Gnathostomata ANCESTRAL SPECIES 84 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263540.A.a #26 ENSGT00940000167655 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00940000167342 ENSGT00390000006712 ENSGT00940000156883 Euteleostomi ANCESTRAL SPECIES 36 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00940000167342 ENSGT00910000144115.b Sarcopterygii ANCESTRAL SPECIES 84 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00940000167342 ENSGT00910000144115.b Tetrapoda ANCESTRAL SPECIES 49 ENSGT00860000134050 ENSGT00940000163377.b ENSGT00390000006916.c ENSGT00390000014861 ENSGT00390000009679 ENSGT00390000000549 ENSGT00520000059926 ENSGT00390000001146 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.d ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00940000167342 ENSGT00910000144115.b Amniota ANCESTRAL SPECIES 12 ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000014861 ENSGT00390000009679 ENSGT00390000000549 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000162003 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00940000167342 ENSGT00910000144115.b ENSGT00390000006712 Mammalia ANCESTRAL SPECIES 22 ENSGT00940000162552 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000166261 ENSGT00940000156996 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183132.B ENSGT00940000164409 ENSGT00940000174607 ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 Theria ANCESTRAL SPECIES 13 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00940000163249 #13 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183132.B ENSGT00940000164409 ENSGT00940000174607 ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 Eutheria ANCESTRAL SPECIES 11 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Boreoeutheria ANCESTRAL SPECIES 17 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00940000154755.d ##17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Glires ANCESTRAL SPECIES 17 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Rodentia ANCESTRAL SPECIES 18 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000164098 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Rodentia_B ANCESTRAL SPECIES 13 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.a #18 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Myomorpha ANCESTRAL SPECIES 9 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.a #18 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 ENSGT00490000044517 Muroidea ANCESTRAL SPECIES 7 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.a #18 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 ENSGT00490000044517 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.b.a #17 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000160886.o.a #33 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 Cricetidae ANCESTRAL SPECIES 5 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.b.a #17 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000160886.o.a #33 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000160886.o.a #33 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 Chinese hamster chok1gshd MODERN SPECIES 188 Napb (ENSCGRG00001015884) #7 Cstl1 (ENSCGRG00001006313) #8 Cst11 (ENSCGRG00001004859) #9 Cstdc1 (ENSCGRG00001024407) #10 Cst12 (ENSCGRG00001024036) #11 Cst8 (ENSCGRG00001020750) #12 Cst13 (ENSCGRG00001024079) #13 ENSCGRG00001017812 #14 ENSCGRG00001014456 #15 ENSCGRG00001020338 #16 ENSCGRG00001017333 #17 Cst10 (ENSCGRG00001015577) #18 ENSCGRG00001019793 #19 Syndig1 (ENSCGRG00001019306) #20 ENSCGRG00001015934 #21 Cst7 (ENSCGRG00001014715) #22 Apmap (ENSCGRG00001000472) #23 Acss1 (ENSCGRG00001016253) #24 Vsx1 (ENSCGRG00001021064) #25 Entpd6 (ENSCGRG00001018431) #26 Pygb (ENSCGRG00001023540) #27 Abhd12 (ENSCGRG00001013771) #28 Gins1 (ENSCGRG00001011595) #29 ENSCGRG00001000897 #30 Ninl (ENSCGRG00001000443) #31 Nanp (ENSCGRG00001002985) #32 ENSCGRG00001011715 #33 Nsfl1c (ENSCGRG00001016159) #34 Fkbp1a (ENSCGRG00001006692) #35 Sdcbp2 (ENSCGRG00001000837) #36 Snph (ENSCGRG00001023538) #37 Golden Hamster MODERN SPECIES 650 Foxa2 (ENSMAUG00000016457) Sstr4 (ENSMAUG00000008430) Cd93 (ENSMAUG00000019441) Nxt1 (ENSMAUG00000004141) Gzf1 (ENSMAUG00000019656) Napb (ENSMAUG00000018004) #7 Cst12 (ENSMAUG00000010970) #11 Cst13 (ENSMAUG00000021851) #13 Cst9 (ENSMAUG00000012174) #14 Cstdc2 (ENSMAUG00000014409) ##14 Cst3 (ENSMAUG00000012476) ##17 Cst10 (ENSMAUG00000020427) #18 ENSMAUG00000013001 #19 Syndig1 (ENSMAUG00000012485) #20 1810024B03Rik (ENSMAUG00000019265) Cst7 (ENSMAUG00000006797) #22 Apmap (ENSMAUG00000022255) #23 Acss1 (ENSMAUG00000016079) #24 Vsx1 (ENSMAUG00000011376) #25 Entpd6 (ENSMAUG00000001297) #26 Pygb (ENSMAUG00000017595) #27 Abhd12 (ENSMAUG00000008947) #28 Gins1 (ENSMAUG00000007925) #29 Ninl (ENSMAUG00000021812) #31 Nanp (ENSMAUG00000005527) #32 ENSMAUG00000017073 #33 Nsfl1c (ENSMAUG00000010106) #34 ENSMAUG00000010062 #35 Sdcbp2 (ENSMAUG00000016605) #36 Snph (ENSMAUG00000017593) #37 ENSMAUG00000014672 Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.b.a #17 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 ENSGT00490000044517 Prairie vole MODERN SPECIES 183 Cst10 (ENSMOCG00000001615) #18 ENSMOCG00000013859 #19 Syndig1 (ENSMOCG00000000664) #20 1810024B03Rik (ENSMOCG00000000132) Cst7 (ENSMOCG00000004809) #22 Apmap (ENSMOCG00000012045) #23 Acss1 (ENSMOCG00000017761) #24 Vsx1 (ENSMOCG00000004010) #25 Entpd6 (ENSMOCG00000010755) #26 Pygb (ENSMOCG00000000113) #27 Abhd12 (ENSMOCG00000003134) #28 Gins1 (ENSMOCG00000010221) #29 ENSMOCG00000009484 #31 ENSMOCG00000001430 #32 Northern American deer mouse MODERN SPECIES 17 Nxt1 (ENSPEMG00000010397) Gzf1 (ENSPEMG00000011285) Napb (ENSPEMG00000014658) #7 Cstl1 (ENSPEMG00000015396) #8 Cst11 (ENSPEMG00000000143) #9 Cstdc1 (ENSPEMG00000018705) #10 Cst12 (ENSPEMG00000000557) #11 Cst8 (ENSPEMG00000030932) #12 Cst13 (ENSPEMG00000005338) #13 Cst9 (ENSPEMG00000020106) #14 Cst3 (ENSPEMG00000019347) ##17 ENSPEMG00000028985 #17 ENSPEMG00000025257 Cst10 (ENSPEMG00000018501) #18 Syndig1 (ENSPEMG00000002878) #20 Cst7 (ENSPEMG00000001829) #22 Apmap (ENSPEMG00000013192) #23 Acss1 (ENSPEMG00000014809) #24 Vsx1 (ENSPEMG00000016349) #25 Entpd6 (ENSPEMG00000011143) #26 Pygb (ENSPEMG00000016365) #27 Abhd12 (ENSPEMG00000023436) #28 Gins1 (ENSPEMG00000013343) #29 Ninl (ENSPEMG00000011872) #31 Nanp (ENSPEMG00000029409) #32 Nsfl1c (ENSPEMG00000023871) #34 Fkbp1a (ENSPEMG00000028282) #35 Sdcbp2 (ENSPEMG00000017701) #36 Snph (ENSPEMG00000023065) #37 Rad21l (ENSPEMG00000023240) Tmem74bos (ENSPEMG00000024790) Murinae ANCESTRAL SPECIES 1 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000160886.o.a #33 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 Mus ANCESTRAL SPECIES 1 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000160886.o.a #33 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 Mus_A ANCESTRAL SPECIES ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 ENSGT00490000044517 Mus_B ANCESTRAL SPECIES 1 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000172008 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000153805.q.b.a.a.a.b.a ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 ENSGT00490000044517 Mouse MODERN SPECIES 11 Cst13 (ENSMUSG00000036924) #13 Cst9 (ENSMUSG00000027445) #14 Cstdc2 (ENSMUSG00000027446) ##14 Cst3 (ENSMUSG00000027447) ##17 Gm1330 (ENSMUSG00000063507) Cst10 (ENSMUSG00000033156) #18 Syndig1 (ENSMUSG00000074736) #20 Zfp120 (ENSMUSG00000068134) Gm14139 (ENSMUSG00000079009) Zfp937 (ENSMUSG00000060336) Gm14124 (ENSMUSG00000079008) 3300002I08Rik (ENSMUSG00000063364) Gm10130 (ENSMUSG00000095315) Zfp442 (ENSMUSG00000068130) Zfp345 (ENSMUSG00000074731) Cst7 (ENSMUSG00000068129) #22 Apmap (ENSMUSG00000033096) #23 Acss1 (ENSMUSG00000027452) #24 Vsx1 (ENSMUSG00000033080) #25 Entpd6 (ENSMUSG00000033068) #26 Pygb (ENSMUSG00000033059) #27 Abhd12 (ENSMUSG00000032046) #28 Gins1 (ENSMUSG00000027454) #29 Ninl (ENSMUSG00000068115) #31 Nanp (ENSMUSG00000053916) #32 Gm14151 (ENSMUSG00000079006) #33 Gm14147 (ENSMUSG00000079005) #33 4921509C19Rik (ENSMUSG00000061525) #33 Nsfl1c (ENSMUSG00000027455) #34 Fkbp1a (ENSMUSG00000032966) #35 Sdcbp2 (ENSMUSG00000027456) #36 Mus_C ANCESTRAL SPECIES ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.b #14 ENSGT00940000161877.c.a ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000172008 ENSGT00940000154755.c.b.a #18 ENSGT00860000135980 #19 ENSGT00950000183147.B #20 ENSGT00940000153805.q.b.a.a.a.b.a ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 ENSGT00490000044517 spretus MODERN SPECIES 11 Napb (MGP_SPRETEiJ_G0025328) #7 Cstl1 (MGP_SPRETEiJ_G0025329) #8 Cst11 (MGP_SPRETEiJ_G0025330) #9 Cstdc1 (MGP_SPRETEiJ_G0025331) #10 Cst12 (MGP_SPRETEiJ_G0025332) #11 Cst8 (MGP_SPRETEiJ_G0025333) #12 Cst13 (MGP_SPRETEiJ_G0025334) #13 Cst9 (MGP_SPRETEiJ_G0025335) #14 Cstdc2 (MGP_SPRETEiJ_G0025336) ##14 Cst3 (MGP_SPRETEiJ_G0025337) ##17 MGP_SPRETEiJ_G0025338 Cst10 (MGP_SPRETEiJ_G0025339) #18 Syndig1 (MGP_SPRETEiJ_G0025340) #20 MGP_SPRETEiJ_G0025341 #19 Zfp120 (MGP_SPRETEiJ_G0025342) Cst7 (MGP_SPRETEiJ_G0025343) #22 Apmap (MGP_SPRETEiJ_G0025344) #23 Acss1 (MGP_SPRETEiJ_G0025345) #24 Vsx1 (MGP_SPRETEiJ_G0025346) #25 Entpd6 (MGP_SPRETEiJ_G0025347) #26 Pygb (MGP_SPRETEiJ_G0025348) #27 Abhd12 (MGP_SPRETEiJ_G0025349) #28 Gins1 (MGP_SPRETEiJ_G0025350) #29 Ninl (MGP_SPRETEiJ_G0025351) #31 MGP_SPRETEiJ_G0025352 #32 MGP_SPRETEiJ_G0025353 #32 Nsfl1c (MGP_SPRETEiJ_G0025355) #34 MGP_SPRETEiJ_G0025356 #35 Sdcbp2 (MGP_SPRETEiJ_G0025357) #36 Snph (MGP_SPRETEiJ_G0025358) #37 Rad21l (MGP_SPRETEiJ_G0025359) Steppe mouse MODERN SPECIES 123 ENSMSIG00000000728 #22 Apmap (ENSMSIG00000000755) #23 Acss1 (ENSMSIG00000000805) #24 Vsx1 (ENSMSIG00000000862) #25 Entpd6 (ENSMSIG00000000878) #26 Pygb (ENSMSIG00000000916) #27 Abhd12 (ENSMSIG00000001029) #28 Gins1 (ENSMSIG00000001076) #29 Ninl (ENSMSIG00000001119) #31 Nanp (ENSMSIG00000001191) #32 Ryukyu mouse MODERN SPECIES 11 Nxt1 (MGP_CAROLIEiJ_G0024408) Gzf1 (MGP_CAROLIEiJ_G0024409) Napb (MGP_CAROLIEiJ_G0024410) #7 Cstl1 (MGP_CAROLIEiJ_G0024411) #8 Cst11 (MGP_CAROLIEiJ_G0024412) #9 Cstdc1 (MGP_CAROLIEiJ_G0024413) #10 Cst12 (MGP_CAROLIEiJ_G0024414) #11 Cst8 (MGP_CAROLIEiJ_G0024415) #12 Cst13 (MGP_CAROLIEiJ_G0024416) #13 Cst9 (MGP_CAROLIEiJ_G0024417) #14 Cstdc2 (MGP_CAROLIEiJ_G0024418) ##14 Cst3 (MGP_CAROLIEiJ_G0024419) ##17 Cst10 (MGP_CAROLIEiJ_G0024420) #18 Syndig1 (MGP_CAROLIEiJ_G0024421) #20 MGP_CAROLIEiJ_G0024422 #19 Cst7 (MGP_CAROLIEiJ_G0024423) #22 Apmap (MGP_CAROLIEiJ_G0024424) #23 Acss1 (MGP_CAROLIEiJ_G0024425) #24 Vsx1 (MGP_CAROLIEiJ_G0024426) #25 Entpd6 (MGP_CAROLIEiJ_G0024427) #26 Pygb (MGP_CAROLIEiJ_G0024428) #27 Abhd12 (MGP_CAROLIEiJ_G0024429) #28 MGP_CAROLIEiJ_G0024430 #29 Ninl (MGP_CAROLIEiJ_G0024431) #31 MGP_CAROLIEiJ_G0024432 #32 MGP_CAROLIEiJ_G0024433 #32 Nsfl1c (MGP_CAROLIEiJ_G0024434) #34 MGP_CAROLIEiJ_G0024435 #35 Sdcbp2 (MGP_CAROLIEiJ_G0024436) #36 Snph (MGP_CAROLIEiJ_G0024437) #37 Rad21l (MGP_CAROLIEiJ_G0024438) Shrew mouse MODERN SPECIES 16 Nxt1 (MGP_PahariEiJ_G0025851) Gzf1 (MGP_PahariEiJ_G0025852) Napb (MGP_PahariEiJ_G0025853) #7 Cstl1 (MGP_PahariEiJ_G0025854) #8 Cst11 (MGP_PahariEiJ_G0025855) #9 Cstdc1 (MGP_PahariEiJ_G0025856) #10 Cst12 (MGP_PahariEiJ_G0025857) #11 Cst8 (MGP_PahariEiJ_G0025858) #12 Cst13 (MGP_PahariEiJ_G0025859) #13 Cstdc2 (MGP_PahariEiJ_G0025860) ##14 Cst3 (MGP_PahariEiJ_G0025861) ##17 Cst10 (MGP_PahariEiJ_G0025862) #18 Syndig1 (MGP_PahariEiJ_G0025863) #20 MGP_PahariEiJ_G0025864 #19 MGP_PahariEiJ_G0025865 Cst7 (MGP_PahariEiJ_G0025866) #22 Apmap (MGP_PahariEiJ_G0025867) #23 Acss1 (MGP_PahariEiJ_G0025868) #24 Vsx1 (MGP_PahariEiJ_G0025869) #25 Entpd6 (MGP_PahariEiJ_G0025870) #26 Pygb (MGP_PahariEiJ_G0025871) #27 Abhd12 (MGP_PahariEiJ_G0025872) #28 Gins1 (MGP_PahariEiJ_G0025873) #29 Ninl (MGP_PahariEiJ_G0025874) #31 MGP_PahariEiJ_G0025875 #32 MGP_PahariEiJ_G0025876 #32 Nsfl1c (MGP_PahariEiJ_G0025877) #34 MGP_PahariEiJ_G0025878 #35 Sdcbp2 (MGP_PahariEiJ_G0025879) #36 Snph (MGP_PahariEiJ_G0025880) #37 Rad21l (MGP_PahariEiJ_G0025881) Rat MODERN SPECIES 13 AABR07027267.1 (ENSRNOG00000060618) ENSRNOG00000070080 LOC100911984 (ENSRNOG00000064299) #33 LOC100362296 (ENSRNOG00000065228) LOC102555578 (ENSRNOG00000065847) LOC102555217 (ENSRNOG00000065630) Rnaset2-ps1 (ENSRNOG00000005920) LOC102555033 (ENSRNOG00000067040) LOC102554315 (ENSRNOG00000067071) AABR07054262.1 (ENSRNOG00000056526) LOC102549291 (ENSRNOG00000069811) ENSRNOG00000070867 ENSRNOG00000064151 LOC103690174 (ENSRNOG00000068068) #33 RGD1565143 (ENSRNOG00000055769) Cst7 (ENSRNOG00000006767) #22 Apmap (ENSRNOG00000006795) #23 Acss1 (ENSRNOG00000007102) #24 Vsx1 (ENSRNOG00000042220) #25 Entpd6 (ENSRNOG00000007427) #26 Pygb (ENSRNOG00000007583) #27 Abhd12 (ENSRNOG00000036934) #28 Gins1 (ENSRNOG00000008091) #29 Ninl (ENSRNOG00000027747) #31 Nanp (ENSRNOG00000008307) #32 Nsfl1c (ENSRNOG00000008604) #34 Fkbp1a (ENSRNOG00000008822) #35 Sdcbp2 (ENSRNOG00000009528) #36 Snph (ENSRNOG00000009588) #37 Rad21l1 (ENSRNOG00000022335) Tmem74b (ENSRNOG00000064442) Upper Galilee mountains blind mole rat MODERN SPECIES 689 Cst13 (ENSNGAG00000021135) #13 Cstdc2 (ENSNGAG00000020593) ##14 Cst3 (ENSNGAG00000017018) ##17 Cst10 (ENSNGAG00000009191) #18 Syndig1 (ENSNGAG00000006291) #20 Defb21 (ENSNGAG00000003549) Defb19 (ENSNGAG00000001384) ENSNGAG00000018092 Bpifb5 (ENSNGAG00000020339) Cst7 (ENSNGAG00000014555) #22 Lesser Egyptian jerboa MODERN SPECIES 149 Csnk2a1 (ENSJJAG00000012588) Tcf15 (ENSJJAG00000010988) Srxn1 (ENSJJAG00000009121) Scrt2 (ENSJJAG00000001388) Slc52a3 (ENSJJAG00000016352) Fam110a (ENSJJAG00000004311) Angpt4 (ENSJJAG00000005709) Rspo4 (ENSJJAG00000018321) ENSJJAG00000003196 Psmf1 (ENSJJAG00000013803) Rad21l (ENSJJAG00000018022) Snph (ENSJJAG00000009948) #37 Sdcbp2 (ENSJJAG00000022024) #36 ENSJJAG00000020158 Nsfl1c (ENSJJAG00000019288) #34 Cst7 (ENSJJAG00000015302) #22 Apmap (ENSJJAG00000012447) #23 Acss1 (ENSJJAG00000024008) #24 Vsx1 (ENSJJAG00000021822) #25 Entpd6 (ENSJJAG00000015511) #26 ENSJJAG00000010262 Pygb (ENSJJAG00000023294) #27 Abhd12 (ENSJJAG00000021468) #28 Gins1 (ENSJJAG00000016065) #29 ENSJJAG00000009691 #31 ENSJJAG00000021010 #31 ENSJJAG00000020337 #31 Nanp (ENSJJAG00000016600) #32 Syndig1 (ENSJJAG00000016150) #20 Kangaroo rat MODERN SPECIES 418 Nkx2-4 (ENSDORG00000023542) Nkx2-2 (ENSDORG00000007972) Pax1 (ENSDORG00000016051) Foxa2 (ENSDORG00000027269) Sstr4 (ENSDORG00000010486) Cd93 (ENSDORG00000028704) Nxt1 (ENSDORG00000024690) Gzf1 (ENSDORG00000011855) Napb (ENSDORG00000011856) #7 Cst12 (ENSDORG00000023744) #11 Cst8 (ENSDORG00000011859) #12 Cst13 (ENSDORG00000027228) #13 Cst3 (ENSDORG00000027673) ##17 ENSDORG00000008948 #18 Syndig1 (ENSDORG00000003111) #20 Cst7 (ENSDORG00000005298) #22 Apmap (ENSDORG00000025391) #23 Acss1 (ENSDORG00000004006) #24 Vsx1 (ENSDORG00000005490) #25 Entpd6 (ENSDORG00000007175) #26 Pygb (ENSDORG00000007176) #27 Abhd12 (ENSDORG00000007179) #28 ENSDORG00000010384 #29 Ninl (ENSDORG00000010386) #31 Nanp (ENSDORG00000029868) #32 ENSDORG00000005832 Mlh1 (ENSDORG00000005831) Epm2aip1 (ENSDORG00000027253) Trank1 (ENSDORG00000013295) Dclk3 (ENSDORG00000029566) Stac (ENSDORG00000005193) Rodentia_A ANCESTRAL SPECIES 17 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.a ##14 ENSGT00940000161877.c.b #14 ENSGT00940000164098 ENSGT00940000161877.d ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164901 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 ENSGT00490000044517 ENSGT00530000063880.a Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.d ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00960000186656.a.b ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000043445 FOXA2 (ENSHGLG00000048805) PAX1 (ENSHGLG00000015866) NKX2-2 (ENSHGLG00000048629) NKX2-4 (ENSHGLG00000008824) XRN2 (ENSHGLG00000014831) KIZ (ENSHGLG00000014057) ENSHGLG00000037468 ENSHGLG00000016477 ENSHGLG00000047697 ENSHGLG00000013572 ENSHGLG00000035992 ##17 ENSHGLG00000001178 #17 ENSHGLG00000049828 ENSHGLG00000001156 #20 CST7 (ENSHGLG00000001075) #22 APMAP (ENSHGLG00000045360) #23 ENSHGLG00000042834 #24 ENSHGLG00000034236 #24 ENSHGLG00000039362 ENTPD6 (ENSHGLG00000000193) #26 PYGB (ENSHGLG00000000176) #27 ABHD12 (ENSHGLG00000035916) #28 ENSHGLG00000035611 #29 ENSHGLG00000040387 ENSHGLG00000000136 RASGRF1 (ENSHGLG00000000128) ENSHGLG00000000119 ENSHGLG00000000106 ENSHGLG00000041324 ENSHGLG00000000301 Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.d ##14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.d #17 ENSGT00940000154755.c.b.c #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00520000055567.a.a.a #34 ENSGT00940000153311.a.b.a #35 ENSGT00940000161179 #36 ENSGT00520000055634.b #37 ENSGT00940000161638 ENSGT00530000063880.a Guinea pig MODERN SPECIES 8 THBD (ENSCPOG00000030575) CD93 (ENSCPOG00000010252) NXT1 (ENSCPOG00000008817) GZF1 (ENSCPOG00000010790) NAPB (ENSCPOG00000039063) #7 CSTL1 (ENSCPOG00000008734) #8 ENSCPOG00000003822 #9 ENSCPOG00000025993 #11 CST8 (ENSCPOG00000005550) #12 ENSCPOG00000021926 #13 ENSCPOG00000025294 ##14 ENSCPOG00000030716 ##17 ENSCPOG00000030984 #17 ENSCPOG00000026799 #17 SYNDIG1 (ENSCPOG00000004943) #20 CST7 (ENSCPOG00000008022) #22 APMAP (ENSCPOG00000008131) #23 ACSS1 (ENSCPOG00000021704) #24 VSX1 (ENSCPOG00000003951) #25 ENTPD6 (ENSCPOG00000009587) #26 PYGB (ENSCPOG00000021215) #27 ABHD12 (ENSCPOG00000004078) #28 GINS1 (ENSCPOG00000000260) #29 NINL (ENSCPOG00000005041) #31 NANP (ENSCPOG00000031912) #32 ENSCPOG00000006435 ENSCPOG00000030176 ENSCPOG00000032111 NSFL1C (ENSCPOG00000004012) #34 ENSCPOG00000032891 #35 SDCBP2 (ENSCPOG00000021957) #36 Hystricomorpha_b ANCESTRAL SPECIES 31 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.d #17 ENSGT00940000154755.c.b.c #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT01030000234638.b.a.a ENSGT00390000002121 ENSGT00940000159016 ENSGT00390000008063 ENSGT01100000263497.E.a.a ENSGT00390000006806 Degu MODERN SPECIES 114 PAX1 (ENSODEG00000012427) FOXA2 (ENSODEG00000011162) THBD (ENSODEG00000010709) CD93 (ENSODEG00000012518) NXT1 (ENSODEG00000019900) GZF1 (ENSODEG00000013020) NAPB (ENSODEG00000011065) #7 CSTL1 (ENSODEG00000010719) #8 CST11 (ENSODEG00000013274) #9 ENSODEG00000012595 #11 ENSODEG00000010448 #12 ENSODEG00000010611 #13 CST3 (ENSODEG00000012334) ##17 ENSODEG00000019797 SYNDIG1 (ENSODEG00000012369) #20 CST7 (ENSODEG00000011264) #22 APMAP (ENSODEG00000010678) #23 ACSS1 (ENSODEG00000010733) #24 VSX1 (ENSODEG00000010102) #25 ENTPD6 (ENSODEG00000010721) #26 PYGB (ENSODEG00000011290) #27 ABHD12 (ENSODEG00000013149) #28 GINS1 (ENSODEG00000011331) #29 ENSODEG00000014252 #31 ENSODEG00000012295 #32 ENSODEG00000012183 MAN2B1 (ENSODEG00000010434) WDR83OS (ENSODEG00000011674) WDR83 (ENSODEG00000010258) DHPS (ENSODEG00000010756) ENSODEG00000011490 Long-tailed chinchilla MODERN SPECIES 122 PAX1 (ENSCLAG00000016362) FOXA2 (ENSCLAG00000014548) THBD (ENSCLAG00000011994) CD93 (ENSCLAG00000012062) NXT1 (ENSCLAG00000012493) GZF1 (ENSCLAG00000014714) NAPB (ENSCLAG00000011540) #7 CSTL1 (ENSCLAG00000012446) #8 ENSCLAG00000011384 #9 ENSCLAG00000015474 #11 ENSCLAG00000015212 #12 ENSCLAG00000017066 #13 ENSCLAG00000015899 #17 ENSCLAG00000012454 #17 SYNDIG1 (ENSCLAG00000012586) #20 CST7 (ENSCLAG00000015428) #22 APMAP (ENSCLAG00000013445) #23 ACSS1 (ENSCLAG00000012190) #24 VSX1 (ENSCLAG00000015160) #25 ENSCLAG00000015639 #26 PYGB (ENSCLAG00000012954) #27 ABHD12 (ENSCLAG00000010950) #28 GINS1 (ENSCLAG00000010830) #29 NINL (ENSCLAG00000011605) #31 NANP (ENSCLAG00000014668) #32 ZNF333 (ENSCLAG00000014959) MAN2B1 (ENSCLAG00000013086) ENSCLAG00000011821 WDR83 (ENSCLAG00000012198) DHPS (ENSCLAG00000012256) FBXW9 (ENSCLAG00000012587) Sciuridae ANCESTRAL SPECIES 13 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.a ##14 ENSGT00940000161877.d ##14 ENSGT00940000161877.c.b #14 ENSGT00940000164098 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.e #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Marmotini ANCESTRAL SPECIES 5 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.a ##14 ENSGT00940000161877.d ##14 ENSGT00940000161877.c.b #14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.e #17 ENSGT00940000154755.c.b.f #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000154617.B Marmotini_b ANCESTRAL SPECIES 140 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.c.a ##14 ENSGT00940000161877.d ##14 ENSGT00940000161877.c.b #14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b.e #17 ENSGT00940000154755.c.b.f #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000154617.B Squirrel MODERN SPECIES 220 NAPB (ENSSTOG00000022350) #7 CSTL1 (ENSSTOG00000024563) #8 CST11 (ENSSTOG00000004847) #9 ENSSTOG00000021841 #10 ENSSTOG00000024532 #11 CST8 (ENSSTOG00000004122) #12 ENSSTOG00000020102 ENSSTOG00000004129 #13 ENSSTOG00000028869 ##14 ENSSTOG00000015564 #14 ENSSTOG00000026963 ##17 ENSSTOG00000023496 ENSSTOG00000001311 #17 ENSSTOG00000001243 #17 SYNDIG1 (ENSSTOG00000021952) #20 CST7 (ENSSTOG00000005896) #22 APMAP (ENSSTOG00000005903) #23 ACSS1 (ENSSTOG00000005944) #24 VSX1 (ENSSTOG00000026010) #25 ENTPD6 (ENSSTOG00000006956) #26 PYGB (ENSSTOG00000014388) #27 ABHD12 (ENSSTOG00000014396) #28 GINS1 (ENSSTOG00000014406) #29 NINL (ENSSTOG00000014411) #31 NANP (ENSSTOG00000002050) #32 Arctic ground squirrel MODERN SPECIES 114 ENSUPAG00010009850 ENSUPAG00010009855 CSTL1 (ENSUPAG00010009856) #8 CST11 (ENSUPAG00010009858) #9 ENSUPAG00010009872 #10 ENSUPAG00010009878 #11 CST8 (ENSUPAG00010009884) #12 ENSUPAG00010009895 #13 ENSUPAG00010009902 ##14 ENSUPAG00010009918 #14 ENSUPAG00010009934 ##17 ENSUPAG00010009938 #17 ENSUPAG00010009978 #17 SYNDIG1 (ENSUPAG00010009998) #20 ENSUPAG00010010012 CST7 (ENSUPAG00010010018) #22 APMAP (ENSUPAG00010010025) #23 ACSS1 (ENSUPAG00010010043) #24 ENSUPAG00010010076 VSX1 (ENSUPAG00010010081) #25 ENTPD6 (ENSUPAG00010010093) #26 PYGB (ENSUPAG00010010109) #27 ABHD12 (ENSUPAG00010010127) #28 GINS1 (ENSUPAG00010010140) #29 NINL (ENSUPAG00010010146) #31 NANP (ENSUPAG00010010172) #32 CHRNA7 (ENSUPAG00010010177) Alpin marmot MODERN SPECIES 33 CST7 (ENSMMMG00000021618) #22 APMAP (ENSMMMG00000021607) #23 ACSS1 (ENSMMMG00000021594) #24 VSX1 (ENSMMMG00000021586) #25 ENTPD6 (ENSMMMG00000021571) #26 PYGB (ENSMMMG00000021556) #27 ABHD12 (ENSMMMG00000021545) #28 GINS1 (ENSMMMG00000021538) #29 NINL (ENSMMMG00000021519) #31 ENSMMMG00000021516 NANP (ENSMMMG00000021513) #32 CHRNA7 (ENSMMMG00000021504) ENSMMMG00000021501 OTUD7A (ENSMMMG00000021494) ENSMMMG00000021489 ENSMMMG00000021473 Eurasian red squirrel MODERN SPECIES 11 NAPB (ENSSVLG00005000227) #7 CSTL1 (ENSSVLG00005000168) #8 CST11 (ENSSVLG00005000162) #9 ENSSVLG00005000139 #10 ENSSVLG00005000133 #11 CST8 (ENSSVLG00005000126) #12 