Glires	ANCESTRAL SPECIES	17	ENSGT00940000156996	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877 #16	ENSGT00940000164098	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000164098	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.a #15	ENSGT00940000161877.c.b #16	ENSGT00940000164098	ENSGT00940000161877.d ##16	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000164901	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517	ENSGT00530000063880.a
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.a #15	ENSGT00940000161877.d ##16	ENSGT00940000161877.c.b #16	ENSGT00940000164098	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.e #18	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Marmotini	ANCESTRAL SPECIES	5	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.a #15	ENSGT00940000161877.d ##16	ENSGT00940000161877.c.b #16	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.e #18	ENSGT00940000154755.c.b.f #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000154617.B #33
Marmotini_b	ANCESTRAL SPECIES	140	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.a #15	ENSGT00940000161877.d ##16	ENSGT00940000161877.c.b #16	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.e #18	ENSGT00940000154755.c.b.f #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000154617.B #33
Arctic ground squirrel	MODERN SPECIES	114	ENSUPAG00010009850 #7	ENSUPAG00010009855 #8	CSTL1 (ENSUPAG00010009856) #9	CST11 (ENSUPAG00010009858) #10	ENSUPAG00010009872 #11	ENSUPAG00010009878 #12	CST8 (ENSUPAG00010009884) #13	ENSUPAG00010009895 #14	ENSUPAG00010009902 #15	ENSUPAG00010009918 #16	ENSUPAG00010009934 #17	ENSUPAG00010009938 #18	ENSUPAG00010009978 #19	SYNDIG1 (ENSUPAG00010009998) #20	ENSUPAG00010010012 #21	CST7 (ENSUPAG00010010018) #22	APMAP (ENSUPAG00010010025) #23	ACSS1 (ENSUPAG00010010043) #24	ENSUPAG00010010076 #25	VSX1 (ENSUPAG00010010081) #26	ENTPD6 (ENSUPAG00010010093) #27	PYGB (ENSUPAG00010010109) #28	ABHD12 (ENSUPAG00010010127) #29	GINS1 (ENSUPAG00010010140) #30	NINL (ENSUPAG00010010146) #31	NANP (ENSUPAG00010010172) #32	CHRNA7 (ENSUPAG00010010177) #33
Squirrel	MODERN SPECIES	220	NAPB (ENSSTOG00000022350)	CSTL1 (ENSSTOG00000024563) #9	CST11 (ENSSTOG00000004847) #10	ENSSTOG00000021841 #11	ENSSTOG00000024532 #12	CST8 (ENSSTOG00000004122) #13	ENSSTOG00000020102	ENSSTOG00000004129 #14	ENSSTOG00000028869 ##16	ENSSTOG00000015564 #16	ENSSTOG00000026963 #17	ENSSTOG00000023496	ENSSTOG00000001311 #18	ENSSTOG00000001243 #19	SYNDIG1 (ENSSTOG00000021952) #20	CST7 (ENSSTOG00000005896) #22	APMAP (ENSSTOG00000005903) #23	ACSS1 (ENSSTOG00000005944) #24	VSX1 (ENSSTOG00000026010) #26	ENTPD6 (ENSSTOG00000006956) #27	PYGB (ENSSTOG00000014388) #28	ABHD12 (ENSSTOG00000014396) #29	GINS1 (ENSSTOG00000014406) #30	NINL (ENSSTOG00000014411) #31	NANP (ENSSTOG00000002050) #32
