Murinae	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212	ENSGT00910000144356	ENSGT00940000162636.B	ENSGT00940000162636.A	ENSGT00940000162294	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a	ENSGT00940000154755.c.b.a	ENSGT00860000135980	ENSGT00950000183147.B	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #29	ENSGT00660000095541.a.a #30	ENSGT00390000003094 #31	ENSGT00940000160886.o.a #20	ENSGT00520000055567.a.a.a #32	ENSGT00940000153311.a.b.a #33	ENSGT00940000161179 #34	ENSGT00520000055634.b #35	ENSGT00940000161638 #36
Rat	MODERN SPECIES	13	AABR07027267.1 (ENSRNOG00000060618) #7	ENSRNOG00000070080 #8	LOC100911984 (ENSRNOG00000064299) #9	LOC100362296 (ENSRNOG00000065228) #10	LOC102555578 (ENSRNOG00000065847) #11	LOC102555217 (ENSRNOG00000065630) #12	Rnaset2-ps1 (ENSRNOG00000005920) #13	LOC102555033 (ENSRNOG00000067040) #14	LOC102554315 (ENSRNOG00000067071) #15	AABR07054262.1 (ENSRNOG00000056526) #16	LOC102549291 (ENSRNOG00000069811) #17	ENSRNOG00000070867 #18	ENSRNOG00000064151 #19	LOC103690174 (ENSRNOG00000068068) #20	RGD1565143 (ENSRNOG00000055769) #21	Cst7 (ENSRNOG00000006767) #22	Apmap (ENSRNOG00000006795) #23	Acss1 (ENSRNOG00000007102) #24	Vsx1 (ENSRNOG00000042220) #25	Entpd6 (ENSRNOG00000007427) #26	Pygb (ENSRNOG00000007583) #27	Abhd12 (ENSRNOG00000036934) #28	Gins1 (ENSRNOG00000008091) #29	Ninl (ENSRNOG00000027747) #30	Nanp (ENSRNOG00000008307) #31	Nsfl1c (ENSRNOG00000008604) #32	Fkbp1a (ENSRNOG00000008822) #33	Sdcbp2 (ENSRNOG00000009528) #34	Snph (ENSRNOG00000009588) #35	Rad21l1 (ENSRNOG00000022335) #36	Tmem74b (ENSRNOG00000064442) #37
Mus	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212	ENSGT00910000144356	ENSGT00940000162636.B	ENSGT00940000162636.A	ENSGT00940000162294	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a	ENSGT00940000154755.c.b.a	ENSGT00860000135980	ENSGT00950000183147.B	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #29	ENSGT00660000095541.a.a #30	ENSGT00390000003094 #31	ENSGT00940000160886.o.a #20	ENSGT00520000055567.a.a.a #32	ENSGT00940000153311.a.b.a #33	ENSGT00940000161179 #34	ENSGT00520000055634.b #35	ENSGT00940000161638 #36
Mus_A	ANCESTRAL SPECIES		ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212	ENSGT00910000144356	ENSGT00940000162636.B	ENSGT00940000162636.A	ENSGT00940000162294	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a	ENSGT00940000154755.c.b.a	ENSGT00860000135980	ENSGT00950000183147.B	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #29	ENSGT00660000095541.a.a #30	ENSGT00390000003094 #31	ENSGT00520000055567.a.a.a #32	ENSGT00940000153311.a.b.a #33	ENSGT00940000161179 #34	ENSGT00520000055634.b #35	ENSGT00940000161638 #36	ENSGT00490000044517