ENSSVLG00005012871 #13 ENSSVLG00005012823 ##14 ENSSVLG00005012749 #14 ENSSVLG00005012678 ENSSVLG00005012635 ##17 ENSSVLG00005012618 ENSSVLG00005012569 #17 ENSSVLG00005012499 #17 SYNDIG1 (ENSSVLG00005012463) #20 CST7 (ENSSVLG00005012392) #22 APMAP (ENSSVLG00005012325) #23 ACSS1 (ENSSVLG00005012262) #24 ENSSVLG00005012189 VSX1 (ENSSVLG00005012048) #25 PYGB (ENSSVLG00005011885) #27 ABHD12 (ENSSVLG00005011759) #28 GINS1 (ENSSVLG00005011707) #29 NINL (ENSSVLG00005011654) #31 NANP (ENSSVLG00005011598) #32 ARL2BP (ENSSVLG00005011550) ENSSVLG00005011535 CTXND1 (ENSSVLG00005011512) ARNT2 (ENSSVLG00005011111) ENSSVLG00005011041 ABHD17C (ENSSVLG00005010975) Lagomorpha ANCESTRAL SPECIES 248 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Pika MODERN SPECIES 4000 ENSOPRG00000009654 #22 APMAP (ENSOPRG00000009670) #23 ACSS1 (ENSOPRG00000009689) #24 Rabbit MODERN SPECIES 474 ENSOCUG00000026879 SYNDIG1 (ENSOCUG00000025498) #20 CST7 (ENSOCUG00000025268) #22 APMAP (ENSOCUG00000027493) #23 ACSS1 (ENSOCUG00000013125) #24 ENTPD6 (ENSOCUG00000015930) #26 PYGB (ENSOCUG00000002790) #27 ENSOCUG00000030064 ABHD12 (ENSOCUG00000002798) #28 ENSOCUG00000015747 #29 NINL (ENSOCUG00000006288) #31 NANP (ENSOCUG00000002927) #32 ENSOCUG00000024869 ENSOCUG00000029482 ORYCUNV1R1534 (ENSOCUG00000030661) ENSOCUG00000039676 ENSOCUG00000039655 ORYCUNV1R1596 (ENSOCUG00000038955) Primates ANCESTRAL SPECIES 17 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Haplorrhini ANCESTRAL SPECIES 13 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Simiiformes ANCESTRAL SPECIES 18 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Catarrhini ANCESTRAL SPECIES 19 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00860000135650 ENSGT00940000163410 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Hominoidea ANCESTRAL SPECIES 17 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410.a.b.a ENSGT00860000135650 ENSGT00940000163410.a.a ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Hominidae ANCESTRAL SPECIES 18 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410.a.b.a ENSGT00860000135650 ENSGT00940000163410.a.a ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410.a.b.a ENSGT00860000135650 ENSGT00940000163410.a.a ENSGT00940000164560 ENSGT00940000154601.a.b.a.a.b ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 ENSGT00400000023200 ENSGT00390000000713.h.a.a.a ENSGT00390000001502 ENSGT00530000064565 Gorilla MODERN SPECIES 11 ENSGGOG00000040550 FOXA2 (ENSGGOG00000006368) ENSGGOG00000012539 GZF1 (ENSGGOG00000023248) NAPB (ENSGGOG00000008548) #7 CSTL1 (ENSGGOG00000013172) #8 CST8 (ENSGGOG00000006139) #12 ENSGGOG00000038343 #13 CST9L (ENSGGOG00000015132) #14 CST9 (ENSGGOG00000009518) CST1 (ENSGGOG00000002786) CST2 (ENSGGOG00000007675) CST5 (ENSGGOG00000016581) GGTLC1 (ENSGGOG00000027711) SYNDIG1 (ENSGGOG00000000617) #20 CST7 (ENSGGOG00000001275) #22 APMAP (ENSGGOG00000001278) #23 ACSS1 (ENSGGOG00000001280) #24 VSX1 (ENSGGOG00000001283) #25 ENTPD6 (ENSGGOG00000014904) #26 PYGB (ENSGGOG00000014285) #27 ABHD12 (ENSGGOG00000014299) #28 GINS1 (ENSGGOG00000002473) #29 NINL (ENSGGOG00000002477) #31 NANP (ENSGGOG00000012837) #32 ZNF337 (ENSGGOG00000014016) ENSGGOG00000016857 DEFB115 (ENSGGOG00000024671) ENSGGOG00000041871 DEFB116 (ENSGGOG00000006237) DEFB118 (ENSGGOG00000042168) Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410.a.b.a ENSGT00860000135650 ENSGT00940000163410.a.a ENSGT00940000164560 ENSGT00940000154601.a.b.a.a.b ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 ENSGT00400000023200 ENSGT00390000000713.h.a.a.a ENSGT00390000001502 ENSGT00530000064565 Pan ANCESTRAL SPECIES 15 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410.a.b.a ENSGT00860000135650 ENSGT00940000163410.a.a ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 ENSGT00400000023200 ENSGT00390000000713.h.a.a.a ENSGT00390000001502 ENSGT00530000064565 Bonobo MODERN SPECIES 11 GZF1 (ENSPPAG00000028487) NAPB (ENSPPAG00000043876) #7 CSTL1 (ENSPPAG00000038564) #8 CST11 (ENSPPAG00000025372) #9 ENSPPAG00000034245 #11 CST8 (ENSPPAG00000037606) #12 ENSPPAG00000039408 #13 ENSPPAG00000035983 CST9L (ENSPPAG00000033681) #14 CST9 (ENSPPAG00000037364) CST3 (ENSPPAG00000041092) ##17 CST4 (ENSPPAG00000035722) ENSPPAG00000038530 CST5 (ENSPPAG00000030471) SYNDIG1 (ENSPPAG00000030602) #20 CST7 (ENSPPAG00000030321) #22 APMAP (ENSPPAG00000037399) #23 ACSS1 (ENSPPAG00000027610) #24 VSX1 (ENSPPAG00000040169) #25 ENTPD6 (ENSPPAG00000031043) #26 ENSPPAG00000042700 PYGB (ENSPPAG00000034450) #27 ABHD12 (ENSPPAG00000038923) #28 GINS1 (ENSPPAG00000039045) #29 NINL (ENSPPAG00000031856) #31 NANP (ENSPPAG00000022695) #32 ZNF337 (ENSPPAG00000025161) DEFB115 (ENSPPAG00000027269) ENSPPAG00000027868 DEFB116 (ENSPPAG00000029087) DEFB118 (ENSPPAG00000029202) Chimpanzee MODERN SPECIES 11 CSTL1 (ENSPTRG00000045776) #8 CST11 (ENSPTRG00000013323) #9 ENSPTRG00000045117 #11 CST8 (ENSPTRG00000013324) #12 ENSPTRG00000050976 #13 ENSPTRG00000047084 CST9L (ENSPTRG00000013325) #14 CST9 (ENSPTRG00000013326) CST3 (ENSPTRG00000046564) ##17 CST1 (ENSPTRG00000013329) ENSPTRG00000049771 CST5 (ENSPTRG00000048582) GGTLC1 (ENSPTRG00000013331) ENSPTRG00000043654 SYNDIG1 (ENSPTRG00000013333) #20 CST7 (ENSPTRG00000013334) #22 APMAP (ENSPTRG00000013335) #23 ACSS1 (ENSPTRG00000013336) #24 VSX1 (ENSPTRG00000013337) #25 ENTPD6 (ENSPTRG00000013338) #26 PYGB (ENSPTRG00000049662) #27 ABHD12 (ENSPTRG00000013340) #28 GINS1 (ENSPTRG00000050964) #29 NINL (ENSPTRG00000013342) #31 NANP (ENSPTRG00000044350) #32 ZNF337 (ENSPTRG00000013344) ENSPTRG00000048366 ENSPTRG00000046023 ENSPTRG00000043123 ENSPTRG00000043041 ENSPTRG00000044519 Human MODERN SPECIES 12 NXT1 (ENSG00000132661) GZF1 (ENSG00000125812) NAPB (ENSG00000125814) #7 CSTL1 (ENSG00000125823) #8 CST11 (ENSG00000125831) #9 CST8 (ENSG00000125815) #12 CST9L (ENSG00000101435) #14 CST9 (ENSG00000173335) CST3 (ENSG00000101439) ##17 CST4 (ENSG00000101441) CST1 (ENSG00000170373) CST2 (ENSG00000170369) CST5 (ENSG00000170367) GGTLC1 (ENSG00000149435) SYNDIG1 (ENSG00000101463) #20 CST7 (ENSG00000077984) #22 APMAP (ENSG00000101474) #23 ACSS1 (ENSG00000154930) #24 VSX1 (ENSG00000100987) #25 ENTPD6 (ENSG00000197586) #26 PYGB (ENSG00000100994) #27 ABHD12 (ENSG00000100997) #28 GINS1 (ENSG00000101003) #29 NINL (ENSG00000101004) #31 NANP (ENSG00000170191) #32 ZNF337 (ENSG00000130684) DEFB115 (ENSG00000215547) DEFB116 (ENSG00000215545) DEFB118 (ENSG00000131068) DEFB119 (ENSG00000180483) DEFB121 (ENSG00000204548) Orangutan MODERN SPECIES 11 NAPB (ENSPPYG00000010767) #7 CSTL1 (ENSPPYG00000010768) #8 CST11 (ENSPPYG00000010769) #9 ENSPPYG00000037632 #11 CST8 (ENSPPYG00000010770) #12 ENSPPYG00000010771 #13 ENSPPYG00000010772 CST9L (ENSPPYG00000010773) #14 CST9 (ENSPPYG00000010775) CST3 (ENSPPYG00000010776) ##17 ENSPPYG00000039032 CST4 (ENSPPYG00000011266) CST2 (ENSPPYG00000010777) CST5 (ENSPPYG00000037292) SYNDIG1 (ENSPPYG00000010778) #20 CST7 (ENSPPYG00000010779) #22 APMAP (ENSPPYG00000010780) #23 ACSS1 (ENSPPYG00000010781) #24 VSX1 (ENSPPYG00000010782) #25 ENTPD6 (ENSPPYG00000010783) #26 PYGB (ENSPPYG00000010785) #27 ABHD12 (ENSPPYG00000010786) #28 GINS1 (ENSPPYG00000010787) #29 NINL (ENSPPYG00000010788) #31 NANP (ENSPPYG00000040950) #32 ZNF337 (ENSPPYG00000010790) ENSPPYG00000010791 PROKR2 (ENSPPYG00000010792) ENSPPYG00000010793 CDS2 (ENSPPYG00000010794) PCNA (ENSPPYG00000010795) Gibbon MODERN SPECIES 3 SSTR4 (ENSNLEG00000018627) THBD (ENSNLEG00000011558) CD93 (ENSNLEG00000011559) ENSNLEG00000033556 GZF1 (ENSNLEG00000011565) NAPB (ENSNLEG00000027099) #7 CSTL1 (ENSNLEG00000011597) #8 CST11 (ENSNLEG00000011603) #9 ENSNLEG00000033018 #11 CST8 (ENSNLEG00000011607) #12 CST9 (ENSNLEG00000011616) CST3 (ENSNLEG00000035405) ##17 CST2 (ENSNLEG00000036132) CST5 (ENSNLEG00000015517) SYNDIG1 (ENSNLEG00000015521) #20 CST7 (ENSNLEG00000015525) #22 APMAP (ENSNLEG00000032557) #23 ACSS1 (ENSNLEG00000015554) #24 ENSNLEG00000015558 #25 ENTPD6 (ENSNLEG00000015563) #26 PYGB (ENSNLEG00000015641) #27 ABHD12 (ENSNLEG00000015658) #28 ENSNLEG00000015674 GINS1 (ENSNLEG00000015677) #29 NINL (ENSNLEG00000015689) #31 NANP (ENSNLEG00000015706) #32 ZNF337 (ENSNLEG00000028946) ENSNLEG00000027564 ENSNLEG00000035311 PROKR2 (ENSNLEG00000007731) ENSNLEG00000018558 Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT00940000157300.d ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Rhinopithecus ANCESTRAL SPECIES 412 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT00940000157300.d ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Golden snub-nosed monkey MODERN SPECIES 595 SYNDIG1 (ENSRROG00000034113) #20 CST7 (ENSRROG00000035881) #22 APMAP (ENSRROG00000037641) #23 ACSS1 (ENSRROG00000043161) #24 VSX1 (ENSRROG00000044921) #25 ENSRROG00000044632 ENTPD6 (ENSRROG00000031262) #26 PYGB (ENSRROG00000035671) #27 ABHD12 (ENSRROG00000045624) #28 GINS1 (ENSRROG00000036067) #29 NINL (ENSRROG00000036818) #31 NANP (ENSRROG00000042030) #32 ZNF337 (ENSRROG00000037719) Black snub-nosed monkey MODERN SPECIES 2329 SYNDIG1 (ENSRBIG00000040849) #20 CST7 (ENSRBIG00000037963) #22 APMAP (ENSRBIG00000028571) #23 ACSS1 (ENSRBIG00000035582) #24 VSX1 (ENSRBIG00000032231) #25 ENSRBIG00000037585 ENTPD6 (ENSRBIG00000037558) #26 PYGB (ENSRBIG00000043048) #27 ABHD12 (ENSRBIG00000033301) #28 ENSRBIG00000037880 LRP2BP (ENSRBIG00000036810) ANKRD37 (ENSRBIG00000030265) UFSP2 (ENSRBIG00000031222) C4orf47 (ENSRBIG00000027024) CCDC110 (ENSRBIG00000032062) PDLIM3 (ENSRBIG00000027283) SORBS2 (ENSRBIG00000038356) Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877 #14 ENSGT00940000164098.a.b ENSGT00940000164098.a.a ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT00940000157300.d ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000164098.a.a ENSGT00940000163410 ENSGT00940000154755.d ##17 ENSGT00860000135650.a ENSGT00940000164098.a.b ENSGT00940000161877.h #14 ENSGT00940000166721 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT00940000157300.d ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Macaca ANCESTRAL SPECIES 16 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721 ENSGT00940000161877.g.b #14 ENSGT00940000164098.a.a ENSGT00940000163410 ENSGT00860000135650.a ENSGT00940000154755.d ##17 ENSGT00860000135650.b ENSGT00940000164098.a.b ENSGT00940000161877.g.a #14 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT00940000157300.d ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Pig-tailed macaque MODERN SPECIES 130 NXT1 (ENSMNEG00000027745) GZF1 (ENSMNEG00000033117) NAPB (ENSMNEG00000036841) #7 CSTL1 (ENSMNEG00000044944) #8 CST11 (ENSMNEG00000041474) #9 ENSMNEG00000032864 #11 CST8 (ENSMNEG00000037697) #12 CST9 (ENSMNEG00000039807) ENSMNEG00000039062 ENSMNEG00000039431 CST3 (ENSMNEG00000032382) ##17 ENSMNEG00000044989 CST9L (ENSMNEG00000032753) #14 CST5 (ENSMNEG00000039359) SYNDIG1 (ENSMNEG00000029710) #20 CST7 (ENSMNEG00000030455) #22 APMAP (ENSMNEG00000043679) #23 ACSS1 (ENSMNEG00000042557) #24 VSX1 (ENSMNEG00000013966) #25 ENSMNEG00000036046 ENTPD6 (ENSMNEG00000027824) #26 PYGB (ENSMNEG00000035548) #27 ABHD12 (ENSMNEG00000038825) #28 GINS1 (ENSMNEG00000035311) #29 NINL (ENSMNEG00000034434) #31 NANP (ENSMNEG00000038191) #32 Macaca_a ANCESTRAL SPECIES 18 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000166721.a ENSGT00940000164098.a.a ENSGT00940000163410.d ENSGT00860000135650.a ENSGT00940000154755.d ##17 ENSGT00940000163410.c ENSGT00940000164098.a.b ENSGT00940000161877.g.a #14 ENSGT00940000161877.g.b #14 ENSGT00940000166721.b ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01070000254267.b ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820.a Rhesus MODERN SPECIES 1 CSTL1 (ENSMMUG00000055975) #8 CST11 (ENSMMUG00000022393) #9 ENSMMUG00000016490 #11 CST8 (ENSMMUG00000016489) #12 ENSMMUG00000059402 #13 ENSMMUG00000063687 CST9 (ENSMMUG00000039259) ENSMMUG00000046980 CST3 (ENSMMUG00000050596) ##17 ENSMMUG00000050726 ENSMMUG00000063629 CST9L (ENSMMUG00000045312) #14 ENSMMUG00000003933 CST5 (ENSMMUG00000059092) SYNDIG1 (ENSMMUG00000015852) #20 CST7 (ENSMMUG00000005757) #22 APMAP (ENSMMUG00000061222) #23 ACSS1 (ENSMMUG00000020597) #24 VSX1 (ENSMMUG00000058095) #25 ENSMMUG00000052572 PYGB (ENSMMUG00000009199) #27 ABHD12 (ENSMMUG00000009201) #28 ENSMMUG00000059374 GINS1 (ENSMMUG00000002397) #29 NINL (ENSMMUG00000009953) #31 ENSMMUG00000065032 NANP (ENSMMUG00000020858) #32 ZNF337 (ENSMMUG00000020859) ENSMMUG00000001813 ENSMMUG00000049809 ENSMMUG00000050280 Crab-eating macaque MODERN SPECIES 1 NAPB (ENSMFAG00000012865) #7 CSTL1 (ENSMFAG00000057818) #8 CST11 (ENSMFAG00000038093) #9 ENSMFAG00000032810 #11 CST8 (ENSMFAG00000033001) #12 ENSMFAG00000061186 #13 ENSMFAG00000055858 ENSMFAG00000051852 ENSMFAG00000001311 CST3 (ENSMFAG00000062094) ##17 ENSMFAG00000032358 ENSMFAG00000002225 CST9L (ENSMFAG00000045303) #14 CST5 (ENSMFAG00000042493) SYNDIG1 (ENSMFAG00000052498) #20 CST7 (ENSMFAG00000003193) #22 APMAP (ENSMFAG00000033103) #23 ACSS1 (ENSMFAG00000003063) #24 VSX1 (ENSMFAG00000043885) #25 ENSMFAG00000048668 ENTPD6 (ENSMFAG00000000133) #26 PYGB (ENSMFAG00000033575) #27 ABHD12 (ENSMFAG00000002681) #28 GINS1 (ENSMFAG00000002736) #29 ENSMFAG00000062076 NINL (ENSMFAG00000036364) #31 NANP (ENSMFAG00000036787) #32 ENSMFAG00000031149 ENSMFAG00000047352 ENSMFAG00000001981 ENSMFAG00000058952 Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000164098.a.a ENSGT00940000163410 ENSGT00860000135650.a ENSGT00940000154755.d ##17 ENSGT00940000164098.a.b ENSGT00940000161877.h #14 ENSGT00940000166721 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT00940000157300.d ENSGT01100000263540.A.a #26 ENSGT01050000248429 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Olive baboon MODERN SPECIES 7 HDHD5 (ENSPANG00000024306) TMEM121B (ENSPANG00000015715) ENSPANG00000016404 ENSPANG00000044107 ENSPANG00000050870 ENSPANG00000049477 ENSPANG00000046906 #14 ENSPANG00000050867 #13 ENSPANG00000030853 ENSPANG00000021092 ENSPANG00000000660 ENSPANG00000023845 #14 SYNDIG1 (ENSPANG00000047245) #20 ENSPANG00000048046 APMAP (ENSPANG00000051418) #23 CST7 (ENSPANG00000042634) #22 ACSS1 (ENSPANG00000017910) #24 VSX1 (ENSPANG00000021775) #25 ENTPD6 (ENSPANG00000026175) #26 ENSPANG00000045994 PYGB (ENSPANG00000024585) #27 ABHD12 (ENSPANG00000001312) #28 GINS1 (ENSPANG00000032488) #29 NINL (ENSPANG00000016039) #31 ENSPANG00000044377 NANP (ENSPANG00000031862) #32 ENSPANG00000048820 CD93 (ENSPANG00000018432) THBD (ENSPANG00000046781) SSTR4 (ENSPANG00000004090) ENSPANG00000044373 Cercopithecinae_d ANCESTRAL SPECIES 2 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000164098.a.a ENSGT00940000154755.d ##17 ENSGT00860000135650.a ENSGT00940000163410 ENSGT00940000164098.a.b ENSGT00940000161877.h #14 ENSGT00940000166721 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT00940000157300.d ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 Drill MODERN SPECIES 1583 ENSMLEG00000035691 ENSMLEG00000037193 CST9L (ENSMLEG00000038338) #14 CST5 (ENSMLEG00000029640) SYNDIG1 (ENSMLEG00000030663) #20 CST7 (ENSMLEG00000035783) #22 APMAP (ENSMLEG00000041061) #23 ACSS1 (ENSMLEG00000029721) #24 VSX1 (ENSMLEG00000002119) #25 Sooty mangabey MODERN SPECIES 602 NAPB (ENSCATG00000042262) #7 CSTL1 (ENSCATG00000031751) #8 CST11 (ENSCATG00000042927) #9 ENSCATG00000043404 #11 CST8 (ENSCATG00000033479) #12 ENSCATG00000033110 ENSCATG00000043016 CST3 (ENSCATG00000032215) ##17 ENSCATG00000036042 ENSCATG00000035785 ENSCATG00000035179 CST9L (ENSCATG00000032932) #14 ENSCATG00000032535 CST5 (ENSCATG00000032239) SYNDIG1 (ENSCATG00000034882) #20 CST7 (ENSCATG00000043766) #22 APMAP (ENSCATG00000016408) #23 ACSS1 (ENSCATG00000038637) #24 VSX1 (ENSCATG00000037882) #25 ENSCATG00000007149 ENTPD6 (ENSCATG00000031217) #26 PYGB (ENSCATG00000039037) #27 ABHD12 (ENSCATG00000033998) #28 GINS1 (ENSCATG00000035618) #29 NINL (ENSCATG00000024895) #31 Platyrrhini ANCESTRAL SPECIES 11 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Cebidae ANCESTRAL SPECIES 13 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00390000016478.i.b ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Marmoset MODERN SPECIES 17 CD93 (ENSCJAG00000005796) NXT1 (ENSCJAG00000044836) GZF1 (ENSCJAG00000000733) NAPB (ENSCJAG00000000712) #7 CSTL1 (ENSCJAG00000041540) #8 CST11 (ENSCJAG00000080392) #9 ENSCJAG00000074097 #11 CST8 (ENSCJAG00000000697) #12 ENSCJAG00000078884 #13 CST9 (ENSCJAG00000084681) CST3 (ENSCJAG00000036809) ##17 ENSCJAG00000000676 CST5 (ENSCJAG00000037422) SYNDIG1 (ENSCJAG00000046278) #20 APMAP (ENSCJAG00000085161) #23 CST7 (ENSCJAG00000048473) #22 ACSS1 (ENSCJAG00000011837) #24 VSX1 (ENSCJAG00000069727) #25 ENSCJAG00000011698 #27 ABHD12 (ENSCJAG00000011654) #28 GINS1 (ENSCJAG00000011640) #29 NINL (ENSCJAG00000011624) #31 NANP (ENSCJAG00000048461) #32 ZNF337 (ENSCJAG00000011611) RPN2 (ENSCJAG00000021517) GHRH (ENSCJAG00000021515) ENSCJAG00000076632 SRC (ENSCJAG00000021512) BLCAP (ENSCJAG00000048212) ENSCJAG00000041804 ENSCJAG00000048098 Cebidae_a ANCESTRAL SPECIES 2 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000161877 #14 ENSGT00940000164098 ENSGT00940000154755.d ##17 ENSGT00940000163410 ENSGT00940000164560 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00390000016478.i.b ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164820 Bolivian squirrel monkey MODERN SPECIES 211 SSTR4 (ENSSBOG00000013012) CD93 (ENSSBOG00000018965) NXT1 (ENSSBOG00000036378) GZF1 (ENSSBOG00000018893) NAPB (ENSSBOG00000019980) #7 CSTL1 (ENSSBOG00000006474) #8 CST11 (ENSSBOG00000025613) #9 ENSSBOG00000025115 #11 CST8 (ENSSBOG00000021877) #12 CST9L (ENSSBOG00000020799) #14 CST9 (ENSSBOG00000020759) CST3 (ENSSBOG00000030007) ##17 ENSSBOG00000028716 CST5 (ENSSBOG00000022942) SYNDIG1 (ENSSBOG00000023812) #20 CST7 (ENSSBOG00000021587) #22 APMAP (ENSSBOG00000035251) #23 ACSS1 (ENSSBOG00000031199) #24 ENSSBOG00000025683 #25 ENTPD6 (ENSSBOG00000026749) #26 PYGB (ENSSBOG00000021161) #27 ABHD12 (ENSSBOG00000022490) #28 GINS1 (ENSSBOG00000022068) #29 ENSSBOG00000028297 NINL (ENSSBOG00000025198) #31 NANP (ENSSBOG00000028505) #32 ZNF337 (ENSSBOG00000034901) ENSSBOG00000020085 Capuchin MODERN SPECIES 134 THBD (ENSCCAG00000020711) CD93 (ENSCCAG00000034013) NXT1 (ENSCCAG00000015478) GZF1 (ENSCCAG00000035601) NAPB (ENSCCAG00000029344) #7 CSTL1 (ENSCCAG00000033212) #8 CST11 (ENSCCAG00000035766) #9 ENSCCAG00000037786 #11 CST8 (ENSCCAG00000024862) #12 CST9L (ENSCCAG00000026509) #14 CST9 (ENSCCAG00000024829) CST3 (ENSCCAG00000001843) ##17 ENSCCAG00000033223 CST5 (ENSCCAG00000034182) SYNDIG1 (ENSCCAG00000028638) #20 CST7 (ENSCCAG00000027578) #22 APMAP (ENSCCAG00000023838) #23 ACSS1 (ENSCCAG00000037466) #24 ENSCCAG00000033591 VSX1 (ENSCCAG00000015659) #25 ENTPD6 (ENSCCAG00000008076) #26 PYGB (ENSCCAG00000024374) #27 ABHD12 (ENSCCAG00000019845) #28 GINS1 (ENSCCAG00000034779) #29 NINL (ENSCCAG00000033765) #31 Mas night monkey MODERN SPECIES 1049 CST5 (ENSANAG00000019554) ENSANAG00000031339 SYNDIG1 (ENSANAG00000029055) #20 CST7 (ENSANAG00000028258) #22 APMAP (ENSANAG00000022389) #23 ACSS1 (ENSANAG00000035424) #24 ENSANAG00000026111 VSX1 (ENSANAG00000029622) #25 ENTPD6 (ENSANAG00000022470) #26 PYGB (ENSANAG00000031809) #27 ABHD12 (ENSANAG00000034290) #28 GINS1 (ENSANAG00000019506) #29 NINL (ENSANAG00000029624) #31 ENSANAG00000031273 NANP (ENSANAG00000027665) #32 ZNF337 (ENSANAG00000021202) Tarsier MODERN SPECIES 6271 CST7 (ENSTSYG00000032741) #22 APMAP (ENSTSYG00000032650) #23 ACSS1 (ENSTSYG00000005675) #24 VSX1 (ENSTSYG00000011433) #25 ENTPD6 (ENSTSYG00000009781) #26 PYGB (ENSTSYG00000033095) #27 ABHD12 (ENSTSYG00000010157) #28 GINS1 (ENSTSYG00000002220) #29 NINL (ENSTSYG00000012921) #31 Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00940000164098 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Lemuriformes ANCESTRAL SPECIES 44 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162294 #12 ENSGT00940000164098 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755.c.a ##17 ENSGT00940000154755.c.b #17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000159570 ENSGT00940000159423 ENSGT00390000000645 ENSGT00940000156391 ENSGT00940000162580 ENSGT00940000161707.b Lemuriformes_a ANCESTRAL SPECIES 115 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000159570 ENSGT00940000159423 ENSGT00390000000645 ENSGT00940000156391 ENSGT00940000162580 ENSGT00940000161707.b Coquerels sifaka MODERN SPECIES 611 ENSPCOG00000021349 SYNDIG1 (ENSPCOG00000003880) #20 ENSPCOG00000023905 CST7 (ENSPCOG00000019725) #22 APMAP (ENSPCOG00000023592) #23 ACSS1 (ENSPCOG00000018745) #24 VSX1 (ENSPCOG00000013919) #25 ENTPD6 (ENSPCOG00000022862) #26 PYGB (ENSPCOG00000021348) #27 ABHD12 (ENSPCOG00000022073) #28 GINS1 (ENSPCOG00000016034) #29 NINL (ENSPCOG00000019338) #31 ENSPCOG00000014381 NANP (ENSPCOG00000022703) #32 HTRA3 (ENSPCOG00000015549) ACOX3 (ENSPCOG00000015967) TRMT44 (ENSPCOG00000028809) CPZ (ENSPCOG00000018885) HMX1 (ENSPCOG00000019742) Greater bamboo lemur MODERN SPECIES 602 SYNDIG1 (ENSPSMG00000010370) #20 CST7 (ENSPSMG00000010357) #22 APMAP (ENSPSMG00000010339) #23 ACSS1 (ENSPSMG00000010324) #24 ENSPSMG00000010300 VSX1 (ENSPSMG00000010286) #25 ENTPD6 (ENSPSMG00000010235) #26 PYGB (ENSPSMG00000009949) #27 ABHD12 (ENSPSMG00000009630) #28 GINS1 (ENSPSMG00000009556) #29 NINL (ENSPSMG00000009545) #31 NANP (ENSPSMG00000009528) #32 Mouse lemur MODERN SPECIES 9 NKX2-2 (ENSMICG00000045009) PAX1 (ENSMICG00000016968) FOXA2 (ENSMICG00000030588) CD93 (ENSMICG00000017898) NXT1 (ENSMICG00000044853) GZF1 (ENSMICG00000046070) NAPB (ENSMICG00000017902) #7 CSTL1 (ENSMICG00000017903) #8 CST11 (ENSMICG00000017904) #9 CST8 (ENSMICG00000017905) #12 CST9 (ENSMICG00000047052) ENSMICG00000004617 ##17 ENSMICG00000043235 #17 ENSMICG00000032368 SYNDIG1 (ENSMICG00000027578) #20 CST7 (ENSMICG00000002037) #22 APMAP (ENSMICG00000002038) #23 ACSS1 (ENSMICG00000002040) #24 VSX1 (ENSMICG00000002047) #25 ENTPD6 (ENSMICG00000005764) #26 PYGB (ENSMICG00000005768) #27 ABHD12 (ENSMICG00000005779) #28 GINS1 (ENSMICG00000037715) #29 NINL (ENSMICG00000005792) #31 NANP (ENSMICG00000027386) #32 HTRA3 (ENSMICG00000030499) ACOX3 (ENSMICG00000011777) ENSMICG00000032294 CPZ (ENSMICG00000012180) HMX1 (ENSMICG00000045196) ADRA2C (ENSMICG00000036964) Bushbaby MODERN SPECIES 312 SYNDIG1 (ENSOGAG00000008495) #20 CST7 (ENSOGAG00000008497) #22 APMAP (ENSOGAG00000002478) #23 ACSS1 (ENSOGAG00000008498) #24 VSX1 (ENSOGAG00000008500) #25 ENTPD6 (ENSOGAG00000025094) #26 PYGB (ENSOGAG00000032919) #27 ABHD12 (ENSOGAG00000008501) #28 GINS1 (ENSOGAG00000006512) #29 NINL (ENSOGAG00000006517) #31 ENSOGAG00000006535 #32 ENSOGAG00000032695 ENSOGAG00000000694 ENSOGAG00000028618 ADAM2 (ENSOGAG00000002056) IDO1 (ENSOGAG00000012936) IDO2 (ENSOGAG00000012941) Laurasiatheria ANCESTRAL