENSPPYG00000010792) #36	ENSPPYG00000010793 ##37	CDS2 (ENSPPYG00000010794)	PCNA (ENSPPYG00000010795)
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Rhinopithecus	ANCESTRAL SPECIES	412															ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Golden snub-nosed monkey	MODERN SPECIES	595															SYNDIG1 (ENSRROG00000034113) #21	CST7 (ENSRROG00000035881) #22	APMAP (ENSRROG00000037641) #23	ACSS1 (ENSRROG00000043161) #24	VSX1 (ENSRROG00000044921) #25	ENSRROG00000044632	ENTPD6 (ENSRROG00000031262) #26	PYGB (ENSRROG00000035671) #27	ABHD12 (ENSRROG00000045624) #28	GINS1 (ENSRROG00000036067) #30	NINL (ENSRROG00000036818) #31	NANP (ENSRROG00000042030) #32	ZNF337 (ENSRROG00000037719) #33
Black snub-nosed monkey	MODERN SPECIES	2329															SYNDIG1 (ENSRBIG00000040849) #21	CST7 (ENSRBIG00000037963) #22	APMAP (ENSRBIG00000028571) #23	ACSS1 (ENSRBIG00000035582) #24	VSX1 (ENSRBIG00000032231) #25	ENSRBIG00000037585	ENTPD6 (ENSRBIG00000037558) #26	PYGB (ENSRBIG00000043048) #27	ABHD12 (ENSRBIG00000033301) #28	ENSRBIG00000037880	LRP2BP (ENSRBIG00000036810)	ANKRD37 (ENSRBIG00000030265)	UFSP2 (ENSRBIG00000031222)	C4orf47 (ENSRBIG00000027024)	CCDC110 (ENSRBIG00000032062)	PDLIM3 (ENSRBIG00000027283)	SORBS2 (ENSRBIG00000038356)
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877	ENSGT00940000164098.a.b #17	ENSGT00940000164098.a.a #17	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000164098.a.a #17	ENSGT00940000163410 #19	ENSGT00940000154755.d #18	ENSGT00860000135650.a	ENSGT00940000164098.a.b #17	ENSGT00940000161877.h	ENSGT00940000166721	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Macaca	ANCESTRAL SPECIES	16	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721	ENSGT00940000161877.g.b	ENSGT00940000164098.a.a #17	ENSGT00940000163410 #19	ENSGT00860000135650.a	ENSGT00940000154755.d #18	ENSGT00860000135650.b	ENSGT00940000164098.a.b #17	ENSGT00940000161877.g.a	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Pig-tailed macaque	MODERN SPECIES	130	NXT1 (ENSMNEG00000027745)	GZF1 (ENSMNEG00000033117) #11	NAPB (ENSMNEG00000036841) #12	CSTL1 (ENSMNEG00000044944) #13	CST11 (ENSMNEG00000041474) #14	ENSMNEG00000032864 #15	CST8 (ENSMNEG00000037697) #16	CST9 (ENSMNEG00000039807) #17	ENSMNEG00000039062 #19	ENSMNEG00000039431	CST3 (ENSMNEG00000032382) #18	ENSMNEG00000044989	CST9L (ENSMNEG00000032753)	CST5 (ENSMNEG00000039359) #20	SYNDIG1 (ENSMNEG00000029710) #21	CST7 (ENSMNEG00000030455) #22	APMAP (ENSMNEG00000043679) #23	ACSS1 (ENSMNEG00000042557) #24	VSX1 (ENSMNEG00000013966) #25	ENSMNEG00000036046	ENTPD6 (ENSMNEG00000027824) #26	PYGB (ENSMNEG00000035548) #27	ABHD12 (ENSMNEG00000038825) #28	GINS1 (ENSMNEG00000035311) #30	NINL (ENSMNEG00000034434) #31	NANP (ENSMNEG00000038191) #32
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000166721.a	ENSGT00940000164098.a.a #17	ENSGT00940000163410.d #19	ENSGT00860000135650.a	ENSGT00940000154755.d #18	ENSGT00940000163410.c #19	ENSGT00940000164098.a.b #17	ENSGT00940000161877.g.a	ENSGT00940000161877.g.b	ENSGT00940000166721.b	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01070000254267.b	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820.a #33
Rhesus	MODERN SPECIES	1	CSTL1 (ENSMMUG00000055975) #13	CST11 (ENSMMUG00000022393) #14	ENSMMUG00000016490 #15	CST8 (ENSMMUG00000016489) #16	ENSMMUG00000059402	ENSMMUG00000063687	CST9 (ENSMMUG00000039259) #17	ENSMMUG00000046980 #19	CST3 (ENSMMUG00000050596) #18	ENSMMUG00000050726	ENSMMUG00000063629 #19	CST9L (ENSMMUG00000045312)	ENSMMUG00000003933	CST5 (ENSMMUG00000059092) #20	SYNDIG1 (ENSMMUG00000015852) #21	CST7 (ENSMMUG00000005757) #22	APMAP (ENSMMUG00000061222) #23	ACSS1 (ENSMMUG00000020597) #24	VSX1 (ENSMMUG00000058095) #25	ENSMMUG00000052572	PYGB (ENSMMUG00000009199) #27	ABHD12 (ENSMMUG00000009201) #28	ENSMMUG00000059374	GINS1 (ENSMMUG00000002397) #30	NINL (ENSMMUG00000009953) #31	ENSMMUG00000065032	NANP (ENSMMUG00000020858) #32	ZNF337 (ENSMMUG00000020859) #33	ENSMMUG00000001813	ENSMMUG00000049809	ENSMMUG00000050280
Crab-eating macaque	MODERN SPECIES	1	NAPB (ENSMFAG00000012865) #12	CSTL1 (ENSMFAG00000057818) #13	CST11 (ENSMFAG00000038093) #14	ENSMFAG00000032810 #15	CST8 (ENSMFAG00000033001) #16	ENSMFAG00000061186	ENSMFAG00000055858	ENSMFAG00000051852 #17	ENSMFAG00000001311 #19	CST3 (ENSMFAG00000062094) #18	ENSMFAG00000032358 #19	ENSMFAG00000002225 #17	CST9L (ENSMFAG00000045303)	CST5 (ENSMFAG00000042493) #20	SYNDIG1 (ENSMFAG00000052498) #21	CST7 (ENSMFAG00000003193) #22	APMAP (ENSMFAG00000033103) #23	ACSS1 (ENSMFAG00000003063) #24	VSX1 (ENSMFAG00000043885) #25	ENSMFAG00000048668	ENTPD6 (ENSMFAG00000000133) #26	PYGB (ENSMFAG00000033575) #27	ABHD12 (ENSMFAG00000002681) #28	GINS1 (ENSMFAG00000002736) #30	ENSMFAG00000062076	NINL (ENSMFAG00000036364) #31	NANP (ENSMFAG00000036787) #32	ENSMFAG00000031149 #33	ENSMFAG00000047352	ENSMFAG00000001981	ENSMFAG00000058952
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000164098.a.a #17	ENSGT00940000163410 #19	ENSGT00860000135650.a	ENSGT00940000154755.d #18	ENSGT00940000164098.a.b #17	ENSGT00940000161877.h	ENSGT00940000166721	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT01050000248429	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Olive baboon	MODERN SPECIES	7	HDHD5 (ENSPANG00000024306)	TMEM121B (ENSPANG00000015715)	ENSPANG00000016404	ENSPANG00000044107	ENSPANG00000050870	ENSPANG00000049477	ENSPANG00000046906	ENSPANG00000050867	ENSPANG00000030853 #17	ENSPANG00000021092 #19	ENSPANG00000000660 #17	ENSPANG00000023845	SYNDIG1 (ENSPANG00000047245) #21	ENSPANG00000048046	APMAP (ENSPANG00000051418) #23	CST7 (ENSPANG00000042634) #22	ACSS1 (ENSPANG00000017910) #24	VSX1 (ENSPANG00000021775) #25	ENTPD6 (ENSPANG00000026175) #26	ENSPANG00000045994	PYGB (ENSPANG00000024585) #27	ABHD12 (ENSPANG00000001312) #28	GINS1 (ENSPANG00000032488) #30	NINL (ENSPANG00000016039) #31	ENSPANG00000044377	NANP (ENSPANG00000031862) #32	ENSPANG00000048820	CD93 (ENSPANG00000018432) #9	THBD (ENSPANG00000046781) #8	SSTR4 (ENSPANG00000004090) #7	ENSPANG00000044373
Cercopithecinae_d	ANCESTRAL SPECIES	2	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000164098.a.a #17	ENSGT00940000154755.d #18	ENSGT00860000135650.a	ENSGT00940000163410 #19	ENSGT00940000164098.a.b #17	ENSGT00940000161877.h	ENSGT00940000166721	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00940000157300.d	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31
Drill	MODERN SPECIES	1583											ENSMLEG00000035691	ENSMLEG00000037193 #17	CST9L (ENSMLEG00000038338)	CST5 (ENSMLEG00000029640) #20	SYNDIG1 (ENSMLEG00000030663) #21	CST7 (ENSMLEG00000035783) #22	APMAP (ENSMLEG00000041061) #23	ACSS1 (ENSMLEG00000029721) #24	VSX1 (ENSMLEG00000002119) #25
Sooty mangabey	MODERN SPECIES	602	NAPB (ENSCATG00000042262) #12	CSTL1 (ENSCATG00000031751) #13	CST11 (ENSCATG00000042927) #14	ENSCATG00000043404 #15	CST8 (ENSCATG00000033479) #16	ENSCATG00000033110 #17	ENSCATG00000043016 #19	CST3 (ENSCATG00000032215) #18	ENSCATG00000036042	ENSCATG00000035785 #19	ENSCATG00000035179 #17	CST9L (ENSCATG00000032932)	ENSCATG00000032535	CST5 (ENSCATG00000032239) #20	SYNDIG1 (ENSCATG00000034882) #21	CST7 (ENSCATG00000043766) #22	APMAP (ENSCATG00000016408) #23	ACSS1 (ENSCATG00000038637) #24	VSX1 (ENSCATG00000037882) #25	ENSCATG00000007149	ENTPD6 (ENSCATG00000031217) #26	PYGB (ENSCATG00000039037) #27	ABHD12 (ENSCATG00000033998) #28	GINS1 (ENSCATG00000035618) #30	NINL (ENSCATG00000024895) #31
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Cebidae	ANCESTRAL SPECIES	13	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00390000016478.i.b	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Marmoset	MODERN SPECIES	17	CD93 (ENSCJAG00000005796) #9	NXT1 (ENSCJAG00000044836)	GZF1 (ENSCJAG00000000733) #11	NAPB (ENSCJAG00000000712) #12	CSTL1 (ENSCJAG00000041540) #13	CST11 (ENSCJAG00000080392) #14	ENSCJAG00000074097 #15	CST8 (ENSCJAG00000000697) #16	ENSCJAG00000078884	CST9 (ENSCJAG00000084681) #17	CST3 (ENSCJAG00000036809) #18	ENSCJAG00000000676 #19	CST5 (ENSCJAG00000037422) #20	SYNDIG1 (ENSCJAG00000046278) #21	APMAP (ENSCJAG00000085161) #23	CST7 (ENSCJAG00000048473) #22	ACSS1 (ENSCJAG00000011837) #24	VSX1 (ENSCJAG00000069727) #25	ENSCJAG00000011698 #27	ABHD12 (ENSCJAG00000011654) #28	GINS1 (ENSCJAG00000011640) #30	NINL (ENSCJAG00000011624) #31	NANP (ENSCJAG00000048461) #32	ZNF337 (ENSCJAG00000011611) #33	RPN2 (ENSCJAG00000021517)	GHRH (ENSCJAG00000021515)	ENSCJAG00000076632	SRC (ENSCJAG00000021512)	BLCAP (ENSCJAG00000048212)	ENSCJAG00000041804	ENSCJAG00000048098
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.d #18	ENSGT00940000163410 #19	ENSGT00940000164560 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00390000016478.i.b	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164820 #33