Alpin marmot	MODERN SPECIES	33																CST7 (ENSMMMG00000021618) #22	APMAP (ENSMMMG00000021607) #23	ACSS1 (ENSMMMG00000021594) #24	VSX1 (ENSMMMG00000021586) #26	ENTPD6 (ENSMMMG00000021571) #27	PYGB (ENSMMMG00000021556) #28	ABHD12 (ENSMMMG00000021545) #29	GINS1 (ENSMMMG00000021538) #30	NINL (ENSMMMG00000021519) #31	ENSMMMG00000021516	NANP (ENSMMMG00000021513) #32	CHRNA7 (ENSMMMG00000021504) #33	ENSMMMG00000021501	OTUD7A (ENSMMMG00000021494)	ENSMMMG00000021489	ENSMMMG00000021473
Eurasian red squirrel	MODERN SPECIES	11	NAPB (ENSSVLG00005000227)	CSTL1 (ENSSVLG00005000168) #9	CST11 (ENSSVLG00005000162) #10	ENSSVLG00005000139 #11	ENSSVLG00005000133 #12	CST8 (ENSSVLG00005000126) #13	ENSSVLG00005012871 #14	ENSSVLG00005012823 ##16	ENSSVLG00005012749 #16	ENSSVLG00005012678	ENSSVLG00005012635 #17	ENSSVLG00005012618	ENSSVLG00005012569 #18	ENSSVLG00005012499 #18	SYNDIG1 (ENSSVLG00005012463) #20	CST7 (ENSSVLG00005012392) #22	APMAP (ENSSVLG00005012325) #23	ACSS1 (ENSSVLG00005012262) #24	ENSSVLG00005012189	VSX1 (ENSSVLG00005012048) #26	PYGB (ENSSVLG00005011885) #28	ABHD12 (ENSSVLG00005011759) #29	GINS1 (ENSSVLG00005011707) #30	NINL (ENSSVLG00005011654) #31	NANP (ENSSVLG00005011598) #32	ARL2BP (ENSSVLG00005011550)	ENSSVLG00005011535	CTXND1 (ENSSVLG00005011512)	ARNT2 (ENSSVLG00005011111)	ENSSVLG00005011041	ABHD17C (ENSSVLG00005010975)
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000155999	ENSGT00940000163276	ENSGT00940000156996	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.d ##16	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00960000186656.a.b	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000043445	FOXA2 (ENSHGLG00000048805)	PAX1 (ENSHGLG00000015866)	NKX2-2 (ENSHGLG00000048629)	NKX2-4 (ENSHGLG00000008824)	XRN2 (ENSHGLG00000014831)	KIZ (ENSHGLG00000014057)	ENSHGLG00000037468	ENSHGLG00000016477	ENSHGLG00000047697	ENSHGLG00000013572	ENSHGLG00000035992 #17	ENSHGLG00000001178 #19	ENSHGLG00000049828	ENSHGLG00000001156 #20	CST7 (ENSHGLG00000001075) #22	APMAP (ENSHGLG00000045360) #23	ENSHGLG00000042834 #24	ENSHGLG00000034236 #24	ENSHGLG00000039362	ENTPD6 (ENSHGLG00000000193) #27	PYGB (ENSHGLG00000000176) #28	ABHD12 (ENSHGLG00000035916) #29	ENSHGLG00000035611 #30	ENSHGLG00000040387	ENSHGLG00000000136	RASGRF1 (ENSHGLG00000000128)	ENSHGLG00000000119	ENSHGLG00000000106	ENSHGLG00000041324	ENSHGLG00000000301
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000163276	ENSGT00940000156996	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.d ##16	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.d #19	ENSGT00940000154755.c.b.c #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00530000063880.a