SPECIES 17 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Eulipotyphla ANCESTRAL SPECIES 941 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 Common shrew MODERN SPECIES 6343 ENSSARG00000010188 #22 ENSSARG00000010207 #23 Hedgehog MODERN SPECIES 8389 ENSEEUG00000001357 #22 APMAP (ENSEEUG00000001364) #23 Laurasiatheria_a ANCESTRAL SPECIES 18 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Laurasiatheria_b ANCESTRAL SPECIES 19 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Laurasiatheria_c ANCESTRAL SPECIES 17 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Chiroptera ANCESTRAL SPECIES 7 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Microchiroptera ANCESTRAL SPECIES 6 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Microbat MODERN SPECIES 1151 CD93 (ENSMLUG00000011185) NXT1 (ENSMLUG00000006881) GZF1 (ENSMLUG00000002194) NAPB (ENSMLUG00000002203) #7 CSTL1 (ENSMLUG00000002210) #8 CST11 (ENSMLUG00000002218) #9 ENSMLUG00000028493 CST8 (ENSMLUG00000002227) #12 ENSMLUG00000024267 #13 ENSMLUG00000007975 #14 CST3 (ENSMLUG00000028312) #17 ENSMLUG00000010298 ENSMLUG00000026533 ENSMLUG00000011668 SYNDIG1 (ENSMLUG00000012716) #20 CST7 (ENSMLUG00000004912) #22 APMAP (ENSMLUG00000010717) #23 ACSS1 (ENSMLUG00000000710) #24 ENTPD6 (ENSMLUG00000009410) #26 PYGB (ENSMLUG00000009430) #27 ABHD12 (ENSMLUG00000009465) #28 GINS1 (ENSMLUG00000000885) #29 NINL (ENSMLUG00000000892) #31 NANP (ENSMLUG00000017312) #32 Greater horseshoe bat MODERN SPECIES 15 ENSRFEG00010012588 ENSRFEG00010012569 SYNDIG1 (ENSRFEG00010012536) #20 CST7 (ENSRFEG00010012468) #22 APMAP (ENSRFEG00010012419) #23 ACSS1 (ENSRFEG00010012326) #24 VSX1 (ENSRFEG00010012058) #25 ENTPD6 (ENSRFEG00010011594) #26 ENSRFEG00010011488 #27 ABHD12 (ENSRFEG00010011429) #28 GINS1 (ENSRFEG00010011337) #29 NINL (ENSRFEG00010011279) #31 NANP (ENSRFEG00010011232) #32 CST3 (ENSRFEG00010011121) #17 CST9L (ENSRFEG00010011055) #14 ENSRFEG00010011001 #13 ENSRFEG00010010952 CST11 (ENSRFEG00010010901) #9 CSTL1 (ENSRFEG00010010843) #8 Megabat MODERN SPECIES 4987 CST7 (ENSPVAG00000011465) #22 Equus ANCESTRAL SPECIES 8 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT00390000003094 #32 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000160517 #28 ENSGT00950000183148.b.b #27 ENSGT01100000263540.A.a #26 Donkey MODERN SPECIES 6 FOXA2 (ENSEASG00005002535) SSTR4 (ENSEASG00005002540) THBD (ENSEASG00005027531) CD93 (ENSEASG00005002547) NXT1 (ENSEASG00005033641) GZF1 (ENSEASG00005002557) NAPB (ENSEASG00005002564) #7 CSTL1 (ENSEASG00005002572) #8 CST11 (ENSEASG00005002576) #9 ENSEASG00005031840 CST8 (ENSEASG00005030555) #12 ENSEASG00005025391 #13 ENSEASG00005027176 #14 ENSEASG00005002598 #17 ENSEASG00005002614 #20 CST7 (ENSEASG00005029197) #22 APMAP (ENSEASG00005002617) #23 ACSS1 (ENSEASG00005002623) #24 ENSEASG00005030814 #25 ENSEASG00005033023 ENSEASG00005024200 ENSEASG00005031105 #32 NINL (ENSEASG00005003350) #31 GINS1 (ENSEASG00005003329) #29 ABHD12 (ENSEASG00005003318) #28 PYGB (ENSEASG00005003306) #27 ENSEASG00005003299 #26 Horse MODERN SPECIES 14 FOXA2 (ENSECAG00000032004) THBD (ENSECAG00000005241) CD93 (ENSECAG00000016324) NXT1 (ENSECAG00000035032) GZF1 (ENSECAG00000011343) NAPB (ENSECAG00000022016) #7 CSTL1 (ENSECAG00000019672) #8 CST11 (ENSECAG00000016342) #9 ENSECAG00000014988 #10 CST8 (ENSECAG00000029932) #12 CST9L (ENSECAG00000010654) #14 ENSECAG00000045045 #13 CST3 (ENSECAG00000038893) #17 SYNDIG1 (ENSECAG00000006421) #20 ENSECAG00000050617 CST7 (ENSECAG00000000268) #22 APMAP (ENSECAG00000014524) #23 ACSS1 (ENSECAG00000023870) #24 ENSECAG00000042915 ENSECAG00000056853 NANP (ENSECAG00000039564) #32 NINL (ENSECAG00000019590) #31 ENSECAG00000053094 GINS1 (ENSECAG00000026939) #29 ENSECAG00000033721 ABHD12 (ENSECAG00000005769) #28 PYGB (ENSECAG00000022048) #27 ENTPD6 (ENSECAG00000013042) #26 ENSECAG00000003028 #25 Carnivora ANCESTRAL SPECIES 20 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.n #14 ENSGT00940000154755.e.a #17 ENSGT00940000163410 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Felidae ANCESTRAL SPECIES 3 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00950000182865.b.a.b.b.a.b ENSGT00940000163249 #13 ENSGT00940000161877.n #14 ENSGT00940000154755.e.a #17 ENSGT00940000163410.k ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00940000154389.a Panthera ANCESTRAL SPECIES 2 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00950000182865.b.a.b.b.a.b ENSGT00940000163249 #13 ENSGT00940000161877.n #14 ENSGT00940000154755.e.a #17 ENSGT00940000163410.k ENSGT00940000154755.e.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00940000154389.a Panthera_a ANCESTRAL SPECIES 1 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00950000182865.b.a.b.b.a.b ENSGT00940000163249 #13 ENSGT00940000161877.n #14 ENSGT00940000154755.e.a #17 ENSGT00940000163410.k ENSGT00940000154755.e.b #17 ENSGT00950000183147.B #20 ENSGT00940000157034.kb ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183003.a.a.b ENSGT00940000155238 ENSGT00940000160405 ENSGT00940000153259.a.b ENSGT00390000000217 ENSGT00940000154389.a lion MODERN SPECIES 3 CD93 (ENSPLOG00000000855) NXT1 (ENSPLOG00000000844) GZF1 (ENSPLOG00000000839) NAPB (ENSPLOG00000000809) #7 CSTL1 (ENSPLOG00000000776) #8 CST11 (ENSPLOG00000000758) #9 ENSPLOG00000000735 #10 ENSPLOG00000000715 CST8 (ENSPLOG00000000695) #12 ENSPLOG00000000686 #13 CST9L (ENSPLOG00000000670) #14 CST3 (ENSPLOG00000000650) #17 ENSPLOG00000000559 SYNDIG1 (ENSPLOG00000000543) #20 ENSPLOG00000000534 CST7 (ENSPLOG00000000513) #22 APMAP (ENSPLOG00000000494) #23 ACSS1 (ENSPLOG00000000456) #24 VSX1 (ENSPLOG00000000431) #25 ENTPD6 (ENSPLOG00000000325) #26 PYGB (ENSPLOG00000000286) #27 ABHD12 (ENSPLOG00000000259) #28 GINS1 (ENSPLOG00000000243) #29 ENSPLOG00000000237 NINL (ENSPLOG00000000216) #31 NANP (ENSPLOG00000000195) #32 SOWAHC (ENSPLOG00000000181) SEPTIN10 (ENSPLOG00000000161) SH3RF3 (ENSPLOG00000000136) EDAR (ENSPLOG00000000113) CCDC138 (ENSPLOG00000020856) leopard MODERN SPECIES 208 CST7 (ENSPPRG00000003000) #22 APMAP (ENSPPRG00000002994) #23 ACSS1 (ENSPPRG00000002978) #24 VSX1 (ENSPPRG00000002878) #25 ENTPD6 (ENSPPRG00000002863) #26 PYGB (ENSPPRG00000002716) #27 ABHD12 (ENSPPRG00000002701) #28 GINS1 (ENSPPRG00000002684) #29 NANP (ENSPPRG00000002568) #32 Tiger MODERN SPECIES 535 SSTR4 (ENSPTIG00000003769) CD93 (ENSPTIG00000018580) NXT1 (ENSPTIG00000003788) GZF1 (ENSPTIG00000019328) NAPB (ENSPTIG00000019947) #7 ENSPTIG00000001355 CST11 (ENSPTIG00000003091) #9 ENSPTIG00000005550 #10 ENSPTIG00000005641 CST8 (ENSPTIG00000006377) #12 ENSPTIG00000007155 #13 CST9L (ENSPTIG00000007266) #14 ENSPTIG00000007325 ENSPTIG00000007645 SYNDIG1 (ENSPTIG00000008709) #20 CST7 (ENSPTIG00000009188) #22 APMAP (ENSPTIG00000009330) #23 ACSS1 (ENSPTIG00000010066) #24 ENSPTIG00000004550 VSX1 (ENSPTIG00000012183) #25 ENTPD6 (ENSPTIG00000013005) #26 PYGB (ENSPTIG00000014087) #27 ABHD12 (ENSPTIG00000016315) #28 GINS1 (ENSPTIG00000017055) #29 NANP (ENSPTIG00000020107) #32 Cat MODERN SPECIES 2 CD93 (ENSFCAG00000025238) NXT1 (ENSFCAG00000006482) GZF1 (ENSFCAG00000006484) NAPB (ENSFCAG00000037279) #7 CSTL1 (ENSFCAG00000041684) #8 CST11 (ENSFCAG00000003949) #9 ENSFCAG00000026179 #10 ENSFCAG00000042989 CST8 (ENSFCAG00000023255) #12 ENSFCAG00000023071 ENSFCAG00000027887 #13 ENSFCAG00000030881 #14 CST3 (ENSFCAG00000038525) #17 ENSFCAG00000035754 SYNDIG1 (ENSFCAG00000033652) #20 CST7 (ENSFCAG00000014543) #22 APMAP (ENSFCAG00000030449) #23 ACSS1 (ENSFCAG00000014545) #24 ENSFCAG00000031750 VSX1 (ENSFCAG00000014546) #25 ENTPD6 (ENSFCAG00000027966) #26 PYGB (ENSFCAG00000008415) #27 ABHD12 (ENSFCAG00000008419) #28 GINS1 (ENSFCAG00000042801) #29 NINL (ENSFCAG00000005402) #31 NANP (ENSFCAG00000036408) #32 SOWAHC (ENSFCAG00000022998) SEPTIN10 (ENSFCAG00000001967) SH3RF3 (ENSFCAG00000029081) EDAR (ENSFCAG00000012594) CCDC138 (ENSFCAG00000030803) Caniformia ANCESTRAL SPECIES ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.m #14 ENSGT00940000161877.n #14 ENSGT00940000154755.e.a #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a Canidae ANCESTRAL SPECIES 24 ENSGT00940000161877.n #14 ENSGT00940000154755.e.a #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a Canis_lupus ANCESTRAL SPECIES 27 ENSGT00940000161877.n #14 ENSGT00940000154755.e.a #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094.c #32 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a Dog MODERN SPECIES 15 ENSCAFG00845028258 ENSCAFG00845028282 ENSCAFG00845028318 #14 ENSCAFG00845028353 #17 SYNDIG1 (ENSCAFG00845028405) #20 ENSCAFG00845028430 ENSCAFG00845028470 ENSCAFG00845028509 #22 APMAP (ENSCAFG00845028549) #23 ACSS1 (ENSCAFG00845028598) #24 VSX1 (ENSCAFG00845028643) #25 ENTPD6 (ENSCAFG00845028707) #26 PYGB (ENSCAFG00845028916) #27 ABHD12 (ENSCAFG00845028992) #28 ENSCAFG00845029035 GINS1 (ENSCAFG00845029067) #29 NINL (ENSCAFG00845029110) #31 NANP (ENSCAFG00845029217) #32 ENSCAFG00845029250 ENSCAFG00845019227 ZNF445 (ENSCAFG00845019305) ENSCAFG00845019385 ENSCAFG00845019630 Dingo MODERN SPECIES 326 CST9L (ENSCAFG00020006315) #14 ENSCAFG00020006310 #17 ENSCAFG00020006309 SYNDIG1 (ENSCAFG00020006293) #20 ENSCAFG00020006286 ENSCAFG00020006285 CST7 (ENSCAFG00020006277) #22 APMAP (ENSCAFG00020006264) #23 ACSS1 (ENSCAFG00020005947) #24 VSX1 (ENSCAFG00020005925) #25 ENTPD6 (ENSCAFG00020005916) #26 PYGB (ENSCAFG00020005902) #27 ENSCAFG00020005810 #28 GINS1 (ENSCAFG00020005786) #29 NINL (ENSCAFG00020005723) #31 ENSCAFG00020005719 #32 ENSCAFG00020005712 ENSCAFG00020005711 ZNF445 (ENSCAFG00020005703) TCAIM (ENSCAFG00020005698) TOPAZ1 (ENSCAFG00020005672) ENSCAFG00020005662 Red fox MODERN SPECIES 122 ENSVVUG00000022490 #17 SYNDIG1 (ENSVVUG00000022475) #20 ENSVVUG00000022444 CST7 (ENSVVUG00000022440) #22 APMAP (ENSVVUG00000022438) #23 ACSS1 (ENSVVUG00000022431) #24 ENSVVUG00000022428 #25 ENTPD6 (ENSVVUG00000022415) #26 PYGB (ENSVVUG00000022373) #27 ABHD12 (ENSVVUG00000022271) #28 GINS1 (ENSVVUG00000022265) #29 NINL (ENSVVUG00000022254) #31 ENSVVUG00000022250 NANP (ENSVVUG00000022249) #32 ZKSCAN7 (ENSVVUG00000022246) ENSVVUG00000022234 ZNF445 (ENSVVUG00000022223) TCAIM (ENSVVUG00000022195) TOPAZ1 (ENSVVUG00000022169) Caniformia_b ANCESTRAL SPECIES ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.m.b #14 ENSGT00940000161877.n #14 ENSGT00940000161877.m.a #14 ENSGT00940000154755.e.a #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a Mustelinae ANCESTRAL SPECIES 43 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.n #14 ENSGT00940000161877.m.a #14 ENSGT00940000154755.e.a #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 American mink MODERN SPECIES 392 SYNDIG1 (ENSNVIG00000007628) #20 CYTF (ENSNVIG00000007712) #22 APMAP (ENSNVIG00000007822) #23 ACSS1 (ENSNVIG00000007966) #24 ENSNVIG00000008026 ENSNVIG00000008047 Ferret MODERN SPECIES 204 SSTR4 (ENSMPUG00000019271) THBD (ENSMPUG00000019265) CD93 (ENSMPUG00000001163) NXT1 (ENSMPUG00000019260) GZF1 (ENSMPUG00000001160) NAPB (ENSMPUG00000001158) #7 CST11 (ENSMPUG00000001154) #9 ENSMPUG00000001151 CST8 (ENSMPUG00000001143) #12 ENSMPUG00000001140 ENSMPUG00000001138 #14 ENSMPUG00000001137 #14 CST3 (ENSMPUG00000001122) #17 ENSMPUG00000001119 SYNDIG1 (ENSMPUG00000001115) #20 CST7 (ENSMPUG00000001114) #22 APMAP (ENSMPUG00000001112) #23 ACSS1 (ENSMPUG00000001109) #24 ENSMPUG00000001101 Ursidae ANCESTRAL SPECIES 64 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00390000003094 #32 Giant Panda MODERN SPECIES 16 ATAD1 (ENSAMEG00000000672) ENSAMEG00000000606 ENSAMEG00000000595 ENSAMEG00000000577 ENSAMEG00000000551 ENSAMEG00000000523 CSTF2T (ENSAMEG00000028492) PRKG1 (ENSAMEG00000003362) DKK1 (ENSAMEG00000003369) ENSAMEG00000025693 PCDH15 (ENSAMEG00000015978) ENSAMEG00000005342 ENSAMEG00000030632 ENSAMEG00000030010 #17 ENSAMEG00000000530 #20 CST7 (ENSAMEG00000014248) #22 APMAP (ENSAMEG00000014230) #23 ACSS1 (ENSAMEG00000014206) #24 ENSAMEG00000003561 #26 PYGB (ENSAMEG00000003436) #27 ABHD12 (ENSAMEG00000003400) #28 ENSAMEG00000028823 #31 ENSAMEG00000001886 ENSAMEG00000026067 ENSAMEG00000009413 TOPAZ1 (ENSAMEG00000027745) ABHD5 (ENSAMEG00000015600) ENSAMEG00000015613 ENSAMEG00000005957 ENSAMEG00000002236 UBP1 (ENSAMEG00000002341) Ursus ANCESTRAL SPECIES 313 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 American black bear MODERN SPECIES 7117 CST7 (ENSUAMG00000024982) #22 Polar bear MODERN SPECIES 271 SYNDIG1 (ENSUMAG00000012097) #20 ENSUMAG00000012087 #22 APMAP (ENSUMAG00000012073) #23 ACSS1 (ENSUMAG00000011645) #24 Artiodactyla ANCESTRAL SPECIES 18 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Suina ANCESTRAL SPECIES 9 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT00390000013178 Chacoan peccary MODERN SPECIES 801 PAX1 (ENSCWAG00000008052) FOXA2 (ENSCWAG00000007985) THBD (ENSCWAG00000017996) CD93 (ENSCWAG00000017965) NXT1 (ENSCWAG00000017956) GZF1 (ENSCWAG00000017910) NAPB (ENSCWAG00000017225) #7 CSTL1 (ENSCWAG00000017189) #8 CST11 (ENSCWAG00000017158) #9 ENSCWAG00000017127 CST8 (ENSCWAG00000017086) #12 ENSCWAG00000017060 #13 ENSCWAG00000017004 #14 CST3 (ENSCWAG00000016979) #17 SYNDIG1 (ENSCWAG00000016959) #20 CST7 (ENSCWAG00000016930) #22 APMAP (ENSCWAG00000016906) #23 ACSS1 (ENSCWAG00000016802) #24 VSX1 (ENSCWAG00000016751) #25 ENTPD6 (ENSCWAG00000016646) #26 PYGB (ENSCWAG00000016599) #27 ABHD12 (ENSCWAG00000016565) #28 GINS1 (ENSCWAG00000016501) #29 NINL (ENSCWAG00000016442) #31 NANP (ENSCWAG00000016415) #32 ADRA1D (ENSCWAG00000016385) SMOX (ENSCWAG00000016321) RNF24 (ENSCWAG00000016269) PANK2 (ENSCWAG00000016218) MAVS (ENSCWAG00000016195) AP5S1 (ENSCWAG00000016155) Pig MODERN SPECIES 8 PAX1 (ENSSSCG00000007112) FOXA2 (ENSSSCG00000007114) THBD (ENSSSCG00000053422) CD93 (ENSSSCG00000007116) NXT1 (ENSSSCG00000007119) GZF1 (ENSSSCG00000007117) NAPB (ENSSSCG00000031219) #7 CSTL1 (ENSSSCG00000007121) #8 CST11 (ENSSSCG00000007122) #9 ENSSSCG00000007123 ENSSSCG00000007124 #12 ENSSSCG00000007125 #13 CST9L (ENSSSCG00000029289) #14 CST3 (ENSSSCG00000037360) #17 SYNDIG1 (ENSSSCG00000007130) #20 CST7 (ENSSSCG00000007131) #22 APMAP (ENSSSCG00000036286) #23 ACSS1 (ENSSSCG00000007133) #24 VSX1 (ENSSSCG00000023887) #25 ENTPD6 (ENSSSCG00000027070) #26 PYGB (ENSSSCG00000022815) #27 ABHD12 (ENSSSCG00000040449) #28 GINS1 (ENSSSCG00000034913) #29 ENSSSCG00000007135 #31 NANP (ENSSSCG00000053479) #32 ENSSSCG00000035283 ENSSSCG00000063198 ADRA1D (ENSSSCG00000007139) SMOX (ENSSSCG00000007140) RNF24 (ENSSSCG00000059435) PANK2 (ENSSSCG00000007142) Artiodactyla_a ANCESTRAL SPECIES 16 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Artiodactyla_b ANCESTRAL SPECIES 17 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.i #14 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000182767.b.a.b.b.a ENSGT00390000007046.b.a.a.fb ENSGT00940000162838 ENSGT00940000159704 ENSGT00940000157404 ENSGT00940000161298 Cetacea ANCESTRAL SPECIES 3 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000182767.b.a.b.b.a ENSGT00390000007046.b.a.a.fb ENSGT00940000162977 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000161298 Odontoceti ANCESTRAL SPECIES 3 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000182767.b.a.b.b.a ENSGT00390000007046.b.a.a.fb ENSGT00940000162977 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000161298 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000182767.b.a.b.b.a ENSGT00390000007046.b.a.a.fb ENSGT00940000162977 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000161298 Dolphin MODERN SPECIES 2301 ENSTTRG00000001629 #22 APMAP (ENSTTRG00000001630) #23 ACSS1 (ENSTTRG00000001631) #24 VSX1 (ENSTTRG00000001632) #25 ENTPD6 (ENSTTRG00000001633) #26 PYGB (ENSTTRG00000001634) #27 ABHD12 (ENSTTRG00000001636) #28 GINS1 (ENSTTRG00000001637) #29 ENSTTRG00000001638 #31 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000182767.b.a.b.b.a ENSGT00390000007046.b.a.a.fb ENSGT00940000162977 ENSGT01010000228897 ENSGT00940000159704 ENSGT00940000157404 Vaquita MODERN SPECIES 6 XRN2 (ENSPSNG00000004918) NKX2-4 (ENSPSNG00000004868) NKX2-2 (ENSPSNG00000004832) PAX1 (ENSPSNG00000004773) FOXA2 (ENSPSNG00000004696) SSTR4 (ENSPSNG00000011467) THBD (ENSPSNG00000011441) CD93 (ENSPSNG00000011407) NXT1 (ENSPSNG00000011355) GZF1 (ENSPSNG00000011314) ENSPSNG00000011208 #7 ENSPSNG00000011147 #13 ENSPSNG00000011009 #14 CST3 (ENSPSNG00000010957) #17 SYNDIG1 (ENSPSNG00000010897) #20 CST7 (ENSPSNG00000010836) #22 APMAP (ENSPSNG00000010757) #23 ACSS1 (ENSPSNG00000010625) #24 VSX1 (ENSPSNG00000010521) #25 ENTPD6 (ENSPSNG00000010051) #26 PYGB (ENSPSNG00000009852) #27 ABHD12 (ENSPSNG00000009768) #28 GINS1 (ENSPSNG00000009717) #29 ENSPSNG00000009688 #31 ENSPSNG00000009624 #32 OTOR (ENSPSNG00000009573) SNRPB2 (ENSPSNG00000009531) ENSPSNG00000009313 ENSPSNG00000009177 FLRT3 (ENSPSNG00000009154) MACROD2 (ENSPSNG00000009064) Monodontidae ANCESTRAL SPECIES 1 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000182767.b.a.b.b.a ENSGT00390000007046.b.a.a.fb ENSGT00390000007741.a.c.b ENSGT00940000162977 ENSGT01010000228897 ENSGT00940000159704 Narwhal MODERN SPECIES 299 NKX2-2 (ENSMMNG00015013937) PAX1 (ENSMMNG00015013924) FOXA2 (ENSMMNG00015013909) SSTR4 (ENSMMNG00015013888) THBD (ENSMMNG00015013881) CD93 (ENSMMNG00015013869) NXT1 (ENSMMNG00015013866) GZF1 (ENSMMNG00015013857) ENSMMNG00015013840 #7 CSTL1 (ENSMMNG00015013827) #8 CST11 (ENSMMNG00015013816) #9 ENSMMNG00015013807 #13 ENSMMNG00015013782 #14 CST3 (ENSMMNG00015013767) #17 SYNDIG1 (ENSMMNG00015013754) #20 CST7 (ENSMMNG00015013746) #22 APMAP (ENSMMNG00015013737) #23 ACSS1 (ENSMMNG00015013713) #24 VSX1 (ENSMMNG00015013692) #25 ENTPD6 (ENSMMNG00015013636) #26 PYGB (ENSMMNG00015013588) #27 ABHD12 (ENSMMNG00015013554) #28 GINS1 (ENSMMNG00015013542) #29 ENSMMNG00015013530 #31 NANP (ENSMMNG00015013521) #32 OTOR (ENSMMNG00015013507) SNRPB2 (ENSMMNG00015013493) ENSMMNG00015013482 ENSMMNG00015013413 ENSMMNG00015013374 FLRT3 (ENSMMNG00015013368) Beluga whale MODERN SPECIES 48 PAX1 (ENSDLEG00000005123) FOXA2 (ENSDLEG00000005115) SSTR4 (ENSDLEG00000005108) THBD (ENSDLEG00000005104) CD93 (ENSDLEG00000005100) NXT1 (ENSDLEG00000005096) GZF1 (ENSDLEG00000005091) ENSDLEG00000005080 #7 CSTL1 (ENSDLEG00000005075) #8 CST11 (ENSDLEG00000005067) #9 ENSDLEG00000005044 #10 ENSDLEG00000005035 #13 ENSDLEG00000005018 #14 CST3 (ENSDLEG00000004985) #17 SYNDIG1 (ENSDLEG00000004982) #20 CST7 (ENSDLEG00000004970) #22 APMAP (ENSDLEG00000004961) #23 ACSS1 (ENSDLEG00000004910) #24 VSX1 (ENSDLEG00000004879) #25 ENTPD6 (ENSDLEG00000004868) #26 PYGB (ENSDLEG00000004842) #27 ABHD12 (ENSDLEG00000004821) #28 GINS1 (ENSDLEG00000004814) #29 ENSDLEG00000004804 #31 NANP (ENSDLEG00000004799) #32 OTOR (ENSDLEG00000004794) SNRPB2 (ENSDLEG00000004783) KIF16B (ENSDLEG00000020641) ENSDLEG00000020625 ENSDLEG00000020618 ENSDLEG00000020611 Sperm whale MODERN SPECIES 5 NKX2-4 (ENSPCTG00005009959) NKX2-2 (ENSPCTG00005009931) PAX1 (ENSPCTG00005009858) FOXA2 (ENSPCTG00005009780) SSTR4 (ENSPCTG00005009716) CD93 (ENSPCTG00005009671) CST3 (ENSPCTG00005009637) #17 ENSPCTG00005009585 #14 ENSPCTG00005009530 #14 ENSPCTG00005009487 #13 ENSPCTG00005009442 #10 CST11 (ENSPCTG00005009381) #9 CSTL1 (ENSPCTG00005009306) #8 ENSPCTG00005009273 #7 ENSPCTG00005009228 #20 CST7 (ENSPCTG00005009166) #22 APMAP (ENSPCTG00005009088) #23 ENSPCTG00005009058 #24 VSX1 (ENSPCTG00005008966) #25 ENTPD6 (ENSPCTG00005008559) #26 ABHD12 (ENSPCTG00005008481) #28 GINS1 (ENSPCTG00005008454) #29 OTOR (ENSPCTG00005008309) SNRPB2 (ENSPCTG00005008280) ENSPCTG00005008258 KIF16B (ENSPCTG00005007936) FLRT3 (ENSPCTG00005007859) MACROD2 (ENSPCTG00005007778) SEL1L2 (ENSPCTG00005007423) NDUFAF5 (ENSPCTG00005007331) ESF1 (ENSPCTG00005007279) Blue whale MODERN SPECIES 6 CD93 (ENSBMSG00010012595) NXT1 (ENSBMSG00010012589) ENSBMSG00010012580 ENSBMSG00010012568 NAPB (ENSBMSG00010012544) #7 CSTL1 (ENSBMSG00010012521) #8 CST11 (ENSBMSG00010012502) #9 ENSBMSG00010012491 #10 ENSBMSG00010012475 CST8 (ENSBMSG00010012422) #12 ENSBMSG00010012402 #13 ENSBMSG00010012390 #14 ENSBMSG00010012375 #14 CST3 (ENSBMSG00010012360) #17 SYNDIG1 (ENSBMSG00010012350) #20 CST7 (ENSBMSG00010012340) #22 APMAP (ENSBMSG00010012326) #23 ACSS1 (ENSBMSG00010012293) #24 VSX1 (ENSBMSG00010012276) #25 ENSBMSG00010012263 ENTPD6 (ENSBMSG00010012199) #26 PYGB (ENSBMSG00010012160) #27 ABHD12 (ENSBMSG00010012129) #28 GINS1 (ENSBMSG00010012115) #29 ENSBMSG00010012105 #31 ENSBMSG00010012091 #32 OTOR (ENSBMSG00010012080) SNRPB2 (ENSBMSG00010012064) ENSBMSG00010012034 FLRT3 (ENSBMSG00010011999) MACROD2 (ENSBMSG00010011961) Pecora ANCESTRAL SPECIES 9 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.i #14 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00940000153969.a ENSGT00950000182994.B.a.b.e.a.b ENSGT00530000063735.b ENSGT00940000160326 ENSGT00950000183739 ENSGT00940000163406 ENSGT00940000155849 ENSGT00940000162594 ENSGT00940000160568.m Yarkand deer MODERN SPECIES 15 CD93 (ENSCHYG00000023556) NXT1 (ENSCHYG00000023576) GZF1 (ENSCHYG00000023598) NAPB (ENSCHYG00000023659) #7 ENSCHYG00000023804 #8 ENSCHYG00000023824 #9 ENSCHYG00000023860 #10 ENSCHYG00000023874 ENSCHYG00000023900 #12 ENSCHYG00000023931 #13 ENSCHYG00000023958 #14 ENSCHYG00000023998 #14 CST3 (ENSCHYG00000024014) #17 SYNDIG1 (ENSCHYG00000024042) #20 APMAP (ENSCHYG00000024095) #23 ENSCHYG00000024206 #22 ACSS1 (ENSCHYG00000024231) #24 VSX1 (ENSCHYG00000024285) #25 ENTPD6 (ENSCHYG00000024367) #26 PYGB (ENSCHYG00000024495) #27 ABHD12 (ENSCHYG00000024569) #28 ENSCHYG00000013693 GDI2 (ENSCHYG00000013832) TASOR2 (ENSCHYG00000014279) ASB13 (ENSCHYG00000014908) CALML5 (ENSCHYG00000015185) ENSCHYG00000015219 NET1 (ENSCHYG00000015284) TUBAL3 (ENSCHYG00000015848) UCN3 (ENSCHYG00000015962) ENSCHYG00000016140 Percora_a ANCESTRAL SPECIES 10 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.i #14 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00940000153969.a ENSGT00950000182994.B.a.b.e.a.b ENSGT00530000063735.b ENSGT00940000160326 ENSGT00950000183739 ENSGT00940000163406 ENSGT00940000155849 ENSGT00940000162594 ENSGT00940000160568.m Siberian musk deer MODERN SPECIES 1194 FOXA2 (ENSMMSG00000018910) THBD (ENSMMSG00000018897) CD93 (ENSMMSG00000018871) NXT1 (ENSMMSG00000018866) GZF1 (ENSMMSG00000018836) NAPB (ENSMMSG00000018763) #7 CSTL1 (ENSMMSG00000018731) #8 ENSMMSG00000018712 #9 ENSMMSG00000018676 #10 ENSMMSG00000018653 CST8 (ENSMMSG00000018626) #12 ENSMMSG00000018603 #13 ENSMMSG00000018584 #14 CST3 (ENSMMSG00000018564) #17 SYNDIG1 (ENSMMSG00000018548) #20 CST7 (ENSMMSG00000018529) #22 APMAP (ENSMMSG00000018481) #23 ACSS1 (ENSMMSG00000018444) #24 VSX1 (ENSMMSG00000018374) #25 ENTPD6 (ENSMMSG00000018269) #26 PYGB (ENSMMSG00000018208) #27 ABHD12 (ENSMMSG00000018158) #28 ANKRD16 (ENSMMSG00000018094) ENSMMSG00000017856 TASOR2 (ENSMMSG00000017630) ASB13 (ENSMMSG00000017589) ENSMMSG00000017556 NET1 (ENSMMSG00000017503) TUBAL3 (ENSMMSG00000017448) UCN3 (ENSMMSG00000017437) ENSMMSG00000017397 Bovidae ANCESTRAL SPECIES 10 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.i #14 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00940000153969.a ENSGT00950000182994.B.a.b.e.a.b.a ENSGT00530000063735.b ENSGT00940000160326 ENSGT00950000183739 ENSGT00940000163406 ENSGT00940000155849 ENSGT00940000162594 ENSGT00940000160568.m Bovinae ANCESTRAL SPECIES 20 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00940000153969.a ENSGT00950000182994.B.a.b.e.b ENSGT00950000182994.B.a.b.e.a.b.a ENSGT00530000063735.b ENSGT00940000160326 ENSGT00950000183739 ENSGT00940000163406 ENSGT00940000155849 ENSGT00940000162594 Bos ANCESTRAL SPECIES 22 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554.jb ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00940000153969.a ENSGT00950000182994.B.a.b.e.b ENSGT00390000003289.g.b ENSGT00950000182994.B.a.b.e.a.b.b.b ENSGT00530000063735.b ENSGT00940000160326 ENSGT00950000183739 ENSGT00940000163406 ENSGT00940000155849 Bos_a ANCESTRAL SPECIES 7 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554.jb ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00940000153969.a ENSGT00950000182994.B.a.b.e.b ENSGT00390000003289.g.b ENSGT00950000182994.B.a.b.e.a.b.b.b ENSGT00530000063735.b ENSGT00940000160326 ENSGT00950000183739 ENSGT00940000163406 ENSGT00940000155849 Wild yak MODERN SPECIES 1228 SYNDIG1 (ENSBMUG00000005390) #20 CST7 (ENSBMUG00000005404) #22 ENSBMUG00000005410 #23 Domestic yak MODERN SPECIES 3 CD93 (ENSBGRG00000006986) ENSBGRG00000007043 NXT1 (ENSBGRG00000007076) ENSBGRG00000007097 ENSBGRG00000007150 NAPB (ENSBGRG00000007201) #7 CSTL1 (ENSBGRG00000007456) #8 ENSBGRG00000007520 #9 ENSBGRG00000007612 #10 ENSBGRG00000007655 CST8 (ENSBGRG00000007704) #12 ENSBGRG00000007774 #13 ENSBGRG00000007806 #14 CST3 (ENSBGRG00000007838) #17 SYNDIG1 (ENSBGRG00000007905) #20 CST7 (ENSBGRG00000008014) #22 APMAP (ENSBGRG00000008063) #23 ACSS1 (ENSBGRG00000008277) #24 VSX1 (ENSBGRG00000008489) #25 ENTPD6 (ENSBGRG00000008602) #26 PYGB (ENSBGRG00000008678) #27 ABHD12 (ENSBGRG00000008988) #28 ANKRD16 (ENSBGRG00000009203) ENSBGRG00000009324 ENSBGRG00000009364 TASOR2 (ENSBGRG00000009524) ASB13 (ENSBGRG00000010215) NET1 (ENSBGRG00000010362) TUBAL3 (ENSBGRG00000010624) UCN3 (ENSBGRG00000010758) ENSBGRG00000010844 Bos_b ANCESTRAL SPECIES 4 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554.jb ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00940000153969.a ENSGT00390000003289.g.b ENSGT00950000182994.B.a.b.e.a.b.b.b ENSGT00950000182994.B.a.b.e.a.b.a ENSGT00530000063735.b ENSGT00940000160326 ENSGT00940000163406 ENSGT00940000155849 ENSGT00940000162594 Hybrid Bos Indicus MODERN SPECIES 4 THBD (ENSBIXG00005010640) ENSBIXG00005000916 CD93 (ENSBIXG00005010666) NXT1 (ENSBIXG00005010690) GZF1 (ENSBIXG00005010698) NAPB (ENSBIXG00005000942) #7 ENSBIXG00005000943 #8 ENSBIXG00005010800 #9 ENSBIXG00005000950 #10 ENSBIXG00005010816 CST8 (ENSBIXG00005006779) #12 ENSBIXG00005000954 #13 ENSBIXG00005010849 #14 ENSBIXG00005010878 #17 SYNDIG1 (ENSBIXG00005010911) #20 CST7 (ENSBIXG00005000982) #22 APMAP (ENSBIXG00005010989) #23 ACSS1 (ENSBIXG00005011033) #24 VSX1 (ENSBIXG00005011089) #25 ENTPD6 (ENSBIXG00005011132) #26 PYGB (ENSBIXG00005011231) #27 ABHD12 (ENSBIXG00005011264) #28 ANKRD16 (ENSBIXG00005011301) ENSBIXG00005011317 ENSBIXG00005011350 TASOR2 (ENSBIXG00005011497) ASB13 (ENSBIXG00005001128) NET1 (ENSBIXG00005001148) TUBAL3 (ENSBIXG00005011711) UCN3 (ENSBIXG00005011732) ENSBIXG00005011761 Cow MODERN SPECIES 4 ENSBTAG00000035643 PAX1 (ENSBTAG00000006742) FOXA2 (ENSBTAG00000012407) THBD (ENSBTAG00000048591) CD93 (ENSBTAG00000004207) NXT1 (ENSBTAG00000004993) GZF1 (ENSBTAG00000008908) NAPB (ENSBTAG00000032704) #7 ENSBTAG00000027420 MGC133636 (ENSBTAG00000013416) #10 CST8 (ENSBTAG00000032694) #12 ENSBTAG00000015949 #13 ENSBTAG00000032687 #14 CST3 (ENSBTAG00000000598) #17 SYNDIG1 (ENSBTAG00000040147) #20 CST7 (ENSBTAG00000004273) #22 APMAP (ENSBTAG00000004278) #23 ACSS1 (ENSBTAG00000004281) #24 VSX1 (ENSBTAG00000003335) #25 ENTPD6 (ENSBTAG00000009881) #26 PYGB (ENSBTAG00000004625) #27 ABHD12 (ENSBTAG00000001420) #28 ANKRD16 (ENSBTAG00000039071) ENSBTAG00000035572 GDI2 (ENSBTAG00000005316) TASOR2 (ENSBTAG00000019197) ASB13 (ENSBTAG00000018805) CALML5 (ENSBTAG00000013854) NET1 (ENSBTAG00000007648) TUBAL3 (ENSBTAG00000017740) UCN3 (ENSBTAG00000035696) American bison MODERN SPECIES 2997 PAX1 (ENSBBBG00000022763) FOXA2 (ENSBBBG00000022700) THBD (ENSBBBG00000022684) CD93 (ENSBBBG00000005967) GZF1 (ENSBBBG00000022655) NAPB (ENSBBBG00000022632) #7 CSTL1 (ENSBBBG00000022543) #8 ENSBBBG00000022535 #9 ENSBBBG00000022528 #10 ENSBBBG00000005942 CST8 (ENSBBBG00000022516) #12 ENSBBBG00000022506 #13 ENSBBBG00000022502 #14 CST3 (ENSBBBG00000005938) #17 SYNDIG1 (ENSBBBG00000022490) #20 ENSBBBG00000022484 #22 APMAP (ENSBBBG00000005932) #23 ACSS1 (ENSBBBG00000022438) #24 ENSBBBG00000022411 VSX1 (ENSBBBG00000022405) #25 ENTPD6 (ENSBBBG00000022389) #26 PYGB (ENSBBBG00000022349) #27 ABHD12 (ENSBBBG00000022329) #28 ANKRD16 (ENSBBBG00000022315) ENSBBBG00000022296 ENSBBBG00000022269 ENSBBBG00000022254 TASOR2 (ENSBBBG00000022161) ASB13 (ENSBBBG00000022092) ENSBBBG00000022078 CALML5 (ENSBBBG00000022070) Caprinae ANCESTRAL SPECIES 23 ENSGT00940000156996 ENSGT00950000183014.f.a.h.u.a.a.b.a ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877.i #14 ENSGT00940000161877.j #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00940000153969.a ENSGT00950000182994.B.a.b.e.a.b.a ENSGT00530000063735.b ENSGT00940000160326 ENSGT00940000163406 ENSGT00940000155849 ENSGT00940000162594 ENSGT00940000160568.m ENSGT00940000153677.s.a.b.b Goat MODERN SPECIES 4 ENSCHIG00000022438 THBD (ENSCHIG00000010975) CD93 (ENSCHIG00000009092) ENSCHIG00000021979 GZF1 (ENSCHIG00000008882) NAPB (ENSCHIG00000020249) #7 ENSCHIG00000021813 #9 ENSCHIG00000003642 #10 ENSCHIG00000017766 ENSCHIG00000025947 #12 ENSCHIG00000021829 #13 ENSCHIG00000009930 #14 ENSCHIG00000022173 #14 CST3 (ENSCHIG00000009090) #17 SYNDIG1 (ENSCHIG00000020378) #20 CST7 (ENSCHIG00000021898) #22 APMAP (ENSCHIG00000013115) #23 ACSS1 (ENSCHIG00000021744) #24 VSX1 (ENSCHIG00000022900) #25 ENTPD6 (ENSCHIG00000013273) #26 PYGB (ENSCHIG00000025986) #27 ABHD12 (ENSCHIG00000021501) #28 ANKRD16 (ENSCHIG00000013205) ENSCHIG00000026283 TASOR2 (ENSCHIG00000014086) ASB13 (ENSCHIG00000022650) CALML5 (ENSCHIG00000009932) NET1 (ENSCHIG00000004441) TUBAL3 (ENSCHIG00000019472) UCN3 (ENSCHIG00000007165) ENSCHIG00000017096 Rambouillet Sheep MODERN SPECIES 182 ENSOARG00020018916 #22 Camelidae ANCESTRAL SPECIES 49 ENSGT00940000155999 ENSGT00940000166261 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000165454 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 Arabian camel MODERN SPECIES 10 CD93 (ENSCDRG00005019688) ENSCDRG00005019685 GZF1 (ENSCDRG00005019674) ENSCDRG00005019640 #7 CSTL1 (ENSCDRG00005019624) #8 ENSCDRG00005019617 #9 ENSCDRG00005019599 #10 ENSCDRG00005019579 CST8 (ENSCDRG00005019565) #12 ENSCDRG00005019553 #13 ENSCDRG00005019539 #14 ENSCDRG00005019533 #14 ENSCDRG00005019523 #14 CST3 (ENSCDRG00005019511) #17 SYNDIG1 (ENSCDRG00005019502) #20 CST7 (ENSCDRG00005019480) #22 APMAP (ENSCDRG00005019456) #23 ACSS1 (ENSCDRG00005019447) #24 VSX1 (ENSCDRG00005019387) #25 ENTPD6 (ENSCDRG00005019115) #26 PYGB (ENSCDRG00005019048) #27 ABHD12 (ENSCDRG00005018892) #28 GINS1 (ENSCDRG00005018861) #29 NINL (ENSCDRG00005018825) #31 ENSCDRG00005018801 #32 ENSCDRG00005018772 ENSCDRG00005018747 Atlantogenata ANCESTRAL SPECIES 6 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041.l ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.B #10 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 Afrotheria ANCESTRAL SPECIES 3 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041.l ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00660000095541.a.a #31 Afrotheria_a ANCESTRAL SPECIES 3 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041.l ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00900000141212 #8 ENSGT00910000144356 #9 ENSGT00940000162636.A #11 ENSGT00940000162294 #12 ENSGT00940000163249 #13 ENSGT00940000161877 #14 ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00660000095541.a.a #31 Elephant MODERN SPECIES 180 FOXA2 (ENSLAFG00000026345) ENSLAFG00000032254 THBD (ENSLAFG00000012832) CD93 (ENSLAFG00000027545) NXT1 (ENSLAFG00000029098) GZF1 (ENSLAFG00000002458) NAPB (ENSLAFG00000002461) #7 CSTL1 (ENSLAFG00000008243) #8 ENSLAFG00000008240 #9 ENSLAFG00000030756 #11 CST8 (ENSLAFG00000002803) #12 ENSLAFG00000006741 #13 ENSLAFG00000002805 #14 CST3 (ENSLAFG00000015020) #17 SYNDIG1 (ENSLAFG00000013030) #20 CST7 (ENSLAFG00000022218) #22 APMAP (ENSLAFG00000011820) #23 ACSS1 (ENSLAFG00000011493) #24 VSX1 (ENSLAFG00000018392) #25 ENTPD6 (ENSLAFG00000015560) #26 PYGB (ENSLAFG00000029096) #27 ABHD12 (ENSLAFG00000002307) #28 ENSLAFG00000012710 #31 ENSLAFG00000028792 NANP (ENSLAFG00000015738) #32 Hyrax MODERN SPECIES 7468 ENSPCAG00000009307 #22 Tenrec MODERN SPECIES 7733 ENSETEG00000015665 #22 APMAP (ENSETEG00000015666) #23 ACSS1 (ENSETEG00000015668) #24 Xenarthra ANCESTRAL SPECIES 693 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 Armadillo MODERN SPECIES 3290 ENSDNOG00000036314 CST7 (ENSDNOG00000031167) #22 ENSDNOG00000011129 #23 ACSS1 (ENSDNOG00000011785) #24 VSX1 (ENSDNOG00000002981) #25 ENTPD6 (ENSDNOG00000038546) #26 ENSDNOG00000038028 PYGB (ENSDNOG00000006034) #27 ABHD12 (ENSDNOG00000006066) #28 Marsupialia ANCESTRAL SPECIES 19 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00940000163249 #13 ENSGT00940000154755.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.a ENSGT00940000156844.b Opossum MODERN SPECIES ENSMODG00000040034 XRN2 (ENSMODG00000006163) NKX2-4 (ENSMODG00000006170) NKX2-2 (ENSMODG00000006177) PAX1 (ENSMODG00000006198) FOXA2 (ENSMODG00000006213) SSTR4 (ENSMODG00000023138) ENSMODG00000023139 CD93 (ENSMODG00000006221) ENSMODG00000044175 GZF1 (ENSMODG00000006238) NAPB (ENSMODG00000006277) #7 ENSMODG00000048042 #17 SYNDIG1 (ENSMODG00000006293) #20 ENSMODG00000044809 ENSMODG00000006300 #22 APMAP (ENSMODG00000006313) #23 ACSS1 (ENSMODG00000006345) #24 VSX1 (ENSMODG00000006351) #25 ENTPD6 (ENSMODG00000006375) #26 PYGB (ENSMODG00000006424) #27 ABHD12 (ENSMODG00000006439) #28 ENSMODG00000006443 #29 ENSMODG00000006490 #31 NANP (ENSMODG00000006495) #32 POLR1B (ENSMODG00000006573) TTL (ENSMODG00000006593) ENSMODG00000006599 ZC3H6 (ENSMODG00000006612) ENSMODG00000023144 FBLN7 (ENSMODG00000006624) Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00940000163249 #13 ENSGT00940000154755.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.a ENSGT00940000156844.b Diprotodontia ANCESTRAL SPECIES 2 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00940000163249 #13 ENSGT00940000154755.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.a ENSGT00940000156844.b Wallaby MODERN SPECIES 158 ENSMEUG00000011940 #22 Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000156819.a.a ENSGT00940000163276 ENSGT00940000156996 ENSGT00870000136554 ENSGT00390000005826.a.b #7 ENSGT00940000163249 #13 ENSGT00940000154755.b #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000003094 #32 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.a ENSGT00940000156844.b koala MODERN SPECIES 1 NKX2-2 (ENSPCIG00000034162) PAX1 (ENSPCIG00000031385) FOXA2 (ENSPCIG00000025918) SSTR4 (ENSPCIG00000015498) ENSPCIG00000015494 CD93 (ENSPCIG00000015492) ENSPCIG00000013801 ENSPCIG00000013803 ENSPCIG00000031294 NAPB (ENSPCIG00000013805) #7 ENSPCIG00000013809 ENSPCIG00000013810 #13 ENSPCIG00000036306 #17 ENSPCIG00000008654 SYNDIG1 (ENSPCIG00000008651) #20 CST7 (ENSPCIG00000035164) #22 APMAP (ENSPCIG00000025164) #23 ACSS1 (ENSPCIG00000025166) #24 VSX1 (ENSPCIG00000025170) #25 ENSPCIG00000025179 #26 ENSPCIG00000033046 #26 PYGB (ENSPCIG00000025185) #27 ABHD12 (ENSPCIG00000025187) #28 GINS1 (ENSPCIG00000029725) #29 ENSPCIG00000029727 #31 NANP (ENSPCIG00000029737) #32 POLR1B (ENSPCIG00000029738) TTL (ENSPCIG00000029739) ENSPCIG00000029740 ZC3H6 (ENSPCIG00000029741) FBLN7 (ENSPCIG00000007356) Common wonbat MODERN SPECIES 643 ENSVURG00010016294 ENSVURG00010016283 ENSVURG00010016278 NAPB (ENSVURG00010016267) #7 ENSVURG00010016209 #13 ENSVURG00010016205 #17 SYNDIG1 (ENSVURG00010016200) #20 ENSVURG00010016191 #22 APMAP (ENSVURG00010016178) #23 ACSS1 (ENSVURG00010016164) #24 VSX1 (ENSVURG00010016151) #25 ENTPD6 (ENSVURG00010016131) #26 PYGB (ENSVURG00010016120) #27 ENSVURG00010016106 ABHD12 (ENSVURG00010016096) #28 GINS1 (ENSVURG00010016088) #29 ENSVURG00010016050 #31 NANP (ENSVURG00010016036) #32 POLR1B (ENSVURG00010015997) TTL (ENSVURG00010015989) ZC3H6 (ENSVURG00010015983) FBLN7 (ENSVURG00010015970) TMEM87B (ENSVURG00010015937) Tasmanian devil MODERN SPECIES 1 RALGAPA2 (ENSSHAG00000011234) KIZ (ENSSHAG00000027601) XRN2 (ENSSHAG00000023603) NKX2-4 (ENSSHAG00000024664) NKX2-2 (ENSSHAG00000004915) PAX1 (ENSSHAG00000017556) FOXA2 (ENSSHAG00000014905) SSTR4 (ENSSHAG00000012685) THBD (ENSSHAG00000028423) CD93 (ENSSHAG00000031195) ENSSHAG00000009367 NAPB (ENSSHAG00000022875) #7 ENSSHAG00000031598 #17 ENSSHAG00000032132 #17 SYNDIG1 (ENSSHAG00000026100) #20 ENSSHAG00000000722 #22 APMAP (ENSSHAG00000002616) #23 ACSS1 (ENSSHAG00000004290) #24 ENSSHAG00000031963 VSX1 (ENSSHAG00000027598) #25 ENTPD6 (ENSSHAG00000017761) #26 PYGB (ENSSHAG00000017620) #27 ABHD12 (ENSSHAG00000017466) #28 GINS1 (ENSSHAG00000017422) #29 ENSSHAG00000017247 #31 ENSSHAG00000029018 #32 ENSSHAG00000028288 ENSSHAG00000020736 ZC3H6 (ENSSHAG00000016634) FBLN7 (ENSSHAG00000015919) TMEM87B (ENSSHAG00000015710) Platypus MODERN SPECIES ENSOANG00000002851 XRN2 (ENSOANG00000015673) NKX2-4 (ENSOANG00000048651) ENSOANG00000047729 PAX1 (ENSOANG00000002008) FOXA2 (ENSOANG00000015108) SSTR4 (ENSOANG00000037977) ENSOANG00000015171 ENSOANG00000041257 ENSOANG00000022376 GZF1 (ENSOANG00000038746) ENSOANG00000045902 NAPB (ENSOANG00000000251) #7 ENSOANG00000051113 #17 SYNDIG1 (ENSOANG00000010870) #20 CST7 (ENSOANG00000042962) #22 ENSOANG00000007840 OSR1 (ENSOANG00000045764) NT5C1B (ENSOANG00000007019) RDH14 (ENSOANG00000049985) KCNS3 (ENSOANG00000014360) ENSOANG00000002187 ENSOANG00000039008 ENSOANG00000010714 VSNL1 (ENSOANG00000040965) CYRIA (ENSOANG00000050664) MYCN (ENSOANG00000042652) DDX1 (ENSOANG00000005450) NBAS (ENSOANG00000004483) LRATD1 (ENSOANG00000007163) TRIB2 (ENSOANG00000001757) Sauria ANCESTRAL SPECIES 1 ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000014861 ENSGT00390000009679 ENSGT00390000000549 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000162003 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00940000167342 ENSGT00910000144115.b ENSGT00390000006712 Lepidosauria ANCESTRAL SPECIES 99 ENSGT00940000160277 #22 ENSGT00940000156986 ENSGT00550000074618.a.b ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00410000029064 ENSGT00390000011749 ENSGT00940000159617 ENSGT00390000017890 ENSGT01030000234564.a.a.b.b ENSGT00940000157066 ENSGT00390000006975 ENSGT00940000162544 ENSGT00940000158928 ENSGT00530000063205.B Episquamata ANCESTRAL SPECIES 6 ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT00940000162270.b ENSGT00950000182907.a.b.b.a ENSGT00940000155598 ENSGT00940000159937 ENSGT00390000013344 ENSGT00940000162158 ENSGT00940000156806 ENSGT00940000153558.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00940000160277 #22 ENSGT00940000156986 ENSGT00550000074618.a.b ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00410000029064 ENSGT00390000011749 ENSGT00940000159617 ENSGT00390000017890 ENSGT01030000234564.a.a.b.b ENSGT00940000157066 ENSGT00390000006975 ENSGT00940000162544 ENSGT00940000158928 ENSGT00530000063205.B Laterata ANCESTRAL SPECIES 7 ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT00940000162270.b ENSGT00950000182907.a.b.b.a ENSGT00940000155598 ENSGT00940000159937 ENSGT00390000013344 ENSGT00940000162158 ENSGT00940000156806 ENSGT00940000153558.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00940000160277 #22 ENSGT00940000156986 ENSGT00550000074618.a.b ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00410000029064 ENSGT00390000011749 ENSGT00940000159617 ENSGT00390000017890 ENSGT01030000234564.a.a.b.b ENSGT00940000157066 ENSGT00390000006975 ENSGT00940000164512 ENSGT00940000158928 ENSGT00530000063205.B Common wall lizard MODERN SPECIES 8 TDRD7 (ENSPMRG00000021504) B4GALT1 (ENSPMRG00000021574) SMU1 (ENSPMRG00000021580) DNAJA1 (ENSPMRG00000021589) ENSPMRG00000021595 ACTL7A (ENSPMRG00000021600) ELP1 (ENSPMRG00000021610) TBC1D2 (ENSPMRG00000021634) CORO2A (ENSPMRG00000021651) ANP32B (ENSPMRG00000021659) FOXE1 (ENSPMRG00000021665) XPA (ENSPMRG00000021668) NCBP1 (ENSPMRG00000021685) TSTD2 (ENSPMRG00000021727) TMOD1 (ENSPMRG00000021731) CST7 (ENSPMRG00000021743) #22 ENSPMRG00000021746 PPP2CB (ENSPMRG00000021756) ENSPMRG00000021764 PURG (ENSPMRG00000021771) WRN (ENSPMRG00000021798) GTF2E2 (ENSPMRG00000021872) SMIM18 (ENSPMRG00000021876) RBPMS (ENSPMRG00000021878) ENSPMRG00000021888 DCTN6 (ENSPMRG00000021890) MBOAT4 (ENSPMRG00000021902) PRAG1 (ENSPMRG00000021917) CLDN23 (ENSPMRG00000021935) MFHAS1 (ENSPMRG00000018275) PPP1R3B (ENSPMRG00000018280) Argentine black and white tegu MODERN SPECIES 99 ENSSMRG00000018714 DNAH6 (ENSSMRG00000018702) ENSSMRG00000018700 PIGG (ENSSMRG00000018698) GAK (ENSSMRG00000018696) SMU1 (ENSSMRG00000018695) B4GALT1 (ENSSMRG00000018694) ENSSMRG00000018692 #22 GSR (ENSSMRG00000018691) PPP2CB (ENSSMRG00000018689) ENSSMRG00000018687 PURG (ENSSMRG00000018686) WRN (ENSSMRG00000018682) SMIM18 (ENSSMRG00000018680) GTF2E2 (ENSSMRG00000018679) RBPMS (ENSSMRG00000018678) DCTN6 (ENSSMRG00000018677) MBOAT4 (ENSSMRG00000018676) PRAG1 (ENSSMRG00000018675) CLDN23 (ENSSMRG00000018672) ENSSMRG00000018670 Toxicofera ANCESTRAL SPECIES 6 ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT00940000162270.b ENSGT00950000182907.a.b.b.a ENSGT00940000155598 ENSGT00940000159937 ENSGT00390000013344 ENSGT00940000162158 ENSGT00940000156806 ENSGT00940000153558.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00940000160277 #22 ENSGT00940000156986 ENSGT00550000074618.a.b ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00410000029064 ENSGT00390000011749 ENSGT00940000159617 ENSGT00390000017890 ENSGT01030000234564.a.a.b.b ENSGT00940000157066 ENSGT00390000006975 ENSGT00940000162544 ENSGT00940000158928 ENSGT00530000063205.B Elapidae ANCESTRAL SPECIES 7 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733.e ENSGT00390000001733.f ENSGT00390000002721 ENSGT00940000162270.b ENSGT00950000182907.a.b.b.a ENSGT00940000155598 ENSGT00940000159937 ENSGT00390000013344 ENSGT00940000162158 ENSGT00940000156806 ENSGT00940000153558.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00940000160277 #22 ENSGT00940000156986 ENSGT00550000074618.a.b ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00410000029064 ENSGT00390000011749 ENSGT00940000159617 ENSGT00390000017890 ENSGT00940000157066.f ENSGT00390000006975 ENSGT00940000162544 ENSGT00940000158928 ENSGT00530000063205.B ENSGT00940000159475 Elapidae_a ANCESTRAL SPECIES 49 ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733.f ENSGT00390000002721 ENSGT00940000162270.b ENSGT00950000182907.a.b.b.a ENSGT00940000155598 ENSGT00940000159937 ENSGT00390000013344 ENSGT00940000162158 ENSGT00940000156806 ENSGT00940000153558.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00940000160277 #22 ENSGT00940000156986 ENSGT00550000074618.a.b.ib ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00410000029064 ENSGT00390000011749 ENSGT00940000159617 ENSGT00390000017890 ENSGT00940000157066.f ENSGT00390000006975 ENSGT00940000162544 ENSGT00940000158928 ENSGT00530000063205.B ENSGT00940000159475 Acanthophiinae ANCESTRAL SPECIES 49 ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733.f ENSGT00390000002721 ENSGT00940000162270.b ENSGT00950000182907.a.b.b.a ENSGT00940000155598 ENSGT00940000159937 ENSGT00390000013344 ENSGT00940000162158 ENSGT00940000156806 ENSGT00940000153558.b ENSGT00940000155007 ENSGT00940000155244 ENSGT00940000160277 #22 ENSGT00940000156986 ENSGT00550000074618.a.b.ib ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00410000029064 ENSGT00390000011749 ENSGT00940000159617 ENSGT00390000017890 ENSGT00940000157066.f ENSGT00390000006975 ENSGT00940000158928 ENSGT00530000063205.B ENSGT00940000159475 ENSGT00940000156161.B Eastern brown snake MODERN SPECIES 55 TMOD1 (ENSPTXG00000005161) TSTD2 (ENSPTXG00000005160) NCBP1 (ENSPTXG00000005159) XPA (ENSPTXG00000005158) FOXE1 (ENSPTXG00000005157) ANP32B (ENSPTXG00000012272) CORO2A (ENSPTXG00000012192) ENSPTXG00000012191 TBC1D2 (ENSPTXG00000012190) ELP1 (ENSPTXG00000012085) ACTL7A (ENSPTXG00000012084) APTX (ENSPTXG00000012082) DNAJA1 (ENSPTXG00000012081) SMU1 (ENSPTXG00000012078) B4GALT1 (ENSPTXG00000012076) ENSPTXG00000012074 #22 GSR (ENSPTXG00000012072) PPP2CB (ENSPTXG00000012070) ENSPTXG00000012068 PURG (ENSPTXG00000012066) WRN (ENSPTXG00000012058) SMIM18 (ENSPTXG00000012052) GTF2E2 (ENSPTXG00000012049) RBPMS (ENSPTXG00000012046) DCTN6 (ENSPTXG00000012044) PRAG1 (ENSPTXG00000012041) CLDN23 (ENSPTXG00000012040) MFHAS1 (ENSPTXG00000012039) ERI1 (ENSPTXG00000012037) PPP1R3B (ENSPTXG00000012036) TNKS (ENSPTXG00000012035) Mainland tiger snake MODERN SPECIES 48 TMOD1 (ENSNSUG00000015395) ENSNSUG00000015394 ENSNSUG00000015390 ENSNSUG00000015389 ENSNSUG00000015388 FOXE1 (ENSNSUG00000015387) ANP32B (ENSNSUG00000015385) CORO2A (ENSNSUG00000015313) TBC1D2 (ENSNSUG00000015306) ELP1 (ENSNSUG00000015305) ACTL7A (ENSNSUG00000015303) APTX (ENSNSUG00000015297) DNAJA1 (ENSNSUG00000015296) SMU1 (ENSNSUG00000015295) B4GALT1 (ENSNSUG00000015294) ENSNSUG00000015293 #22 GSR (ENSNSUG00000015292) ENSNSUG00000015291 ENSNSUG00000015290 PURG (ENSNSUG00000015289) WRN (ENSNSUG00000015288) SMIM18 (ENSNSUG00000015287) GTF2E2 (ENSNSUG00000015286) RBPMS (ENSNSUG00000015285) DCTN6 (ENSNSUG00000015284) PRAG1 (ENSNSUG00000015283) ENSNSUG00000015282 CLDN23 (ENSNSUG00000015281) MFHAS1 (ENSNSUG00000015280) ERI1 (ENSNSUG00000015207) PPP1R3B (ENSNSUG00000015206) Indian cobra MODERN SPECIES 1 TMOD1 (ENSNNAG00000015248) TSTD2 (ENSNNAG00000015153) ENSNNAG00000015072 ENSNNAG00000014908 XPA (ENSNNAG00000014875) ENSNNAG00000014860 ANP32B (ENSNNAG00000014843) CORO2A (ENSNNAG00000014807) TBC1D2 (ENSNNAG00000014756) ELP1 (ENSNNAG00000013979) ACTL7A (ENSNNAG00000013863) APTX (ENSNNAG00000013852) DNAJA1 (ENSNNAG00000013831) SMU1 (ENSNNAG00000013774) B4GALT1 (ENSNNAG00000013755) CST7 (ENSNNAG00000013744) #22 GSR (ENSNNAG00000013720) PPP2CB (ENSNNAG00000013698) ENSNNAG00000013670 PURG (ENSNNAG00000013661) WRN (ENSNNAG00000013524) SMIM18 (ENSNNAG00000013511) GTF2E2 (ENSNNAG00000013490) RBPMS (ENSNNAG00000013465) DCTN6 (ENSNNAG00000013448) PRAG1 (ENSNNAG00000013413) ENSNNAG00000013381 MFHAS1 (ENSNNAG00000013373) ERI1 (ENSNNAG00000013281) PPP1R3B (ENSNNAG00000013254) TNKS (ENSNNAG00000012885) tuatara MODERN SPECIES 1946 CST7 (ENSSPUG00000012771) #22 GSR (ENSSPUG00000012778) PPP2CB (ENSSPUG00000012793) Archelosauria ANCESTRAL SPECIES 1 ENSGT00390000006916.c ENSGT00390000014861 ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000162003 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00910000144115.b ENSGT00390000006712 ENSGT00940000156883 Archosauria ANCESTRAL SPECIES 45 ENSGT00390000006916.c ENSGT00390000014861 ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000162003 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 Aves ANCESTRAL SPECIES 50 ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000164409 ENSGT00940000161907 ENSGT00950000183132.B ENSGT01030000235681 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 Neognathae ANCESTRAL SPECIES 2 ENSGT00940000154292.