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000005826.a.b	ENSGT00900000141212	ENSGT00910000144356	ENSGT00940000162636.B	ENSGT00940000162636.A	ENSGT00940000162294	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a	ENSGT00940000172008	ENSGT00940000154755.c.b.a	ENSGT00860000135980	ENSGT00950000183147.B	ENSGT00940000153805.q.b.a.a.a.b.a ##12	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #29	ENSGT00660000095541.a.a #30	ENSGT00390000003094 #31	ENSGT00520000055567.a.a.a #32	ENSGT00940000153311.a.b.a #33	ENSGT00940000161179 #34	ENSGT00520000055634.b #35	ENSGT00940000161638 #36	ENSGT00490000044517
Mouse	MODERN SPECIES	11	Cst13 (ENSMUSG00000036924)	Cst9 (ENSMUSG00000027445)	Cstdc2 (ENSMUSG00000027446)	Cst3 (ENSMUSG00000027447)	Gm1330 (ENSMUSG00000063507)	Cst10 (ENSMUSG00000033156)	Syndig1 (ENSMUSG00000074736)	Zfp120 (ENSMUSG00000068134) ##12	Gm14139 (ENSMUSG00000079009) ##12	Zfp937 (ENSMUSG00000060336) ##12	Gm14124 (ENSMUSG00000079008) ##12	3300002I08Rik (ENSMUSG00000063364) #17	Gm10130 (ENSMUSG00000095315) ##12	Zfp442 (ENSMUSG00000068130) ##12	Zfp345 (ENSMUSG00000074731) ##12	Cst7 (ENSMUSG00000068129) #22	Apmap (ENSMUSG00000033096) #23	Acss1 (ENSMUSG00000027452) #24	Vsx1 (ENSMUSG00000033080) #25	Entpd6 (ENSMUSG00000033068) #26	Pygb (ENSMUSG00000033059) #27	Abhd12 (ENSMUSG00000032046) #28	Gins1 (ENSMUSG00000027454) #29	Ninl (ENSMUSG00000068115) #30	Nanp (ENSMUSG00000053916) #31	Gm14151 (ENSMUSG00000079006) #20	Gm14147 (ENSMUSG00000079005) #20	4921509C19Rik (ENSMUSG00000061525) #20	Nsfl1c (ENSMUSG00000027455) #32	Fkbp1a (ENSMUSG00000032966) #33	Sdcbp2 (ENSMUSG00000027456) #34
Mus_C	ANCESTRAL SPECIES		ENSGT00390000005826.a.b	ENSGT00900000141212	ENSGT00910000144356	ENSGT00940000162636.B	ENSGT00940000162636.A	ENSGT00940000162294	ENSGT00940000163249	ENSGT00940000161877.c.b	ENSGT00940000161877.c.a	ENSGT00940000154755.c.a	ENSGT00940000172008	ENSGT00940000154755.c.b.a	ENSGT00860000135980	ENSGT00950000183147.B	ENSGT00940000153805.q.b.a.a.a.b.a ##12	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00390000013968 #29	ENSGT00660000095541.a.a #30	ENSGT00390000003094 #31	ENSGT00520000055567.a.a.a #32	ENSGT00940000153311.a.b.a #33	ENSGT00940000161179 #34	ENSGT00520000055634.b #35	ENSGT00940000161638 #36	ENSGT00490000044517
spretus	MODERN SPECIES	11	Napb (MGP_SPRETEiJ_G0025328)	Cstl1 (MGP_SPRETEiJ_G0025329)	Cst11 (MGP_SPRETEiJ_G0025330)	Cstdc1 (MGP_SPRETEiJ_G0025331)	Cst12 (MGP_SPRETEiJ_G0025332)	Cst8 (MGP_SPRETEiJ_G0025333)	Cst13 (MGP_SPRETEiJ_G0025334)	Cst9 (MGP_SPRETEiJ_G0025335)	Cstdc2 (MGP_SPRETEiJ_G0025336)	Cst3 (MGP_SPRETEiJ_G0025337)	MGP_SPRETEiJ_G0025338	Cst10 (MGP_SPRETEiJ_G0025339)	Syndig1 (MGP_SPRETEiJ_G0025340)	MGP_SPRETEiJ_G0025341	Zfp120 (MGP_SPRETEiJ_G0025342) ##12	Cst7 (MGP_SPRETEiJ_G0025343) #22	Apmap (MGP_SPRETEiJ_G0025344) #23	Acss1 (MGP_SPRETEiJ_G0025345) #24	Vsx1 (MGP_SPRETEiJ_G0025346) #25	Entpd6 (MGP_SPRETEiJ_G0025347) #26	Pygb (MGP_SPRETEiJ_G0025348) #27	Abhd12 (MGP_SPRETEiJ_G0025349) #28	Gins1 (MGP_SPRETEiJ_G0025350) #29	Ninl (MGP_SPRETEiJ_G0025351) #30	MGP_SPRETEiJ_G0025352 #31	MGP_SPRETEiJ_G0025353 #31	Nsfl1c (MGP_SPRETEiJ_G0025355) #32	MGP_SPRETEiJ_G0025356 #33	Sdcbp2 (MGP_SPRETEiJ_G0025357) #34	Snph (MGP_SPRETEiJ_G0025358) #35	Rad21l (MGP_SPRETEiJ_G0025359) #36