Guinea pig	MODERN SPECIES	8	THBD (ENSCPOG00000030575)	CD93 (ENSCPOG00000010252)	NXT1 (ENSCPOG00000008817)	GZF1 (ENSCPOG00000010790)	NAPB (ENSCPOG00000039063)	CSTL1 (ENSCPOG00000008734) #9	ENSCPOG00000003822 #10	ENSCPOG00000025993 #12	CST8 (ENSCPOG00000005550) #13	ENSCPOG00000021926 #14	ENSCPOG00000025294 ##16	ENSCPOG00000030716 #17	ENSCPOG00000030984 #19	ENSCPOG00000026799 #19	SYNDIG1 (ENSCPOG00000004943) #20	CST7 (ENSCPOG00000008022) #22	APMAP (ENSCPOG00000008131) #23	ACSS1 (ENSCPOG00000021704) #24	VSX1 (ENSCPOG00000003951) #26	ENTPD6 (ENSCPOG00000009587) #27	PYGB (ENSCPOG00000021215) #28	ABHD12 (ENSCPOG00000004078) #29	GINS1 (ENSCPOG00000000260) #30	NINL (ENSCPOG00000005041) #31	NANP (ENSCPOG00000031912) #32	ENSCPOG00000006435	ENSCPOG00000030176	ENSCPOG00000032111	NSFL1C (ENSCPOG00000004012)	ENSCPOG00000032891	SDCBP2 (ENSCPOG00000021957)
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000155999	ENSGT00940000163276	ENSGT00940000156996	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.d #19	ENSGT00940000154755.c.b.c #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT01030000234638.b.a.a	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000008063	ENSGT01100000263497.E.a.a	ENSGT00390000006806
Degu	MODERN SPECIES	114	PAX1 (ENSODEG00000012427)	FOXA2 (ENSODEG00000011162)	THBD (ENSODEG00000010709)	CD93 (ENSODEG00000012518)	NXT1 (ENSODEG00000019900)	GZF1 (ENSODEG00000013020)	NAPB (ENSODEG00000011065)	CSTL1 (ENSODEG00000010719) #9	CST11 (ENSODEG00000013274) #10	ENSODEG00000012595 #12	ENSODEG00000010448 #13	ENSODEG00000010611 #14	CST3 (ENSODEG00000012334) #17	ENSODEG00000019797	SYNDIG1 (ENSODEG00000012369) #20	CST7 (ENSODEG00000011264) #22	APMAP (ENSODEG00000010678) #23	ACSS1 (ENSODEG00000010733) #24	VSX1 (ENSODEG00000010102) #26	ENTPD6 (ENSODEG00000010721) #27	PYGB (ENSODEG00000011290) #28	ABHD12 (ENSODEG00000013149) #29	GINS1 (ENSODEG00000011331) #30	ENSODEG00000014252 #31	ENSODEG00000012295 #32	ENSODEG00000012183	MAN2B1 (ENSODEG00000010434)	WDR83OS (ENSODEG00000011674)	WDR83 (ENSODEG00000010258)	DHPS (ENSODEG00000010756)	ENSODEG00000011490
Long-tailed chinchilla	MODERN SPECIES	122	PAX1 (ENSCLAG00000016362)	FOXA2 (ENSCLAG00000014548)	THBD (ENSCLAG00000011994)	CD93 (ENSCLAG00000012062)	NXT1 (ENSCLAG00000012493)	GZF1 (ENSCLAG00000014714)	NAPB (ENSCLAG00000011540)	CSTL1 (ENSCLAG00000012446) #9	ENSCLAG00000011384 #10	ENSCLAG00000015474 #12	ENSCLAG00000015212 #13	ENSCLAG00000017066 #14	ENSCLAG00000015899 #19	ENSCLAG00000012454 #19	SYNDIG1 (ENSCLAG00000012586) #20	CST7 (ENSCLAG00000015428) #22	APMAP (ENSCLAG00000013445) #23	ACSS1 (ENSCLAG00000012190) #24	VSX1 (ENSCLAG00000015160) #26	ENSCLAG00000015639 #27	PYGB (ENSCLAG00000012954) #28	ABHD12 (ENSCLAG00000010950) #29	GINS1 (ENSCLAG00000010830) #30	NINL (ENSCLAG00000011605) #31	NANP (ENSCLAG00000014668) #32	ZNF333 (ENSCLAG00000014959)	MAN2B1 (ENSCLAG00000013086)	ENSCLAG00000011821	WDR83 (ENSCLAG00000012198)	DHPS (ENSCLAG00000012256)	FBXW9 (ENSCLAG00000012587)