Bolivian squirrel monkey	MODERN SPECIES	211	SSTR4 (ENSSBOG00000013012) #7	CD93 (ENSSBOG00000018965) #9	NXT1 (ENSSBOG00000036378)	GZF1 (ENSSBOG00000018893) #11	NAPB (ENSSBOG00000019980) #12	CSTL1 (ENSSBOG00000006474) #13	CST11 (ENSSBOG00000025613) #14	ENSSBOG00000025115 #15	CST8 (ENSSBOG00000021877) #16	CST9L (ENSSBOG00000020799)	CST9 (ENSSBOG00000020759) #17	CST3 (ENSSBOG00000030007) #18	ENSSBOG00000028716 #19	CST5 (ENSSBOG00000022942) #20	SYNDIG1 (ENSSBOG00000023812) #21	CST7 (ENSSBOG00000021587) #22	APMAP (ENSSBOG00000035251) #23	ACSS1 (ENSSBOG00000031199) #24	ENSSBOG00000025683 #25	ENTPD6 (ENSSBOG00000026749) #26	PYGB (ENSSBOG00000021161) #27	ABHD12 (ENSSBOG00000022490) #28	GINS1 (ENSSBOG00000022068) #30	ENSSBOG00000028297	NINL (ENSSBOG00000025198) #31	NANP (ENSSBOG00000028505) #32	ZNF337 (ENSSBOG00000034901) #33	ENSSBOG00000020085
Capuchin	MODERN SPECIES	134	THBD (ENSCCAG00000020711) #8	CD93 (ENSCCAG00000034013) #9	NXT1 (ENSCCAG00000015478)	GZF1 (ENSCCAG00000035601) #11	NAPB (ENSCCAG00000029344) #12	CSTL1 (ENSCCAG00000033212) #13	CST11 (ENSCCAG00000035766) #14	ENSCCAG00000037786 #15	CST8 (ENSCCAG00000024862) #16	CST9L (ENSCCAG00000026509)	CST9 (ENSCCAG00000024829) #17	CST3 (ENSCCAG00000001843) #18	ENSCCAG00000033223 #19	CST5 (ENSCCAG00000034182) #20	SYNDIG1 (ENSCCAG00000028638) #21	CST7 (ENSCCAG00000027578) #22	APMAP (ENSCCAG00000023838) #23	ACSS1 (ENSCCAG00000037466) #24	ENSCCAG00000033591	VSX1 (ENSCCAG00000015659) #25	ENTPD6 (ENSCCAG00000008076) #26	PYGB (ENSCCAG00000024374) #27	ABHD12 (ENSCCAG00000019845) #28	GINS1 (ENSCCAG00000034779) #30	NINL (ENSCCAG00000033765) #31
Mas night monkey	MODERN SPECIES	1049													CST5 (ENSANAG00000019554) #20	ENSANAG00000031339	SYNDIG1 (ENSANAG00000029055) #21	CST7 (ENSANAG00000028258) #22	APMAP (ENSANAG00000022389) #23	ACSS1 (ENSANAG00000035424) #24	ENSANAG00000026111	VSX1 (ENSANAG00000029622) #25	ENTPD6 (ENSANAG00000022470) #26	PYGB (ENSANAG00000031809) #27	ABHD12 (ENSANAG00000034290) #28	GINS1 (ENSANAG00000019506) #30	NINL (ENSANAG00000029624) #31	ENSANAG00000031273	NANP (ENSANAG00000027665) #32	ZNF337 (ENSANAG00000021202) #33
Tarsier	MODERN SPECIES	6271																CST7 (ENSTSYG00000032741) #22	APMAP (ENSTSYG00000032650) #23	ACSS1 (ENSTSYG00000005675) #24	VSX1 (ENSTSYG00000011433) #25	ENTPD6 (ENSTSYG00000009781) #26	PYGB (ENSTSYG00000033095) #27	ABHD12 (ENSTSYG00000010157) #28	GINS1 (ENSTSYG00000002220) #30	NINL (ENSTSYG00000012921) #31
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00940000164098 #17	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Lemuriformes	ANCESTRAL SPECIES	44	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162294 #16	ENSGT00940000164098 #17	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645	ENSGT00940000156391	ENSGT00940000162580	ENSGT00940000161707.b
Lemuriformes_a	ANCESTRAL SPECIES	115														ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645	ENSGT00940000156391	ENSGT00940000162580	ENSGT00940000161707.b
Coquerels sifaka	MODERN SPECIES	611													ENSPCOG00000021349 #19	SYNDIG1 (ENSPCOG00000003880) #21	ENSPCOG00000023905	CST7 (ENSPCOG00000019725) #22	APMAP (ENSPCOG00000023592) #23	ACSS1 (ENSPCOG00000018745) #24	VSX1 (ENSPCOG00000013919) #25	ENTPD6 (ENSPCOG00000022862) #26	PYGB (ENSPCOG00000021348) #27	ABHD12 (ENSPCOG00000022073) #28	GINS1 (ENSPCOG00000016034) #30	NINL (ENSPCOG00000019338) #31	ENSPCOG00000014381	NANP (ENSPCOG00000022703) #32	HTRA3 (ENSPCOG00000015549)	ACOX3 (ENSPCOG00000015967)	TRMT44 (ENSPCOG00000028809)	CPZ (ENSPCOG00000018885)	HMX1 (ENSPCOG00000019742)
Greater bamboo lemur	MODERN SPECIES	602															SYNDIG1 (ENSPSMG00000010370) #21	CST7 (ENSPSMG00000010357) #22	APMAP (ENSPSMG00000010339) #23	ACSS1 (ENSPSMG00000010324) #24	ENSPSMG00000010300	VSX1 (ENSPSMG00000010286) #25	ENTPD6 (ENSPSMG00000010235) #26	PYGB (ENSPSMG00000009949) #27	ABHD12 (ENSPSMG00000009630) #28	GINS1 (ENSPSMG00000009556) #30	NINL (ENSPSMG00000009545) #31	NANP (ENSPSMG00000009528) #32
Mouse lemur	MODERN SPECIES	9	NKX2-2 (ENSMICG00000045009)	PAX1 (ENSMICG00000016968)	FOXA2 (ENSMICG00000030588)	CD93 (ENSMICG00000017898) #9	NXT1 (ENSMICG00000044853)	GZF1 (ENSMICG00000046070) #11	NAPB (ENSMICG00000017902) #12	CSTL1 (ENSMICG00000017903) #13	CST11 (ENSMICG00000017904) #14	CST8 (ENSMICG00000017905) #16	CST9 (ENSMICG00000047052) #17	ENSMICG00000004617 ##18	ENSMICG00000043235 ##18	ENSMICG00000032368	SYNDIG1 (ENSMICG00000027578) #21	CST7 (ENSMICG00000002037) #22	APMAP (ENSMICG00000002038) #23	ACSS1 (ENSMICG00000002040) #24	VSX1 (ENSMICG00000002047) #25	ENTPD6 (ENSMICG00000005764) #26	PYGB (ENSMICG00000005768) #27	ABHD12 (ENSMICG00000005779) #28	GINS1 (ENSMICG00000037715) #30	NINL (ENSMICG00000005792) #31	NANP (ENSMICG00000027386) #32	HTRA3 (ENSMICG00000030499)	ACOX3 (ENSMICG00000011777)	ENSMICG00000032294	CPZ (ENSMICG00000012180)	HMX1 (ENSMICG00000045196)	ADRA2C (ENSMICG00000036964)
Bushbaby	MODERN SPECIES	312															SYNDIG1 (ENSOGAG00000008495) #21	CST7 (ENSOGAG00000008497) #22	APMAP (ENSOGAG00000002478) #23	ACSS1 (ENSOGAG00000008498) #24	VSX1 (ENSOGAG00000008500) #25	ENTPD6 (ENSOGAG00000025094) #26	PYGB (ENSOGAG00000032919) #27	ABHD12 (ENSOGAG00000008501) #28	GINS1 (ENSOGAG00000006512) #30	NINL (ENSOGAG00000006517) #31	ENSOGAG00000006535 #32	ENSOGAG00000032695	ENSOGAG00000000694	ENSOGAG00000028618	ADAM2 (ENSOGAG00000002056)	IDO1 (ENSOGAG00000012936)	IDO2 (ENSOGAG00000012941)
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Glires	ANCESTRAL SPECIES	17	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000164098 #17	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000164098 #17	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000161877.c.b	ENSGT00940000164098 #17	ENSGT00940000161877.d	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164901	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517	ENSGT00530000063880.a
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.d	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00960000186656.a.b	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000043445	FOXA2 (ENSHGLG00000048805)	PAX1 (ENSHGLG00000015866)	NKX2-2 (ENSHGLG00000048629)	NKX2-4 (ENSHGLG00000008824)	XRN2 (ENSHGLG00000014831)	KIZ (ENSHGLG00000014057)	ENSHGLG00000037468	ENSHGLG00000016477	ENSHGLG00000047697	ENSHGLG00000013572	ENSHGLG00000035992 ##18	ENSHGLG00000001178 ##18	ENSHGLG00000049828	ENSHGLG00000001156 #21	CST7 (ENSHGLG00000001075) #22	APMAP (ENSHGLG00000045360) #23	ENSHGLG00000042834 #24	ENSHGLG00000034236 #24	ENSHGLG00000039362	ENTPD6 (ENSHGLG00000000193) #26	PYGB (ENSHGLG00000000176) #27	ABHD12 (ENSHGLG00000035916) #28	ENSHGLG00000035611 #30	ENSHGLG00000040387	ENSHGLG00000000136	RASGRF1 (ENSHGLG00000000128)	ENSHGLG00000000119	ENSHGLG00000000106	ENSHGLG00000041324	ENSHGLG00000000301
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.d	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.d ##18	ENSGT00940000154755.c.b.c ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00530000063880.a
Guinea pig	MODERN SPECIES	8	THBD (ENSCPOG00000030575) #8	CD93 (ENSCPOG00000010252) #9	NXT1 (ENSCPOG00000008817)	GZF1 (ENSCPOG00000010790) #11	NAPB (ENSCPOG00000039063) #12	CSTL1 (ENSCPOG00000008734) #13	ENSCPOG00000003822 #14	ENSCPOG00000025993 #15	CST8 (ENSCPOG00000005550) #16	ENSCPOG00000021926	ENSCPOG00000025294	ENSCPOG00000030716 ##18	ENSCPOG00000030984 ##18	ENSCPOG00000026799 ##18	SYNDIG1 (ENSCPOG00000004943) #21	CST7 (ENSCPOG00000008022) #22	APMAP (ENSCPOG00000008131) #23	ACSS1 (ENSCPOG00000021704) #24	VSX1 (ENSCPOG00000003951) #25	ENTPD6 (ENSCPOG00000009587) #26	PYGB (ENSCPOG00000021215) #27	ABHD12 (ENSCPOG00000004078) #28	GINS1 (ENSCPOG00000000260) #30	NINL (ENSCPOG00000005041) #31	NANP (ENSCPOG00000031912) #32	ENSCPOG00000006435	ENSCPOG00000030176	ENSCPOG00000032111	NSFL1C (ENSCPOG00000004012)	ENSCPOG00000032891	SDCBP2 (ENSCPOG00000021957)
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.d ##18	ENSGT00940000154755.c.b.c ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT01030000234638.b.a.a	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000008063	ENSGT01100000263497.E.a.a	ENSGT00390000006806
Degu	MODERN SPECIES	114	PAX1 (ENSODEG00000012427)	FOXA2 (ENSODEG00000011162)	THBD (ENSODEG00000010709) #8	CD93 (ENSODEG00000012518) #9	NXT1 (ENSODEG00000019900)	GZF1 (ENSODEG00000013020) #11	NAPB (ENSODEG00000011065) #12	CSTL1 (ENSODEG00000010719) #13	CST11 (ENSODEG00000013274) #14	ENSODEG00000012595 #15	ENSODEG00000010448 #16	ENSODEG00000010611	CST3 (ENSODEG00000012334) ##18	ENSODEG00000019797	SYNDIG1 (ENSODEG00000012369) #21	CST7 (ENSODEG00000011264) #22	APMAP (ENSODEG00000010678) #23	ACSS1 (ENSODEG00000010733) #24	VSX1 (ENSODEG00000010102) #25	ENTPD6 (ENSODEG00000010721) #26	PYGB (ENSODEG00000011290) #27	ABHD12 (ENSODEG00000013149) #28	GINS1 (ENSODEG00000011331) #30	ENSODEG00000014252 #31	ENSODEG00000012295 #32	ENSODEG00000012183	MAN2B1 (ENSODEG00000010434)	WDR83OS (ENSODEG00000011674)	WDR83 (ENSODEG00000010258)	DHPS (ENSODEG00000010756)	ENSODEG00000011490