Steppe mouse	MODERN SPECIES	123																ENSMSIG00000000728 #22	Apmap (ENSMSIG00000000755) #23	Acss1 (ENSMSIG00000000805) #24	Vsx1 (ENSMSIG00000000862) #25	Entpd6 (ENSMSIG00000000878) #26	Pygb (ENSMSIG00000000916) #27	Abhd12 (ENSMSIG00000001029) #28	Gins1 (ENSMSIG00000001076) #29	Ninl (ENSMSIG00000001119) #30	Nanp (ENSMSIG00000001191) #31
Ryukyu mouse	MODERN SPECIES	11	Nxt1 (MGP_CAROLIEiJ_G0024408)	Gzf1 (MGP_CAROLIEiJ_G0024409)	Napb (MGP_CAROLIEiJ_G0024410)	Cstl1 (MGP_CAROLIEiJ_G0024411)	Cst11 (MGP_CAROLIEiJ_G0024412)	Cstdc1 (MGP_CAROLIEiJ_G0024413)	Cst12 (MGP_CAROLIEiJ_G0024414)	Cst8 (MGP_CAROLIEiJ_G0024415)	Cst13 (MGP_CAROLIEiJ_G0024416)	Cst9 (MGP_CAROLIEiJ_G0024417)	Cstdc2 (MGP_CAROLIEiJ_G0024418)	Cst3 (MGP_CAROLIEiJ_G0024419)	Cst10 (MGP_CAROLIEiJ_G0024420)	Syndig1 (MGP_CAROLIEiJ_G0024421)	MGP_CAROLIEiJ_G0024422	Cst7 (MGP_CAROLIEiJ_G0024423) #22	Apmap (MGP_CAROLIEiJ_G0024424) #23	Acss1 (MGP_CAROLIEiJ_G0024425) #24	Vsx1 (MGP_CAROLIEiJ_G0024426) #25	Entpd6 (MGP_CAROLIEiJ_G0024427) #26	Pygb (MGP_CAROLIEiJ_G0024428) #27	Abhd12 (MGP_CAROLIEiJ_G0024429) #28	MGP_CAROLIEiJ_G0024430 #29	Ninl (MGP_CAROLIEiJ_G0024431) #30	MGP_CAROLIEiJ_G0024432 #31	MGP_CAROLIEiJ_G0024433 #31	Nsfl1c (MGP_CAROLIEiJ_G0024434) #32	MGP_CAROLIEiJ_G0024435 #33	Sdcbp2 (MGP_CAROLIEiJ_G0024436) #34	Snph (MGP_CAROLIEiJ_G0024437) #35	Rad21l (MGP_CAROLIEiJ_G0024438) #36
Shrew mouse	MODERN SPECIES	16	Nxt1 (MGP_PahariEiJ_G0025851)	Gzf1 (MGP_PahariEiJ_G0025852)	Napb (MGP_PahariEiJ_G0025853)	Cstl1 (MGP_PahariEiJ_G0025854)	Cst11 (MGP_PahariEiJ_G0025855)	Cstdc1 (MGP_PahariEiJ_G0025856)	Cst12 (MGP_PahariEiJ_G0025857)	Cst8 (MGP_PahariEiJ_G0025858)	Cst13 (MGP_PahariEiJ_G0025859)	Cstdc2 (MGP_PahariEiJ_G0025860)	Cst3 (MGP_PahariEiJ_G0025861)	Cst10 (MGP_PahariEiJ_G0025862)	Syndig1 (MGP_PahariEiJ_G0025863)	MGP_PahariEiJ_G0025864	MGP_PahariEiJ_G0025865 #21	Cst7 (MGP_PahariEiJ_G0025866) #22	Apmap (MGP_PahariEiJ_G0025867) #23	Acss1 (MGP_PahariEiJ_G0025868) #24	Vsx1 (MGP_PahariEiJ_G0025869) #25	Entpd6 (MGP_PahariEiJ_G0025870) #26	Pygb (MGP_PahariEiJ_G0025871) #27	Abhd12 (MGP_PahariEiJ_G0025872) #28	Gins1 (MGP_PahariEiJ_G0025873) #29	Ninl (MGP_PahariEiJ_G0025874) #30	MGP_PahariEiJ_G0025875 #31	MGP_PahariEiJ_G0025876 #31	Nsfl1c (MGP_PahariEiJ_G0025877) #32	MGP_PahariEiJ_G0025878 #33	Sdcbp2 (MGP_PahariEiJ_G0025879) #34	Snph (MGP_PahariEiJ_G0025880) #35	Rad21l (MGP_PahariEiJ_G0025881) #36