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000156996	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.a #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000156996	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.a #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000156996	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.a #19	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.b.a #19	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.b.a #19	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Chinese hamster chok1gshd	MODERN SPECIES	188	Napb (ENSCGRG00001015884)	Cstl1 (ENSCGRG00001006313) #9	Cst11 (ENSCGRG00001004859) #10	Cstdc1 (ENSCGRG00001024407) #11	Cst12 (ENSCGRG00001024036) #12	Cst8 (ENSCGRG00001020750) #13	Cst13 (ENSCGRG00001024079) #14	ENSCGRG00001017812 #16	ENSCGRG00001014456	ENSCGRG00001020338	ENSCGRG00001017333 #19	Cst10 (ENSCGRG00001015577) #19	ENSCGRG00001019793	Syndig1 (ENSCGRG00001019306) #20	ENSCGRG00001015934	Cst7 (ENSCGRG00001014715) #22	Apmap (ENSCGRG00001000472) #23	Acss1 (ENSCGRG00001016253) #24	Vsx1 (ENSCGRG00001021064) #26	Entpd6 (ENSCGRG00001018431) #27	Pygb (ENSCGRG00001023540) #28	Abhd12 (ENSCGRG00001013771) #29	Gins1 (ENSCGRG00001011595) #30	ENSCGRG00001000897	Ninl (ENSCGRG00001000443) #31	Nanp (ENSCGRG00001002985) #32	ENSCGRG00001011715	Nsfl1c (ENSCGRG00001016159)	Fkbp1a (ENSCGRG00001006692)	Sdcbp2 (ENSCGRG00001000837)	Snph (ENSCGRG00001023538)
Golden Hamster	MODERN SPECIES	650	Foxa2 (ENSMAUG00000016457)	Sstr4 (ENSMAUG00000008430)	Cd93 (ENSMAUG00000019441)	Nxt1 (ENSMAUG00000004141)	Gzf1 (ENSMAUG00000019656)	Napb (ENSMAUG00000018004)	Cst12 (ENSMAUG00000010970) #12	Cst13 (ENSMAUG00000021851) #14	Cst9 (ENSMAUG00000012174) #16	Cstdc2 (ENSMAUG00000014409) #15	Cst3 (ENSMAUG00000012476) #17	Cst10 (ENSMAUG00000020427) #19	ENSMAUG00000013001	Syndig1 (ENSMAUG00000012485) #20	1810024B03Rik (ENSMAUG00000019265)	Cst7 (ENSMAUG00000006797) #22	Apmap (ENSMAUG00000022255) #23	Acss1 (ENSMAUG00000016079) #24	Vsx1 (ENSMAUG00000011376) #26	Entpd6 (ENSMAUG00000001297) #27	Pygb (ENSMAUG00000017595) #28	Abhd12 (ENSMAUG00000008947) #29	Gins1 (ENSMAUG00000007925) #30	Ninl (ENSMAUG00000021812) #31	Nanp (ENSMAUG00000005527) #32	ENSMAUG00000017073	Nsfl1c (ENSMAUG00000010106)	ENSMAUG00000010062	Sdcbp2 (ENSMAUG00000016605)	Snph (ENSMAUG00000017593)	ENSMAUG00000014672