Long-tailed chinchilla	MODERN SPECIES	122	PAX1 (ENSCLAG00000016362)	FOXA2 (ENSCLAG00000014548)	THBD (ENSCLAG00000011994) #8	CD93 (ENSCLAG00000012062) #9	NXT1 (ENSCLAG00000012493)	GZF1 (ENSCLAG00000014714) #11	NAPB (ENSCLAG00000011540) #12	CSTL1 (ENSCLAG00000012446) #13	ENSCLAG00000011384 #14	ENSCLAG00000015474 #15	ENSCLAG00000015212 #16	ENSCLAG00000017066	ENSCLAG00000015899 ##18	ENSCLAG00000012454 ##18	SYNDIG1 (ENSCLAG00000012586) #21	CST7 (ENSCLAG00000015428) #22	APMAP (ENSCLAG00000013445) #23	ACSS1 (ENSCLAG00000012190) #24	VSX1 (ENSCLAG00000015160) #25	ENSCLAG00000015639 #26	PYGB (ENSCLAG00000012954) #27	ABHD12 (ENSCLAG00000010950) #28	GINS1 (ENSCLAG00000010830) #30	NINL (ENSCLAG00000011605) #31	NANP (ENSCLAG00000014668) #32	ZNF333 (ENSCLAG00000014959)	MAN2B1 (ENSCLAG00000013086)	ENSCLAG00000011821	WDR83 (ENSCLAG00000012198)	DHPS (ENSCLAG00000012256)	FBXW9 (ENSCLAG00000012587)
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000161877.d	ENSGT00940000161877.c.b	ENSGT00940000164098 #17	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.e ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Marmotini	ANCESTRAL SPECIES	5	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000161877.d	ENSGT00940000161877.c.b	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.e ##18	ENSGT00940000154755.c.b.f ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000154617.B
Marmotini_b	ANCESTRAL SPECIES	140	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000161877.d	ENSGT00940000161877.c.b	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.e ##18	ENSGT00940000154755.c.b.f ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000154617.B
Squirrel	MODERN SPECIES	220	NAPB (ENSSTOG00000022350) #12	CSTL1 (ENSSTOG00000024563) #13	CST11 (ENSSTOG00000004847) #14	ENSSTOG00000021841 ##15	ENSSTOG00000024532 #15	CST8 (ENSSTOG00000004122) #16	ENSSTOG00000020102	ENSSTOG00000004129	ENSSTOG00000028869	ENSSTOG00000015564	ENSSTOG00000026963 ##18	ENSSTOG00000023496	ENSSTOG00000001311 ##18	ENSSTOG00000001243 ##18	SYNDIG1 (ENSSTOG00000021952) #21	CST7 (ENSSTOG00000005896) #22	APMAP (ENSSTOG00000005903) #23	ACSS1 (ENSSTOG00000005944) #24	VSX1 (ENSSTOG00000026010) #25	ENTPD6 (ENSSTOG00000006956) #26	PYGB (ENSSTOG00000014388) #27	ABHD12 (ENSSTOG00000014396) #28	GINS1 (ENSSTOG00000014406) #30	NINL (ENSSTOG00000014411) #31	NANP (ENSSTOG00000002050) #32
Arctic ground squirrel	MODERN SPECIES	114	ENSUPAG00010009850	ENSUPAG00010009855	CSTL1 (ENSUPAG00010009856) #13	CST11 (ENSUPAG00010009858) #14	ENSUPAG00010009872 ##15	ENSUPAG00010009878 #15	CST8 (ENSUPAG00010009884) #16	ENSUPAG00010009895	ENSUPAG00010009902	ENSUPAG00010009918	ENSUPAG00010009934 ##18	ENSUPAG00010009938 ##18	ENSUPAG00010009978 ##18	SYNDIG1 (ENSUPAG00010009998) #21	ENSUPAG00010010012	CST7 (ENSUPAG00010010018) #22	APMAP (ENSUPAG00010010025) #23	ACSS1 (ENSUPAG00010010043) #24	ENSUPAG00010010076	VSX1 (ENSUPAG00010010081) #25	ENTPD6 (ENSUPAG00010010093) #26	PYGB (ENSUPAG00010010109) #27	ABHD12 (ENSUPAG00010010127) #28	GINS1 (ENSUPAG00010010140) #30	NINL (ENSUPAG00010010146) #31	NANP (ENSUPAG00010010172) #32	CHRNA7 (ENSUPAG00010010177)
Alpin marmot	MODERN SPECIES	33																CST7 (ENSMMMG00000021618) #22	APMAP (ENSMMMG00000021607) #23	ACSS1 (ENSMMMG00000021594) #24	VSX1 (ENSMMMG00000021586) #25	ENTPD6 (ENSMMMG00000021571) #26	PYGB (ENSMMMG00000021556) #27	ABHD12 (ENSMMMG00000021545) #28	GINS1 (ENSMMMG00000021538) #30	NINL (ENSMMMG00000021519) #31	ENSMMMG00000021516	NANP (ENSMMMG00000021513) #32	CHRNA7 (ENSMMMG00000021504)	ENSMMMG00000021501	OTUD7A (ENSMMMG00000021494)	ENSMMMG00000021489	ENSMMMG00000021473
Eurasian red squirrel	MODERN SPECIES	11	NAPB (ENSSVLG00005000227) #12	CSTL1 (ENSSVLG00005000168) #13	CST11 (ENSSVLG00005000162) #14	ENSSVLG00005000139 ##15	ENSSVLG00005000133 #15	CST8 (ENSSVLG00005000126) #16	ENSSVLG00005012871	ENSSVLG00005012823	ENSSVLG00005012749	ENSSVLG00005012678 #17	ENSSVLG00005012635 ##18	ENSSVLG00005012618	ENSSVLG00005012569 ##18	ENSSVLG00005012499 ##18	SYNDIG1 (ENSSVLG00005012463) #21	CST7 (ENSSVLG00005012392) #22	APMAP (ENSSVLG00005012325) #23	ACSS1 (ENSSVLG00005012262) #24	ENSSVLG00005012189	VSX1 (ENSSVLG00005012048) #25	PYGB (ENSSVLG00005011885) #27	ABHD12 (ENSSVLG00005011759) #28	GINS1 (ENSSVLG00005011707) #30	NINL (ENSSVLG00005011654) #31	NANP (ENSSVLG00005011598) #32	ARL2BP (ENSSVLG00005011550)	ENSSVLG00005011535	CTXND1 (ENSSVLG00005011512)	ARNT2 (ENSSVLG00005011111)	ENSSVLG00005011041	ABHD17C (ENSSVLG00005010975)
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.b.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.b.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Chinese hamster chok1gshd	MODERN SPECIES	188	Napb (ENSCGRG00001015884) #12	Cstl1 (ENSCGRG00001006313) #13	Cst11 (ENSCGRG00001004859) #14	Cstdc1 (ENSCGRG00001024407) ##15	Cst12 (ENSCGRG00001024036) #15	Cst8 (ENSCGRG00001020750) #16	Cst13 (ENSCGRG00001024079)	ENSCGRG00001017812	ENSCGRG00001014456	ENSCGRG00001020338	ENSCGRG00001017333 ##18	Cst10 (ENSCGRG00001015577) ##18	ENSCGRG00001019793	Syndig1 (ENSCGRG00001019306) #21	ENSCGRG00001015934	Cst7 (ENSCGRG00001014715) #22	Apmap (ENSCGRG00001000472) #23	Acss1 (ENSCGRG00001016253) #24	Vsx1 (ENSCGRG00001021064) #25	Entpd6 (ENSCGRG00001018431) #26	Pygb (ENSCGRG00001023540) #27	Abhd12 (ENSCGRG00001013771) #28	Gins1 (ENSCGRG00001011595) #30	ENSCGRG00001000897	Ninl (ENSCGRG00001000443) #31	Nanp (ENSCGRG00001002985) #32	ENSCGRG00001011715	Nsfl1c (ENSCGRG00001016159)	Fkbp1a (ENSCGRG00001006692)	Sdcbp2 (ENSCGRG00001000837)	Snph (ENSCGRG00001023538)
Golden Hamster	MODERN SPECIES	650	Foxa2 (ENSMAUG00000016457)	Sstr4 (ENSMAUG00000008430) #7	Cd93 (ENSMAUG00000019441) #9	Nxt1 (ENSMAUG00000004141)	Gzf1 (ENSMAUG00000019656) #11	Napb (ENSMAUG00000018004) #12	Cst12 (ENSMAUG00000010970) #15	Cst13 (ENSMAUG00000021851)	Cst9 (ENSMAUG00000012174)	Cstdc2 (ENSMAUG00000014409)	Cst3 (ENSMAUG00000012476) ##18	Cst10 (ENSMAUG00000020427) ##18	ENSMAUG00000013001	Syndig1 (ENSMAUG00000012485) #21	1810024B03Rik (ENSMAUG00000019265)	Cst7 (ENSMAUG00000006797) #22	Apmap (ENSMAUG00000022255) #23	Acss1 (ENSMAUG00000016079) #24	Vsx1 (ENSMAUG00000011376) #25	Entpd6 (ENSMAUG00000001297) #26	Pygb (ENSMAUG00000017595) #27	Abhd12 (ENSMAUG00000008947) #28	Gins1 (ENSMAUG00000007925) #30	Ninl (ENSMAUG00000021812) #31	Nanp (ENSMAUG00000005527) #32	ENSMAUG00000017073	Nsfl1c (ENSMAUG00000010106)	ENSMAUG00000010062	Sdcbp2 (ENSMAUG00000016605)	Snph (ENSMAUG00000017593)	ENSMAUG00000014672
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.b.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Prairie vole	MODERN SPECIES	183												Cst10 (ENSMOCG00000001615) ##18	ENSMOCG00000013859	Syndig1 (ENSMOCG00000000664) #21	1810024B03Rik (ENSMOCG00000000132)	Cst7 (ENSMOCG00000004809) #22	Apmap (ENSMOCG00000012045) #23	Acss1 (ENSMOCG00000017761) #24	Vsx1 (ENSMOCG00000004010) #25	Entpd6 (ENSMOCG00000010755) #26	Pygb (ENSMOCG00000000113) #27	Abhd12 (ENSMOCG00000003134) #28	Gins1 (ENSMOCG00000010221) #30	ENSMOCG00000009484 #31	ENSMOCG00000001430 #32
Northern American deer mouse	MODERN SPECIES	17	Nxt1 (ENSPEMG00000010397)	Gzf1 (ENSPEMG00000011285) #11	Napb (ENSPEMG00000014658) #12	Cstl1 (ENSPEMG00000015396) #13	Cst11 (ENSPEMG00000000143) #14	Cstdc1 (ENSPEMG00000018705) ##15	Cst12 (ENSPEMG00000000557) #15	Cst8 (ENSPEMG00000030932) #16	Cst13 (ENSPEMG00000005338)	Cst9 (ENSPEMG00000020106)	Cst3 (ENSPEMG00000019347) ##18	ENSPEMG00000028985 ##18	ENSPEMG00000025257	Cst10 (ENSPEMG00000018501) ##18	Syndig1 (ENSPEMG00000002878) #21	Cst7 (ENSPEMG00000001829) #22	Apmap (ENSPEMG00000013192) #23	Acss1 (ENSPEMG00000014809) #24	Vsx1 (ENSPEMG00000016349) #25	Entpd6 (ENSPEMG00000011143) #26	Pygb (ENSPEMG00000016365) #27	Abhd12 (ENSPEMG00000023436) #28	Gins1 (ENSPEMG00000013343) #30	Ninl (ENSPEMG00000011872) #31	Nanp (ENSPEMG00000029409) #32	Nsfl1c (ENSPEMG00000023871)	Fkbp1a (ENSPEMG00000028282)	Sdcbp2 (ENSPEMG00000017701)	Snph (ENSPEMG00000023065)	Rad21l (ENSPEMG00000023240)	Tmem74bos (ENSPEMG00000024790)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Mus	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Mus_A	ANCESTRAL SPECIES		ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000172008	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000153805.q.b.a.a.a.b.a	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Mouse	MODERN SPECIES	11	Cst13 (ENSMUSG00000036924)	Cst9 (ENSMUSG00000027445)	Cstdc2 (ENSMUSG00000027446)	Cst3 (ENSMUSG00000027447) ##18	Gm1330 (ENSMUSG00000063507)	Cst10 (ENSMUSG00000033156) ##18	Syndig1 (ENSMUSG00000074736) #21	Zfp120 (ENSMUSG00000068134)	Gm14139 (ENSMUSG00000079009)	Zfp937 (ENSMUSG00000060336)	Gm14124 (ENSMUSG00000079008)	3300002I08Rik (ENSMUSG00000063364)	Gm10130 (ENSMUSG00000095315)	Zfp442 (ENSMUSG00000068130)	Zfp345 (ENSMUSG00000074731)	Cst7 (ENSMUSG00000068129) #22	Apmap (ENSMUSG00000033096) #23	Acss1 (ENSMUSG00000027452) #24	Vsx1 (ENSMUSG00000033080) #25	Entpd6 (ENSMUSG00000033068) #26	Pygb (ENSMUSG00000033059) #27	Abhd12 (ENSMUSG00000032046) #28	Gins1 (ENSMUSG00000027454) #30	Ninl (ENSMUSG00000068115) #31	Nanp (ENSMUSG00000053916) #32	Gm14151 (ENSMUSG00000079006)	Gm14147 (ENSMUSG00000079005)	4921509C19Rik (ENSMUSG00000061525)	Nsfl1c (ENSMUSG00000027455)	Fkbp1a (ENSMUSG00000032966)	Sdcbp2 (ENSMUSG00000027456)