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000161907 ENSGT00950000183132.B ENSGT00960000189642 ENSGT01030000235681 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 Galloanserae ANCESTRAL SPECIES 2 ENSGT00940000154292.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000161907 ENSGT00950000183132.B ENSGT00960000189642 ENSGT01030000235681 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 Phasianidae ANCESTRAL SPECIES 3 ENSGT00940000157824 ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000161907 ENSGT00950000183132.B ENSGT00960000189642 ENSGT01030000235681 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00940000154987 ENSGT00390000001878 Japanese quail MODERN SPECIES 21 FAM161A (ENSCJPG00005004102) DTD1 (ENSCJPG00005004103) SEC23B (ENSCJPG00005004104) POLR3F (ENSCJPG00005004105) DZANK1 (ENSCJPG00005004118) BIRC5 (ENSCJPG00005004120) KAT14 (ENSCJPG00005004121) PET117 (ENSCJPG00005004122) OVOL2 (ENSCJPG00005004123) MGME1 (ENSCJPG00005004124) SNX5 (ENSCJPG00005004126) RRBP1 (ENSCJPG00005004133) DSTN (ENSCJPG00005004178) ENSCJPG00005004180 #17 SYNDIG1 (ENSCJPG00005004183) #20 CST7 (ENSCJPG00005004184) #22 APMAP (ENSCJPG00005004185) #23 ACSS1 (ENSCJPG00005004186) #24 TTBK1 (ENSCJPG00005004189) SLC22A7 (ENSCJPG00005004194) TTL (ENSCJPG00005004195) POLR1B (ENSCJPG00005004197) ENSCJPG00005004198 ENSCJPG00005004200 CNPY3 (ENSCJPG00005004201) GNMT (ENSCJPG00005004203) PEX6 (ENSCJPG00005004207) VSX1 (ENSCJPG00005004210) #25 ENTPD6 (ENSCJPG00005004212) #26 MAL (ENSCJPG00005004213) MRPS5 (ENSCJPG00005004215) Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00550000074956 ENSGT00940000157824 ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000161907 ENSGT00950000183132.B ENSGT00960000189642 ENSGT01030000235681 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00940000154987 ENSGT00390000001878 Turkey MODERN SPECIES 11 ENSMGAG00000007154 #26 ENSMGAG00000007182 ENSMGAG00000007201 ENSMGAG00000007153 #25 ENSMGAG00000021674 ENSMGAG00000007129 CNPY3 (ENSMGAG00000020377) ENSMGAG00000017570 ENSMGAG00000019512 ENSMGAG00000007074 ENSMGAG00000007066 ENSMGAG00000007027 ENSMGAG00000007002 ENSMGAG00000018891 ACSS1 (ENSMGAG00000006966) #24 ENSMGAG00000006944 #22 ENSMGAG00000006955 #23 SYNDIG1 (ENSMGAG00000006942) #20 ENSMGAG00000006932 #17 ENSMGAG00000006909 ENSMGAG00000018889 ENSMGAG00000006816 ENSMGAG00000006777 ENSMGAG00000006770 ENSMGAG00000006748 ENSMGAG00000006755 ENSMGAG00000019251 ENSMGAG00000006691 ENSMGAG00000006709 SEC23B (ENSMGAG00000006640) ENSMGAG00000006620 Chicken MODERN SPECIES 22 CCT4 (ENSGALG00010018527) FAM161A (ENSGALG00010018530) DTD1 (ENSGALG00010018552) SEC23B (ENSGALG00010018573) POLR3F (ENSGALG00010018588) DZANK1 (ENSGALG00010018606) KAT14 (ENSGALG00010018631) BIRC5 (ENSGALG00010018655) OVOL2 (ENSGALG00010018668) MGME1 (ENSGALG00010018694) SNX5 (ENSGALG00010018709) RRBP1 (ENSGALG00010018724) DSTN (ENSGALG00010018786) CST3 (ENSGALG00010018815) #17 SYNDIG1 (ENSGALG00010018855) #20 CST7 (ENSGALG00010018877) #22 APMAP (ENSGALG00010018892) #23 ACSS1A (ENSGALG00010018899) #24 TTBK1 (ENSGALG00010018909) SLC22A7 (ENSGALG00010018926) TTL (ENSGALG00010018950) POLR1B (ENSGALG00010018971) ENSGALG00010018993 CNPY3 (ENSGALG00010019024) GNMT (ENSGALG00010019032) PEX6 (ENSGALG00010019042) VSX1 (ENSGALG00010016860) #25 ENTPD6 (ENSGALG00010016873) #26 MAL (ENSGALG00010016892) MRPS5 (ENSGALG00010016909) SLC8A1 (ENSGALG00010016941) Anatidae ANCESTRAL SPECIES 11 ENSGT00940000154292.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000161907 ENSGT00950000183132.B ENSGT00960000189642 ENSGT01030000235681 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 Pink-footed goose MODERN SPECIES 162 ENSABRG00000018846 DTD1 (ENSABRG00000018850) SEC23B (ENSABRG00000018852) POLR3F (ENSABRG00000018859) DZANK1 (ENSABRG00000018870) BIRC5 (ENSABRG00000018893) KAT14 (ENSABRG00000018902) PET117 (ENSABRG00000018909) OVOL2 (ENSABRG00000018913) MGME1 (ENSABRG00000018922) SNX5 (ENSABRG00000018924) RRBP1 (ENSABRG00000018934) DSTN (ENSABRG00000018963) ENSABRG00000000681 #17 SYNDIG1 (ENSABRG00000000692) #20 CST7 (ENSABRG00000000736) #22 APMAP (ENSABRG00000000752) #23 ACSS1 (ENSABRG00000000844) #24 TTBK1 (ENSABRG00000000874) SLC22A7 (ENSABRG00000000993) TTL (ENSABRG00000001801) POLR1B (ENSABRG00000001813) ENSABRG00000001906 ENSABRG00000001921 CNPY3 (ENSABRG00000001963) GNMT (ENSABRG00000001990) PEX6 (ENSABRG00000002015) VSX1 (ENSABRG00000002064) #25 ENTPD6 (ENSABRG00000002075) #26 PYGB (ENSABRG00000002095) #27 ABHD12 (ENSABRG00000002156) #28 Duck MODERN SPECIES 21 NRXN1 (ENSAPLG00000003929) DTD1 (ENSAPLG00000004266) ENSAPLG00000029844 SEC23B (ENSAPLG00000004406) POLR3F (ENSAPLG00000005533) DZANK1 (ENSAPLG00000005843) KAT14 (ENSAPLG00000016172) PET117 (ENSAPLG00000029005) OVOL2 (ENSAPLG00000016199) MGME1 (ENSAPLG00000016203) SNX5 (ENSAPLG00000016284) RRBP1 (ENSAPLG00000000581) DSTN (ENSAPLG00000023943) ENSAPLG00000002886 #17 SYNDIG1 (ENSAPLG00000002971) #20 CST7 (ENSAPLG00000003056) #22 APMAP (ENSAPLG00000003059) #23 ACSS1 (ENSAPLG00000003258) #24 TTBK1 (ENSAPLG00000003737) SLC22A7 (ENSAPLG00000003838) TTL (ENSAPLG00000004001) POLR1B (ENSAPLG00000004142) ENSAPLG00000019490 ENSAPLG00000026092 CNPY3 (ENSAPLG00000017921) GNMT (ENSAPLG00000020041) PEX6 (ENSAPLG00000014569) VSX1 (ENSAPLG00000014568) #25 ENTPD6 (ENSAPLG00000013990) #26 PYGB (ENSAPLG00000010355) #27 ENSAPLG00000021989 Neognathae_b ANCESTRAL SPECIES 1 ENSGT00940000154292.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000161907 ENSGT00950000183132.B ENSGT00960000189642 ENSGT01030000235681 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 Passeriformes ANCESTRAL SPECIES 2 ENSGT00940000154292.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000153394.c.a.g.b.c.b ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000161907 ENSGT00950000183132.B ENSGT01030000235681 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00940000154292.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000153394.c.a.g.b.c.b Passeriformes_g ANCESTRAL SPECIES 45 ENSGT00940000154292.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 Passeroidea ANCESTRAL SPECIES 34 ENSGT00940000153431.b ENSGT00960000190962 ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000160148 ENSGT00390000016400 ENSGT00390000007214 ENSGT00950000182843.a.a.a.b.a.a ENSGT00940000154857.i.a ENSGT00940000156852 ENSGT00940000164908 ENSGT00940000158656 ENSGT00950000182899.A ENSGT00940000156426 ENSGT00940000155428 ENSGT00940000160301 ENSGT00390000018717.b.a.a ENSGT00940000155666.c Common canary MODERN SPECIES 23 DTD1 (ENSSCAG00000012086) ENSSCAG00000012091 SEC23B (ENSSCAG00000012095) POLR3F (ENSSCAG00000012106) DZANK1 (ENSSCAG00000012121) BIRC5 (ENSSCAG00000012163) KAT14 (ENSSCAG00000012168) ENSSCAG00000012175 OVOL2 (ENSSCAG00000012177) MGME1 (ENSSCAG00000012184) SNX5 (ENSSCAG00000012191) RRBP1 (ENSSCAG00000012207) DSTN (ENSSCAG00000012226) CST3 (ENSSCAG00000012232) #17 SYNDIG1 (ENSSCAG00000012241) #20 CST7 (ENSSCAG00000012245) #22 APMAP (ENSSCAG00000012246) #23 ENSSCAG00000012251 JAG1 (ENSSCAG00000012364) SLX4IP (ENSSCAG00000012680) MKKS (ENSSCAG00000012683) SNAP25 (ENSSCAG00000012685) ENSSCAG00000012688 ANKEF1 (ENSSCAG00000012690) ENSSCAG00000012696 PAK5 (ENSSCAG00000012709) LAMP5 (ENSSCAG00000012713) PLCB4 (ENSSCAG00000012730) PLCB1 (ENSSCAG00000012853) TMX4 (ENSSCAG00000013460) HAO1 (ENSSCAG00000013465) Zebra finch MODERN SPECIES 23 DTD1 (ENSTGUG00000005772) ENSTGUG00000029617 SEC23B (ENSTGUG00000005787) POLR3F (ENSTGUG00000005839) DZANK1 (ENSTGUG00000005864) BIRC5 (ENSTGUG00000005891) KAT14 (ENSTGUG00000005899) PET117 (ENSTGUG00000027932) OVOL2 (ENSTGUG00000005909) MGME1 (ENSTGUG00000005912) SNX5 (ENSTGUG00000005916) RRBP1 (ENSTGUG00000005958) DSTN (ENSTGUG00000005998) ENSTGUG00000006006 #17 SYNDIG1 (ENSTGUG00000006051) #20 CST7 (ENSTGUG00000006040) #22 APMAP (ENSTGUG00000027797) #23 JAG1 (ENSTGUG00000006079) SLX4IP (ENSTGUG00000020657) SNAP25 (ENSTGUG00000006133) MKKS (ENSTGUG00000006126) ENSTGUG00000006159 ANKEF1 (ENSTGUG00000006163) ENSTGUG00000006175 PAK5 (ENSTGUG00000006182) LAMP5 (ENSTGUG00000006211) PLCB4 (ENSTGUG00000006214) PLCB1 (ENSTGUG00000006294) TMX4 (ENSTGUG00000019958) HAO1 (ENSTGUG00000006420) BMP2 (ENSTGUG00000018981) Medium ground finch MODERN SPECIES 108 FSHR (ENSGFOG00000004366) NRXN1 (ENSGFOG00000004075) DTD1 (ENSGFOG00000003463) SEC23B (ENSGFOG00000003379) POLR3F (ENSGFOG00000003349) DZANK1 (ENSGFOG00000003297) KAT14 (ENSGFOG00000003273) OVOL2 (ENSGFOG00000003259) MGME1 (ENSGFOG00000003246) ENSGFOG00000003230 ENSGFOG00000003221 RRBP1 (ENSGFOG00000003113) DSTN (ENSGFOG00000003071) CST3 (ENSGFOG00000002991) #17 SYNDIG1 (ENSGFOG00000002974) #20 CST7 (ENSGFOG00000002907) #22 APMAP (ENSGFOG00000002861) #23 Flycatcher MODERN SPECIES 388 ENSFALG00000000561 #22 ENSFALG00000000562 #23 ENSFALG00000000566 Great tit MODERN SPECIES 22 ENSPMJG00000004278 DTD1 (ENSPMJG00000004259) SEC23B (ENSPMJG00000004234) POLR3F (ENSPMJG00000004232) DZANK1 (ENSPMJG00000004216) ENSPMJG00000004213 KAT14 (ENSPMJG00000004207) ENSPMJG00000004206 OVOL2 (ENSPMJG00000004201) MGME1 (ENSPMJG00000004199) SNX5 (ENSPMJG00000004188) RRBP1 (ENSPMJG00000004155) DSTN (ENSPMJG00000004137) CST3 (ENSPMJG00000004135) #17 SYNDIG1 (ENSPMJG00000004131) #20 CST7 (ENSPMJG00000004127) #22 APMAP (ENSPMJG00000004115) #23 ENSPMJG00000004112 ACSS1 (ENSPMJG00000004093) #24 TTBK1 (ENSPMJG00000004070) SLC22A7 (ENSPMJG00000004061) TTL (ENSPMJG00000004059) POLR1B (ENSPMJG00000004049) CNPY3 (ENSPMJG00000004045) GNMT (ENSPMJG00000004041) PEX6 (ENSPMJG00000003613) VSX1 (ENSPMJG00000003604) #25 ENTPD6 (ENSPMJG00000003519) #26 PYGB (ENSPMJG00000003513) #27 ABHD12 (ENSPMJG00000003511) #28 PPP2R5D (ENSPMJG00000003503) Neognathae_c ANCESTRAL SPECIES 5 ENSGT00940000154292.a.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000009679 ENSGT00390000000549 ENSGT00510000047537 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.c.a.b ENSGT00940000154755 #17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160981 ENSGT00940000154922.b ENSGT00940000161907 ENSGT00950000183132.B ENSGT00960000189642 ENSGT00390000014072.A ENSGT00390000006845 ENSGT00550000074953 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT01030000234620.a.a.a.b Kakapo MODERN SPECIES 2 FSHR (ENSSHBG00005015407) NRXN1 (ENSSHBG00005015393) DTD1 (ENSSHBG00005015380) SEC23B (ENSSHBG00005015365) POLR3F (ENSSHBG00005015359) DZANK1 (ENSSHBG00005015352) BIRC5 (ENSSHBG00005015346) KAT14 (ENSSHBG00005015339) OVOL2 (ENSSHBG00005015243) MGME1 (ENSSHBG00005015217) SNX5 (ENSSHBG00005015201) RRBP1 (ENSSHBG00005015114) DSTN (ENSSHBG00005015085) CST3 (ENSSHBG00005015078) #17 SYNDIG1 (ENSSHBG00005015073) #20 ENSSHBG00005015067 #22 APMAP (ENSSHBG00005015055) #23 ACSS1 (ENSSHBG00005015044) #24 ENSSHBG00005015031 ENSSHBG00005015020 SLC22A7 (ENSSHBG00005014751) TTL (ENSSHBG00005014709) POLR1B (ENSSHBG00005014677) ENSSHBG00005014660 CNPY3 (ENSSHBG00005014649) GNMT (ENSSHBG00005014634) PEX6 (ENSSHBG00005014622) VSX1 (ENSSHBG00005014605) #25 ENTPD6 (ENSSHBG00005014587) #26 PYGB (ENSSHBG00005014572) #27 ABHD12 (ENSSHBG00005014558) #28 Golden eagle MODERN SPECIES 4 ENSACCG00020015633 DTD1 (ENSACCG00020015615) SEC23B (ENSACCG00020015586) POLR3F (ENSACCG00020015559) DZANK1 (ENSACCG00020015517) BIRC5 (ENSACCG00020015492) PET117 (ENSACCG00020015481) OVOL2 (ENSACCG00020015449) MGME1 (ENSACCG00020015431) SNX5 (ENSACCG00020015410) RRBP1 (ENSACCG00020015379) DSTN (ENSACCG00020015353) ENSACCG00020015327 #17 SYNDIG1 (ENSACCG00020015314) #20 ENSACCG00020015264 CST7 (ENSACCG00020015242) #22 APMAP (ENSACCG00020015223) #23 ACSS1 (ENSACCG00020015208) #24 TTBK1 (ENSACCG00020015163) SLC22A7 (ENSACCG00020014967) TTL (ENSACCG00020014852) POLR1B (ENSACCG00020014830) ENSACCG00020014814 CNPY3 (ENSACCG00020014796) GNMT (ENSACCG00020014780) PEX6 (ENSACCG00020014720) VSX1 (ENSACCG00020014652) #25 ENTPD6 (ENSACCG00020014639) #26 PYGB (ENSACCG00020014616) #27 ABHD12 (ENSACCG00020014596) #28 PPP2R5D (ENSACCG00020014544) African ostrich MODERN SPECIES 545 DTD1 (ENSSCUG00000006614) SEC23B (ENSSCUG00000006617) ENSSCUG00000006620 POLR3F (ENSSCUG00000006621) DZANK1 (ENSSCUG00000006625) KAT14 (ENSSCUG00000006639) ENSSCUG00000006645 OVOL2 (ENSSCUG00000005969) MGME1 (ENSSCUG00000005971) SNX5 (ENSSCUG00000005974) ENSSCUG00000005979 RRBP1 (ENSSCUG00000005982) DSTN (ENSSCUG00000005986) ENSSCUG00000005988 SYNDIG1 (ENSSCUG00000005991) #20 CST7 (ENSSCUG00000005994) #22 APMAP (ENSSCUG00000005995) #23 ACSS1 (ENSSCUG00000005997) #24 TTBK1 (ENSSCUG00000006000) SLC22A7 (ENSSCUG00000006007) ENSSCUG00000006008 POLR1B (ENSSCUG00000006010) CNPY3 (ENSSCUG00000006014) PEX6 (ENSSCUG00000006017) ENTPD6 (ENSSCUG00000006019) #26 PYGB (ENSSCUG00000006027) #27 ABHD12 (ENSSCUG00000006046) #28 ENSSCUG00000006050 PPP2R5D (ENSSCUG00000006053) KLHDC3 (ENSSCUG00000006056) ENSSCUG00000006060 Australian saltwater crocodile MODERN SPECIES 49 POLR3F (ENSCPRG00005010171) ENSCPRG00005010167 ENSCPRG00005010153 BIRC5 (ENSCPRG00005010149) KAT14 (ENSCPRG00005010142) OVOL2 (ENSCPRG00005010125) MGME1 (ENSCPRG00005010120) SNX5 (ENSCPRG00005010114) BANF2 (ENSCPRG00005010100) ENSCPRG00005010096 DSTN (ENSCPRG00005010095) CST3 (ENSCPRG00005010089) #17 ENSCPRG00005010060 ENSCPRG00005010035 SYNDIG1 (ENSCPRG00005010018) #20 CST7 (ENSCPRG00005009970) #22 APMAP (ENSCPRG00005009961) #23 ACSS1 (ENSCPRG00005009895) #24 Cryptodira ANCESTRAL SPECIES 44 ENSGT00390000006845 ENSGT00390000014072.A ENSGT00390000007712 ENSGT01050000246678 ENSGT00950000183132.B ENSGT00940000174607 ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.a ENSGT00940000155669 ENSGT00390000016757 ENSGT00390000003178 ENSGT00940000157865 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00910000144115.b ENSGT00390000006712 ENSGT00940000154987 Testudinoidea ANCESTRAL SPECIES ENSGT00390000006845 ENSGT00390000014072.A ENSGT00390000007712 ENSGT01050000246678 ENSGT00950000183132.B ENSGT00940000174607 ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.a ENSGT00940000155669 ENSGT00390000016757 ENSGT00390000003178 ENSGT00940000157865 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00910000144115.b ENSGT00390000006712 ENSGT00940000154987 Emydidae ANCESTRAL SPECIES 41 ENSGT00550000074953 ENSGT00390000006845 ENSGT00390000014072.A ENSGT00390000007712 ENSGT01050000246678 ENSGT00950000183132.B ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.a ENSGT00940000155669 ENSGT00390000016757 ENSGT00390000003178 ENSGT00940000157865.c ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00910000144115.b ENSGT00390000006712 ENSGT00940000154987 painted turtle MODERN SPECIES 5 PEX6 (ENSCPBG00000003712) ENSCPBG00000003801 CNPY3 (ENSCPBG00000003850) PTCRA (ENSCPBG00000003864) ENSCPBG00000003872 POLR1B (ENSCPBG00000003962) TTL (ENSCPBG00000005366) ENSCPBG00000005376 ZC3H6 (ENSCPBG00000005397) FBLN7 (ENSCPBG00000005399) MERTK (ENSCPBG00000005405) ANAPC1 (ENSCPBG00000005698) BCL2L11 (ENSCPBG00000011370) BUB1 (ENSCPBG00000011374) SYNDIG1 (ENSCPBG00000011377) #20 CST7 (ENSCPBG00000011380) #22 APMAP (ENSCPBG00000011383) #23 ACSS1 (ENSCPBG00000011394) #24 VSX1 (ENSCPBG00000011431) #25 ENTPD6 (ENSCPBG00000011433) #26 PYGB (ENSCPBG00000011542) #27 ABHD12 (ENSCPBG00000017703) #28 GINS1 (ENSCPBG00000017709) #29 NINL (ENSCPBG00000017716) #31 EIF4A3 (ENSCPBG00000017801) ENSCPBG00000018235 ENSCPBG00000018238 HNRNPLL (ENSCPBG00000018241) GALM (ENSCPBG00000018244) ENSCPBG00000018247 GEMIN6 (ENSCPBG00000018250) Three-toed box turtle MODERN SPECIES 62 MEA1 (ENSTMTG00000011628) PPP2R5D (ENSTMTG00000005756) PEX6 (ENSTMTG00000005321) GNMT (ENSTMTG00000005292) CNPY3 (ENSTMTG00000005267) ENSTMTG00000005253 POLR1B (ENSTMTG00000005224) TTL (ENSTMTG00000005176) ZC3H6 (ENSTMTG00000005139) FBLN7 (ENSTMTG00000005106) MERTK (ENSTMTG00000005058) ANAPC1 (ENSTMTG00000003726) BCL2L11 (ENSTMTG00000003561) ENSTMTG00000003535 ENSTMTG00000003504 CST7 (ENSTMTG00000003477) #22 APMAP (ENSTMTG00000003454) #23 Testudinidae ANCESTRAL SPECIES 6 ENSGT00550000074953 ENSGT00390000006845 ENSGT00390000014072.A ENSGT00390000007712 ENSGT00950000183132.B ENSGT00940000174607 ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 ENSGT00830000128368.a ENSGT00940000155669 ENSGT00390000016757 ENSGT00390000003178 ENSGT00940000157865 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00910000144115.b ENSGT00390000006712 ENSGT00940000154987 Abingdon island giant tortoise MODERN SPECIES 2768 POLR1B (ENSCABG00000021006) TTL (ENSCABG00000021011) ENSCABG00000021015 ZC3H6 (ENSCABG00000021021) FBLN7 (ENSCABG00000021032) MERTK (ENSCABG00000021043) ANAPC1 (ENSCABG00000021156) BCL2L11 (ENSCABG00000021538) ENSCABG00000021543 SYNDIG1 (ENSCABG00000021549) #20 CST7 (ENSCABG00000021555) #22 APMAP (ENSCABG00000021556) #23 ACSS1 (ENSCABG00000021558) #24 VSX1 (ENSCABG00000021560) #25 ENSCABG00000021561 ENTPD6 (ENSCABG00000021562) #26 PYGB (ENSCABG00000021563) #27 ABHD12 (ENSCABG00000021565) #28 GINS1 (ENSCABG00000021566) #29 Goode s thornscrub tortoise MODERN SPECIES 17 PEX6 (ENSGEVG00005000855) GNMT (ENSGEVG00005000921) CNPY3 (ENSGEVG00005000945) PTCRA (ENSGEVG00005000965) POLR1B (ENSGEVG00005000990) ENSGEVG00005001024 TTL (ENSGEVG00005001040) ENSGEVG00005001063 ENSGEVG00005001086 FBLN7 (ENSGEVG00005001135) MERTK (ENSGEVG00005001258) ANAPC1 (ENSGEVG00005001428) BCL2L11 (ENSGEVG00005001613) BUB1 (ENSGEVG00005001651) SYNDIG1 (ENSGEVG00005001668) #20 CST7 (ENSGEVG00005001688) #22 APMAP (ENSGEVG00005001706) #23 ACSS1 (ENSGEVG00005002009) #24 VSX1 (ENSGEVG00005002580) #25 ENTPD6 (ENSGEVG00005002605) #26 PYGB (ENSGEVG00005002634) #27 ABHD12 (ENSGEVG00005002658) #28 GINS1 (ENSGEVG00005002675) #29 ENSGEVG00005002687 #31 EIF4A3 (ENSGEVG00005002704) ATL2 (ENSGEVG00005002734) HNRNPLL (ENSGEVG00005002755) GALM (ENSGEVG00005002771) ENSGEVG00005002799 GEMIN6 (ENSGEVG00005002833) SRSF7 (ENSGEVG00005002844) Chinese turtle MODERN SPECIES 2159 CST7 (ENSPSIG00000003306) #22 APMAP (ENSPSIG00000003311) #23 ACSS1 (ENSPSIG00000003383) #24 VSX1 (ENSPSIG00000003555) #25 ENTPD6 (ENSPSIG00000003558) #26 ABHD12 (ENSPSIG00000003644) #28 GINS1 (ENSPSIG00000003690) #29 Anura ANCESTRAL SPECIES 74 ENSGT00390000014861 ENSGT00390000009679 ENSGT00390000000549 ENSGT00390000001146 ENSGT00520000059926 ENSGT00940000159359 ENSGT00390000003349 ENSGT00940000154632 ENSGT00940000158015 ENSGT00950000183000.d ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000160517 #28 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT00390000003094 #32 ENSGT00940000161907 ENSGT01030000234543.E ENSGT00940000157396 Frog MODERN SPECIES 5 nphp1 (ENSXETG00000022446) MTLN (ENSXETG00000038810) ENSXETG00000026160 bub1 (ENSXETG00000022448) ENSXETG00000046549 ENSXETG00000048386 acoxl (ENSXETG00000003017) ENSXETG00000044981 bcl2l11 (ENSXETG00000042001) dstn (ENSXETG00000046480) XB990108 [provisional] (ENSXETG00000003015) #17 ENSXETG00000041627 #17 ENSXETG00000044385 ENSXETG00000044537 #17 syndig1 (ENSXETG00000034502) #20 cst7 (ENSXETG00000012775) #22 apmap (ENSXETG00000012776) #26 vsx1 (ENSXETG00000012786) #25 acss1 (ENSXETG00000012777) #24 baf-l (ENSXETG00000027034) pygm (ENSXETG00000012788) #27 abhd12 (ENSXETG00000012789) #28 uqcc2 (ENSXETG00000048018) gins1 (ENSXETG00000027032) #29 ninl (ENSXETG00000034469) #31 ENSXETG00000036497 eif4a3.1 (ENSXETG00000013720) atl2 (ENSXETG00000013737) polr1b (ENSXETG00000013749) nanp (ENSXETG00000024902) #32 ttl (ENSXETG00000013760) Leishan spiny toad MODERN SPECIES 7 OVOL2 (ENSLLEG00000007827) KAT14 (ENSLLEG00000007861) PET117 (ENSLLEG00000007944) DZANK1 (ENSLLEG00000007962) POLR3F (ENSLLEG00000008030) RBBP9 (ENSLLEG00000008150) ENSLLEG00000008209 RRBP1 (ENSLLEG00000008455) ENSLLEG00000009810 ENSLLEG00000009876 #17 ENSLLEG00000010035 ENSLLEG00000010057 SYNDIG1 (ENSLLEG00000010136) #20 ENSLLEG00000010174 ENSLLEG00000010185 CST7 (ENSLLEG00000010202) #22 APMAP (ENSLLEG00000010291) #23 ACSS1 (ENSLLEG00000010430) #24 VSX1 (ENSLLEG00000010522) #25 ENTPD6 (ENSLLEG00000010609) #26 ENSLLEG00000010721 PYGB (ENSLLEG00000010829) #27 ABHD12 (ENSLLEG00000011886) #28 GINS1 (ENSLLEG00000012005) #29 NINL (ENSLLEG00000012086) #31 EIF4A3 (ENSLLEG00000012431) ENSLLEG00000012799 ENSLLEG00000012813 ATL2 (ENSLLEG00000012905) CRNKL1 (ENSLLEG00000013452) ENSLLEG00000013641 Coelacanth MODERN SPECIES 1372 ENSLACG00000012458 SYNDIG1 (ENSLACG00000010979) #20 CST7 (ENSLACG00000002690) #22 APMAP (ENSLACG00000001082) #23 Actinopterygii ANCESTRAL SPECIES 109 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000155037 ENSGT00940000155710 ENSGT01030000234642.a.b.b.d.a ENSGT00510000047589 ENSGT00910000144115.b ENSGT00390000006712 Neopterygii ANCESTRAL SPECIES 290 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000153954 Osteoglossocephalai ANCESTRAL SPECIES 96 ENSGT00570000079239 ENSGT00390000013448.a.a ENSGT00390000002970 ENSGT00950000183100.B ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.a ENSGT00940000155061.a.b.k.b ENSGT00940000154551.b ENSGT00940000155139 ENSGT00940000154518.b Osteoglossiformes ANCESTRAL SPECIES 46 ENSGT00570000079239 ENSGT00390000013448.a.a ENSGT00390000002970 ENSGT00950000183100.B ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT01100000263520.a.a.a.a.b.b.b.b ENSGT00940000157865 ENSGT00440000037341.a ENSGT00940000158843 ENSGT00940000155823.B ENSGT00500000044929 ENSGT00940000156126 ENSGT00940000153168.B ENSGT00510000047676 ENSGT00940000165200 ENSGT00390000017746 ENSGT00940000157593 ENSGT00700000104522 ENSGT00940000165789 P. kingsleyae MODERN SPECIES 188 nvl (ENSPKIG00000009967) degs1 (ENSPKIG00000009914) fbxo28 (ENSPKIG00000009895) polr1c (ENSPKIG00000009858) yipf3 (ENSPKIG00000009819) LRRC73 (ENSPKIG00000009786) ENSPKIG00000009733 DLK2 (ENSPKIG00000009706) dnph1 (ENSPKIG00000009695) mea1 (ENSPKIG00000009678) ppp2r5d (ENSPKIG00000009600) ENSPKIG00000009562 ENSPKIG00000009537 CUL7 (ENSPKIG00000009345) SYNDIG1 (ENSPKIG00000009263) #20 ENSPKIG00000009194 #22 apmap (ENSPKIG00000009133) #23 ENSPKIG00000009111 ENSPKIG00000009072 FAM98A (ENSPKIG00000009038) rasgrp3 (ENSPKIG00000008983) ENSPKIG00000008935 zswim8 (ENSPKIG00000008737) ENSPKIG00000008627 chchd1 (ENSPKIG00000008612) hk1 (ENSPKIG00000008533) ENSPKIG00000008489 tspan15 (ENSPKIG00000008464) rufy2 (ENSPKIG00000008428) HNRNPH3 (ENSPKIG00000008373) pbld (ENSPKIG00000008337) Asian bonytongue MODERN SPECIES 23 degs1 (ENSSFOG00015026332) fbxo28 (ENSSFOG00015032127) polr1c (ENSSFOG00015019860) yipf3 (ENSSFOG00015019808) LRRC73 (ENSSFOG00015019790) ENSSFOG00015019742 DLK2 (ENSSFOG00015033158) dnph1 (ENSSFOG00015019717) mea1 (ENSSFOG00015027564) ppp2r5d (ENSSFOG00015019640) ENSSFOG00015019616 ENSSFOG00015019586 CUL7 (ENSSFOG00015019507) ENSSFOG00015024873 SYNDIG1 (ENSSFOG00015031745) #20 ENSSFOG00015019486 #22 apmap (ENSSFOG00015019473) #23 ENSSFOG00015019461 ENSSFOG00015019432 FAM98A (ENSSFOG00015019413) rasgrp3 (ENSSFOG00015019278) LTBP1 (ENSSFOG00015019222) ttc27 (ENSSFOG00015019117) BIRC6 (ENSSFOG00015018871) yipf4 (ENSSFOG00015018831) exo1 (ENSSFOG00015018815) ENSSFOG00015027835 PDZD8 (ENSSFOG00015032885) slc18a2 (ENSSFOG00015018629) ENSSFOG00015018603 ENSSFOG00015018571 Clupeocephala ANCESTRAL SPECIES 89 ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT01030000234576.D.a.a.b.