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.b.a #19	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Prairie vole	MODERN SPECIES	183												Cst10 (ENSMOCG00000001615) #19	ENSMOCG00000013859	Syndig1 (ENSMOCG00000000664) #20	1810024B03Rik (ENSMOCG00000000132)	Cst7 (ENSMOCG00000004809) #22	Apmap (ENSMOCG00000012045) #23	Acss1 (ENSMOCG00000017761) #24	Vsx1 (ENSMOCG00000004010) #26	Entpd6 (ENSMOCG00000010755) #27	Pygb (ENSMOCG00000000113) #28	Abhd12 (ENSMOCG00000003134) #29	Gins1 (ENSMOCG00000010221) #30	ENSMOCG00000009484 #31	ENSMOCG00000001430 #32
Northern American deer mouse	MODERN SPECIES	17	Nxt1 (ENSPEMG00000010397)	Gzf1 (ENSPEMG00000011285)	Napb (ENSPEMG00000014658)	Cstl1 (ENSPEMG00000015396) #9	Cst11 (ENSPEMG00000000143) #10	Cstdc1 (ENSPEMG00000018705) #11	Cst12 (ENSPEMG00000000557) #12	Cst8 (ENSPEMG00000030932) #13	Cst13 (ENSPEMG00000005338) #14	Cst9 (ENSPEMG00000020106) #16	Cst3 (ENSPEMG00000019347) #17	ENSPEMG00000028985 #19	ENSPEMG00000025257	Cst10 (ENSPEMG00000018501) #19	Syndig1 (ENSPEMG00000002878) #20	Cst7 (ENSPEMG00000001829) #22	Apmap (ENSPEMG00000013192) #23	Acss1 (ENSPEMG00000014809) #24	Vsx1 (ENSPEMG00000016349) #26	Entpd6 (ENSPEMG00000011143) #27	Pygb (ENSPEMG00000016365) #28	Abhd12 (ENSPEMG00000023436) #29	Gins1 (ENSPEMG00000013343) #30	Ninl (ENSPEMG00000011872) #31	Nanp (ENSPEMG00000029409) #32	Nsfl1c (ENSPEMG00000023871)	Fkbp1a (ENSPEMG00000028282)	Sdcbp2 (ENSPEMG00000017701)	Snph (ENSPEMG00000023065)	Rad21l (ENSPEMG00000023240)	Tmem74bos (ENSPEMG00000024790)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Mus	ANCESTRAL SPECIES	1	ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00940000160886.o.a	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638
Mus_A	ANCESTRAL SPECIES		ENSGT00940000162041	ENSGT00870000136554	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000172008	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000153805.q.b.a.a.a.b.a	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
Mouse	MODERN SPECIES	11	Cst13 (ENSMUSG00000036924) #14	Cst9 (ENSMUSG00000027445) #16	Cstdc2 (ENSMUSG00000027446) #15	Cst3 (ENSMUSG00000027447) #17	Gm1330 (ENSMUSG00000063507)	Cst10 (ENSMUSG00000033156) #19	Syndig1 (ENSMUSG00000074736) #20	Zfp120 (ENSMUSG00000068134)	Gm14139 (ENSMUSG00000079009)	Zfp937 (ENSMUSG00000060336)	Gm14124 (ENSMUSG00000079008)	3300002I08Rik (ENSMUSG00000063364)	Gm10130 (ENSMUSG00000095315)	Zfp442 (ENSMUSG00000068130)	Zfp345 (ENSMUSG00000074731)	Cst7 (ENSMUSG00000068129) #22	Apmap (ENSMUSG00000033096) #23	Acss1 (ENSMUSG00000027452) #24	Vsx1 (ENSMUSG00000033080) #26	Entpd6 (ENSMUSG00000033068) #27	Pygb (ENSMUSG00000033059) #28	Abhd12 (ENSMUSG00000032046) #29	Gins1 (ENSMUSG00000027454) #30	Ninl (ENSMUSG00000068115) #31	Nanp (ENSMUSG00000053916) #32	Gm14151 (ENSMUSG00000079006)	Gm14147 (ENSMUSG00000079005)	4921509C19Rik (ENSMUSG00000061525)	Nsfl1c (ENSMUSG00000027455)	Fkbp1a (ENSMUSG00000032966)	Sdcbp2 (ENSMUSG00000027456)