Mus_C	ANCESTRAL SPECIES		ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a ##18	ENSGT00940000172008	ENSGT00940000154755.c.b.a ##18	ENSGT00860000135980	ENSGT00950000183147.B #21	ENSGT00940000153805.q.b.a.a.a.b.a	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
spretus	MODERN SPECIES	11	Napb (MGP_SPRETEiJ_G0025328) #12	Cstl1 (MGP_SPRETEiJ_G0025329) #13	Cst11 (MGP_SPRETEiJ_G0025330) #14	Cstdc1 (MGP_SPRETEiJ_G0025331) ##15	Cst12 (MGP_SPRETEiJ_G0025332) #15	Cst8 (MGP_SPRETEiJ_G0025333) #16	Cst13 (MGP_SPRETEiJ_G0025334)	Cst9 (MGP_SPRETEiJ_G0025335)	Cstdc2 (MGP_SPRETEiJ_G0025336)	Cst3 (MGP_SPRETEiJ_G0025337) ##18	MGP_SPRETEiJ_G0025338	Cst10 (MGP_SPRETEiJ_G0025339) ##18	Syndig1 (MGP_SPRETEiJ_G0025340) #21	MGP_SPRETEiJ_G0025341	Zfp120 (MGP_SPRETEiJ_G0025342)	Cst7 (MGP_SPRETEiJ_G0025343) #22	Apmap (MGP_SPRETEiJ_G0025344) #23	Acss1 (MGP_SPRETEiJ_G0025345) #24	Vsx1 (MGP_SPRETEiJ_G0025346) #25	Entpd6 (MGP_SPRETEiJ_G0025347) #26	Pygb (MGP_SPRETEiJ_G0025348) #27	Abhd12 (MGP_SPRETEiJ_G0025349) #28	Gins1 (MGP_SPRETEiJ_G0025350) #30	Ninl (MGP_SPRETEiJ_G0025351) #31	MGP_SPRETEiJ_G0025352 #32	MGP_SPRETEiJ_G0025353 #32	Nsfl1c (MGP_SPRETEiJ_G0025355)	MGP_SPRETEiJ_G0025356	Sdcbp2 (MGP_SPRETEiJ_G0025357)	Snph (MGP_SPRETEiJ_G0025358)	Rad21l (MGP_SPRETEiJ_G0025359)
Steppe mouse	MODERN SPECIES	123																ENSMSIG00000000728 #22	Apmap (ENSMSIG00000000755) #23	Acss1 (ENSMSIG00000000805) #24	Vsx1 (ENSMSIG00000000862) #25	Entpd6 (ENSMSIG00000000878) #26	Pygb (ENSMSIG00000000916) #27	Abhd12 (ENSMSIG00000001029) #28	Gins1 (ENSMSIG00000001076) #30	Ninl (ENSMSIG00000001119) #31	Nanp (ENSMSIG00000001191) #32
Ryukyu mouse	MODERN SPECIES	11	Nxt1 (MGP_CAROLIEiJ_G0024408)	Gzf1 (MGP_CAROLIEiJ_G0024409) #11	Napb (MGP_CAROLIEiJ_G0024410) #12	Cstl1 (MGP_CAROLIEiJ_G0024411) #13	Cst11 (MGP_CAROLIEiJ_G0024412) #14	Cstdc1 (MGP_CAROLIEiJ_G0024413) ##15	Cst12 (MGP_CAROLIEiJ_G0024414) #15	Cst8 (MGP_CAROLIEiJ_G0024415) #16	Cst13 (MGP_CAROLIEiJ_G0024416)	Cst9 (MGP_CAROLIEiJ_G0024417)	Cstdc2 (MGP_CAROLIEiJ_G0024418)	Cst3 (MGP_CAROLIEiJ_G0024419) ##18	Cst10 (MGP_CAROLIEiJ_G0024420) ##18	Syndig1 (MGP_CAROLIEiJ_G0024421) #21	MGP_CAROLIEiJ_G0024422	Cst7 (MGP_CAROLIEiJ_G0024423) #22	Apmap (MGP_CAROLIEiJ_G0024424) #23	Acss1 (MGP_CAROLIEiJ_G0024425) #24	Vsx1 (MGP_CAROLIEiJ_G0024426) #25	Entpd6 (MGP_CAROLIEiJ_G0024427) #26	Pygb (MGP_CAROLIEiJ_G0024428) #27	Abhd12 (MGP_CAROLIEiJ_G0024429) #28	MGP_CAROLIEiJ_G0024430 #30	Ninl (MGP_CAROLIEiJ_G0024431) #31	MGP_CAROLIEiJ_G0024432 #32	MGP_CAROLIEiJ_G0024433 #32	Nsfl1c (MGP_CAROLIEiJ_G0024434)	MGP_CAROLIEiJ_G0024435	Sdcbp2 (MGP_CAROLIEiJ_G0024436)	Snph (MGP_CAROLIEiJ_G0024437)	Rad21l (MGP_CAROLIEiJ_G0024438)
Shrew mouse	MODERN SPECIES	16	Nxt1 (MGP_PahariEiJ_G0025851)	Gzf1 (MGP_PahariEiJ_G0025852) #11	Napb (MGP_PahariEiJ_G0025853) #12	Cstl1 (MGP_PahariEiJ_G0025854) #13	Cst11 (MGP_PahariEiJ_G0025855) #14	Cstdc1 (MGP_PahariEiJ_G0025856) ##15	Cst12 (MGP_PahariEiJ_G0025857) #15	Cst8 (MGP_PahariEiJ_G0025858) #16	Cst13 (MGP_PahariEiJ_G0025859)	Cstdc2 (MGP_PahariEiJ_G0025860)	Cst3 (MGP_PahariEiJ_G0025861) ##18	Cst10 (MGP_PahariEiJ_G0025862) ##18	Syndig1 (MGP_PahariEiJ_G0025863) #21	MGP_PahariEiJ_G0025864	MGP_PahariEiJ_G0025865	Cst7 (MGP_PahariEiJ_G0025866) #22	Apmap (MGP_PahariEiJ_G0025867) #23	Acss1 (MGP_PahariEiJ_G0025868) #24	Vsx1 (MGP_PahariEiJ_G0025869) #25	Entpd6 (MGP_PahariEiJ_G0025870) #26	Pygb (MGP_PahariEiJ_G0025871) #27	Abhd12 (MGP_PahariEiJ_G0025872) #28	Gins1 (MGP_PahariEiJ_G0025873) #30	Ninl (MGP_PahariEiJ_G0025874) #31	MGP_PahariEiJ_G0025875 #32	MGP_PahariEiJ_G0025876 #32	Nsfl1c (MGP_PahariEiJ_G0025877)	MGP_PahariEiJ_G0025878	Sdcbp2 (MGP_PahariEiJ_G0025879)	Snph (MGP_PahariEiJ_G0025880)	Rad21l (MGP_PahariEiJ_G0025881)
Rat	MODERN SPECIES	13	AABR07027267.1 (ENSRNOG00000060618)	ENSRNOG00000070080	LOC100911984 (ENSRNOG00000064299)	LOC100362296 (ENSRNOG00000065228)	LOC102555578 (ENSRNOG00000065847)	LOC102555217 (ENSRNOG00000065630)	Rnaset2-ps1 (ENSRNOG00000005920)	LOC102555033 (ENSRNOG00000067040)	LOC102554315 (ENSRNOG00000067071)	AABR07054262.1 (ENSRNOG00000056526)	LOC102549291 (ENSRNOG00000069811)	ENSRNOG00000070867	ENSRNOG00000064151	LOC103690174 (ENSRNOG00000068068)	RGD1565143 (ENSRNOG00000055769)	Cst7 (ENSRNOG00000006767) #22	Apmap (ENSRNOG00000006795) #23	Acss1 (ENSRNOG00000007102) #24	Vsx1 (ENSRNOG00000042220) #25	Entpd6 (ENSRNOG00000007427) #26	Pygb (ENSRNOG00000007583) #27	Abhd12 (ENSRNOG00000036934) #28	Gins1 (ENSRNOG00000008091) #30	Ninl (ENSRNOG00000027747) #31	Nanp (ENSRNOG00000008307) #32	Nsfl1c (ENSRNOG00000008604)	Fkbp1a (ENSRNOG00000008822)	Sdcbp2 (ENSRNOG00000009528)	Snph (ENSRNOG00000009588)	Rad21l1 (ENSRNOG00000022335)	Tmem74b (ENSRNOG00000064442)
Upper Galilee mountains blind mole rat	MODERN SPECIES	689							Cst13 (ENSNGAG00000021135)	Cstdc2 (ENSNGAG00000020593)	Cst3 (ENSNGAG00000017018) ##18	Cst10 (ENSNGAG00000009191) ##18	Syndig1 (ENSNGAG00000006291) #21	Defb21 (ENSNGAG00000003549)	Defb19 (ENSNGAG00000001384)	ENSNGAG00000018092	Bpifb5 (ENSNGAG00000020339)	Cst7 (ENSNGAG00000014555) #22
Lesser Egyptian jerboa	MODERN SPECIES	149	Csnk2a1 (ENSJJAG00000012588)	Tcf15 (ENSJJAG00000010988)	Srxn1 (ENSJJAG00000009121)	Scrt2 (ENSJJAG00000001388)	Slc52a3 (ENSJJAG00000016352)	Fam110a (ENSJJAG00000004311)	Angpt4 (ENSJJAG00000005709)	Rspo4 (ENSJJAG00000018321)	ENSJJAG00000003196	Psmf1 (ENSJJAG00000013803)	Rad21l (ENSJJAG00000018022)	Snph (ENSJJAG00000009948)	Sdcbp2 (ENSJJAG00000022024)	ENSJJAG00000020158	Nsfl1c (ENSJJAG00000019288)	Cst7 (ENSJJAG00000015302) #22	Apmap (ENSJJAG00000012447) #23	Acss1 (ENSJJAG00000024008) #24	Vsx1 (ENSJJAG00000021822) #25	Entpd6 (ENSJJAG00000015511) #26	ENSJJAG00000010262	Pygb (ENSJJAG00000023294) #27	Abhd12 (ENSJJAG00000021468) #28	Gins1 (ENSJJAG00000016065) #30	ENSJJAG00000009691 #31	ENSJJAG00000021010 #31	ENSJJAG00000020337 #31	Nanp (ENSJJAG00000016600) #32	Syndig1 (ENSJJAG00000016150) #21
Kangaroo rat	MODERN SPECIES	418	Nkx2-4 (ENSDORG00000023542)	Nkx2-2 (ENSDORG00000007972)	Pax1 (ENSDORG00000016051)	Foxa2 (ENSDORG00000027269)	Sstr4 (ENSDORG00000010486) #7	Cd93 (ENSDORG00000028704) #9	Nxt1 (ENSDORG00000024690)	Gzf1 (ENSDORG00000011855) #11	Napb (ENSDORG00000011856) #12	Cst12 (ENSDORG00000023744) #15	Cst8 (ENSDORG00000011859) #16	Cst13 (ENSDORG00000027228)	Cst3 (ENSDORG00000027673) ##18	ENSDORG00000008948 ##18	Syndig1 (ENSDORG00000003111) #21	Cst7 (ENSDORG00000005298) #22	Apmap (ENSDORG00000025391) #23	Acss1 (ENSDORG00000004006) #24	Vsx1 (ENSDORG00000005490) #25	Entpd6 (ENSDORG00000007175) #26	Pygb (ENSDORG00000007176) #27	Abhd12 (ENSDORG00000007179) #28	ENSDORG00000010384 #30	Ninl (ENSDORG00000010386) #31	Nanp (ENSDORG00000029868) #32	ENSDORG00000005832	Mlh1 (ENSDORG00000005831)	Epm2aip1 (ENSDORG00000027253)	Trank1 (ENSDORG00000013295)	Dclk3 (ENSDORG00000029566)	Stac (ENSDORG00000005193)
Lagomorpha	ANCESTRAL SPECIES	248															ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Pika	MODERN SPECIES	4000																ENSOPRG00000009654 #22	APMAP (ENSOPRG00000009670) #23	ACSS1 (ENSOPRG00000009689) #24
Rabbit	MODERN SPECIES	474														ENSOCUG00000026879	SYNDIG1 (ENSOCUG00000025498) #21	CST7 (ENSOCUG00000025268) #22	APMAP (ENSOCUG00000027493) #23	ACSS1 (ENSOCUG00000013125) #24	ENTPD6 (ENSOCUG00000015930) #26	PYGB (ENSOCUG00000002790) #27	ENSOCUG00000030064	ABHD12 (ENSOCUG00000002798) #28	ENSOCUG00000015747 #30	NINL (ENSOCUG00000006288) #31	NANP (ENSOCUG00000002927) #32	ENSOCUG00000024869	ENSOCUG00000029482	ORYCUNV1R1534 (ENSOCUG00000030661)	ENSOCUG00000039676	ENSOCUG00000039655	ORYCUNV1R1596 (ENSOCUG00000038955)
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Eulipotyphla	ANCESTRAL SPECIES	941																ENSGT00940000160277 #22	ENSGT00440000039984.a #23
Common shrew	MODERN SPECIES	6343																ENSSARG00000010188 #22	ENSSARG00000010207 #23
Hedgehog	MODERN SPECIES	8389																ENSEEUG00000001357 #22	APMAP (ENSEEUG00000001364) #23
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Microbat	MODERN SPECIES	1151	CD93 (ENSMLUG00000011185) #9	NXT1 (ENSMLUG00000006881)	GZF1 (ENSMLUG00000002194) #11	NAPB (ENSMLUG00000002203) #12	CSTL1 (ENSMLUG00000002210) #13	CST11 (ENSMLUG00000002218) #14	ENSMLUG00000028493	CST8 (ENSMLUG00000002227) #16	ENSMLUG00000024267	ENSMLUG00000007975	CST3 (ENSMLUG00000028312) #18	ENSMLUG00000010298	ENSMLUG00000026533	ENSMLUG00000011668	SYNDIG1 (ENSMLUG00000012716) #21	CST7 (ENSMLUG00000004912) #22	APMAP (ENSMLUG00000010717) #23	ACSS1 (ENSMLUG00000000710) #24	ENTPD6 (ENSMLUG00000009410) #26	PYGB (ENSMLUG00000009430) #27	ABHD12 (ENSMLUG00000009465) #28	GINS1 (ENSMLUG00000000885) #30	NINL (ENSMLUG00000000892) #31	NANP (ENSMLUG00000017312) #32
Greater horseshoe bat	MODERN SPECIES	15													ENSRFEG00010012588	ENSRFEG00010012569	SYNDIG1 (ENSRFEG00010012536) #21	CST7 (ENSRFEG00010012468) #22	APMAP (ENSRFEG00010012419) #23	ACSS1 (ENSRFEG00010012326) #24	VSX1 (ENSRFEG00010012058) #25	ENTPD6 (ENSRFEG00010011594) #26	ENSRFEG00010011488 #27	ABHD12 (ENSRFEG00010011429) #28	GINS1 (ENSRFEG00010011337) #30	NINL (ENSRFEG00010011279) #31	NANP (ENSRFEG00010011232) #32	CST3 (ENSRFEG00010011121) #18	CST9L (ENSRFEG00010011055)	ENSRFEG00010011001	ENSRFEG00010010952	CST11 (ENSRFEG00010010901) #14	CSTL1 (ENSRFEG00010010843) #13
