Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212	ENSGT00910000144356 #13	ENSGT00940000162636.B #14	ENSGT00940000165454 #15	ENSGT00940000162294 #16	ENSGT00940000163249 #17	ENSGT00940000161877.i #18	ENSGT00940000161877.j #19	ENSGT00940000154755 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a #29	ENSGT00950000182994.B.a.b.e.a.b #30	ENSGT00530000063735.b #31	ENSGT00940000160326 #32	ENSGT00950000183739	ENSGT00940000163406 #33	ENSGT00940000155849 #34	ENSGT00940000162594 #35	ENSGT00940000160568.m #36
Bovidae	ANCESTRAL SPECIES	10	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212	ENSGT00910000144356 #13	ENSGT00940000162636.B #14	ENSGT00940000165454 #15	ENSGT00940000162294 #16	ENSGT00940000163249 #17	ENSGT00940000161877.i #18	ENSGT00940000161877.j #19	ENSGT00940000154755 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a #29	ENSGT00950000182994.B.a.b.e.a.b.a #30	ENSGT00530000063735.b #31	ENSGT00940000160326 #32	ENSGT00950000183739	ENSGT00940000163406 #33	ENSGT00940000155849 #34	ENSGT00940000162594 #35	ENSGT00940000160568.m #36
Caprinae	ANCESTRAL SPECIES	23	ENSGT00940000156996 #9	ENSGT00950000183014.f.a.h.u.a.a.b.a #10	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212	ENSGT00910000144356 #13	ENSGT00940000162636.B #14	ENSGT00940000165454 #15	ENSGT00940000162294 #16	ENSGT00940000163249 #17	ENSGT00940000161877.i #18	ENSGT00940000161877.j #19	ENSGT00940000154755 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a #29	ENSGT00950000182994.B.a.b.e.a.b.a #30	ENSGT00530000063735.b #31	ENSGT00940000160326 #32	ENSGT00940000163406 #33	ENSGT00940000155849 #34	ENSGT00940000162594 #35	ENSGT00940000160568.m #36	ENSGT00940000153677.s.a.b.b #37
Goat	MODERN SPECIES	4	ENSCHIG00000022438 #7	THBD (ENSCHIG00000010975) #8	CD93 (ENSCHIG00000009092) #9	ENSCHIG00000021979 #10	GZF1 (ENSCHIG00000008882) #11	NAPB (ENSCHIG00000020249) #12	ENSCHIG00000021813 #13	ENSCHIG00000003642 #14	ENSCHIG00000017766 #15	ENSCHIG00000025947 #16	ENSCHIG00000021829 #17	ENSCHIG00000009930 #18	ENSCHIG00000022173 #19	CST3 (ENSCHIG00000009090) #20	SYNDIG1 (ENSCHIG00000020378) #21	CST7 (ENSCHIG00000021898) #22	APMAP (ENSCHIG00000013115) #23	ACSS1 (ENSCHIG00000021744) #24	VSX1 (ENSCHIG00000022900) #25	ENTPD6 (ENSCHIG00000013273) #26	PYGB (ENSCHIG00000025986) #27	ABHD12 (ENSCHIG00000021501) #28	ANKRD16 (ENSCHIG00000013205) #29	ENSCHIG00000026283 #30	TASOR2 (ENSCHIG00000014086) #31	ASB13 (ENSCHIG00000022650) #32	CALML5 (ENSCHIG00000009932) #33	NET1 (ENSCHIG00000004441) #34	TUBAL3 (ENSCHIG00000019472) #35	UCN3 (ENSCHIG00000007165) #36	ENSCHIG00000017096 #37
Rambouillet Sheep	MODERN SPECIES	182																ENSOARG00020018916 #22
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554 #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212	ENSGT00910000144356 #13	ENSGT00940000162636.B #14	ENSGT00940000165454 #15	ENSGT00940000162294 #16	ENSGT00940000163249 #17	ENSGT00940000161877.j #19	ENSGT00940000154755 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a #29	ENSGT00950000182994.B.a.b.e.b ##30	ENSGT00950000182994.B.a.b.e.a.b.a #30	ENSGT00530000063735.b #31	ENSGT00940000160326 #32	ENSGT00950000183739	ENSGT00940000163406 #33	ENSGT00940000155849 #34	ENSGT00940000162594 #35