Mus_C	ANCESTRAL SPECIES		ENSGT00390000005826.a.b	ENSGT00900000141212 #9	ENSGT00910000144356 #10	ENSGT00940000162636.B #11	ENSGT00940000162636.A #12	ENSGT00940000162294 #13	ENSGT00940000163249 #14	ENSGT00940000161877.c.b #16	ENSGT00940000161877.c.a #15	ENSGT00940000154755.c.a #17	ENSGT00940000172008	ENSGT00940000154755.c.b.a #19	ENSGT00860000135980	ENSGT00950000183147.B #20	ENSGT00940000153805.q.b.a.a.a.b.a	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #26	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.b.a	ENSGT00940000161179	ENSGT00520000055634.b	ENSGT00940000161638	ENSGT00490000044517
spretus	MODERN SPECIES	11	Napb (MGP_SPRETEiJ_G0025328)	Cstl1 (MGP_SPRETEiJ_G0025329) #9	Cst11 (MGP_SPRETEiJ_G0025330) #10	Cstdc1 (MGP_SPRETEiJ_G0025331) #11	Cst12 (MGP_SPRETEiJ_G0025332) #12	Cst8 (MGP_SPRETEiJ_G0025333) #13	Cst13 (MGP_SPRETEiJ_G0025334) #14	Cst9 (MGP_SPRETEiJ_G0025335) #16	Cstdc2 (MGP_SPRETEiJ_G0025336) #15	Cst3 (MGP_SPRETEiJ_G0025337) #17	MGP_SPRETEiJ_G0025338	Cst10 (MGP_SPRETEiJ_G0025339) #19	Syndig1 (MGP_SPRETEiJ_G0025340) #20	MGP_SPRETEiJ_G0025341	Zfp120 (MGP_SPRETEiJ_G0025342)	Cst7 (MGP_SPRETEiJ_G0025343) #22	Apmap (MGP_SPRETEiJ_G0025344) #23	Acss1 (MGP_SPRETEiJ_G0025345) #24	Vsx1 (MGP_SPRETEiJ_G0025346) #26	Entpd6 (MGP_SPRETEiJ_G0025347) #27	Pygb (MGP_SPRETEiJ_G0025348) #28	Abhd12 (MGP_SPRETEiJ_G0025349) #29	Gins1 (MGP_SPRETEiJ_G0025350) #30	Ninl (MGP_SPRETEiJ_G0025351) #31	MGP_SPRETEiJ_G0025352 #32	MGP_SPRETEiJ_G0025353 #32	Nsfl1c (MGP_SPRETEiJ_G0025355)	MGP_SPRETEiJ_G0025356	Sdcbp2 (MGP_SPRETEiJ_G0025357)	Snph (MGP_SPRETEiJ_G0025358)	Rad21l (MGP_SPRETEiJ_G0025359)
Steppe mouse	MODERN SPECIES	123																ENSMSIG00000000728 #22	Apmap (ENSMSIG00000000755) #23	Acss1 (ENSMSIG00000000805) #24	Vsx1 (ENSMSIG00000000862) #26	Entpd6 (ENSMSIG00000000878) #27	Pygb (ENSMSIG00000000916) #28	Abhd12 (ENSMSIG00000001029) #29	Gins1 (ENSMSIG00000001076) #30	Ninl (ENSMSIG00000001119) #31	Nanp (ENSMSIG00000001191) #32
Ryukyu mouse	MODERN SPECIES	11	Nxt1 (MGP_CAROLIEiJ_G0024408)	Gzf1 (MGP_CAROLIEiJ_G0024409)	Napb (MGP_CAROLIEiJ_G0024410)	Cstl1 (MGP_CAROLIEiJ_G0024411) #9	Cst11 (MGP_CAROLIEiJ_G0024412) #10	Cstdc1 (MGP_CAROLIEiJ_G0024413) #11	Cst12 (MGP_CAROLIEiJ_G0024414) #12	Cst8 (MGP_CAROLIEiJ_G0024415) #13	Cst13 (MGP_CAROLIEiJ_G0024416) #14	Cst9 (MGP_CAROLIEiJ_G0024417) #16	Cstdc2 (MGP_CAROLIEiJ_G0024418) #15	Cst3 (MGP_CAROLIEiJ_G0024419) #17	Cst10 (MGP_CAROLIEiJ_G0024420) #19	Syndig1 (MGP_CAROLIEiJ_G0024421) #20	MGP_CAROLIEiJ_G0024422	Cst7 (MGP_CAROLIEiJ_G0024423) #22	Apmap (MGP_CAROLIEiJ_G0024424) #23	Acss1 (MGP_CAROLIEiJ_G0024425) #24	