Megabat	MODERN SPECIES	4987																CST7 (ENSPVAG00000011465) #22
Equus	ANCESTRAL SPECIES	8	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT00390000003094 #32	ENSGT00660000095541.a.a #31	ENSGT00390000013968 #30	ENSGT00940000160517 #28	ENSGT00950000183148.b.b #27	ENSGT01100000263540.A.a #26
Donkey	MODERN SPECIES	6	FOXA2 (ENSEASG00005002535)	SSTR4 (ENSEASG00005002540) #7	THBD (ENSEASG00005027531) #8	CD93 (ENSEASG00005002547) #9	NXT1 (ENSEASG00005033641)	GZF1 (ENSEASG00005002557) #11	NAPB (ENSEASG00005002564) #12	CSTL1 (ENSEASG00005002572) #13	CST11 (ENSEASG00005002576) #14	ENSEASG00005031840	CST8 (ENSEASG00005030555) #16	ENSEASG00005025391	ENSEASG00005027176	ENSEASG00005002598 #18	ENSEASG00005002614 #21	CST7 (ENSEASG00005029197) #22	APMAP (ENSEASG00005002617) #23	ACSS1 (ENSEASG00005002623) #24	ENSEASG00005030814 #25	ENSEASG00005033023	ENSEASG00005024200	ENSEASG00005031105 #32	NINL (ENSEASG00005003350) #31	GINS1 (ENSEASG00005003329) #30	ABHD12 (ENSEASG00005003318) #28	PYGB (ENSEASG00005003306) #27	ENSEASG00005003299 #26
Horse	MODERN SPECIES	14	FOXA2 (ENSECAG00000032004)	THBD (ENSECAG00000005241) #8	CD93 (ENSECAG00000016324) #9	NXT1 (ENSECAG00000035032)	GZF1 (ENSECAG00000011343) #11	NAPB (ENSECAG00000022016) #12	CSTL1 (ENSECAG00000019672) #13	CST11 (ENSECAG00000016342) #14	ENSECAG00000014988 ##15	CST8 (ENSECAG00000029932) #16	CST9L (ENSECAG00000010654)	ENSECAG00000045045	CST3 (ENSECAG00000038893) #18	SYNDIG1 (ENSECAG00000006421) #21	ENSECAG00000050617	CST7 (ENSECAG00000000268) #22	APMAP (ENSECAG00000014524) #23	ACSS1 (ENSECAG00000023870) #24	ENSECAG00000042915	ENSECAG00000056853	NANP (ENSECAG00000039564) #32	NINL (ENSECAG00000019590) #31	ENSECAG00000053094	GINS1 (ENSECAG00000026939) #30	ENSECAG00000033721	ABHD12 (ENSECAG00000005769) #28	PYGB (ENSECAG00000022048) #27	ENTPD6 (ENSECAG00000013042) #26	ENSECAG00000003028 #25
Carnivora	ANCESTRAL SPECIES	20	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.n	ENSGT00940000154755.e.a #18	ENSGT00940000163410 #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00950000182865.b.a.b.b.a.b	ENSGT00940000163249	ENSGT00940000161877.n	ENSGT00940000154755.e.a #18	ENSGT00940000163410.k #19	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183003.a.a.b	ENSGT00940000155238	ENSGT00940000160405	ENSGT00940000153259.a.b	ENSGT00390000000217	ENSGT00940000154389.a
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00950000182865.b.a.b.b.a.b	ENSGT00940000163249	ENSGT00940000161877.n	ENSGT00940000154755.e.a #18	ENSGT00940000163410.k #19	ENSGT00940000154755.e.b #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183003.a.a.b	ENSGT00940000155238	ENSGT00940000160405	ENSGT00940000153259.a.b	ENSGT00390000000217	ENSGT00940000154389.a
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00950000182865.b.a.b.b.a.b	ENSGT00940000163249	ENSGT00940000161877.n	ENSGT00940000154755.e.a #18	ENSGT00940000163410.k #19	ENSGT00940000154755.e.b #18	ENSGT00950000183147.B #21	ENSGT00940000157034.kb	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183003.a.a.b	ENSGT00940000155238	ENSGT00940000160405	ENSGT00940000153259.a.b	ENSGT00390000000217	ENSGT00940000154389.a
lion	MODERN SPECIES	3	CD93 (ENSPLOG00000000855) #9	NXT1 (ENSPLOG00000000844)	GZF1 (ENSPLOG00000000839) #11	NAPB (ENSPLOG00000000809) #12	CSTL1 (ENSPLOG00000000776) #13	CST11 (ENSPLOG00000000758) #14	ENSPLOG00000000735 ##15	ENSPLOG00000000715	CST8 (ENSPLOG00000000695) #16	ENSPLOG00000000686	CST9L (ENSPLOG00000000670)	CST3 (ENSPLOG00000000650) #18	ENSPLOG00000000559 #19	SYNDIG1 (ENSPLOG00000000543) #21	ENSPLOG00000000534	CST7 (ENSPLOG00000000513) #22	APMAP (ENSPLOG00000000494) #23	ACSS1 (ENSPLOG00000000456) #24	VSX1 (ENSPLOG00000000431) #25	ENTPD6 (ENSPLOG00000000325) #26	PYGB (ENSPLOG00000000286) #27	ABHD12 (ENSPLOG00000000259) #28	GINS1 (ENSPLOG00000000243) #30	ENSPLOG00000000237	NINL (ENSPLOG00000000216) #31	NANP (ENSPLOG00000000195) #32	SOWAHC (ENSPLOG00000000181)	SEPTIN10 (ENSPLOG00000000161)	SH3RF3 (ENSPLOG00000000136)	EDAR (ENSPLOG00000000113)	CCDC138 (ENSPLOG00000020856)
leopard	MODERN SPECIES	208																CST7 (ENSPPRG00000003000) #22	APMAP (ENSPPRG00000002994) #23	ACSS1 (ENSPPRG00000002978) #24	VSX1 (ENSPPRG00000002878) #25	ENTPD6 (ENSPPRG00000002863) #26	PYGB (ENSPPRG00000002716) #27	ABHD12 (ENSPPRG00000002701) #28	GINS1 (ENSPPRG00000002684) #30	NANP (ENSPPRG00000002568) #32
Tiger	MODERN SPECIES	535	SSTR4 (ENSPTIG00000003769) #7	CD93 (ENSPTIG00000018580) #9	NXT1 (ENSPTIG00000003788)	GZF1 (ENSPTIG00000019328) #11	NAPB (ENSPTIG00000019947) #12	ENSPTIG00000001355	CST11 (ENSPTIG00000003091) #14	ENSPTIG00000005550 ##15	ENSPTIG00000005641	CST8 (ENSPTIG00000006377) #16	ENSPTIG00000007155	CST9L (ENSPTIG00000007266)	ENSPTIG00000007325 #19	ENSPTIG00000007645 #19	SYNDIG1 (ENSPTIG00000008709) #21	CST7 (ENSPTIG00000009188) #22	APMAP (ENSPTIG00000009330) #23	ACSS1 (ENSPTIG00000010066) #24	ENSPTIG00000004550	VSX1 (ENSPTIG00000012183) #25	ENTPD6 (ENSPTIG00000013005) #26	PYGB (ENSPTIG00000014087) #27	ABHD12 (ENSPTIG00000016315) #28	GINS1 (ENSPTIG00000017055) #30	NANP (ENSPTIG00000020107) #32
Cat	MODERN SPECIES	2	CD93 (ENSFCAG00000025238) #9	NXT1 (ENSFCAG00000006482)	GZF1 (ENSFCAG00000006484) #11	NAPB (ENSFCAG00000037279) #12	CSTL1 (ENSFCAG00000041684) #13	CST11 (ENSFCAG00000003949) #14	ENSFCAG00000026179 ##15	ENSFCAG00000042989	CST8 (ENSFCAG00000023255) #16	ENSFCAG00000023071	ENSFCAG00000027887	ENSFCAG00000030881	CST3 (ENSFCAG00000038525) #18	ENSFCAG00000035754 #19	SYNDIG1 (ENSFCAG00000033652) #21	CST7 (ENSFCAG00000014543) #22	APMAP (ENSFCAG00000030449) #23	ACSS1 (ENSFCAG00000014545) #24	ENSFCAG00000031750	VSX1 (ENSFCAG00000014546) #25	ENTPD6 (ENSFCAG00000027966) #26	PYGB (ENSFCAG00000008415) #27	ABHD12 (ENSFCAG00000008419) #28	GINS1 (ENSFCAG00000042801) #30	NINL (ENSFCAG00000005402) #31	NANP (ENSFCAG00000036408) #32	SOWAHC (ENSFCAG00000022998)	SEPTIN10 (ENSFCAG00000001967)	SH3RF3 (ENSFCAG00000029081)	EDAR (ENSFCAG00000012594)	CCDC138 (ENSFCAG00000030803)
Caniformia	ANCESTRAL SPECIES		ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.m	ENSGT00940000161877.n	ENSGT00940000154755.e.a #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a
Canidae	ANCESTRAL SPECIES	24													ENSGT00940000161877.n	ENSGT00940000154755.e.a #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a
Canis_lupus	ANCESTRAL SPECIES	27													ENSGT00940000161877.n	ENSGT00940000154755.e.a #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094.c #32	ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a
Dog	MODERN SPECIES	15									ENSCAFG00845028258	ENSCAFG00845028282	ENSCAFG00845028318	ENSCAFG00845028353 #18	SYNDIG1 (ENSCAFG00845028405) #21	ENSCAFG00845028430	ENSCAFG00845028470	ENSCAFG00845028509 #22	APMAP (ENSCAFG00845028549) #23	ACSS1 (ENSCAFG00845028598) #24	VSX1 (ENSCAFG00845028643) #25	ENTPD6 (ENSCAFG00845028707) #26	PYGB (ENSCAFG00845028916) #27	ABHD12 (ENSCAFG00845028992) #28	ENSCAFG00845029035	GINS1 (ENSCAFG00845029067) #30	NINL (ENSCAFG00845029110) #31	NANP (ENSCAFG00845029217) #32	ENSCAFG00845029250	ENSCAFG00845019227	ZNF445 (ENSCAFG00845019305)	ENSCAFG00845019385	ENSCAFG00845019630
Dingo	MODERN SPECIES	326										CST9L (ENSCAFG00020006315)	ENSCAFG00020006310 #18	ENSCAFG00020006309	SYNDIG1 (ENSCAFG00020006293) #21	ENSCAFG00020006286	ENSCAFG00020006285	CST7 (ENSCAFG00020006277) #22	APMAP (ENSCAFG00020006264) #23	ACSS1 (ENSCAFG00020005947) #24	VSX1 (ENSCAFG00020005925) #25	ENTPD6 (ENSCAFG00020005916) #26	PYGB (ENSCAFG00020005902) #27	ENSCAFG00020005810 #28	GINS1 (ENSCAFG00020005786) #30	NINL (ENSCAFG00020005723) #31	ENSCAFG00020005719 #32	ENSCAFG00020005712	ENSCAFG00020005711	ZNF445 (ENSCAFG00020005703)	TCAIM (ENSCAFG00020005698)	TOPAZ1 (ENSCAFG00020005672)	ENSCAFG00020005662
Red fox	MODERN SPECIES	122													ENSVVUG00000022490 #18	SYNDIG1 (ENSVVUG00000022475) #21	ENSVVUG00000022444	CST7 (ENSVVUG00000022440) #22	APMAP (ENSVVUG00000022438) #23	ACSS1 (ENSVVUG00000022431) #24	ENSVVUG00000022428 #25	ENTPD6 (ENSVVUG00000022415) #26	PYGB (ENSVVUG00000022373) #27	ABHD12 (ENSVVUG00000022271) #28	GINS1 (ENSVVUG00000022265) #30	NINL (ENSVVUG00000022254) #31	ENSVVUG00000022250	NANP (ENSVVUG00000022249) #32	ZKSCAN7 (ENSVVUG00000022246)	ENSVVUG00000022234	ZNF445 (ENSVVUG00000022223)	TCAIM (ENSVVUG00000022195)	TOPAZ1 (ENSVVUG00000022169)
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.m.b	ENSGT00940000161877.n	ENSGT00940000161877.m.a	ENSGT00940000154755.e.a #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a
Mustelinae	ANCESTRAL SPECIES	43	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.n	ENSGT00940000161877.m.a	ENSGT00940000154755.e.a #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24
American mink	MODERN SPECIES	392															SYNDIG1 (ENSNVIG00000007628) #21	CYTF (ENSNVIG00000007712) #22	APMAP (ENSNVIG00000007822) #23	ACSS1 (ENSNVIG00000007966) #24	ENSNVIG00000008026	ENSNVIG00000008047