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000003133 ENSGT00390000000854.c.b Euteleosteomorpha ANCESTRAL SPECIES 33 ENSGT00940000155310.a.b ENSGT01030000234576.D.a.a.b.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000003133 Acanthomorphata ANCESTRAL SPECIES 93 ENSGT00910000144630.a ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT01010000222287.B.a.a.a.a.a.a ENSGT00940000155989.e ENSGT00940000153956.a.b ENSGT00940000155896.k Euacanthomorphacea ANCESTRAL SPECIES 60 ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00440000033965 ENSGT01100000263502.B.a.a.d.b.c.a ENSGT00940000154877.B ENSGT00940000156225 Percomorphaceae ANCESTRAL SPECIES 45 ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00950000183175.A.c ENSGT01030000234633.C.a ENSGT00940000155571.A ENSGT00440000033965 Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 Ovalentaria ANCESTRAL SPECIES 18 ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000154411 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 Atherinomorphae ANCESTRAL SPECIES 41 ENSGT01030000236263 ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT01040000241272 ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000157776.d ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 Cyprinodontiformes ANCESTRAL SPECIES 37 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000159658.a.a ENSGT00940000178738 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B #20 ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01040000241272 ENSGT01030000234620.a.a.a.b Cyprinodontoidei ANCESTRAL SPECIES 40 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000159658.a.a ENSGT00940000178738 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B #20 ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01040000241272 ENSGT01030000234620.a.a.a.b Poeciliinae ANCESTRAL SPECIES 36 ENSGT00940000166655 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B #20 ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 Poecilia ANCESTRAL SPECIES 59 ENSGT00940000166655 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B #20 ENSGT00940000153954.qb.a ENSGT00940000153954.qb.b ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b Guppy MODERN SPECIES 445 ENSPREG00000013870 ENSPREG00000013852 ENSPREG00000013824 tspan14 (ENSPREG00000013816) ENSPREG00000013811 ENSPREG00000013796 #22 apmap (ENSPREG00000013778) #23 dnph1 (ENSPREG00000013768) yipf3 (ENSPREG00000013751) ncoa4 (ENSPREG00000013735) ENSPREG00000013726 ENSPREG00000013710 ENSPREG00000013695 ENSPREG00000013668 prph2b (ENSPREG00000013649) ENSPREG00000013633 #20 ENSPREG00000013619 ENSPREG00000013602 ENSPREG00000013579 ENSPREG00000013569 ENSPREG00000013514 NAME_6 ANCESTRAL SPECIES 205 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B #20 ENSGT00940000153954.qb.a ENSGT00940000153954.qb.b ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b Sailfin molly MODERN SPECIES 1101 GRIN3B (ENSPLAG00000009227) ENSPLAG00000009259 PLPPR3 (ENSPLAG00000009266) ENSPLAG00000009275 #22 apmap (ENSPLAG00000009398) #23 med16 (ENSPLAG00000009418) ENSPLAG00000000211 palm1a (ENSPLAG00000009671) MAP1S (ENSPLAG00000009696) trmt13 (ENSPLAG00000009709) lrrc39 (ENSPLAG00000009732) dbt (ENSPLAG00000009742) ENSPLAG00000009756 nrd1b (ENSPLAG00000009784) Amazon molly MODERN SPECIES 930 ENSPFOG00000005999 #22 apmap (ENSPFOG00000005885) #23 dnph1 (ENSPFOG00000005821) yipf3 (ENSPFOG00000005709) ncoa4 (ENSPFOG00000005630) ENSPFOG00000005622 ENSPFOG00000023281 prkn (ENSPFOG00000005450) ENSPFOG00000005389 UBR2 (ENSPFOG00000003667) prph2b (ENSPFOG00000003489) ENSPFOG00000003479 #20 ENSPFOG00000003358 ENSPFOG00000003324 Platyfish MODERN SPECIES 14 ENSXMAG00000017068 ADGRA1 (ENSXMAG00000007574) KNDC1 (ENSXMAG00000007589) vox (ENSXMAG00000007597) ENSXMAG00000019828 dntt (ENSXMAG00000007601) blnk (ENSXMAG00000025725) CCNJ (ENSXMAG00000007625) ENSXMAG00000025492 cpeb3 (ENSXMAG00000007652) marchf5 (ENSXMAG00000007675) ENSXMAG00000009019 ENSXMAG00000009048 EML4 (ENSXMAG00000009050) tspan14 (ENSXMAG00000009071) ENSXMAG00000009082 #22 apmap (ENSXMAG00000009084) #23 dnph1 (ENSXMAG00000025860) ENSXMAG00000028806 yipf3 (ENSXMAG00000022186) ENSXMAG00000023212 ncoa4 (ENSXMAG00000002456) ENSXMAG00000024034 ENSXMAG00000025345 ENSXMAG00000027850 ENSXMAG00000028741 ENSXMAG00000028431 prkn (ENSXMAG00000003878) ENSXMAG00000021413 UBR2 (ENSXMAG00000016386) ENSXMAG00000029313 NAME_4 ANCESTRAL SPECIES 245 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000159658.a.a ENSGT00940000178738 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00390000011034 ENSGT00910000144630.a ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000153954 ENSGT00940000168290 Mummichog MODERN SPECIES 1678 ENSFHEG00000010458 #22 apmap (ENSFHEG00000010451) #23 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000160277 #22 Turquoise killifish MODERN SPECIES 22 ENSNFUG00015015528 prkn (ENSNFUG00015015478) ENSNFUG00015015464 ENSNFUG00015015457 ncoa4 (ENSNFUG00015015451) yipf3 (ENSNFUG00015015244) DNPH1 (ENSNFUG00015015168) apmap (ENSNFUG00015015131) #23 ENSNFUG00015015126 KCNG3 (ENSNFUG00015015114) ENSNFUG00015015107 #22 tspan14 (ENSNFUG00015015088) ENSNFUG00015015070 Oryzias ANCESTRAL SPECIES 6 ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT01040000241272 ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582.h ENSGT00390000003133 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT01050000244965.a.b ENSGT00390000018613.a ENSGT00390000016929 ENSGT00950000183165.b.a.e.b.d.b ENSGT00950000183165.b.a.e.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 Oryzias_b ANCESTRAL SPECIES 7 ENSGT00390000011034 ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT01040000241272 ENSGT00390000000614 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582.g.a ENSGT00390000003133 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT01050000244965.a.b ENSGT00390000018613.a ENSGT00390000016929 ENSGT00950000183165.b.a.e.b.d.b ENSGT00950000183165.b.a.e.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 Indian medaka MODERN SPECIES 27 prkn (ENSOMEG00000021728) ENSOMEG00000021741 ncoa4 (ENSOMEG00000021751) yipf3 (ENSOMEG00000021759) dnph1 (ENSOMEG00000021767) ENSOMEG00000021792 DLK2 (ENSOMEG00000021843) LRRC73 (ENSOMEG00000021865) mea1 (ENSOMEG00000021885) ppp2r5d (ENSOMEG00000021899) ENSOMEG00000021912 ENSOMEG00000021957 ENSOMEG00000022031 CUL7 (ENSOMEG00000022216) SYNDIG1 (ENSOMEG00000022278) #20 CST7 (ENSOMEG00000022297) #22 apmap (ENSOMEG00000022324) #23 vsx1 (ENSOMEG00000022331) #25 entpd6 (ENSOMEG00000022360) #26 ENSOMEG00000022382 shld2 (ENSOMEG00000022412) nfkb2 (ENSOMEG00000022445) PSD (ENSOMEG00000022477) elovl6l (ENSOMEG00000022491) ENSOMEG00000000593 gtf3c3 (ENSOMEG00000022536) ENSOMEG00000022517 ENSOMEG00000022557 pygb (ENSOMEG00000022587) #27 abhd12 (ENSOMEG00000022600) gins1 (ENSOMEG00000022610) #29 Javanese ricefish MODERN SPECIES 6 prph2b (ENSOJAG00000009923) ENSOJAG00000009844 prkn (ENSOJAG00000009769) ENSOJAG00000009756 ncoa4 (ENSOJAG00000009677) yipf3 (ENSOJAG00000009663) dnph1 (ENSOJAG00000009647) ENSOJAG00000009635 ENSOJAG00000009601 LRRC73 (ENSOJAG00000009578) mea1 (ENSOJAG00000009565) ppp2r5d (ENSOJAG00000009323) ENSOJAG00000009253 ENSOJAG00000009229 SYNDIG1 (ENSOJAG00000007544) #20 CST7 (ENSOJAG00000007531) #22 apmap (ENSOJAG00000007500) #23 ENSOJAG00000007489 ENSOJAG00000007450 vsx1 (ENSOJAG00000007405) #25 AIFM2 (ENSOJAG00000007164) AIFM2 (ENSOJAG00000007118) ENSOJAG00000007075 ENSOJAG00000007025 ENSOJAG00000006208 elovl6l (ENSOJAG00000005897) ENSOJAG00000005845 gtf3c3 (ENSOJAG00000005810) ENSOJAG00000005793 ENSOJAG00000005788 ENSOJAG00000005779 Oryzias_a ANCESTRAL SPECIES 4 ENSGT00950000183075.a.a.a.a ENSGT00910000144630.a ENSGT00390000011034 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582.h ENSGT00390000003133 ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT01050000244965.a.b ENSGT00390000018613.a ENSGT00390000016929 ENSGT00950000183165.b.a.e.b.d.b ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 Japanese Medaka HdrR MODERN SPECIES 6 ncoa4 (ENSORLG00000003269) yipf3 (ENSORLG00000003250) ENSORLG00000029764 ENSORLG00000026021 dnph1 (ENSORLG00000003216) ENSORLG00000003209 ENSORLG00000003193 LRRC73 (ENSORLG00000003187) mea1 (ENSORLG00000003180) ppp2r5d (ENSORLG00000003171) ENSORLG00000026208 ENSORLG00000003131 ENSORLG00000023888 CUL7 (ENSORLG00000003116) SYNDIG1 (ENSORLG00000003047) #20 CST7 (ENSORLG00000024898) #22 apmap (ENSORLG00000003030) #23 vsx1 (ENSORLG00000002999) #25 entpd6 (ENSORLG00000002995) #26 AIFM2 (ENSORLG00000002975) ENSORLG00000027267 ENSORLG00000022188 shld2 (ENSORLG00000002947) nfkb2 (ENSORLG00000002942) ENSORLG00000023409 ENSORLG00000002919 ELOVL6 (ENSORLG00000002876) ENSORLG00000024716 gtf3c3 (ENSORLG00000002865) ENSORLG00000002858 pygb (ENSORLG00000002852) #27 Chinese medaka MODERN SPECIES 5319 ENSOSIG00000014903 #22 apmap (ENSOSIG00000014906) #23 entpd6 (ENSOSIG00000014928) #26 shld2 (ENSOSIG00000001621) nfkb2 (ENSOSIG00000001673) ENSOSIG00000002201 elovl6l (ENSOSIG00000007962) ENSOSIG00000007963 gtf3c3 (ENSOSIG00000007965) ENSOSIG00000008181 abhd12 (ENSOSIG00000008458) gins1 (ENSOSIG00000008504) #29 sncga (ENSOSIG00000008511) ENSOSIG00000008517 prorsd1 (ENSOSIG00000008625) OPN4 (ENSOSIG00000008626) Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00940000167655 ENSGT01050000244965.a.b ENSGT00390000004582 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000166409 ENSGT00950000183148.b.b #27 ENSGT00390000018613.a ENSGT00650000094737 ENSGT00940000155061.a.b.k.a Cichlidae ANCESTRAL SPECIES 38 ENSGT00910000144630.a ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b Pseudocrenilabrinae ANCESTRAL SPECIES 32 ENSGT00910000144630.a ENSGT00390000011034 ENSGT00940000181480 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00910000144630.a ENSGT00390000011034 ENSGT00940000181480 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 ENSGT00390000000854.c.b Haplochromini ANCESTRAL SPECIES 10 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00390000004989.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00390000005029 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b.k ENSGT00390000000614 ENSGT00940000172797 ENSGT00940000170622 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00390000004989.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b Haplochromini_B ANCESTRAL SPECIES 5 ENSGT00490000044642.a.a.a.a.a.a.d.a.b.b.d.b.d.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b.k ENSGT00390000000614 ENSGT00940000172797 ENSGT00940000170622 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000004582 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000166409 ENSGT00390000018613.a ENSGT01050000244965.a.b ENSGT00390000004989.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b Eastern happy MODERN SPECIES 4 ncoa4 (ENSACLG00000004547) yipf3 (ENSACLG00000004518) dnph1 (ENSACLG00000004498) ENSACLG00000004450 ENSACLG00000004316 ENSACLG00000004297 LRRC73 (ENSACLG00000004272) mea1 (ENSACLG00000004254) ppp2r5d (ENSACLG00000004203) ENSACLG00000004195 ENSACLG00000004157 ENSACLG00000004135 ENSACLG00000004118 ENSACLG00000004108 SYNDIG1 (ENSACLG00000004089) #20 CST7 (ENSACLG00000004075) #22 apmap (ENSACLG00000004058) #23 acss1 (ENSACLG00000003692) #24 ENSACLG00000003679 vsx1 (ENSACLG00000003666) #25 entpd6 (ENSACLG00000003640) #26 AIFM2 (ENSACLG00000003628) ninl (ENSACLG00000003579) #31 gins1 (ENSACLG00000003544) #29 abhd12 (ENSACLG00000003503) ENSACLG00000003493 elovl6l (ENSACLG00000003479) ENSACLG00000003473 PSD (ENSACLG00000003404) nfkb2 (ENSACLG00000003145) glud1a (ENSACLG00000003101) Zebra mbuna MODERN SPECIES 1095 ENSMZEG00005002175 ncoa4 (ENSMZEG00005002183) yipf3 (ENSMZEG00005002205) dnph1 (ENSMZEG00005002254) ENSMZEG00005002273 ENSMZEG00005002281 LRRC73 (ENSMZEG00005002318) mea1 (ENSMZEG00005002338) ppp2r5d (ENSMZEG00005002344) ENSMZEG00005002385 ENSMZEG00005002401 CUL7 (ENSMZEG00005002437) SYNDIG1 (ENSMZEG00005002508) #20 ENSMZEG00005002540 #22 apmap (ENSMZEG00005002551) #23 ENSMZEG00005002581 ENSMZEG00005002604 ENSMZEG00005002638 SPTBN1 (ENSMZEG00005002647) ENSMZEG00005002725 ACYP2 (ENSMZEG00005002734) ENSMZEG00005002746 slc30a6 (ENSMZEG00005002761) ENSMZEG00005002814 sult6b1 (ENSMZEG00005002834) ZNF365 (ENSMZEG00005002841) adob (ENSMZEG00005002847) EGR2 (ENSMZEG00005002857) kif11 (ENSMZEG00005002879) P. nyererei MODERN SPECIES 815 ENSPNYG00000012481 ENSPNYG00000012444 ENSPNYG00000012420 SYNDIG1 (ENSPNYG00000012395) #20 CST7 (ENSPNYG00000012302) #22 apmap (ENSPNYG00000012258) #23 acss1 (ENSPNYG00000012208) #24 ENSPNYG00000012188 vsx1 (ENSPNYG00000012173) #25 entpd6 (ENSPNYG00000012105) #26 Burton s mouthbrooder MODERN SPECIES 634 mea1 (ENSHBUG00000007901) ppp2r5d (ENSHBUG00000008425) ENSHBUG00000008453 ENSHBUG00000008468 ENSHBUG00000008650 ENSHBUG00000008671 SYNDIG1 (ENSHBUG00000000218) #20 CST7 (ENSHBUG00000008713) #22 apmap (ENSHBUG00000008722) #23 acss1 (ENSHBUG00000008753) #24 ENSHBUG00000000731 vsx1 (ENSHBUG00000008796) #25 entpd6 (ENSHBUG00000008823) #26 AIFM2 (ENSHBUG00000008835) ninl (ENSHBUG00000008912) #31 gins1 (ENSHBUG00000008965) #29 ENSHBUG00000008980 ENSHBUG00000008987 elovl6l (ENSHBUG00000009011) ENSHBUG00000009024 ENSHBUG00000009118 nfkb2 (ENSHBUG00000009148) glud1a (ENSHBUG00000009198) Nile tilapia MODERN SPECIES 4 prkn (ENSONIG00000007137) ENSONIG00000007133 ENSONIG00000038915 ncoa4 (ENSONIG00000007129) yipf3 (ENSONIG00000007123) ENSONIG00000038571 ENSONIG00000007118 ENSONIG00000007116 LRRC73 (ENSONIG00000007112) mea1 (ENSONIG00000039258) ppp2r5d (ENSONIG00000007102) ENSONIG00000039687 ENSONIG00000025397 CUL7 (ENSONIG00000007097) SYNDIG1 (ENSONIG00000007096) #20 CST7 (ENSONIG00000007095) #22 apmap (ENSONIG00000007089) #23 ENSONIG00000030606 acss1 (ENSONIG00000007083) #24 ENSONIG00000007088 vsx1 (ENSONIG00000007081) #25 entpd6 (ENSONIG00000028512) #26 AIFM2 (ENSONIG00000007065) gins1 (ENSONIG00000007057) #29 abhd12 (ENSONIG00000007055) ENSONIG00000001767 ENSONIG00000041954 elovl6l (ENSONIG00000007039) ENSONIG00000007035 nfkb2 (ENSONIG00000007023) glud1a (ENSONIG00000007014) Midas cichlid MODERN SPECIES 9 QKI (ENSACIG00000004082) ncoa4 (ENSACIG00000003970) yipf3 (ENSACIG00000003945) dnph1 (ENSACIG00000003905) ENSACIG00000003876 ENSACIG00000003848 LRRC73 (ENSACIG00000003832) mea1 (ENSACIG00000003821) ppp2r5d (ENSACIG00000003769) ENSACIG00000003759 ENSACIG00000003738 ENSACIG00000003653 ENSACIG00000003621 SYNDIG1 (ENSACIG00000003603) #20 CST7 (ENSACIG00000003585) #22 apmap (ENSACIG00000003569) #23 acss1 (ENSACIG00000003543) #24 ENSACIG00000003515 vsx1 (ENSACIG00000003497) #25 entpd6 (ENSACIG00000003387) #26 AIFM2 (ENSACIG00000003288) rps27a (ENSACIG00000003269) bmpr1aa (ENSACIG00000003249) ldb3a (ENSACIG00000003216) ENSACIG00000003204 OPN4 (ENSACIG00000003123) prorsd1 (ENSACIG00000003099) usp54a (ENSACIG00000003003) ENSACIG00000002956 sncga (ENSACIG00000002945) Pomacentridae ANCESTRAL SPECIES 308 ENSGT00440000039984.a #23 ENSGT00940000160277 #22 Pomacentridae_A ANCESTRAL SPECIES 135 ENSGT00940000154411 ENSGT00440000039984.a #23 ENSGT00940000160277 #22 ENSGT00950000183147.B #20 ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000011034 ENSGT00910000144630.a ENSGT00950000183075.a.a.a.a Amphiprion ANCESTRAL SPECIES 255 ENSGT00440000039984.a #23 ENSGT00940000160277 #22 ENSGT00950000183147.B #20 ENSGT00940000153954.lb ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A Clown anemonefish MODERN SPECIES 1754 ENSAOCG00000013147 ncoa4 (ENSAOCG00000013046) ENSAOCG00000012930 ENSAOCG00000012911 ENSAOCG00000012892 entpd6 (ENSAOCG00000012807) #26 vsx1 (ENSAOCG00000012782) #25 ENSAOCG00000000786 acss1 (ENSAOCG00000012711) #24 ENSAOCG00000012653 apmap (ENSAOCG00000012637) #23 ENSAOCG00000012612 #22 SYNDIG1 (ENSAOCG00000012602) #20 ENSAOCG00000012584 Spiny chromis MODERN SPECIES 1334 smpd4 (ENSAPOG00000017219) DOCK3 (ENSAPOG00000017103) ENSAPOG00000016903 apmap (ENSAPOG00000016896) #23 ENSAPOG00000016857 #22 SYNDIG1 (ENSAPOG00000016849) #20 Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 Percomorphaceae_D ANCESTRAL SPECIES 26 ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT01100000263507.E.a.a.a.a ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 Anabantaria ANCESTRAL SPECIES 38 ENSGT00910000144630.a ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT01100000263533.b.a.a.b ENSGT00940000154411 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 Zig-zag eel MODERN SPECIES 6 ENSMAMG00000028121 prkn (ENSMAMG00000022445) ENSMAMG00000027318 ENSMAMG00000026062 ncoa4 (ENSMAMG00000022452) yipf3 (ENSMAMG00000022454) ENSMAMG00000022460 ENSMAMG00000022464 ENSMAMG00000022467 ENSMAMG00000022469 mea1 (ENSMAMG00000022473) ppp2r5d (ENSMAMG00000022474) ENSMAMG00000022480 ENSMAMG00000022485 SYNDIG1 (ENSMAMG00000022489) #20 CST7 (ENSMAMG00000022492) #22 APMAP (ENSMAMG00000022493) #23 ENSMAMG00000022502 ACSS1 (ENSMAMG00000022509) #24 vsx1 (ENSMAMG00000022512) #25 ENTPD6 (ENSMAMG00000022517) #26 ENSMAMG00000027221 abhd12 (ENSMAMG00000022521) GINS1 (ENSMAMG00000022524) #29 glud1a (ENSMAMG00000022526) ENSMAMG00000022530 ENSMAMG00000022529 ENSMAMG00000022533 ENSMAMG00000022536 ENSMAMG00000022537 ENSMAMG00000022538 Anabantoidei ANCESTRAL SPECIES 35 ENSGT00940000157303.e ENSGT00950000183075.a.a.a.a ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT01100000263533.b.a.a.b ENSGT01100000263491.a.a.c.b ENSGT00940000154411 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00950000183175.A.c Climbing perch MODERN SPECIES 6 ENSATEG00000028192 ENSATEG00000022584 ncoa4 (ENSATEG00000022558) yipf3 (ENSATEG00000022524) ENSATEG00000022504 ENSATEG00000025538 ENSATEG00000022466 ENSATEG00000022427 ENSATEG00000022394 ENSATEG00000022373 mea1 (ENSATEG00000022363) ENSATEG00000022337 ENSATEG00000022319 ENSATEG00000022253 SYNDIG1 (ENSATEG00000022241) #20 CST7 (ENSATEG00000022225) #22 APMAP (ENSATEG00000022167) #23 ACSS1 (ENSATEG00000022038) #24 ENSATEG00000022064 VSX1 (ENSATEG00000021999) #25 gins1 (ENSATEG00000021979) #29 ENSATEG00000021937 #31 ENSATEG00000021922 ENSATEG00000021917 ENSATEG00000006825 ENSATEG00000021903 ENSATEG00000006772 ENSATEG00000021857 ENSATEG00000021842 ENSATEG00000021803 ENSATEG00000021794 Siamese fighting fish MODERN SPECIES 6 ENSBSLG00000021853 tspan14 (ENSBSLG00000021784) prph2b (ENSBSLG00000021704) prkn (ENSBSLG00000021447) ncoa4 (ENSBSLG00000021399) yipf3 (ENSBSLG00000021247) dnph1 (ENSBSLG00000021180) ENSBSLG00000021094 ENSBSLG00000020988 LRRC73 (ENSBSLG00000020944) mea1 (ENSBSLG00000020540) ppp2r5d (ENSBSLG00000019953) ENSBSLG00000019795 CUL7 (ENSBSLG00000019049) SYNDIG1 (ENSBSLG00000019001) #20 CST7 (ENSBSLG00000018971) #22 apmap (ENSBSLG00000018848) #23 ENSBSLG00000018771 acss1 (ENSBSLG00000017444) #24 ENSBSLG00000017229 vsx1 (ENSBSLG00000017100) #25 entpd6 (ENSBSLG00000016958) #26 ENSBSLG00000016939 ENSBSLG00000016803 gins1 (ENSBSLG00000016768) #29 ninl (ENSBSLG00000016626) #31 elovl6l (ENSBSLG00000016537) SNCG (ENSBSLG00000016529) shld2 (ENSBSLG00000016527) glud1a (ENSBSLG00000016486) nfkb2 (ENSBSLG00000016427) Carangaria ANCESTRAL SPECIES 33 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000154411 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b Carangaria_A ANCESTRAL SPECIES 76 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT01100000263507.E.a.a.a.a ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT01050000244965.a.b ENSGT00390000004582 ENSGT00660000095541.a.a #31 ENSGT00390000013968 #29 ENSGT00940000166409 Seriola ANCESTRAL SPECIES 98 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000157467.v ENSGT00940000154411 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT01030000234633.C.a ENSGT00950000183175.A.c ENSGT00390000003133 ENSGT00390000000854.c.b ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT00390000004582 Greater amberjack MODERN SPECIES 55 ENSSDUG00000005097 ENSSDUG00000004734 HTR7 (ENSSDUG00000004660) ARFGEF3 (ENSSDUG00000004588) yipf3 (ENSSDUG00000004560) dnph1 (ENSSDUG00000004542) ENSSDUG00000004501 ENSSDUG00000004452 LRRC73 (ENSSDUG00000004427) mea1 (ENSSDUG00000004418) ppp2r5d (ENSSDUG00000004373) ENSSDUG00000004358 ENSSDUG00000004331 CUL7 (ENSSDUG00000004222) SYNDIG1 (ENSSDUG00000004206) #20 CST7 (ENSSDUG00000004191) #22 apmap (ENSSDUG00000004176) #23 acss1 (ENSSDUG00000004130) #24 ENSSDUG00000004089 vsx1 (ENSSDUG00000004078) #25 entpd6 (ENSSDUG00000004060) #26 ENSSDUG00000004053 pygb (ENSSDUG00000003969) #27 ENSSDUG00000003935 sncga (ENSSDUG00000003901) shld2 (ENSSDUG00000003857) glud1a (ENSSDUG00000003818) nfkb2 (ENSSDUG00000003710) ENSSDUG00000003693 ENSSDUG00000003671 AIFM2 (ENSSDUG00000003663) Yellowtail amberjack MODERN SPECIES 3254 ENSSLDG00000017955 ENSSLDG00000017940 LRRC73 (ENSSLDG00000017925) mea1 (ENSSLDG00000017918) ppp2r5d (ENSSLDG00000017882) ENSSLDG00000017789 ENSSLDG00000017751 CUL7 (ENSSLDG00000017639) SYNDIG1 (ENSSLDG00000017584) #20 CST7 (ENSSLDG00000017575) #22 apmap (ENSSLDG00000017561) #23 ENSSLDG00000017553 ENSSLDG00000017546 ENSSLDG00000017537 acss1 (ENSSLDG00000017494) #24 vsx1 (ENSSLDG00000017478) #25 entpd6 (ENSSLDG00000017445) #26 ENSSLDG00000017435 pygb (ENSSLDG00000017394) #27 Barramundi perch MODERN SPECIES 554 ENSLCAG00010020621 SYNDIG1 (ENSLCAG00010020625) #20 CST7 (ENSLCAG00010020644) #22 apmap (ENSLCAG00010020667) #23 ENSLCAG00010020674 acss1 (ENSLCAG00010020694) #24 ENSLCAG00010020756 vsx1 (ENSLCAG00010020759) #25 entpd6 (ENSLCAG00010020762) #26 ENSLCAG00010020769 ENSLCAG00010020773 elovl6l (ENSLCAG00010020778) AIFM2 (ENSLCAG00010020782) ninl (ENSLCAG00010020789) #31 gins1 (ENSLCAG00010020802) #29 abhd12 (ENSLCAG00010020839) PSD (ENSLCAG00010020907) Pleuronectoidei ANCESTRAL SPECIES 73 ENSGT00940000159658.a.a ENSGT00390000011034 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00950000183175.A.c ENSGT00390000003133 Turbot MODERN SPECIES 6 ENSSMAG00000033407 ENSSMAG00000006576 ENSSMAG00000006759 ENSSMAG00000006806 ENSSMAG00000007047 ncoa4 (ENSSMAG00000007072) yipf3 (ENSSMAG00000007107) ENSSMAG00000007129 ENSSMAG00000007149 ENSSMAG00000007190 ENSSMAG00000007204 mea1 (ENSSMAG00000007230) ENSSMAG00000007248 ENSSMAG00000037461 ENSSMAG00000007361 #20 CST7 (ENSSMAG00000007379) #22 APMAP (ENSSMAG00000007388) #23 ACSS1 (ENSSMAG00000007425) #24 vsx1 (ENSSMAG00000007488) #25 ENTPD6 (ENSSMAG00000007560) #26 ENSSMAG00000007617 abhd12 (ENSSMAG00000007585) gins1 (ENSSMAG00000007654) #29 ENSSMAG00000007690 #31 ENSSMAG00000007740 ENSSMAG00000023273 ENSSMAG00000028253 ENSSMAG00000007765 ENSSMAG00000007832 ENSSMAG00000022976 ENSSMAG00000033224 Tongue sole MODERN SPECIES 3 SEMA4G (ENSCSEG00000004522) lzts2a (ENSCSEG00000004518) pdzd7a (ENSCSEG00000004504) sfxn3 (ENSCSEG00000004493) selenou1a (ENSCSEG00000004484) ENSCSEG00000004479 dnph1 (ENSCSEG00000004477) ENSCSEG00000004465 DLK2 (ENSCSEG00000004449) LRRC73 (ENSCSEG00000004438) mea1 (ENSCSEG00000004434) ppp2r5d (ENSCSEG00000004428) ENSCSEG00000004425 ENSCSEG00000004417 ENSCSEG00000004386 ENSCSEG00000004377 #22 apmap (ENSCSEG00000004354) #23 ENSCSEG00000004348 slc22a15 (ENSCSEG00000004341) ENSCSEG00000004329 cyp26c1 (ENSCSEG00000004291) ENSCSEG00000004282 ppp1r3ca (ENSCSEG00000004280) HECTD2 (ENSCSEG00000004270) ENSCSEG00000004265 pcgf5a (ENSCSEG00000004250) ANKRD1 (ENSCSEG00000004246) ENSCSEG00000004241 ENSCSEG00000004234 ENSCSEG00000004230 ENSCSEG00000004222 Eupercaria ANCESTRAL SPECIES 15 ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000156591 Tetraodontidae ANCESTRAL SPECIES 7 ENSGT00390000011034 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000156591 ENSGT00940000164992 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 9 prkn (ENSTNIG00000013388) UBR2 (ENSTNIG00000013387) prph2b (ENSTNIG00000013386) ENSTNIG00000013385 ncoa4 (ENSTNIG00000013384) yipf3 (ENSTNIG00000013383) dnph1 (ENSTNIG00000013382) ENSTNIG00000013381 DLK2 (ENSTNIG00000013380) LRRC73 (ENSTNIG00000013379) mea1 (ENSTNIG00000013378) ppp2r5d (ENSTNIG00000013377) ENSTNIG00000013376 ENSTNIG00000013375 CUL7 (ENSTNIG00000013374) CST7 (ENSTNIG00000013373) #22 apmap (ENSTNIG00000013372) #23 acss1 (ENSTNIG00000013371) #24 ENSTNIG00000013370 vsx1 (ENSTNIG00000013369) #25 entpd6 (ENSTNIG00000013368) #26 ENSTNIG00000013367 pygb (ENSTNIG00000013366) #27 abhd12 (ENSTNIG00000013365) gins1 (ENSTNIG00000013364) #29 ninl (ENSTNIG00000013363) #31 AIFM2 (ENSTNIG00000013362) elovl6l (ENSTNIG00000013361) PSD (ENSTNIG00000013360) nfkb2 (ENSTNIG00000013359) glud1a (ENSTNIG00000013358) Tetraodon MODERN SPECIES 26 cdk9 (ENSTNIG00000002426) NCK2 (ENSTNIG00000002429) ENSTNIG00000002430 ENSTNIG00000002431 socs4 (ENSTNIG00000018804) ENSTNIG00000002434 fam98b (ENSTNIG00000002436) ndrg2 (ENSTNIG00000002441) neurod4 (ENSTNIG00000002442) ENSTNIG00000002443 ENSTNIG00000002447 ENSTNIG00000001596 ENSTNIG00000002457 ARSD (ENSTNIG00000002458) ENSTNIG00000001271 ENSTNIG00000000880 #22 ENSTNIG00000002468 ENSTNIG00000002469 ENSTNIG00000002470 ENSTNIG00000002471 HCK (ENSTNIG00000002534) slc18a2 (ENSTNIG00000002535) PDZD8 (ENSTNIG00000000196) ATP8B1 (ENSTNIG00000002536) txnl1 (ENSTNIG00000002537) ENSTNIG00000002208 naif1 (ENSTNIG00000002538) TECTA (ENSTNIG00000002539) ENSTNIG00000002545 SYDE1 (ENSTNIG00000002546) ENSTNIG00000001261 Fugu MODERN SPECIES 16 prkn (ENSTRUG00000006244) UBR2 (ENSTRUG00000004807) prph2b (ENSTRUG00000004626) ENSTRUG00000024222 ncoa4 (ENSTRUG00000003924) yipf3 (ENSTRUG00000003502) dnph1 (ENSTRUG00000003415) ENSTRUG00000003134 ENSTRUG00000003130 LRRC73 (ENSTRUG00000003016) mea1 (ENSTRUG00000002736) ENSTRUG00000020191 ENSTRUG00000031439 CUL7 (ENSTRUG00000001875) SYNDIG1 (ENSTRUG00000003768) #20 CST7 (ENSTRUG00000027365) #22 apmap (ENSTRUG00000003885) #23 acss1 (ENSTRUG00000004153) #24 vsx1 (ENSTRUG00000004377) #25 entpd6 (ENSTRUG00000007946) #26 ENSTRUG00000030656 pygb (ENSTRUG00000006615) #27 abhd12 (ENSTRUG00000006368) gins1 (ENSTRUG00000006354) #29 ninl (ENSTRUG00000006138) #31 aifm2 (ENSTRUG00000028385) elovl6l (ENSTRUG00000031260) ENSTRUG00000029997 ENSTRUG00000005491 ENSTRUG00000029690 ENSTRUG00000029372 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 Ballan wrasse MODERN SPECIES 18 shtn1 (ENSLBEG00000027938) hspa12a (ENSLBEG00000027962) PNLIPRP2 (ENSLBEG00000028003) pitx3 (ENSLBEG00000028018) GBF1 (ENSLBEG00000028029) macroh2a2 (ENSLBEG00000028058) ENSLBEG00000028084 ENSLBEG00000028111 mea1 (ENSLBEG00000028116) ppp2r5d (ENSLBEG00000028133) ENSLBEG00000028150 ENSLBEG00000028162 CUL7 (ENSLBEG00000028182) SYNDIG1 (ENSLBEG00000028204) #20 ENSLBEG00000028229 CST7 (ENSLBEG00000028232) #22 apmap (ENSLBEG00000028238) #23 ENSLBEG00000028243 acss1 (ENSLBEG00000028252) #24 ENSLBEG00000028271 vsx1 (ENSLBEG00000028279) #25 entpd6 (ENSLBEG00000028292) #26 ENSLBEG00000028295 pygb (ENSLBEG00000028298) #27 abhd12 (ENSLBEG00000000009) gins1 (ENSLBEG00000000019) #29 ninl (ENSLBEG00000000021) #31 AIFM2 (ENSLBEG00000000024) elovl6l (ENSLBEG00000000028) ENSLBEG00000000033 nfkb2 (ENSLBEG00000000044) Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00950000183147.B #20 ENSGT00940000170622 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT01100000263520.a.a.b.a.a ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b Eupecaria_C ANCESTRAL SPECIES 49 ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000162367.f ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00950000183147.B #20 ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b ENSGT00390000003133 Gilthead seabream MODERN SPECIES 6 ENSSAUG00010025305 ENSSAUG00010025302 rps27a (ENSSAUG00010025299) bmpr1aa (ENSSAUG00010024902) ldb3a (ENSSAUG00010024880) ENSSAUG00010024873 OPN4 (ENSSAUG00010024872) prorsd1 (ENSSAUG00010024868) CUL7 (ENSSAUG00010023784) ENSSAUG00010023737 #22 apmap (ENSSAUG00010023735) #23 ENSSAUG00010023731 ENSSAUG00010023730 vsx1 (ENSSAUG00010023729) #25 ENSSAUG00010023728 ENSSAUG00010023727 acss1 (ENSSAUG00010023725) #24 gins1 (ENSSAUG00010023722) #29 ENSSAUG00010023720 ninl (ENSSAUG00010023719) #31 AIFM2 (ENSSAUG00010023717) elovl6l (ENSSAUG00010023715) ENSSAUG00010023712 PSD (ENSSAUG00010023468) nfkb2 (ENSSAUG00010023432) Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000160277 #22 Large yellow croaker MODERN SPECIES 27 UBR2 (ENSLCRG00005015223) prph2b (ENSLCRG00005017510) KCNG3 (ENSLCRG00005017511) tspan14 (ENSLCRG00005017512) EML4 (ENSLCRG00005017526) apmap (ENSLCRG00005018792) #23 ENSLCRG00005018794 ENSLCRG00005018795 acss1 (ENSLCRG00005018801) #24 vsx1 (ENSLCRG00005018882) #25 entpd6 (ENSLCRG00005018884) #26 ENSLCRG00005018886 gins1 (ENSLCRG00005018890) #29 abhd12 (ENSLCRG00005018902) ENSLCRG00005019017 ENSLCRG00005019019 #22 Perciformes ANCESTRAL SPECIES 17 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT01100000263520.a.a.b.a.a ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00650000094737 ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000000854.c.b Perciformes_a ANCESTRAL SPECIES 68 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT01100000263520.a.a.b.a.a ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00390000000854.c.b ENSGT00950000183175.A.c ENSGT01030000234633.C.a Pike perch MODERN SPECIES 399 CUL7 (ENSSLUG00000020618) ENSSLUG00000020569 SYNDIG1 (ENSSLUG00000020536) #20 ENSSLUG00000020527 ENSSLUG00000020522 ENSSLUG00000020519 CST7 (ENSSLUG00000020515) #22 apmap (ENSSLUG00000020509) #23 ENSSLUG00000020500 ENSSLUG00000020491 #24 Cottioidei ANCESTRAL SPECIES 59 ENSGT00950000183175.A.c ENSGT00390000003133 ENSGT00390000000854.c.b ENSGT00940000164992 ENSGT00940000155061.a.b.k.a ENSGT00650000094737 ENSGT01050000244965.a.b ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT01030000234576.D.a.a.b.b ENSGT00940000156207.b.c.a.b ENSGT00940000176919 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00940000170622 Lumpfish MODERN SPECIES 6 MTRF1L (ENSCLMG00005002392) fbxo5 (ENSCLMG00005002390) vip (ENSCLMG00005002389) ENSCLMG00005002348 SLC16A12 (ENSCLMG00005002346) ENSCLMG00005002344 zgc:65997 (ENSCLMG00005002342) ENSCLMG00005002339 ENSCLMG00005002332 ENSCLMG00005002331 ENSCLMG00005002330 PSD (ENSCLMG00005002327) GLUD2 (ENSCLMG00005002290) ENSCLMG00005002282 sncga (ENSCLMG00005002281) CST7 (ENSCLMG00005002279) #22 apmap (ENSCLMG00005002277) #23 ENSCLMG00005002274 ENSCLMG00005002273 ACSS1 (ENSCLMG00005002247) #24 ENSCLMG00005002223 vsx1 (ENSCLMG00005002206) #25 ENSCLMG00005002203 entpd6 (ENSCLMG00005002190) #26 ENSCLMG00005002189 abhd12 (ENSCLMG00005002188) gins1 (ENSCLMG00005002187) #29 ENSCLMG00005002006 PPP2R5D (ENSCLMG00005001730) mea1 (ENSCLMG00005001543) LRRC73 (ENSCLMG00005001519) Stickleback MODERN SPECIES 163 ANAPC1 (ENSGACG00000001281) ENSGACG00000001298 ENSGACG00000001299 MTRF1L (ENSGACG00000001302) desi2 (ENSGACG00000001304) ENSGACG00000001307 ENSGACG00000001309 ENSGACG00000001314 glud1a (ENSGACG00000001316) nfkb2 (ENSGACG00000001323) ENSGACG00000001338 ENSGACG00000001345 elovl6l (ENSGACG00000001349) CST7 (ENSGACG00000001353) #22 apmap (ENSGACG00000001354) #23 ENSGACG00000001371 ENSGACG00000001372 #24 Pinecone sodierfish MODERN SPECIES 6 ENSMMDG00005005947 QKI (ENSMMDG00005005941) ENSMMDG00005005935 ncoa4 (ENSMMDG00005005929) yipf3 (ENSMMDG00005005553) dnph1 (ENSMMDG00005005552) ENSMMDG00005005548 ENSMMDG00005005545 DLK2 (ENSMMDG00005005539) LRRC73 (ENSMMDG00005005537) ENSMMDG00005018825 ppp2r5d (ENSMMDG00005018729) ENSMMDG00005018716 CUL7 (ENSMMDG00005018677) SYNDIG1 (ENSMMDG00005018663) #20 CST7 (ENSMMDG00005018660) #22 apmap (ENSMMDG00005018655) #23 ENSMMDG00005018653 acss1 (ENSMMDG00005018619) #24 ENSMMDG00005018606 vsx1 (ENSMMDG00005018600) #25 entpd6 (ENSMMDG00005018585) #26 ENSMMDG00005018580 ENSMMDG00005018577 ENSMMDG00005018575 pygb (ENSMMDG00005015453) #27 abhd12 (ENSMMDG00005015315) gins1 (ENSMMDG00005015312) #29 ninl (ENSMMDG00005015306) #31 AIFM2 (ENSMMDG00005015301) elovl6l (ENSMMDG00005015296) Cod MODERN SPECIES 6 pcsk2 (ENSGMOG00000012662) BFSP1 (ENSGMOG00000036269) prokr1b (ENSGMOG00000012667) ENSGMOG00000025161 plek (ENSGMOG00000019204) pcdh15a (ENSGMOG00000001305) ENSGMOG00000029733 prkg1a (ENSGMOG00000025236) sgms1a (ENSGMOG00000036184) minpp1a (ENSGMOG00000011756) papss2a (ENSGMOG00000011763) ptena (ENSGMOG00000032805) ENSGMOG00000034043 ENSGMOG00000025368 nt5c2a (ENSGMOG00000016201) ENSGMOG00000011257 #22 borcs7 (ENSGMOG00000011250) cyp17a1 (ENSGMOG00000011243) ENSGMOG00000004318 fbxw4 (ENSGMOG00000015043) fgf8a (ENSGMOG00000015070) slc2a15a (ENSGMOG00000016589) ENSGMOG00000016612 tlx1 (ENSGMOG00000014671) ENSGMOG00000027921 cep68 (ENSGMOG00000032092) ENSGMOG00000004888 zgc:153169 (ENSGMOG00000036949) ENSGMOG00000036040 EDRF1 (ENSGMOG00000004831) DHX32 (ENSGMOG00000029453) Protacanthopterygii ANCESTRAL SPECIES 39 ENSGT01030000234576.D.a.a.b.b ENSGT00390000001094.z ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000158550 #24 ENSGT00940000160793 #25 ENSGT01100000263540.A.a #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a #31 ENSGT00390000004582 ENSGT01050000244965.a.b ENSGT00940000155061.a.b.k.a ENSGT00940000164992 ENSGT00390000003133 ENSGT00390000000854.c.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 61 ENSGT00940000155310.a.b.c.b ENSGT00940000155965.a.b ENSGT00390000001094.z ENSGT00390000008403.c ENSGT00940000153766.A.i ENSGT00390000003256.d ENSGT00940000164045.f ENSGT00940000160761.b ENSGT00390000001216 ENSGT00390000016927.d ENSGT01030000234620.a.a.a.b.o ENSGT00390000000614.c ENSGT00940000168290.b ENSGT00940000153954.wb ENSGT00950000183147.B.e.b #20 ENSGT00940000160277.c #22 ENSGT00440000039984.a.e #23 ENSGT00940000158550 #24 ENSGT00940000160793.a #25 ENSGT01100000263540.A.a.f #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a.k #31 ENSGT00390000004582 ENSGT01050000244965.a.b.h ENSGT00940000155061.a.b.k.a.n ENSGT00940000164992.l ENSGT00390000003133 ENSGT00390000000854.c.b Huchen MODERN SPECIES 84 prkn (ENSHHUG00000035262) QKI (ENSHHUG00000035243) ENSHHUG00000035238 ENSHHUG00000035223 ncoa4 (ENSHHUG00000035199) yipf3 (ENSHHUG00000035164) LRRC73 (ENSHHUG00000035148) ENSHHUG00000035141 DLK2 (ENSHHUG00000035130) dnph1 (ENSHHUG00000035121) mea1 (ENSHHUG00000035117) ppp2r5d (ENSHHUG00000034977) ENSHHUG00000034949 ENSHHUG00000034792 SYNDIG1 (ENSHHUG00000034791) #20 CST7 (ENSHHUG00000034784) #22 acss1 (ENSHHUG00000034737) #24 vsx1 (ENSHHUG00000034724) #25 entpd6 (ENSHHUG00000034722) #26 ENSHHUG00000034720 pygb (ENSHHUG00000033286) #27 abhd12 (ENSHHUG00000033222) gins1 (ENSHHUG00000033211) #29 ninl (ENSHHUG00000033194) #31 ENSHHUG00000033188 #31 AIFM2 (ENSHHUG00000033161) ENSHHUG00000033158 ENSHHUG00000033068 nfkb2 (ENSHHUG00000033003) shld2 (ENSHHUG00000032994) glud1a (ENSHHUG00000032696) Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00940000155310.a.b.c.b ENSGT00940000155965.a.b ENSGT00390000001094.z ENSGT00390000008403.c ENSGT00940000153766.A.i ENSGT00390000003256.d ENSGT00940000164045.f ENSGT00940000160761.b ENSGT00390000001216 ENSGT00390000016927.d ENSGT01030000234620.a.a.a.b.o ENSGT00390000000614.c ENSGT00940000168290.b ENSGT00940000153954.wb ENSGT00950000183147.B.e.b #20 ENSGT00940000160277.c #22 ENSGT00440000039984.a.e #23 ENSGT00940000158550 #24 ENSGT00940000160793.a #25 ENSGT01100000263540.A.a.f #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a.k #31 ENSGT00390000004582 ENSGT01050000244965.a.b.h ENSGT00940000155061.a.b.k.a.n ENSGT00940000164992.l ENSGT00390000003133 ENSGT00390000000854.c.b.e.a Salmo ANCESTRAL SPECIES 29 ENSGT00390000011034 ENSGT00940000155310.a.b.c.b ENSGT00940000155965.a.b ENSGT00390000001094.z ENSGT00390000008403.c ENSGT00940000153766.A.i ENSGT00390000003256.d ENSGT00940000164045.f ENSGT00940000160761.b ENSGT00390000001216 ENSGT00390000016927.d ENSGT01030000234620.a.a.a.b.o ENSGT00390000000614.c ENSGT00940000153954.wb ENSGT00950000183147.B.e.b #20 ENSGT00940000160277.c #22 ENSGT00440000039984.a.e #23 ENSGT00940000158550 #24 ENSGT00940000160793.a #25 ENSGT01100000263540.A.a.f #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a.k #31 ENSGT00390000004582 ENSGT01050000244965.a.b.h ENSGT00940000155061.a.b.k.a.n ENSGT00940000164992.l ENSGT00390000003133 ENSGT00390000000854.c.b.e.a River trout MODERN SPECIES 35 prkn (ENSSTUG00000015138) QKI (ENSSTUG00000015110) ENSSTUG00000015102 ENSSTUG00000015061 ncoa4 (ENSSTUG00000015035) yipf3 (ENSSTUG00000014906) LRRC73 (ENSSTUG00000014884) ENSSTUG00000014877 DLK2 (ENSSTUG00000014856) dnph1 (ENSSTUG00000014832) mea1 (ENSSTUG00000014812) ppp2r5d (ENSSTUG00000011009) ENSSTUG00000010904 ENSSTUG00000010014 SYNDIG1 (ENSSTUG00000009973) #20 CST7 (ENSSTUG00000009955) #22 apmap (ENSSTUG00000009921) #23 acss1 (ENSSTUG00000009719) #24 vsx1 (ENSSTUG00000009691) #25 entpd6 (ENSSTUG00000009629) #26 ENSSTUG00000009617 pygb (ENSSTUG00000009517) #27 abhd12 (ENSSTUG00000009109) gins1 (ENSSTUG00000009022) #29 ninl (ENSSTUG00000008953) #31 AIFM2 (ENSSTUG00000008903) elovl6l (ENSSTUG00000008882) ENSSTUG00000008701 nfkb2 (ENSSTUG00000008553) ENSSTUG00000008521 shld2 (ENSSTUG00000008515) Atlantic salmon MODERN SPECIES 9 ENSSSAG00000060440 ncoa4 (ENSSSAG00000060369) yipf3 (ENSSSAG00000060501) lrrc73 (ENSSSAG00000060630) ENSSSAG00000114068 ENSSSAG00000082235 dnph1 (ENSSSAG00000088880) ENSSSAG00000060738 mea1 (ENSSSAG00000105859) ppp2r5d (ENSSSAG00000104067) ENSSSAG00000064135 ENSSSAG00000064201 ENSSSAG00000066860 ENSSSAG00000108668 SYNDIG1 (ENSSSAG00000100580) #20 cst7 (ENSSSAG00000066883) #22 apmap (ENSSSAG00000066899) #23 ACS2L (ENSSSAG00000066956) #24 vsx1 (ENSSSAG00000067122) #25 entpd6 (ENSSSAG00000066870) #26 ENSSSAG00000118099 pygb (ENSSSAG00000067185) #27 abhd12 (ENSSSAG00000067416) gins1 (ENSSSAG00000067441) #29 ninl (ENSSSAG00000067460) #31 ENSSSAG00000067501 ENSSSAG00000110597 ENSSSAG00000067538 nfkb2 (ENSSSAG00000068892) glud1 (ENSSSAG00000068962) SNCG (ENSSSAG00000111421) Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000155310.a.b.c.b ENSGT00940000155965.a.b ENSGT01060000250178 ENSGT00390000008403.c ENSGT00940000153766.A.i ENSGT00390000003256.d ENSGT00940000164045.f ENSGT00940000160761.b ENSGT00390000001216 ENSGT00390000016927.d ENSGT01030000234620.a.a.a.b.o ENSGT00390000000614.c ENSGT00940000168290.b ENSGT00940000153954.wb ENSGT00950000183147.B.e.b #20 ENSGT00940000160277.c #22 ENSGT00440000039984.a.e #23 ENSGT00940000158550 #24 ENSGT00940000160793.a #25 ENSGT01100000263540.A.a.f #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a.k #31 ENSGT00390000004582 ENSGT00940000155061.a.b.k.a.n ENSGT00940000164992.l ENSGT00390000000854.c.b.e.a ENSGT00950000183175.A.d.a.b.a ENSGT01030000234633.C.a.a Rainbow trout MODERN SPECIES ENSOMYG00000032332 ENSOMYG00000032351 ncoa4 (ENSOMYG00000032388) yipf3 (ENSOMYG00000032419) ENSOMYG00000032454 ENSOMYG00000032553 DLK2 (ENSOMYG00000032836) dnph1 (ENSOMYG00000032849) mea1 (ENSOMYG00000032857) ppp2r5d (ENSOMYG00000033264) ENSOMYG00000075196 ENSOMYG00000034284 ENSOMYG00000034589 ENSOMYG00000069213 SYNDIG1 (ENSOMYG00000035879) #20 cytf (ENSOMYG00000035889) #22 APMAP (ENSOMYG00000035908) #23 ENSOMYG00000069041 ACSS1 (ENSOMYG00000000284) #24 vsx1 (ENSOMYG00000000318) #25 entpd6 (ENSOMYG00000000332) #26 ENSOMYG00000000353 pygb (ENSOMYG00000000808) #27 abhd12 (ENSOMYG00000001040) gins1 (ENSOMYG00000001219) #29 NINL (ENSOMYG00000001342) #31 aifm2 (ENSOMYG00000001396) ENSOMYG00000068417 ENSOMYG00000001816 nfkb2 (ENSOMYG00000002188) glud1 (ENSOMYG00000002516) Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000155310.a.b.c.b ENSGT00940000155965.a.b ENSGT01060000250178 ENSGT00390000008403.c ENSGT00940000153766.A.i ENSGT00390000003256.d ENSGT00940000164045.f ENSGT00940000160761.b ENSGT00390000001216 ENSGT00390000016927.d ENSGT01030000234620.a.a.a.b.o ENSGT00390000000614.c ENSGT00940000168290.b ENSGT00940000153954.wb ENSGT00950000183147.B.e.b #20 ENSGT00940000160277.c #22 ENSGT00440000039984.a.e #23 ENSGT00940000158550 #24 ENSGT00940000160793.a #25 ENSGT01100000263540.A.a.f #26 ENSGT00390000018613.a ENSGT00950000183148.b.b #27 ENSGT00940000166409 ENSGT00390000013968 #29 ENSGT00660000095541.a.a.k #31 ENSGT00390000004582 ENSGT00940000155061.a.b.k.a.n ENSGT00940000164992.l ENSGT00390000000854.c.b.e.a ENSGT00950000183175.A.d.a.b.a ENSGT01030000234633.C.a.a Coho salmon MODERN SPECIES 24 QKI (ENSOKIG00005002819) ENSOKIG00005002833 ENSOKIG00005002837 ncoa4 (ENSOKIG00005002858) yipf3 (ENSOKIG00005002897) LRRC73 (ENSOKIG00005002943) ENSOKIG00005002951 DLK2 (ENSOKIG00005002962) dnph1 (ENSOKIG00005002975) mea1 (ENSOKIG00005002986) ppp2r5d (ENSOKIG00005003028) ENSOKIG00005003258 ENSOKIG00005003279 ENSOKIG00005003399 SYNDIG1 (ENSOKIG00005003890) #20 CST7 (ENSOKIG00005003894) #22 apmap (ENSOKIG00005003908) #23 acss1 (ENSOKIG00005003938) #24 ENSOKIG00005003992 vsx1 (ENSOKIG00005003996) #25 pygb (ENSOKIG00005004087) #27 ENSOKIG00005004691 ENSOKIG00005004695 abhd12 (ENSOKIG00005004764) gins1 (ENSOKIG00005005778) #29 ninl (ENSOKIG00005005819) #31 AIFM2 (ENSOKIG00005005856) ENSOKIG00005005951 nfkb2 (ENSOKIG00005006743) glud1a (ENSOKIG00005007006) SNCG (ENSOKIG00005007088) Chinook salmon MODERN SPECIES 30 QKI (ENSOTSG00005028098) ENSOTSG00005028105 ENSOTSG00005028107 ncoa4 (ENSOTSG00005028108) yipf3 (ENSOTSG00005028110) LRRC73 (ENSOTSG00005028111) ENSOTSG00005028115 DLK2 (ENSOTSG00005028150) dnph1 (ENSOTSG00005028160) mea1 (ENSOTSG00005028161) ppp2r5d (ENSOTSG00005028181) ENSOTSG00005031664 ENSOTSG00005031666 ENSOTSG00005031669 SYNDIG1 (ENSOTSG00005031693) #20 CST7 (ENSOTSG00005031696) #22 apmap (ENSOTSG00005031698) #23 acss1 (ENSOTSG00005031722) #24 vsx1 (ENSOTSG00005031958) #25 entpd6 (ENSOTSG00005031959) #26 ENSOTSG00005031961 pygb (ENSOTSG00005031972) #27 abhd12 (ENSOTSG00005032395) gins1 (ENSOTSG00005032493) #29 ninl (ENSOTSG00005032502) #31 AIFM2 (ENSOTSG00005032504) ENSOTSG00005032517 nfkb2 (ENSOTSG00005034235) glud1a (ENSOTSG00005034596) SNCG (ENSOTSG00005034638) mmrn2a (ENSOTSG00005034639) Salmoninae ANCESTRAL SPECIES 82 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b ENSGT01060000249975 ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c ENSGT01030000234620.a.a.a.b.p ENSGT00390000000614.d ENSGT00940000168290.a ENSGT00940000172797 ENSGT00940000153954.vb ENSGT00950000183147.B.e.a #20 ENSGT00940000160277.d #22 ENSGT00440000039984.a.f #23 ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00940000160793.b #25 ENSGT01100000263540.A.a.e #26 ENSGT01000000220547 ENSGT00660000095541.a.a.l #31 ENSGT01050000244965.a.b.g ENSGT00940000155061.a.b.k.a.m ENSGT00940000164992.k ENSGT00950000183175.A.d.a.b.b ENSGT01030000234633.C.a.b ENSGT00940000156225.z ENSGT00940000154877.B.a.a ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000155571.A.g.b Salmoninae_a ANCESTRAL SPECIES 16 ENSGT00990000210314 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b ENSGT01060000249975 ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c ENSGT01030000234620.a.a.a.b.p ENSGT00390000000614.d ENSGT00940000168290.a ENSGT00940000153954.vb ENSGT00950000183147.B.e.a #20 ENSGT00940000160277.d #22 ENSGT00440000039984.a.f #23 ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00940000160793.b #25 ENSGT01100000263540.A.a.e #26 ENSGT00660000095541.a.a.l #31 ENSGT01050000244965.a.b.g ENSGT00940000155061.a.b.k.a.m ENSGT00940000164992.k ENSGT00390000000854.c.b.e.b ENSGT00950000183175.A.d.a.b.b ENSGT01030000234633.C.a.b ENSGT00940000156225.z ENSGT00940000154877.B.a.a ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000155571.A.g.b Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b ENSGT01060000249975 ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c ENSGT01030000234620.a.a.a.b.p ENSGT00970000196788.I ENSGT00390000000614.d ENSGT00940000168290.a ENSGT00940000153954.vb ENSGT00950000183147.B.e.a #20 ENSGT00940000160277.d #22 ENSGT00440000039984.a.f #23 ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00940000160793.b #25 ENSGT01100000263540.A.a.e #26 ENSGT01000000220547 ENSGT00660000095541.a.a.l #31 ENSGT01050000244965.a.b.g