Vsx1 (MGP_CAROLIEiJ_G0024426) #26	Entpd6 (MGP_CAROLIEiJ_G0024427) #27	Pygb (MGP_CAROLIEiJ_G0024428) #28	Abhd12 (MGP_CAROLIEiJ_G0024429) #29	MGP_CAROLIEiJ_G0024430 #30	Ninl (MGP_CAROLIEiJ_G0024431) #31	MGP_CAROLIEiJ_G0024432 #32	MGP_CAROLIEiJ_G0024433 #32	Nsfl1c (MGP_CAROLIEiJ_G0024434)	MGP_CAROLIEiJ_G0024435	Sdcbp2 (MGP_CAROLIEiJ_G0024436)	Snph (MGP_CAROLIEiJ_G0024437)	Rad21l (MGP_CAROLIEiJ_G0024438)
Shrew mouse	MODERN SPECIES	16	Nxt1 (MGP_PahariEiJ_G0025851)	Gzf1 (MGP_PahariEiJ_G0025852)	Napb (MGP_PahariEiJ_G0025853)	Cstl1 (MGP_PahariEiJ_G0025854) #9	Cst11 (MGP_PahariEiJ_G0025855) #10	Cstdc1 (MGP_PahariEiJ_G0025856) #11	Cst12 (MGP_PahariEiJ_G0025857) #12	Cst8 (MGP_PahariEiJ_G0025858) #13	Cst13 (MGP_PahariEiJ_G0025859) #14	Cstdc2 (MGP_PahariEiJ_G0025860) #15	Cst3 (MGP_PahariEiJ_G0025861) #17	Cst10 (MGP_PahariEiJ_G0025862) #19	Syndig1 (MGP_PahariEiJ_G0025863) #20	MGP_PahariEiJ_G0025864	MGP_PahariEiJ_G0025865	Cst7 (MGP_PahariEiJ_G0025866) #22	Apmap (MGP_PahariEiJ_G0025867) #23	Acss1 (MGP_PahariEiJ_G0025868) #24	Vsx1 (MGP_PahariEiJ_G0025869) #26	Entpd6 (MGP_PahariEiJ_G0025870) #27	Pygb (MGP_PahariEiJ_G0025871) #28	Abhd12 (MGP_PahariEiJ_G0025872) #29	Gins1 (MGP_PahariEiJ_G0025873) #30	Ninl (MGP_PahariEiJ_G0025874) #31	MGP_PahariEiJ_G0025875 #32	MGP_PahariEiJ_G0025876 #32	Nsfl1c (MGP_PahariEiJ_G0025877)	MGP_PahariEiJ_G0025878	Sdcbp2 (MGP_PahariEiJ_G0025879)	Snph (MGP_PahariEiJ_G0025880)	Rad21l (MGP_PahariEiJ_G0025881)
Rat	MODERN SPECIES	13	AABR07027267.1 (ENSRNOG00000060618)	ENSRNOG00000070080	LOC100911984 (ENSRNOG00000064299)	LOC100362296 (ENSRNOG00000065228)	LOC102555578 (ENSRNOG00000065847)	LOC102555217 (ENSRNOG00000065630)	Rnaset2-ps1 (ENSRNOG00000005920)	LOC102555033 (ENSRNOG00000067040)	LOC102554315 (ENSRNOG00000067071)	AABR07054262.1 (ENSRNOG00000056526)	LOC102549291 (ENSRNOG00000069811)	ENSRNOG00000070867	ENSRNOG00000064151	LOC103690174 (ENSRNOG00000068068)	RGD1565143 (ENSRNOG00000055769)	Cst7 (ENSRNOG00000006767) #22	Apmap (ENSRNOG00000006795) #23	Acss1 (ENSRNOG00000007102) #24	Vsx1 (ENSRNOG00000042220) #26	Entpd6 (ENSRNOG00000007427) #27	Pygb (ENSRNOG00000007583) #28	Abhd12 (ENSRNOG00000036934) #29	Gins1 (ENSRNOG00000008091) #30	Ninl (ENSRNOG00000027747) #31	Nanp (ENSRNOG00000008307) #32	Nsfl1c (ENSRNOG00000008604)	Fkbp1a (ENSRNOG00000008822)	Sdcbp2 (ENSRNOG00000009528)	Snph (ENSRNOG00000009588)	Rad21l1 (ENSRNOG00000022335)	Tmem74b (ENSRNOG00000064442)
Upper Galilee mountains blind mole rat	MODERN SPECIES	689							Cst13 (ENSNGAG00000021135) #14	Cstdc2 (ENSNGAG00000020593) #15	Cst3 (ENSNGAG00000017018) #17	Cst10 (ENSNGAG00000009191) #19	Syndig1 (ENSNGAG00000006291) #20	Defb21 (ENSNGAG00000003549)	Defb19 (ENSNGAG00000001384)	ENSNGAG00000018092	Bpifb5 (ENSNGAG00000020339)	Cst7 (ENSNGAG00000014555) #22