Ferret	MODERN SPECIES	204	SSTR4 (ENSMPUG00000019271) #7	THBD (ENSMPUG00000019265) #8	CD93 (ENSMPUG00000001163) #9	NXT1 (ENSMPUG00000019260)	GZF1 (ENSMPUG00000001160) #11	NAPB (ENSMPUG00000001158) #12	CST11 (ENSMPUG00000001154) #14	ENSMPUG00000001151	CST8 (ENSMPUG00000001143) #16	ENSMPUG00000001140	ENSMPUG00000001138	ENSMPUG00000001137	CST3 (ENSMPUG00000001122) #18	ENSMPUG00000001119	SYNDIG1 (ENSMPUG00000001115) #21	CST7 (ENSMPUG00000001114) #22	APMAP (ENSMPUG00000001112) #23	ACSS1 (ENSMPUG00000001109) #24	ENSMPUG00000001101
Ursidae	ANCESTRAL SPECIES	64															ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00660000095541.a.a #31	ENSGT00390000013968 #30	ENSGT00390000003094 #32
Giant Panda	MODERN SPECIES	16	ATAD1 (ENSAMEG00000000672)	ENSAMEG00000000606	ENSAMEG00000000595	ENSAMEG00000000577	ENSAMEG00000000551	ENSAMEG00000000523	CSTF2T (ENSAMEG00000028492)	PRKG1 (ENSAMEG00000003362)	DKK1 (ENSAMEG00000003369)	ENSAMEG00000025693	PCDH15 (ENSAMEG00000015978)	ENSAMEG00000005342	ENSAMEG00000030632	ENSAMEG00000030010 #18	ENSAMEG00000000530 #21	CST7 (ENSAMEG00000014248) #22	APMAP (ENSAMEG00000014230) #23	ACSS1 (ENSAMEG00000014206) #24	ENSAMEG00000003561 #26	PYGB (ENSAMEG00000003436) #27	ABHD12 (ENSAMEG00000003400) #28	ENSAMEG00000028823 #31	ENSAMEG00000001886	ENSAMEG00000026067	ENSAMEG00000009413	TOPAZ1 (ENSAMEG00000027745)	ABHD5 (ENSAMEG00000015600)	ENSAMEG00000015613	ENSAMEG00000005957	ENSAMEG00000002236	UBP1 (ENSAMEG00000002341)
Ursus	ANCESTRAL SPECIES	313															ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24
American black bear	MODERN SPECIES	7117																CST7 (ENSUAMG00000024982) #22
Polar bear	MODERN SPECIES	271															SYNDIG1 (ENSUMAG00000012097) #21	ENSUMAG00000012087 #22	APMAP (ENSUMAG00000012073) #23	ACSS1 (ENSUMAG00000011645) #24
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Suina	ANCESTRAL SPECIES	9	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160795	ENSGT00940000157511	ENSGT00940000159443	ENSGT00940000157626	ENSGT00510000049120	ENSGT00390000013178
Chacoan peccary	MODERN SPECIES	801	PAX1 (ENSCWAG00000008052)	FOXA2 (ENSCWAG00000007985)	THBD (ENSCWAG00000017996) #8	CD93 (ENSCWAG00000017965) #9	NXT1 (ENSCWAG00000017956)	GZF1 (ENSCWAG00000017910) #11	NAPB (ENSCWAG00000017225) #12	CSTL1 (ENSCWAG00000017189) #13	CST11 (ENSCWAG00000017158) #14	ENSCWAG00000017127	CST8 (ENSCWAG00000017086) #16	ENSCWAG00000017060	ENSCWAG00000017004	CST3 (ENSCWAG00000016979) #18	SYNDIG1 (ENSCWAG00000016959) #21	CST7 (ENSCWAG00000016930) #22	APMAP (ENSCWAG00000016906) #23	ACSS1 (ENSCWAG00000016802) #24	VSX1 (ENSCWAG00000016751) #25	ENTPD6 (ENSCWAG00000016646) #26	PYGB (ENSCWAG00000016599) #27	ABHD12 (ENSCWAG00000016565) #28	GINS1 (ENSCWAG00000016501) #30	NINL (ENSCWAG00000016442) #31	NANP (ENSCWAG00000016415) #32	ADRA1D (ENSCWAG00000016385)	SMOX (ENSCWAG00000016321)	RNF24 (ENSCWAG00000016269)	PANK2 (ENSCWAG00000016218)	MAVS (ENSCWAG00000016195)	AP5S1 (ENSCWAG00000016155)
Pig	MODERN SPECIES	8	PAX1 (ENSSSCG00000007112)	FOXA2 (ENSSSCG00000007114)	THBD (ENSSSCG00000053422) #8	CD93 (ENSSSCG00000007116) #9	NXT1 (ENSSSCG00000007119)	GZF1 (ENSSSCG00000007117) #11	NAPB (ENSSSCG00000031219) #12	CSTL1 (ENSSSCG00000007121) #13	CST11 (ENSSSCG00000007122) #14	ENSSSCG00000007123	ENSSSCG00000007124 #16	ENSSSCG00000007125	CST9L (ENSSSCG00000029289)	CST3 (ENSSSCG00000037360) #18	SYNDIG1 (ENSSSCG00000007130) #21	CST7 (ENSSSCG00000007131) #22	APMAP (ENSSSCG00000036286) #23	ACSS1 (ENSSSCG00000007133) #24	VSX1 (ENSSSCG00000023887) #25	ENTPD6 (ENSSSCG00000027070) #26	PYGB (ENSSSCG00000022815) #27	ABHD12 (ENSSSCG00000040449) #28	GINS1 (ENSSSCG00000034913) #30	ENSSSCG00000007135 #31	NANP (ENSSSCG00000053479) #32	ENSSSCG00000035283	ENSSSCG00000063198	ADRA1D (ENSSSCG00000007139)	SMOX (ENSSSCG00000007140)	RNF24 (ENSSSCG00000059435)	PANK2 (ENSSSCG00000007142)
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.i	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000182767.b.a.b.b.a	ENSGT00390000007046.b.a.a.fb	ENSGT00940000162838	ENSGT00940000159704	ENSGT00940000157404	ENSGT00940000161298
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000182767.b.a.b.b.a	ENSGT00390000007046.b.a.a.fb	ENSGT00940000162977	ENSGT00940000157404	ENSGT00940000159704	ENSGT00940000161298
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000182767.b.a.b.b.a	ENSGT00390000007046.b.a.a.fb	ENSGT00940000162977	ENSGT00940000157404	ENSGT00940000159704	ENSGT00940000161298
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000182767.b.a.b.b.a	ENSGT00390000007046.b.a.a.fb	ENSGT00940000162977	ENSGT00940000157404	ENSGT00940000159704	ENSGT00940000161298
Dolphin	MODERN SPECIES	2301																ENSTTRG00000001629 #22	APMAP (ENSTTRG00000001630) #23	ACSS1 (ENSTTRG00000001631) #24	VSX1 (ENSTTRG00000001632) #25	ENTPD6 (ENSTTRG00000001633) #26	PYGB (ENSTTRG00000001634) #27	ABHD12 (ENSTTRG00000001636) #28	GINS1 (ENSTTRG00000001637) #30	ENSTTRG00000001638 #31
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000182767.b.a.b.b.a	ENSGT00390000007046.b.a.a.fb	ENSGT00940000162977	ENSGT01010000228897	ENSGT00940000159704	ENSGT00940000157404
Vaquita	MODERN SPECIES	6	XRN2 (ENSPSNG00000004918)	NKX2-4 (ENSPSNG00000004868)	NKX2-2 (ENSPSNG00000004832)	PAX1 (ENSPSNG00000004773)	FOXA2 (ENSPSNG00000004696)	SSTR4 (ENSPSNG00000011467) #7	THBD (ENSPSNG00000011441) #8	CD93 (ENSPSNG00000011407) #9	NXT1 (ENSPSNG00000011355)	GZF1 (ENSPSNG00000011314) #11	ENSPSNG00000011208 #12	ENSPSNG00000011147	ENSPSNG00000011009	CST3 (ENSPSNG00000010957) #18	SYNDIG1 (ENSPSNG00000010897) #21	CST7 (ENSPSNG00000010836) #22	APMAP (ENSPSNG00000010757) #23	ACSS1 (ENSPSNG00000010625) #24	VSX1 (ENSPSNG00000010521) #25	ENTPD6 (ENSPSNG00000010051) #26	PYGB (ENSPSNG00000009852) #27	ABHD12 (ENSPSNG00000009768) #28	GINS1 (ENSPSNG00000009717) #30	ENSPSNG00000009688 #31	ENSPSNG00000009624 #32	OTOR (ENSPSNG00000009573)	SNRPB2 (ENSPSNG00000009531)	ENSPSNG00000009313	ENSPSNG00000009177	FLRT3 (ENSPSNG00000009154)	MACROD2 (ENSPSNG00000009064)
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000182767.b.a.b.b.a	ENSGT00390000007046.b.a.a.fb	ENSGT00390000007741.a.c.b	ENSGT00940000162977	ENSGT01010000228897	ENSGT00940000159704
Narwhal	MODERN SPECIES	299	NKX2-2 (ENSMMNG00015013937)	PAX1 (ENSMMNG00015013924)	FOXA2 (ENSMMNG00015013909)	SSTR4 (ENSMMNG00015013888) #7	THBD (ENSMMNG00015013881) #8	CD93 (ENSMMNG00015013869) #9	NXT1 (ENSMMNG00015013866)	GZF1 (ENSMMNG00015013857) #11	ENSMMNG00015013840 #12	CSTL1 (ENSMMNG00015013827) #13	CST11 (ENSMMNG00015013816) #14	ENSMMNG00015013807	ENSMMNG00015013782	CST3 (ENSMMNG00015013767) #18	SYNDIG1 (ENSMMNG00015013754) #21	CST7 (ENSMMNG00015013746) #22	APMAP (ENSMMNG00015013737) #23	ACSS1 (ENSMMNG00015013713) #24	VSX1 (ENSMMNG00015013692) #25	ENTPD6 (ENSMMNG00015013636) #26	PYGB (ENSMMNG00015013588) #27	ABHD12 (ENSMMNG00015013554) #28	GINS1 (ENSMMNG00015013542) #30	ENSMMNG00015013530 #31	NANP (ENSMMNG00015013521) #32	OTOR (ENSMMNG00015013507)	SNRPB2 (ENSMMNG00015013493)	ENSMMNG00015013482	ENSMMNG00015013413	ENSMMNG00015013374	FLRT3 (ENSMMNG00015013368)
Beluga whale	MODERN SPECIES	48	PAX1 (ENSDLEG00000005123)	FOXA2 (ENSDLEG00000005115)	SSTR4 (ENSDLEG00000005108) #7	THBD (ENSDLEG00000005104) #8	CD93 (ENSDLEG00000005100) #9	NXT1 (ENSDLEG00000005096)	GZF1 (ENSDLEG00000005091) #11	ENSDLEG00000005080 #12	CSTL1 (ENSDLEG00000005075) #13	CST11 (ENSDLEG00000005067) #14	ENSDLEG00000005044 ##15	ENSDLEG00000005035	ENSDLEG00000005018	CST3 (ENSDLEG00000004985) #18	SYNDIG1 (ENSDLEG00000004982) #21	CST7 (ENSDLEG00000004970) #22	APMAP (ENSDLEG00000004961) #23	ACSS1 (ENSDLEG00000004910) #24	VSX1 (ENSDLEG00000004879) #25	ENTPD6 (ENSDLEG00000004868) #26	PYGB (ENSDLEG00000004842) #27	ABHD12 (ENSDLEG00000004821) #28	GINS1 (ENSDLEG00000004814) #30	ENSDLEG00000004804 #31	NANP (ENSDLEG00000004799) #32	OTOR (ENSDLEG00000004794)	SNRPB2 (ENSDLEG00000004783)	KIF16B (ENSDLEG00000020641)	ENSDLEG00000020625	ENSDLEG00000020618	ENSDLEG00000020611
Sperm whale	MODERN SPECIES	5	NKX2-4 (ENSPCTG00005009959)	NKX2-2 (ENSPCTG00005009931)	PAX1 (ENSPCTG00005009858)	FOXA2 (ENSPCTG00005009780)	SSTR4 (ENSPCTG00005009716) #7	CD93 (ENSPCTG00005009671) #9	CST3 (ENSPCTG00005009637) #18	ENSPCTG00005009585	ENSPCTG00005009530	ENSPCTG00005009487	ENSPCTG00005009442 ##15	CST11 (ENSPCTG00005009381) #14	CSTL1 (ENSPCTG00005009306) #13	ENSPCTG00005009273 #12	ENSPCTG00005009228 #21	CST7 (ENSPCTG00005009166) #22	APMAP (ENSPCTG00005009088) #23	ENSPCTG00005009058 #24	VSX1 (ENSPCTG00005008966) #25	ENTPD6 (ENSPCTG00005008559) #26	ABHD12 (ENSPCTG00005008481) #28	GINS1 (ENSPCTG00005008454) #30	OTOR (ENSPCTG00005008309)	SNRPB2 (ENSPCTG00005008280)	ENSPCTG00005008258	KIF16B (ENSPCTG00005007936)	FLRT3 (ENSPCTG00005007859)	MACROD2 (ENSPCTG00005007778)	SEL1L2 (ENSPCTG00005007423)	NDUFAF5 (ENSPCTG00005007331)	ESF1 (ENSPCTG00005007279)