ENSGT00940000155061.a.b.k.a.m ENSGT00940000164992.k ENSGT00390000000854.c.b.e.b ENSGT00950000183175.A.d.a.b.b ENSGT01030000234633.C.a.b ENSGT00940000156225.z ENSGT00940000154877.B.a.a ENSGT01100000263502.B.a.a.d.a.a.d Rainbow trout MODERN SPECIES 15 ENSOMYG00000032001 ncoa4 (ENSOMYG00000032024) yipf3 (ENSOMYG00000032086) ENSOMYG00000032182 ENSOMYG00000032186 DLK2 (ENSOMYG00000032195) ENSOMYG00000048363 mea1 (ENSOMYG00000032200) ppp2r5d (ENSOMYG00000032657) ENSOMYG00000035933 ENSOMYG00000056739 ENSOMYG00000039523 ENSOMYG00000063719 ENSOMYG00000036358 SYNDIG1 (ENSOMYG00000039560) #20 CST7 (ENSOMYG00000039577) #22 APMAP (ENSOMYG00000039623) #23 ENSOMYG00000039660 VSX1 (ENSOMYG00000039674) #25 ENTPD6 (ENSOMYG00000039742) #26 ENSOMYG00000039824 ENSOMYG00000050633 ENSOMYG00000039842 #31 ENSOMYG00000040710 ENSOMYG00000039873 ENSOMYG00000039983 ENSOMYG00000040602 SNCG (ENSOMYG00000040891) mmrn2a (ENSOMYG00000040901) bmpr1aa (ENSOMYG00000041006) ldb3a (ENSOMYG00000042037) Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b ENSGT01060000249975 ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c ENSGT01030000234620.a.a.a.b.p ENSGT00970000196788.I ENSGT00390000000614.d ENSGT00940000168290.a ENSGT00940000153954.vb ENSGT00950000183147.B.e.a #20 ENSGT00940000160277.d #22 ENSGT00440000039984.a.f #23 ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00940000160793.b #25 ENSGT01100000263540.A.a.e #26 ENSGT00660000095541.a.a.l #31 ENSGT01050000244965.a.b.g ENSGT00940000155061.a.b.k.a.m ENSGT00940000164992.k ENSGT00390000000854.c.b.e.b ENSGT00950000183175.A.d.a.b.b ENSGT01030000234633.C.a.b ENSGT00940000156225.z ENSGT00940000154877.B.a.a ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000155571.A.g.b Chinook salmon MODERN SPECIES ENSOTSG00005037122 ENSOTSG00005037123 ncoa4 (ENSOTSG00005037124) yipf3 (ENSOTSG00005000175) LRRC73 (ENSOTSG00005000184) ENSOTSG00005000186 ENSOTSG00005000189 DLK2 (ENSOTSG00005000190) mea1 (ENSOTSG00005000191) ppp2r5d (ENSOTSG00005000200) ENSOTSG00005000381 ENSOTSG00005000383 ENSOTSG00005000388 ENSOTSG00005000433 SYNDIG1 (ENSOTSG00005001516) #20 CST7 (ENSOTSG00005001518) #22 apmap (ENSOTSG00005001520) #23 ENSOTSG00005001525 vsx1 (ENSOTSG00005001527) #25 entpd6 (ENSOTSG00005001534) #26 ENSOTSG00005001541 ninl (ENSOTSG00005001552) #31 elovl6l (ENSOTSG00005001594) PSD (ENSOTSG00005001611) glud1a (ENSOTSG00005005296) sncgb (ENSOTSG00005006003) mmrn2a (ENSOTSG00005006005) bmpr1aa (ENSOTSG00005006028) ldb3a (ENSOTSG00005008616) opn4a (ENSOTSG00005008620) usp54a (ENSOTSG00005008635) Coho salmon MODERN SPECIES 2 QKI (ENSOKIG00005002772) ENSOKIG00005002759 ENSOKIG00005002735 ncoa4 (ENSOKIG00005002717) yipf3 (ENSOKIG00005002612) LRRC73 (ENSOKIG00005002574) ENSOKIG00005002559 DLK2 (ENSOKIG00005002543) mea1 (ENSOKIG00005002530) ppp2r5d (ENSOKIG00005002191) ENSOKIG00005002026 ENSOKIG00005002009 ENSOKIG00005001964 ENSOKIG00005049278 SYNDIG1 (ENSOKIG00005049150) #20 CST7 (ENSOKIG00005049146) #22 APMAP (ENSOKIG00005049139) #23 ENSOKIG00005049138 vsx1 (ENSOKIG00005049133) #25 entpd6 (ENSOKIG00005049122) #26 ENSOKIG00005049111 #31 elovl6l (ENSOKIG00005049104) ENSOKIG00005049102 ENSOKIG00005048658 nfkb2 (ENSOKIG00005048514) glud1a (ENSOKIG00005048374) SNCG (ENSOKIG00005048349) mmrn2a (ENSOKIG00005048348) bmpr1aa (ENSOKIG00005048228) ldb3a (ENSOKIG00005048125) opn4a (ENSOKIG00005048102) Salmo ANCESTRAL SPECIES 23 ENSGT00990000210314 ENSGT01060000251565 ENSGT00940000155310.a.b.c.a ENSGT01030000234576.D.a.a.b.b.g ENSGT00390000008403.d ENSGT00940000153766.A.j ENSGT00390000003256.c ENSGT00940000164045.e ENSGT00940000160761.a ENSGT00390000016927.c ENSGT01030000234620.a.a.a.b.p ENSGT00390000000614.d ENSGT00940000168290.a ENSGT00940000153954.vb ENSGT00950000183147.B.e.a #20 ENSGT00940000160277.d #22 ENSGT00440000039984.a.f #23 ENSGT01100000263520.a.a.a.a.b.b.b ENSGT00940000160793.b #25 ENSGT01100000263540.A.a.e #26 ENSGT00660000095541.a.a.l #31 ENSGT01050000244965.a.b.g ENSGT00940000155061.a.b.k.a.m ENSGT00940000164992.k ENSGT00390000000854.c.b.e.b ENSGT00950000183175.A.d.a.b.b ENSGT01030000234633.C.a.b ENSGT00940000156225.z ENSGT00940000154877.B.a.a ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000155571.A.g.b River trout MODERN SPECIES 9 ENSSTUG00000015210 ENSSTUG00000015213 QKI (ENSSTUG00000015221) ENSSTUG00000015253 ncoa4 (ENSSTUG00000015261) yipf3 (ENSSTUG00000015288) LRRC73 (ENSSTUG00000015414) ENSSTUG00000024881 DLK2 (ENSSTUG00000024891) mea1 (ENSSTUG00000024902) ppp2r5d (ENSSTUG00000024928) ENSSTUG00000025492 ENSSTUG00000025511 ENSSTUG00000025613 SYNDIG1 (ENSSTUG00000028413) #20 CST7 (ENSSTUG00000028429) #22 apmap (ENSSTUG00000028444) #23 ENSSTUG00000028481 vsx1 (ENSSTUG00000028490) #25 entpd6 (ENSSTUG00000028521) #26 ENSSTUG00000028578 ninl (ENSSTUG00000028594) #31 elovl6l (ENSSTUG00000028713) ENSSTUG00000028784 nfkb2 (ENSSTUG00000030346) glud1a (ENSSTUG00000030436) SNCG (ENSSTUG00000030733) mmrn2a (ENSSTUG00000030752) bmpr1aa (ENSSTUG00000030770) ldb3a (ENSSTUG00000031482) opn4a (ENSSTUG00000031800) Huchen MODERN SPECIES 122 ENSHHUG00000036304 ENSHHUG00000036238 ncoa4 (ENSHHUG00000036221) ENSHHUG00000036220 yipf3 (ENSHHUG00000036178) LRRC73 (ENSHHUG00000036163) ENSHHUG00000036153 DLK2 (ENSHHUG00000036147) mea1 (ENSHHUG00000036141) ppp2r5d (ENSHHUG00000034937) ENSHHUG00000034918 ENSHHUG00000034908 ENSHHUG00000034903 ENSHHUG00000034867 SYNDIG1 (ENSHHUG00000034857) #20 CST7 (ENSHHUG00000034852) #22 apmap (ENSHHUG00000034770) #23 ENSHHUG00000034749 vsx1 (ENSHHUG00000034739) #25 entpd6 (ENSHHUG00000034730) #26 ENSHHUG00000034726 ninl (ENSHHUG00000034714) #31 elovl6l (ENSHHUG00000034710) PSD (ENSHHUG00000034682) nfkb2 (ENSHHUG00000034665) ENSHHUG00000034429 ENSHHUG00000034404 ENSHHUG00000034399 mmrn2a (ENSHHUG00000034393) bmpr1aa (ENSHHUG00000034314) ldb3a (ENSHHUG00000034284) Northern pike MODERN SPECIES 5 QKI (ENSELUG00000016698) ENSELUG00000016707 ENSELUG00000016738 ncoa4 (ENSELUG00000016764) yipf3 (ENSELUG00000016794) LRRC73 (ENSELUG00000016819) ENSELUG00000016871 DLK2 (ENSELUG00000016914) dnph1 (ENSELUG00000016938) mea1 (ENSELUG00000016957) ppp2r5d (ENSELUG00000017007) ENSELUG00000017055 ENSELUG00000017093 CUL7 (ENSELUG00000017179) SYNDIG1 (ENSELUG00000017206) #20 cst7 (ENSELUG00000017246) #22 apmap (ENSELUG00000017302) #23 ENSELUG00000017463 acss1 (ENSELUG00000017505) #24 ENSELUG00000032087 vsx1 (ENSELUG00000017514) #25 entpd6 (ENSELUG00000017602) #26 ENSELUG00000000687 pygb (ENSELUG00000017645) #27 abhd12 (ENSELUG00000017692) gins1 (ENSELUG00000017723) #29 ninl (ENSELUG00000017789) #31 AIFM2 (ENSELUG00000017848) elovl6l (ENSELUG00000017862) ENSELUG00000017891 nfkb2 (ENSELUG00000001190) Otomorpha ANCESTRAL SPECIES 32 ENSGT00940000155310.a.b ENSGT01030000234576.D.a.a.b.b ENSGT00390000001094 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 Clupeiformes ANCESTRAL SPECIES 35 ENSGT00940000155310.a.b ENSGT00940000172304.a.a ENSGT00390000001094.`b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000167706 Denticle herring MODERN SPECIES 18 gins1 (ENSDCDG00000006578) #29 abhd12 (ENSDCDG00000005432) ENSDCDG00000005423 ENSDCDG00000005418 ENSDCDG00000005416 ENSDCDG00000005414 col9a1b (ENSDCDG00000005409) ENSDCDG00000005398 lmbrd1 (ENSDCDG00000004966) ADGRB3 (ENSDCDG00000004380) zgc:171579 (ENSDCDG00000004319) ENSDCDG00000004312 ENSDCDG00000004303 ENSDCDG00000004246 SYNDIG1 (ENSDCDG00000004245) #20 ENSDCDG00000004243 #22 apmap (ENSDCDG00000004223) #23 ENSDCDG00000004221 metrn (ENSDCDG00000004220) ENSDCDG00000004218 tmem204 (ENSDCDG00000004216) IFT140 (ENSDCDG00000004196) telo2 (ENSDCDG00000004118) rab11fip3 (ENSDCDG00000004094) decr2 (ENSDCDG00000004080) ENSDCDG00000004064 ENSDCDG00000004059 ENSDCDG00000004058 ENSDCDG00000004056 ENSDCDG00000004054 ARFGEF3 (ENSDCDG00000004040) Atlantic herring MODERN SPECIES 4 ENSCHAG00000008773 ENSCHAG00000008781 ncoa4 (ENSCHAG00000008809) yipf3 (ENSCHAG00000008825) LRRC73 (ENSCHAG00000008886) ENSCHAG00000008899 DLK2 (ENSCHAG00000008913) dnph1 (ENSCHAG00000009007) mea1 (ENSCHAG00000009013) ppp2r5d (ENSCHAG00000009027) ENSCHAG00000009156 PPP2R5D (ENSCHAG00000009221) ENSCHAG00000009343 CUL7 (ENSCHAG00000009408) SYNDIG1 (ENSCHAG00000011053) #20 ENSCHAG00000011088 #22 apmap (ENSCHAG00000011098) #23 ENSCHAG00000011129 TMEM26 (ENSCHAG00000011144) ENSCHAG00000011149 ENSCHAG00000011222 NEU3 (ENSCHAG00000011227) ENSCHAG00000011234 ENSCHAG00000011264 ENSCHAG00000011300 ENSCHAG00000011317 ENSCHAG00000011338 ENSCHAG00000011356 ENSCHAG00000011366 ide (ENSCHAG00000011376) marchf5 (ENSCHAG00000011612) Otophysi ANCESTRAL SPECIES ENSGT01030000234576.D.a.a.b.b ENSGT00730000112471 ENSGT00390000001094 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290.c ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000177578 ENSGT00940000158427 ENSGT00530000063168.b ENSGT00940000159781.a ENSGT00940000155172 ENSGT00940000154556.c.b ENSGT00940000156841.b ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000182898.a.a.b ENSGT00940000165949.d ENSGT00940000156695 ENSGT00390000014606 ENSGT00940000168294 Characiphysae ANCESTRAL SPECIES 92 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000001094 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290.c ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000177578 ENSGT00940000158427 ENSGT00530000063168.b ENSGT00940000159781.a ENSGT00940000155172 ENSGT00940000154556.c.b ENSGT00940000156841.b Channel catfish MODERN SPECIES 22 ENSIPUG00000012656 ENSIPUG00000012658 ncoa4 (ENSIPUG00000012683) yipf3 (ENSIPUG00000012701) lrrc73 (ENSIPUG00000012719) ENSIPUG00000012745 dlk2 (ENSIPUG00000012767) dnph1 (ENSIPUG00000012772) dnph1 (ENSIPUG00000012781) MEA1 (ENSIPUG00000012786) ppp2r5d (ENSIPUG00000012800) ENSIPUG00000012911 ENSIPUG00000012933 CUL7 (ENSIPUG00000012975) syndig1 (ENSIPUG00000013034) #20 ENSIPUG00000013075 #22 apmap (ENSIPUG00000013146) #23 si:zfos-1056e6.1 (ENSIPUG00000013185) ppm1g (ENSIPUG00000013217) fam120b (ENSIPUG00000013252) dll1 (ENSIPUG00000013296) phf10 (ENSIPUG00000013332) actr2b (ENSIPUG00000013357) herc4 (ENSIPUG00000013459) CACUL1 (ENSIPUG00000013656) ENSIPUG00000013666 b3galnt2 (ENSIPUG00000013696) ENSIPUG00000013741 ENSIPUG00000013814 ggps1 (ENSIPUG00000014206) arid4b (ENSIPUG00000014234) Characiphysae_b ANCESTRAL SPECIES 91 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000001094 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290.c ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000177578 ENSGT00940000158427 ENSGT00530000063168.b ENSGT00940000159781.a ENSGT00940000155172 ENSGT00940000154556.c.b ENSGT00940000156841.b Characoidei ANCESTRAL SPECIES 85 ENSGT00940000155310.a.b ENSGT00730000112471 ENSGT00390000001094 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290.c ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000177578 ENSGT00940000158427 ENSGT00530000063168.b ENSGT00940000159781.a ENSGT00940000155172 ENSGT00940000154556.c.b ENSGT00940000156841.b Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 397 ENSAMXG00000015487 ENSAMXG00000033445 SYNDIG1 (ENSAMXG00000015456) #20 ENSAMXG00000039601 #22 ENSAMXG00000015435 #22 apmap (ENSAMXG00000029358) #23 si:zfos-1056e6.1 (ENSAMXG00000037087) ppm1g (ENSAMXG00000015375) fam120b (ENSAMXG00000015356) dld (ENSAMXG00000015327) phf10 (ENSAMXG00000015307) actr2b (ENSAMXG00000039820) spred2b (ENSAMXG00000015252) Mexicana tetra MODERN SPECIES 397 ENSAMXG00000015487 ENSAMXG00000033445 SYNDIG1 (ENSAMXG00000015456) #20 ENSAMXG00000039601 #22 ENSAMXG00000015435 #22 apmap (ENSAMXG00000029358) #23 si:zfos-1056e6.1 (ENSAMXG00000037087) ppm1g (ENSAMXG00000015375) fam120b (ENSAMXG00000015356) dld (ENSAMXG00000015327) phf10 (ENSAMXG00000015307) actr2b (ENSAMXG00000039820) spred2b (ENSAMXG00000015252) Red-bellied piranha MODERN SPECIES 15 QKI (ENSPNAG00000002418) ENSPNAG00000006947 ENSPNAG00000012795 ncoa4 (ENSPNAG00000012778) yipf3 (ENSPNAG00000012759) LRRC73 (ENSPNAG00000012721) ENSPNAG00000012692 DLK2 (ENSPNAG00000012670) dnph1 (ENSPNAG00000012654) mea1 (ENSPNAG00000012647) ppp2r5d (ENSPNAG00000012632) ENSPNAG00000012550 ENSPNAG00000012423 CUL7 (ENSPNAG00000002223) SYNDIG1 (ENSPNAG00000012274) #20 ENSPNAG00000012252 #22 apmap (ENSPNAG00000002173) #23 si:zfos-1056e6.1 (ENSPNAG00000012232) ppm1g (ENSPNAG00000012199) fam120b (ENSPNAG00000012134) dld (ENSPNAG00000007177) phf10 (ENSPNAG00000012074) actr2b (ENSPNAG00000012032) spred2b (ENSPNAG00000011989) ENSPNAG00000011960 ENSPNAG00000011895 Electric eel MODERN SPECIES 61 QKI (ENSEEEG00000012672) ENSEEEG00000012674 ENSEEEG00000012676 ENSEEEG00000012679 ncoa4 (ENSEEEG00000012695) yipf3 (ENSEEEG00000012702) LRRC73 (ENSEEEG00000012721) ENSEEEG00000012740 DLK2 (ENSEEEG00000012815) dnph1 (ENSEEEG00000012816) mea1 (ENSEEEG00000012817) ppp2r5d (ENSEEEG00000012859) ENSEEEG00000015045 CUL7 (ENSEEEG00000015057) SYNDIG1 (ENSEEEG00000015099) #20 ENSEEEG00000015101 #22 apmap (ENSEEEG00000015104) #23 ppm1g (ENSEEEG00000015107) fam120b (ENSEEEG00000015112) dld (ENSEEEG00000015115) phf10 (ENSEEEG00000015121) actr2b (ENSEEEG00000015125) spred2b (ENSEEEG00000015133) meis1b (ENSEEEG00000015170) Cyprinoidei ANCESTRAL SPECIES 5 ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT01030000234576.D.a.a.b.b ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000003256 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000001216 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290.c ENSGT00940000153954 ENSGT00950000183147.B #20 ENSGT00940000160277 #22 ENSGT00440000039984.a #23 ENSGT00940000177578 ENSGT00940000158427 ENSGT00530000063168.b ENSGT00940000159781.a ENSGT00940000155172 ENSGT00940000154556.c.b ENSGT00940000156841.b ENSGT00390000009597.c ENSGT00390000015405 ENSGT00950000182898.a.a.b ENSGT00940000165949.d ENSGT00940000156695 ENSGT00390000014606 ENSGT00940000168294 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 679 ENSGT00940000164045.a ENSGT00940000160761.h ENSGT00390000016927.b ENSGT01030000234620.a.a.a.b.q ENSGT00390000000614.a ENSGT00940000168290.c ENSGT00390000016950.mb.b ENSGT00940000164832.e.b ENSGT00940000153954.p.a ENSGT00950000183147.B.i #20 ENSGT00940000160277.g #22 ENSGT00440000039984.a.h #23 ENSGT00940000158427.l Goldfish MODERN SPECIES 4 ENSCARG00000009754 ncoa4 (ENSCARG00000009756) YIPF3 (ENSCARG00000009765) LRRC73 (ENSCARG00000009783) ENSCARG00000009795 ENSCARG00000009797 DLK2 (ENSCARG00000009800) ENSCARG00000009802 mea1 (ENSCARG00000009803) ppp2r5d (ENSCARG00000009835) ENSCARG00000010248 ENSCARG00000010256 ENSCARG00000010295 ENSCARG00000010365 SYNDIG1 (ENSCARG00000012249) #20 ENSCARG00000012253 #22 apmap (ENSCARG00000012259) #23 ppm1g (ENSCARG00000012296) ENSCARG00000012381 dld (ENSCARG00000012387) phf10 (ENSCARG00000012446) actr2b (ENSCARG00000012523) spred2b (ENSCARG00000012867) meis1b (ENSCARG00000012889) hcrtr2 (ENSCARG00000012989) ENSCARG00000012995 hmgcll1 (ENSCARG00000013002) bmp5 (ENSCARG00000013025) ENSCARG00000013033 ENSCARG00000013050 DST (ENSCARG00000013253) Cyprininae_a ANCESTRAL SPECIES 216 ENSGT00940000155310.a.b.b ENSGT01030000234576.D.a.a.b.b ENSGT00390000008403.b ENSGT00940000153766.A.d ENSGT00390000003256.l ENSGT00940000164045.a ENSGT00940000160761.h ENSGT00390000016927.b ENSGT01030000234620.a.a.a.b.q ENSGT00390000000614.a ENSGT00940000168290.c ENSGT00390000016950.mb.b ENSGT00940000164832.e.b ENSGT00940000153954.p.a ENSGT00950000183147.B.i #20 ENSGT00940000160277.g #22 ENSGT00440000039984.a.h #23 ENSGT00940000158427.l Golden-line barbel MODERN SPECIES 696 ENSSGRG00000011022 ncoa4 (ENSSGRG00000011026) yipf3 (ENSSGRG00000011043) ENSSGRG00000011124 ENSSGRG00000011125 DLK2 (ENSSGRG00000011126) ENSSGRG00000011127 mea1 (ENSSGRG00000011128) ppp2r5d (ENSSGRG00000011173) ENSSGRG00000011621 ENSSGRG00000011624 tuba4l (ENSSGRG00000011625) ENSSGRG00000011825 ENSSGRG00000012347 SYNDIG1 (ENSSGRG00000012348) #20 ENSSGRG00000012349 #22 apmap (ENSSGRG00000012350) #23 ppm1g (ENSSGRG00000012354) Common carp reference MODERN SPECIES 18 ENSCCRG00000060502 ENSCCRG00000072209 ENSCCRG00000043120 ncoa4 (ENSCCRG00000025315) yipf3 (ENSCCRG00000014201) ENSCCRG00000025345 ENSCCRG00000025346 DLK2 (ENSCCRG00000075423) mea1 (ENSCCRG00000032060) ppp2r5d (ENSCCRG00000013598) ENSCCRG00000053139 ENSCCRG00000032909 ENSCCRG00000006806 ENSCCRG00000009151 SYNDIG1 (ENSCCRG00000052830) #20 ENSCCRG00000043207 #22 APMAP (ENSCCRG00000044787) #23 ppm1g (ENSCCRG00000023864) dld (ENSCCRG00000063931) phf10 (ENSCCRG00000038504) actr2b (ENSCCRG00000038495) spred2b (ENSCCRG00000054545) ENSCCRG00000014014 meis1b (ENSCCRG00000066831) ENSCCRG00000044582 ENSCCRG00000073654 ENSCCRG00000066982 C1D (ENSCCRG00000007108) ENSCCRG00000024770 psap (ENSCCRG00000021225) ENSCCRG00000021154 Cyprininae ANCESTRAL SPECIES 175 ENSGT01030000234576.D.a.a.b.b ENSGT00390000008403.b ENSGT00940000153766.A.d ENSGT00390000003256 ENSGT00940000164045.b ENSGT00940000160761.g ENSGT00390000001216 ENSGT00390000016927.a ENSGT01030000234620.a.a.a.b.r ENSGT00390000000614.b ENSGT00390000016950.mb.a ENSGT00940000154457.b ENSGT00940000160203.d ENSGT00940000153954.p.b ENSGT00950000183147.B.j #20 ENSGT00940000160277.h #22 ENSGT00440000039984.a.g #23 ENSGT00940000177578 ENSGT00940000158427.k ENSGT00530000063168.b ENSGT00940000159781.a ENSGT00940000155172.n ENSGT00940000154556.c.b.a.a ENSGT00940000156841.b.a.a ENSGT00940000156327.l.i.b ENSGT00390000009597.c.a ENSGT00940000155172.m ENSGT00940000154556.c.b.a.b ENSGT00940000156841.b.a.b ENSGT00940000156327.l.i.a.b ENSGT00390000009597.c.b Goldfish MODERN SPECIES 31 ENSCARG00000064461 ENSCARG00000064475 ncoa4 (ENSCARG00000064498) yipf3 (ENSCARG00000064521) LRRC73 (ENSCARG00000064574) ENSCARG00000064608 DLK2 (ENSCARG00000064613) dnph1 (ENSCARG00000064617) mea1 (ENSCARG00000064621) ppp2r5d (ENSCARG00000064665) ENSCARG00000065862 ENSCARG00000065869 tuba4l (ENSCARG00000065884) ENSCARG00000065953 SYNDIG1 (ENSCARG00000066665) #20 ENSCARG00000066672 #22 apmap (ENSCARG00000066697) #23 ppm1g (ENSCARG00000066740) fam120b (ENSCARG00000066832) dld (ENSCARG00000066882) ENSCARG00000066936 phf10 (ENSCARG00000066956) actr2b (ENSCARG00000067043) spred2b (ENSCARG00000067122) meis1b (ENSCARG00000067135) ENSCARG00000067186 c1d (ENSCARG00000067192) SLC29A3 (ENSCARG00000067210) ENSCARG00000067272 psap (ENSCARG00000067561) mrps6 (ENSCARG00000067692) Cyprininae_a ANCESTRAL SPECIES 53 ENSGT00390000001094.cb ENSGT00390000008403.a ENSGT00940000153766.A.c.a ENSGT00390000003256.k ENSGT00940000164045.b ENSGT00940000160761.g ENSGT00390000001216 ENSGT00390000016927.a ENSGT01030000234620.a.a.a.b.r ENSGT00390000000614.b ENSGT00390000016950.mb.a ENSGT00940000154457.b ENSGT00940000160203.d ENSGT00940000153954.p.b ENSGT00950000183147.B.j #20 ENSGT00940000160277.h #22 ENSGT00440000039984.a.g #23 ENSGT00940000177578 ENSGT00940000158427.k ENSGT00530000063168.b ENSGT00940000159781.a ENSGT00940000155172.n ENSGT00940000154556.c.b.a.a ENSGT00940000155172.m ENSGT00940000154556.c.b.a.b ENSGT00940000156841.b.a.a ENSGT00940000156327.l.i.b ENSGT00390000009597.c.a ENSGT00390000015405.rb ENSGT00950000182898.a.a.b.d ENSGT00940000165949.d.a Common carp reference MODERN SPECIES 48 ENSCCRG00000076016 ncoa4 (ENSCCRG00000043940) yipf3 (ENSCCRG00000043721) ENSCCRG00000014478 ENSCCRG00000074224 DLK2 (ENSCCRG00000014151) dnph1 (ENSCCRG00000014149) mea1 (ENSCCRG00000014142) ppp2r5d (ENSCCRG00000017599) ENSCCRG00000076445 ENSCCRG00000041623 ENSCCRG00000064864 ENSCCRG00000032904 ENSCCRG00000006858 SYNDIG1 (ENSCCRG00000009239) #20 ENSCCRG00000066381 #22 apmap (ENSCCRG00000078269) #23 si:zfos-1056e6.1 (ENSCCRG00000066192) ppm1g (ENSCCRG00000038969) fam120b (ENSCCRG00000023850) dld (ENSCCRG00000073129) phf10 (ENSCCRG00000001266) actr2b (ENSCCRG00000029183) spred2b (ENSCCRG00000080175) meis1b (ENSCCRG00000015609) ENSCCRG00000066123 ENSCCRG00000044445 ENSCCRG00000077133 C1D (ENSCCRG00000061546) ENSCCRG00000025614 psap (ENSCCRG00000058263) Golden-line barbel MODERN SPECIES 914 ENSSGRG00000026407 mea1 (ENSSGRG00000026406) ppp2r5d (ENSSGRG00000025175) ENSSGRG00000025137 ENSSGRG00000025135 ENSSGRG00000025124 ENSSGRG00000025029 SYNDIG1 (ENSSGRG00000025016) #20 ENSSGRG00000025012 #22 apmap (ENSSGRG00000024993) #23 ppm1g (ENSSGRG00000024846) ENSSGRG00000024757 Zebrafish MODERN SPECIES 1102 SYNDIG1 (ENSDARG00000100751) #20 ENSDARG00000101340 #22 Spotted gar MODERN SPECIES 654 GCM1 (ENSLOCG00000016883) fbxo9 (ENSLOCG00000016879) CILK1 (ENSLOCG00000016878) ENSLOCG00000016877 tmem14a (ENSLOCG00000016876) agpat5 (ENSLOCG00000016869) angpt2a (ENSLOCG00000016861) mcph1 (ENSLOCG00000016859) CSMD1 (ENSLOCG00000016854) myom2a (ENSLOCG00000016832) rnaset2 (ENSLOCG00000016824) ENSLOCG00000016813 mpc1 (ENSLOCG00000016811) ENSLOCG00000016808 SYNDIG1 (ENSLOCG00000016803) #20 CST7 (ENSLOCG00000016800) #22 apmap (ENSLOCG00000016798) #23 acss1 (ENSLOCG00000016791) #24 ENSLOCG00000016790 vsx1 (ENSLOCG00000016788) #25 entpd6 (ENSLOCG00000016784) #26 ENSLOCG00000016781 pygb (ENSLOCG00000016769) #27 abhd12 (ENSLOCG00000016763) gins1 (ENSLOCG00000016757) #29 ninl (ENSLOCG00000016750) #31 CUL7 (ENSLOCG00000016743) dnph1 (ENSLOCG00000016740) mea1 (ENSLOCG00000016738) ppp2r5d (ENSLOCG00000016734) ENSLOCG00000016733 Reedfish MODERN SPECIES 6 CILK1 (ENSECRG00000013210) ENSECRG00000013115 tmem14a (ENSECRG00000013096) agpat5 (ENSECRG00000013068) angpt2a (ENSECRG00000013004) mcph1 (ENSECRG00000012964) CSMD1 (ENSECRG00000012880) myom2a (ENSECRG00000012745) rnaset2 (ENSECRG00000012677) RPS6KA2 (ENSECRG00000012475) mpc1 (ENSECRG00000012376) ENSECRG00000012333 ENSECRG00000012294 ENSECRG00000012253 SYNDIG1 (ENSECRG00000012234) #20 CST7 (ENSECRG00000012218) #22 apmap (ENSECRG00000012195) #23 acss1 (ENSECRG00000021899) #24 vsx1 (ENSECRG00000021882) #25 entpd6 (ENSECRG00000021863) #26 ENSECRG00000021850 pygb (ENSECRG00000021640) #27 abhd12 (ENSECRG00000021559) gins1 (ENSECRG00000021536) #29 ninl (ENSECRG00000021472) #31 eif4a3 (ENSECRG00000021393) atl2 (ENSECRG00000021317) HNRNPLL (ENSECRG00000021277) galm (ENSECRG00000021251) srsf7b (ENSECRG00000021240) srsf7b (ENSECRG00000021219) Elephant shark MODERN SPECIES 1519 ENSCMIG00000003896 TBXT (ENSCMIG00000003909) pde10a (ENSCMIG00000003988) RPS6KA2 (ENSCMIG00000004449) tmem63a (ENSCMIG00000004958) TMEM63B (ENSCMIG00000004978) mrpl14 (ENSCMIG00000004996) vegfaa (ENSCMIG00000005000) ENSCMIG00000005017 mrps18a (ENSCMIG00000005020) rsph9 (ENSCMIG00000005023) ENSCMIG00000005034 #22 apmap (ENSCMIG00000005055) #23 acss1 (ENSCMIG00000005107) #24 ENSCMIG00000005127 ENSCMIG00000005136 ENSCMIG00000005141 entpd6 (ENSCMIG00000005150) #26 banf1 (ENSCMIG00000005163) pygb (ENSCMIG00000005253) #27 ABHD12 (ENSCMIG00000005541) #28 gins1 (ENSCMIG00000005557) #29 ninl (ENSCMIG00000005576) #31 eif4a3 (ENSCMIG00000005663) atl2 (ENSCMIG00000005812) ENSCMIG00000005852 galm (ENSCMIG00000005884)