Lesser Egyptian jerboa	MODERN SPECIES	149	Csnk2a1 (ENSJJAG00000012588)	Tcf15 (ENSJJAG00000010988)	Srxn1 (ENSJJAG00000009121)	Scrt2 (ENSJJAG00000001388)	Slc52a3 (ENSJJAG00000016352)	Fam110a (ENSJJAG00000004311)	Angpt4 (ENSJJAG00000005709)	Rspo4 (ENSJJAG00000018321)	ENSJJAG00000003196	Psmf1 (ENSJJAG00000013803)	Rad21l (ENSJJAG00000018022)	Snph (ENSJJAG00000009948)	Sdcbp2 (ENSJJAG00000022024)	ENSJJAG00000020158	Nsfl1c (ENSJJAG00000019288)	Cst7 (ENSJJAG00000015302) #22	Apmap (ENSJJAG00000012447) #23	Acss1 (ENSJJAG00000024008) #24	Vsx1 (ENSJJAG00000021822) #26	Entpd6 (ENSJJAG00000015511) #27	ENSJJAG00000010262	Pygb (ENSJJAG00000023294) #28	Abhd12 (ENSJJAG00000021468) #29	Gins1 (ENSJJAG00000016065) #30	ENSJJAG00000009691 #31	ENSJJAG00000021010 #31	ENSJJAG00000020337 #31	Nanp (ENSJJAG00000016600) #32	Syndig1 (ENSJJAG00000016150) #20
Kangaroo rat	MODERN SPECIES	418	Nkx2-4 (ENSDORG00000023542)	Nkx2-2 (ENSDORG00000007972)	Pax1 (ENSDORG00000016051)	Foxa2 (ENSDORG00000027269)	Sstr4 (ENSDORG00000010486)	Cd93 (ENSDORG00000028704)	Nxt1 (ENSDORG00000024690)	Gzf1 (ENSDORG00000011855)	Napb (ENSDORG00000011856)	Cst12 (ENSDORG00000023744) #12	Cst8 (ENSDORG00000011859) #13	Cst13 (ENSDORG00000027228) #14	Cst3 (ENSDORG00000027673) #17	ENSDORG00000008948 #19	Syndig1 (ENSDORG00000003111) #20	Cst7 (ENSDORG00000005298) #22	Apmap (ENSDORG00000025391) #23	Acss1 (ENSDORG00000004006) #24	Vsx1 (ENSDORG00000005490) #26	Entpd6 (ENSDORG00000007175) #27	Pygb (ENSDORG00000007176) #28	Abhd12 (ENSDORG00000007179) #29	ENSDORG00000010384 #30	Ninl (ENSDORG00000010386) #31	Nanp (ENSDORG00000029868) #32	ENSDORG00000005832	Mlh1 (ENSDORG00000005831)	Epm2aip1 (ENSDORG00000027253)	Trank1 (ENSDORG00000013295)	Dclk3 (ENSDORG00000029566)	Stac (ENSDORG00000005193)
Lagomorpha	ANCESTRAL SPECIES	248															ENSGT00950000183147.B #20	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT01100000263540.A.a #27	ENSGT00950000183148.b.b #28	ENSGT00940000160517 #29	ENSGT00390000013968 #30	ENSGT00660000095541.a.a #31	ENSGT00390000003094 #32
Pika	MODERN SPECIES	4000																ENSOPRG00000009654 #22	APMAP (ENSOPRG00000009670) #23	ACSS1 (ENSOPRG00000009689) #24
Rabbit	MODERN SPECIES	474														ENSOCUG00000026879	SYNDIG1 (ENSOCUG00000025498) #20	CST7 (ENSOCUG00000025268) #22	APMAP (ENSOCUG00000027493) #23	ACSS1 (ENSOCUG00000013125) #24	ENTPD6 (ENSOCUG00000015930) #27	PYGB (ENSOCUG00000002790) #28	ENSOCUG00000030064	ABHD12 (ENSOCUG00000002798) #29	ENSOCUG00000015747 #30	NINL (ENSOCUG00000006288) #31	NANP (ENSOCUG00000002927) #32	ENSOCUG00000024869	ENSOCUG00000029482	ORYCUNV1R1534 (ENSOCUG00000030661)	ENSOCUG00000039676	ENSOCUG00000039655	ORYCUNV1R1596 (ENSOCUG00000038955)