Blue whale	MODERN SPECIES	6	CD93 (ENSBMSG00010012595) #9	NXT1 (ENSBMSG00010012589)	ENSBMSG00010012580 #11	ENSBMSG00010012568 #11	NAPB (ENSBMSG00010012544) #12	CSTL1 (ENSBMSG00010012521) #13	CST11 (ENSBMSG00010012502) #14	ENSBMSG00010012491 ##15	ENSBMSG00010012475	CST8 (ENSBMSG00010012422) #16	ENSBMSG00010012402	ENSBMSG00010012390	ENSBMSG00010012375	CST3 (ENSBMSG00010012360) #18	SYNDIG1 (ENSBMSG00010012350) #21	CST7 (ENSBMSG00010012340) #22	APMAP (ENSBMSG00010012326) #23	ACSS1 (ENSBMSG00010012293) #24	VSX1 (ENSBMSG00010012276) #25	ENSBMSG00010012263	ENTPD6 (ENSBMSG00010012199) #26	PYGB (ENSBMSG00010012160) #27	ABHD12 (ENSBMSG00010012129) #28	GINS1 (ENSBMSG00010012115) #30	ENSBMSG00010012105 #31	ENSBMSG00010012091 #32	OTOR (ENSBMSG00010012080)	SNRPB2 (ENSBMSG00010012064)	ENSBMSG00010012034	FLRT3 (ENSBMSG00010011999)	MACROD2 (ENSBMSG00010011961)
Pecora	ANCESTRAL SPECIES	9	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.i	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a	ENSGT00950000182994.B.a.b.e.a.b	ENSGT00530000063735.b	ENSGT00940000160326	ENSGT00950000183739	ENSGT00940000163406	ENSGT00940000155849	ENSGT00940000162594	ENSGT00940000160568.m
Yarkand deer	MODERN SPECIES	15	CD93 (ENSCHYG00000023556) #9	NXT1 (ENSCHYG00000023576)	GZF1 (ENSCHYG00000023598) #11	NAPB (ENSCHYG00000023659) #12	ENSCHYG00000023804 #13	ENSCHYG00000023824 #14	ENSCHYG00000023860 ##15	ENSCHYG00000023874	ENSCHYG00000023900 #16	ENSCHYG00000023931	ENSCHYG00000023958	ENSCHYG00000023998	CST3 (ENSCHYG00000024014) #18	SYNDIG1 (ENSCHYG00000024042) #21	APMAP (ENSCHYG00000024095) #23	ENSCHYG00000024206 #22	ACSS1 (ENSCHYG00000024231) #24	VSX1 (ENSCHYG00000024285) #25	ENTPD6 (ENSCHYG00000024367) #26	PYGB (ENSCHYG00000024495) #27	ABHD12 (ENSCHYG00000024569) #28	ENSCHYG00000013693	GDI2 (ENSCHYG00000013832)	TASOR2 (ENSCHYG00000014279)	ASB13 (ENSCHYG00000014908)	CALML5 (ENSCHYG00000015185)	ENSCHYG00000015219	NET1 (ENSCHYG00000015284)	TUBAL3 (ENSCHYG00000015848)	UCN3 (ENSCHYG00000015962)	ENSCHYG00000016140
Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.i	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a	ENSGT00950000182994.B.a.b.e.a.b	ENSGT00530000063735.b	ENSGT00940000160326	ENSGT00950000183739	ENSGT00940000163406	ENSGT00940000155849	ENSGT00940000162594	ENSGT00940000160568.m
Siberian musk deer	MODERN SPECIES	1194	FOXA2 (ENSMMSG00000018910)	THBD (ENSMMSG00000018897) #8	CD93 (ENSMMSG00000018871) #9	NXT1 (ENSMMSG00000018866)	GZF1 (ENSMMSG00000018836) #11	NAPB (ENSMMSG00000018763) #12	CSTL1 (ENSMMSG00000018731) #13	ENSMMSG00000018712 #14	ENSMMSG00000018676 ##15	ENSMMSG00000018653	CST8 (ENSMMSG00000018626) #16	ENSMMSG00000018603	ENSMMSG00000018584	CST3 (ENSMMSG00000018564) #18	SYNDIG1 (ENSMMSG00000018548) #21	CST7 (ENSMMSG00000018529) #22	APMAP (ENSMMSG00000018481) #23	ACSS1 (ENSMMSG00000018444) #24	VSX1 (ENSMMSG00000018374) #25	ENTPD6 (ENSMMSG00000018269) #26	PYGB (ENSMMSG00000018208) #27	ABHD12 (ENSMMSG00000018158) #28	ANKRD16 (ENSMMSG00000018094)	ENSMMSG00000017856	TASOR2 (ENSMMSG00000017630)	ASB13 (ENSMMSG00000017589)	ENSMMSG00000017556	NET1 (ENSMMSG00000017503)	TUBAL3 (ENSMMSG00000017448)	UCN3 (ENSMMSG00000017437)	ENSMMSG00000017397
Bovidae	ANCESTRAL SPECIES	10	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.i	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a	ENSGT00950000182994.B.a.b.e.a.b.a	ENSGT00530000063735.b	ENSGT00940000160326	ENSGT00950000183739	ENSGT00940000163406	ENSGT00940000155849	ENSGT00940000162594	ENSGT00940000160568.m
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a	ENSGT00950000182994.B.a.b.e.b	ENSGT00950000182994.B.a.b.e.a.b.a	ENSGT00530000063735.b	ENSGT00940000160326	ENSGT00950000183739	ENSGT00940000163406	ENSGT00940000155849	ENSGT00940000162594
Bos	ANCESTRAL SPECIES	22	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554.jb #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a	ENSGT00950000182994.B.a.b.e.b	ENSGT00390000003289.g.b	ENSGT00950000182994.B.a.b.e.a.b.b.b	ENSGT00530000063735.b	ENSGT00940000160326	ENSGT00950000183739	ENSGT00940000163406	ENSGT00940000155849
Bos_a	ANCESTRAL SPECIES	7	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554.jb #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a	ENSGT00950000182994.B.a.b.e.b	ENSGT00390000003289.g.b	ENSGT00950000182994.B.a.b.e.a.b.b.b	ENSGT00530000063735.b	ENSGT00940000160326	ENSGT00950000183739	ENSGT00940000163406	ENSGT00940000155849
Wild yak	MODERN SPECIES	1228															SYNDIG1 (ENSBMUG00000005390) #21	CST7 (ENSBMUG00000005404) #22	ENSBMUG00000005410 #23
Domestic yak	MODERN SPECIES	3	CD93 (ENSBGRG00000006986) #9	ENSBGRG00000007043	NXT1 (ENSBGRG00000007076)	ENSBGRG00000007097 #11	ENSBGRG00000007150 #11	NAPB (ENSBGRG00000007201) #12	CSTL1 (ENSBGRG00000007456) #13	ENSBGRG00000007520 #14	ENSBGRG00000007612 ##15	ENSBGRG00000007655	CST8 (ENSBGRG00000007704) #16	ENSBGRG00000007774	ENSBGRG00000007806	CST3 (ENSBGRG00000007838) #18	SYNDIG1 (ENSBGRG00000007905) #21	CST7 (ENSBGRG00000008014) #22	APMAP (ENSBGRG00000008063) #23	ACSS1 (ENSBGRG00000008277) #24	VSX1 (ENSBGRG00000008489) #25	ENTPD6 (ENSBGRG00000008602) #26	PYGB (ENSBGRG00000008678) #27	ABHD12 (ENSBGRG00000008988) #28	ANKRD16 (ENSBGRG00000009203)	ENSBGRG00000009324	ENSBGRG00000009364	TASOR2 (ENSBGRG00000009524)	ASB13 (ENSBGRG00000010215)	NET1 (ENSBGRG00000010362)	TUBAL3 (ENSBGRG00000010624)	UCN3 (ENSBGRG00000010758)	ENSBGRG00000010844
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554.jb #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a	ENSGT00390000003289.g.b	ENSGT00950000182994.B.a.b.e.a.b.b.b	ENSGT00950000182994.B.a.b.e.a.b.a	ENSGT00530000063735.b	ENSGT00940000160326	ENSGT00940000163406	ENSGT00940000155849	ENSGT00940000162594
Hybrid Bos Indicus	MODERN SPECIES	4	THBD (ENSBIXG00005010640) #8	ENSBIXG00005000916	CD93 (ENSBIXG00005010666) #9	NXT1 (ENSBIXG00005010690)	GZF1 (ENSBIXG00005010698) #11	NAPB (ENSBIXG00005000942) #12	ENSBIXG00005000943 #13	ENSBIXG00005010800 #14	ENSBIXG00005000950 ##15	ENSBIXG00005010816	CST8 (ENSBIXG00005006779) #16	ENSBIXG00005000954	ENSBIXG00005010849	ENSBIXG00005010878 #18	SYNDIG1 (ENSBIXG00005010911) #21	CST7 (ENSBIXG00005000982) #22	APMAP (ENSBIXG00005010989) #23	ACSS1 (ENSBIXG00005011033) #24	VSX1 (ENSBIXG00005011089) #25	ENTPD6 (ENSBIXG00005011132) #26	PYGB (ENSBIXG00005011231) #27	ABHD12 (ENSBIXG00005011264) #28	ANKRD16 (ENSBIXG00005011301)	ENSBIXG00005011317	ENSBIXG00005011350	TASOR2 (ENSBIXG00005011497)	ASB13 (ENSBIXG00005001128)	NET1 (ENSBIXG00005001148)	TUBAL3 (ENSBIXG00005011711)	UCN3 (ENSBIXG00005011732)	ENSBIXG00005011761
Cow	MODERN SPECIES	4	ENSBTAG00000035643	PAX1 (ENSBTAG00000006742)	FOXA2 (ENSBTAG00000012407)	THBD (ENSBTAG00000048591) #8	CD93 (ENSBTAG00000004207) #9	NXT1 (ENSBTAG00000004993)	GZF1 (ENSBTAG00000008908) #11	NAPB (ENSBTAG00000032704) #12	ENSBTAG00000027420	MGC133636 (ENSBTAG00000013416) ##15	CST8 (ENSBTAG00000032694) #16	ENSBTAG00000015949	ENSBTAG00000032687	CST3 (ENSBTAG00000000598) #18	SYNDIG1 (ENSBTAG00000040147) #21	CST7 (ENSBTAG00000004273) #22	APMAP (ENSBTAG00000004278) #23	ACSS1 (ENSBTAG00000004281) #24	VSX1 (ENSBTAG00000003335) #25	ENTPD6 (ENSBTAG00000009881) #26	PYGB (ENSBTAG00000004625) #27	ABHD12 (ENSBTAG00000001420) #28	ANKRD16 (ENSBTAG00000039071)	ENSBTAG00000035572	GDI2 (ENSBTAG00000005316)	TASOR2 (ENSBTAG00000019197)	ASB13 (ENSBTAG00000018805)	CALML5 (ENSBTAG00000013854)	NET1 (ENSBTAG00000007648)	TUBAL3 (ENSBTAG00000017740)	UCN3 (ENSBTAG00000035696)
American bison	MODERN SPECIES	2997	PAX1 (ENSBBBG00000022763)	FOXA2 (ENSBBBG00000022700)	THBD (ENSBBBG00000022684) #8	CD93 (ENSBBBG00000005967) #9	GZF1 (ENSBBBG00000022655) #11	NAPB (ENSBBBG00000022632) #12	CSTL1 (ENSBBBG00000022543) #13	ENSBBBG00000022535 #14	ENSBBBG00000022528 ##15	ENSBBBG00000005942	CST8 (ENSBBBG00000022516) #16	ENSBBBG00000022506	ENSBBBG00000022502	CST3 (ENSBBBG00000005938) #18	SYNDIG1 (ENSBBBG00000022490) #21	ENSBBBG00000022484 #22	APMAP (ENSBBBG00000005932) #23	ACSS1 (ENSBBBG00000022438) #24	ENSBBBG00000022411	VSX1 (ENSBBBG00000022405) #25	ENTPD6 (ENSBBBG00000022389) #26	PYGB (ENSBBBG00000022349) #27	ABHD12 (ENSBBBG00000022329) #28	ANKRD16 (ENSBBBG00000022315)	ENSBBBG00000022296	ENSBBBG00000022269	ENSBBBG00000022254	TASOR2 (ENSBBBG00000022161)	ASB13 (ENSBBBG00000022092)	ENSBBBG00000022078	CALML5 (ENSBBBG00000022070)
Caprinae	ANCESTRAL SPECIES	23	ENSGT00940000156996 #9	ENSGT00950000183014.f.a.h.u.a.a.b.a	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877.i	ENSGT00940000161877.j	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a	ENSGT00950000182994.B.a.b.e.a.b.a	ENSGT00530000063735.b	ENSGT00940000160326	ENSGT00940000163406	ENSGT00940000155849	ENSGT00940000162594	ENSGT00940000160568.m	ENSGT00940000153677.s.a.b.b
Goat	MODERN SPECIES	4	ENSCHIG00000022438	THBD (ENSCHIG00000010975) #8	CD93 (ENSCHIG00000009092) #9	ENSCHIG00000021979	GZF1 (ENSCHIG00000008882) #11	NAPB (ENSCHIG00000020249) #12	ENSCHIG00000021813 #14	ENSCHIG00000003642 ##15	ENSCHIG00000017766	ENSCHIG00000025947 #16	ENSCHIG00000021829	ENSCHIG00000009930	ENSCHIG00000022173	CST3 (ENSCHIG00000009090) #18	SYNDIG1 (ENSCHIG00000020378) #21	CST7 (ENSCHIG00000021898) #22	APMAP (ENSCHIG00000013115) #23	ACSS1 (ENSCHIG00000021744) #24	VSX1 (ENSCHIG00000022900) #25	ENTPD6 (ENSCHIG00000013273) #26	PYGB (ENSCHIG00000025986) #27	ABHD12 (ENSCHIG00000021501) #28	ANKRD16 (ENSCHIG00000013205)	ENSCHIG00000026283	TASOR2 (ENSCHIG00000014086)	ASB13 (ENSCHIG00000022650)	CALML5 (ENSCHIG00000009932)	NET1 (ENSCHIG00000004441)	TUBAL3 (ENSCHIG00000019472)	UCN3 (ENSCHIG00000007165)	ENSCHIG00000017096