Bos	ANCESTRAL SPECIES	22	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554.jb #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212	ENSGT00910000144356 #13	ENSGT00940000162636.B #14	ENSGT00940000165454 #15	ENSGT00940000162294 #16	ENSGT00940000163249 #17	ENSGT00940000161877.j #19	ENSGT00940000154755 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a #29	ENSGT00950000182994.B.a.b.e.b ##30	ENSGT00390000003289.g.b	ENSGT00950000182994.B.a.b.e.a.b.b.b ##30	ENSGT00530000063735.b #31	ENSGT00940000160326 #32	ENSGT00950000183739	ENSGT00940000163406 #33	ENSGT00940000155849 #34
Bos_a	ANCESTRAL SPECIES	7	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554.jb #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212	ENSGT00910000144356 #13	ENSGT00940000162636.B #14	ENSGT00940000165454 #15	ENSGT00940000162294 #16	ENSGT00940000163249 #17	ENSGT00940000161877.j #19	ENSGT00940000154755 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a #29	ENSGT00950000182994.B.a.b.e.b ##30	ENSGT00390000003289.g.b	ENSGT00950000182994.B.a.b.e.a.b.b.b ##30	ENSGT00530000063735.b #31	ENSGT00940000160326 #32	ENSGT00950000183739	ENSGT00940000163406 #33	ENSGT00940000155849 #34
Wild yak	MODERN SPECIES	1228															SYNDIG1 (ENSBMUG00000005390) #21	CST7 (ENSBMUG00000005404) #22	ENSBMUG00000005410 #23
Domestic yak	MODERN SPECIES	3	CD93 (ENSBGRG00000006986) #9	ENSBGRG00000007043	NXT1 (ENSBGRG00000007076)	ENSBGRG00000007097 #11	ENSBGRG00000007150 #11	NAPB (ENSBGRG00000007201) #12	CSTL1 (ENSBGRG00000007456)	ENSBGRG00000007520 #13	ENSBGRG00000007612 #14	ENSBGRG00000007655 #15	CST8 (ENSBGRG00000007704) #16	ENSBGRG00000007774 #17	ENSBGRG00000007806 #19	CST3 (ENSBGRG00000007838) #20	SYNDIG1 (ENSBGRG00000007905) #21	CST7 (ENSBGRG00000008014) #22	APMAP (ENSBGRG00000008063) #23	ACSS1 (ENSBGRG00000008277) #24	VSX1 (ENSBGRG00000008489) #25	ENTPD6 (ENSBGRG00000008602) #26	PYGB (ENSBGRG00000008678) #27	ABHD12 (ENSBGRG00000008988) #28	ANKRD16 (ENSBGRG00000009203) #29	ENSBGRG00000009324	ENSBGRG00000009364 ##30	TASOR2 (ENSBGRG00000009524) #31	ASB13 (ENSBGRG00000010215) #32	NET1 (ENSBGRG00000010362) #34	TUBAL3 (ENSBGRG00000010624) #35	UCN3 (ENSBGRG00000010758) #36	ENSBGRG00000010844 ##37
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000155999	ENSGT00940000163276 #8	ENSGT00940000156996 #9	ENSGT00940000162041	ENSGT00870000136554.jb #11	ENSGT00390000005826.a.b #12	ENSGT00900000141212	ENSGT00910000144356 #13	ENSGT00940000162636.B #14	ENSGT00940000165454 #15	ENSGT00940000162294 #16	ENSGT00940000163249 #17	ENSGT00940000161877.j #19	ENSGT00940000154755 #20	ENSGT00950000183147.B #21	ENSGT00940000160277 #22	ENSGT00440000039984.a #23	ENSGT00940000158550 #24	ENSGT00940000160793 #25	ENSGT01100000263540.A.a #26	ENSGT00950000183148.b.b #27	ENSGT00940000160517 #28	ENSGT00940000153969.a #29	ENSGT00390000003289.g.b	ENSGT00950000182994.B.a.b.e.a.b.b.b ##30	ENSGT00950000182994.B.a.b.e.a.b.a #30	ENSGT00530000063735.b #31	ENSGT00940000160326 #32	ENSGT00940000163406 #33	ENSGT00940000155849 #34	ENSGT00940000162594 #35