Rambouillet Sheep	MODERN SPECIES	182																ENSOARG00020018916 #22
Camelidae	ANCESTRAL SPECIES	49	ENSGT00940000155999	ENSGT00940000166261	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000165454	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Arabian camel	MODERN SPECIES	10	CD93 (ENSCDRG00005019688) #9	ENSCDRG00005019685	GZF1 (ENSCDRG00005019674) #11	ENSCDRG00005019640 #12	CSTL1 (ENSCDRG00005019624) #13	ENSCDRG00005019617 #14	ENSCDRG00005019599 ##15	ENSCDRG00005019579	CST8 (ENSCDRG00005019565) #16	ENSCDRG00005019553	ENSCDRG00005019539	ENSCDRG00005019533	ENSCDRG00005019523	CST3 (ENSCDRG00005019511) #18	SYNDIG1 (ENSCDRG00005019502) #21	CST7 (ENSCDRG00005019480) #22	APMAP (ENSCDRG00005019456) #23	ACSS1 (ENSCDRG00005019447) #24	VSX1 (ENSCDRG00005019387) #25	ENTPD6 (ENSCDRG00005019115) #26	PYGB (ENSCDRG00005019048) #27	ABHD12 (ENSCDRG00005018892) #28	GINS1 (ENSCDRG00005018861) #30	NINL (ENSCDRG00005018825) #31	ENSCDRG00005018801 #32	ENSCDRG00005018772	ENSCDRG00005018747
Atlantogenata	ANCESTRAL SPECIES	6	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041.l	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.B ##15	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28
Afrotheria	ANCESTRAL SPECIES	3	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041.l	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00660000095541.a.a #31
Afrotheria_a	ANCESTRAL SPECIES	3	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041.l	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212 #13	ENSGT00910000144356 #14	ENSGT00940000162636.A #15	ENSGT00940000162294 #16	ENSGT00940000163249	ENSGT00940000161877	ENSGT00940000154755 #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00660000095541.a.a #31
Elephant	MODERN SPECIES	180	FOXA2 (ENSLAFG00000026345)	ENSLAFG00000032254 #7	THBD (ENSLAFG00000012832) #8	CD93 (ENSLAFG00000027545) #9	NXT1 (ENSLAFG00000029098)	GZF1 (ENSLAFG00000002458) #11	NAPB (ENSLAFG00000002461) #12	CSTL1 (ENSLAFG00000008243) #13	ENSLAFG00000008240 #14	ENSLAFG00000030756 #15	CST8 (ENSLAFG00000002803) #16	ENSLAFG00000006741	ENSLAFG00000002805	CST3 (ENSLAFG00000015020) #18	SYNDIG1 (ENSLAFG00000013030) #21	CST7 (ENSLAFG00000022218) #22	APMAP (ENSLAFG00000011820) #23	ACSS1 (ENSLAFG00000011493) #24	VSX1 (ENSLAFG00000018392) #25	ENTPD6 (ENSLAFG00000015560) #26	PYGB (ENSLAFG00000029096) #27	ABHD12 (ENSLAFG00000002307) #28	ENSLAFG00000012710 #31	ENSLAFG00000028792	NANP (ENSLAFG00000015738) #32
Hyrax	MODERN SPECIES	7468																ENSPCAG00000009307 #22
Tenrec	MODERN SPECIES	7733																ENSETEG00000015665 #22	APMAP (ENSETEG00000015666) #23	ACSS1 (ENSETEG00000015668) #24
Xenarthra	ANCESTRAL SPECIES	693																ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28
Armadillo	MODERN SPECIES	3290															ENSDNOG00000036314	CST7 (ENSDNOG00000031167) #22	ENSDNOG00000011129 #23	ACSS1 (ENSDNOG00000011785) #24	VSX1 (ENSDNOG00000002981) #25	ENTPD6 (ENSDNOG00000038546) #26	ENSDNOG00000038028	PYGB (ENSDNOG00000006034) #27	ABHD12 (ENSDNOG00000006066) #28
Marsupialia	ANCESTRAL SPECIES	19	ENSGT00950000183139.A	ENSGT00390000010121	ENSGT00670000098098	ENSGT00940000162247	ENSGT00940000159727	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00940000163249	ENSGT00940000154755.b #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183132.B	ENSGT00940000161907	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a	ENSGT00940000156844.b
Opossum	MODERN SPECIES		ENSMODG00000040034	XRN2 (ENSMODG00000006163)	NKX2-4 (ENSMODG00000006170)	NKX2-2 (ENSMODG00000006177)	PAX1 (ENSMODG00000006198)	FOXA2 (ENSMODG00000006213)	SSTR4 (ENSMODG00000023138) #7	ENSMODG00000023139 #8	CD93 (ENSMODG00000006221) #9	ENSMODG00000044175 #11	GZF1 (ENSMODG00000006238) #11	NAPB (ENSMODG00000006277) #12	ENSMODG00000048042 #18	SYNDIG1 (ENSMODG00000006293) #21	ENSMODG00000044809	ENSMODG00000006300 #22	APMAP (ENSMODG00000006313) #23	ACSS1 (ENSMODG00000006345) #24	VSX1 (ENSMODG00000006351) #25	ENTPD6 (ENSMODG00000006375) #26	PYGB (ENSMODG00000006424) #27	ABHD12 (ENSMODG00000006439) #28	ENSMODG00000006443 #30	ENSMODG00000006490 #31	NANP (ENSMODG00000006495) #32	POLR1B (ENSMODG00000006573)	TTL (ENSMODG00000006593)	ENSMODG00000006599	ZC3H6 (ENSMODG00000006612)	ENSMODG00000023144	FBLN7 (ENSMODG00000006624)
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00950000183139.A	ENSGT00390000010121	ENSGT00670000098098	ENSGT00940000162247	ENSGT00940000159727	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00940000163249	ENSGT00940000154755.b #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183132.B	ENSGT00940000161907	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a	ENSGT00940000156844.b
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00950000183139.A	ENSGT00390000010121	ENSGT00670000098098	ENSGT00940000162247	ENSGT00940000159727	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00940000163249	ENSGT00940000154755.b #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183132.B	ENSGT00940000161907	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a	ENSGT00940000156844.b
Wallaby	MODERN SPECIES	158																ENSMEUG00000011940 #22
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00950000183139.A	ENSGT00390000010121	ENSGT00670000098098	ENSGT00940000162247	ENSGT00940000159727	ENSGT00940000159137	ENSGT00940000155999	ENSGT00940000156819.a.a #7	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00940000163249	ENSGT00940000154755.b #18	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00950000183132.B	ENSGT00940000161907	ENSGT01030000234543.E	ENSGT00940000157396	ENSGT00830000128368.a	ENSGT00940000156844.b
koala	MODERN SPECIES	1	NKX2-2 (ENSPCIG00000034162)	PAX1 (ENSPCIG00000031385)	FOXA2 (ENSPCIG00000025918)	SSTR4 (ENSPCIG00000015498) #7	ENSPCIG00000015494	CD93 (ENSPCIG00000015492) #9	ENSPCIG00000013801	ENSPCIG00000013803 #11	ENSPCIG00000031294 #11	NAPB (ENSPCIG00000013805) #12	ENSPCIG00000013809	ENSPCIG00000013810	ENSPCIG00000036306 #18	ENSPCIG00000008654	SYNDIG1 (ENSPCIG00000008651) #21	CST7 (ENSPCIG00000035164) #22	APMAP (ENSPCIG00000025164) #23	ACSS1 (ENSPCIG00000025166) #24	VSX1 (ENSPCIG00000025170) #25	ENSPCIG00000025179 #26	ENSPCIG00000033046 #26	PYGB (ENSPCIG00000025185) #27	ABHD12 (ENSPCIG00000025187) #28	GINS1 (ENSPCIG00000029725) #30	ENSPCIG00000029727 #31	NANP (ENSPCIG00000029737) #32	POLR1B (ENSPCIG00000029738)	TTL (ENSPCIG00000029739)	ENSPCIG00000029740	ZC3H6 (ENSPCIG00000029741)	FBLN7 (ENSPCIG00000007356)
Common wonbat	MODERN SPECIES	643									ENSVURG00010016294 #11	ENSVURG00010016283 #11	ENSVURG00010016278 #11	NAPB (ENSVURG00010016267) #12	ENSVURG00010016209	ENSVURG00010016205 #18	SYNDIG1 (ENSVURG00010016200) #21	ENSVURG00010016191 #22	APMAP (ENSVURG00010016178) #23	ACSS1 (ENSVURG00010016164) #24	VSX1 (ENSVURG00010016151) #25	ENTPD6 (ENSVURG00010016131) #26	PYGB (ENSVURG00010016120) #27	ENSVURG00010016106	ABHD12 (ENSVURG00010016096) #28	GINS1 (ENSVURG00010016088) #30	ENSVURG00010016050 #31	NANP (ENSVURG00010016036) #32	POLR1B (ENSVURG00010015997)	TTL (ENSVURG00010015989)	ZC3H6 (ENSVURG00010015983)	FBLN7 (ENSVURG00010015970)	TMEM87B (ENSVURG00010015937)
Tasmanian devil	MODERN SPECIES	1	RALGAPA2 (ENSSHAG00000011234)	KIZ (ENSSHAG00000027601)	XRN2 (ENSSHAG00000023603)	NKX2-4 (ENSSHAG00000024664)	NKX2-2 (ENSSHAG00000004915)	PAX1 (ENSSHAG00000017556)	FOXA2 (ENSSHAG00000014905)	SSTR4 (ENSSHAG00000012685) #7	THBD (ENSSHAG00000028423) #8	CD93 (ENSSHAG00000031195) #9	ENSSHAG00000009367 #11	NAPB (ENSSHAG00000022875) #12	ENSSHAG00000031598 #18	ENSSHAG00000032132 #18	SYNDIG1 (ENSSHAG00000026100) #21	ENSSHAG00000000722 #22	APMAP (ENSSHAG00000002616) #23	ACSS1 (ENSSHAG00000004290) #24	ENSSHAG00000031963	VSX1 (ENSSHAG00000027598) #25	ENTPD6 (ENSSHAG00000017761) #26	PYGB (ENSSHAG00000017620) #27	ABHD12 (ENSSHAG00000017466) #28	GINS1 (ENSSHAG00000017422) #30	ENSSHAG00000017247 #31	ENSSHAG00000029018 #32	ENSSHAG00000028288	ENSSHAG00000020736	ZC3H6 (ENSSHAG00000016634)	FBLN7 (ENSSHAG00000015919)	TMEM87B (ENSSHAG00000015710)
Platypus	MODERN SPECIES		ENSOANG00000002851	XRN2 (ENSOANG00000015673)	NKX2-4 (ENSOANG00000048651)	ENSOANG00000047729	PAX1 (ENSOANG00000002008)	FOXA2 (ENSOANG00000015108)	SSTR4 (ENSOANG00000037977) #7	ENSOANG00000015171	ENSOANG00000041257 #9	ENSOANG00000022376 #11	GZF1 (ENSOANG00000038746) #11	ENSOANG00000045902	NAPB (ENSOANG00000000251) #12	ENSOANG00000051113 #18	SYNDIG1 (ENSOANG00000010870) #21	CST7 (ENSOANG00000042962) #22	ENSOANG00000007840	OSR1 (ENSOANG00000045764)	NT5C1B (ENSOANG00000007019)	RDH14 (ENSOANG00000049985)	KCNS3 (ENSOANG00000014360)	ENSOANG00000002187	ENSOANG00000039008	ENSOANG00000010714	VSNL1 (ENSOANG00000040965)	CYRIA (ENSOANG00000050664)	MYCN (ENSOANG00000042652)	DDX1 (ENSOANG00000005450)	NBAS (ENSOANG00000004483)	LRATD1 (ENSOANG00000007163)	TRIB2 (ENSOANG00000001757)