Hybrid Bos Indicus	MODERN SPECIES	4	THBD (ENSBIXG00005010640) #8	ENSBIXG00005000916	CD93 (ENSBIXG00005010666) #9	NXT1 (ENSBIXG00005010690)	GZF1 (ENSBIXG00005010698) #11	NAPB (ENSBIXG00005000942) #12	ENSBIXG00005000943	ENSBIXG00005010800 #13	ENSBIXG00005000950 #14	ENSBIXG00005010816 #15	CST8 (ENSBIXG00005006779) #16	ENSBIXG00005000954 #17	ENSBIXG00005010849 #19	ENSBIXG00005010878 #20	SYNDIG1 (ENSBIXG00005010911) #21	CST7 (ENSBIXG00005000982) #22	APMAP (ENSBIXG00005010989) #23	ACSS1 (ENSBIXG00005011033) #24	VSX1 (ENSBIXG00005011089) #25	ENTPD6 (ENSBIXG00005011132) #26	PYGB (ENSBIXG00005011231) #27	ABHD12 (ENSBIXG00005011264) #28	ANKRD16 (ENSBIXG00005011301) #29	ENSBIXG00005011317	ENSBIXG00005011350 ##30	TASOR2 (ENSBIXG00005011497) #31	ASB13 (ENSBIXG00005001128) #32	NET1 (ENSBIXG00005001148) #34	TUBAL3 (ENSBIXG00005011711) #35	UCN3 (ENSBIXG00005011732) #36	ENSBIXG00005011761 ##37
Cow	MODERN SPECIES	4	ENSBTAG00000035643	PAX1 (ENSBTAG00000006742)	FOXA2 (ENSBTAG00000012407)	THBD (ENSBTAG00000048591) #8	CD93 (ENSBTAG00000004207) #9	NXT1 (ENSBTAG00000004993)	GZF1 (ENSBTAG00000008908) #11	NAPB (ENSBTAG00000032704) #12	ENSBTAG00000027420 #15	MGC133636 (ENSBTAG00000013416) #14	CST8 (ENSBTAG00000032694) #16	ENSBTAG00000015949 #17	ENSBTAG00000032687 #19	CST3 (ENSBTAG00000000598) #20	SYNDIG1 (ENSBTAG00000040147) #21	CST7 (ENSBTAG00000004273) #22	APMAP (ENSBTAG00000004278) #23	ACSS1 (ENSBTAG00000004281) #24	VSX1 (ENSBTAG00000003335) #25	ENTPD6 (ENSBTAG00000009881) #26	PYGB (ENSBTAG00000004625) #27	ABHD12 (ENSBTAG00000001420) #28	ANKRD16 (ENSBTAG00000039071) #29	ENSBTAG00000035572	GDI2 (ENSBTAG00000005316) #30	TASOR2 (ENSBTAG00000019197) #31	ASB13 (ENSBTAG00000018805) #32	CALML5 (ENSBTAG00000013854) #33	NET1 (ENSBTAG00000007648) #34	TUBAL3 (ENSBTAG00000017740) #35	UCN3 (ENSBTAG00000035696) #36
American bison	MODERN SPECIES	2997	PAX1 (ENSBBBG00000022763)	FOXA2 (ENSBBBG00000022700)	THBD (ENSBBBG00000022684) #8	CD93 (ENSBBBG00000005967) #9	GZF1 (ENSBBBG00000022655) #11	NAPB (ENSBBBG00000022632) #12	CSTL1 (ENSBBBG00000022543)	ENSBBBG00000022535 #13	ENSBBBG00000022528 #14	ENSBBBG00000005942 #15	CST8 (ENSBBBG00000022516) #16	ENSBBBG00000022506 #17	ENSBBBG00000022502 #19	CST3 (ENSBBBG00000005938) #20	SYNDIG1 (ENSBBBG00000022490) #21	ENSBBBG00000022484 #22	APMAP (ENSBBBG00000005932) #23	ACSS1 (ENSBBBG00000022438) #24	ENSBBBG00000022411	VSX1 (ENSBBBG00000022405) #25	ENTPD6 (ENSBBBG00000022389) #26	PYGB (ENSBBBG00000022349) #27	ABHD12 (ENSBBBG00000022329) #28	ANKRD16 (ENSBBBG00000022315) #29	ENSBBBG00000022296	ENSBBBG00000022269	ENSBBBG00000022254 #30	TASOR2 (ENSBBBG00000022161) #31	ASB13 (ENSBBBG00000022092) #32	ENSBBBG00000022078	CALML5 (ENSBBBG00000022070) #33
Siberian musk deer	MODERN SPECIES	1194	FOXA2 (ENSMMSG00000018910)	THBD (ENSMMSG00000018897) #8	CD93 (ENSMMSG00000018871) #9	NXT1 (ENSMMSG00000018866)	GZF1 (ENSMMSG00000018836) #11	NAPB (ENSMMSG00000018763) #12	CSTL1 (ENSMMSG00000018731)	ENSMMSG00000018712 #13	ENSMMSG00000018676 #14	ENSMMSG00000018653 #15	CST8 (ENSMMSG00000018626) #16	ENSMMSG00000018603 #17	ENSMMSG00000018584 #19	CST3 (ENSMMSG00000018564) #20	SYNDIG1 (ENSMMSG00000018548) #21	CST7 (ENSMMSG00000018529) #22	APMAP (ENSMMSG00000018481) #23	ACSS1 (ENSMMSG00000018444) #24	VSX1 (ENSMMSG00000018374) #25	ENTPD6 (ENSMMSG00000018269) #26	PYGB (ENSMMSG00000018208) #27	ABHD12 (ENSMMSG00000018158) #28	ANKRD16 (ENSMMSG00000018094) #29	ENSMMSG00000017856 #30	TASOR2 (ENSMMSG00000017630) #31	ASB13 (ENSMMSG00000017589) #32	ENSMMSG00000017556 #33	NET1 (ENSMMSG00000017503) #34	TUBAL3 (ENSMMSG00000017448) #35	UCN3 (ENSMMSG00000017437) #36	ENSMMSG00000017397 ##37