Murinae	ANCESTRAL SPECIES	6	ENSGT00390000011216	ENSGT00640000091565 #7	ENSGT00940000158217 #8	ENSGT00390000004836 #9	ENSGT00940000159664 #10	ENSGT00940000161624 #11	ENSGT00390000007792.k #12	ENSGT00950000183213.a.b #13	ENSGT00390000007792.l #14	ENSGT00940000160624 #15	ENSGT00940000154208.c.b #16	ENSGT00940000153496.a.b #17	ENSGT00940000162213 #18	ENSGT00940000161569 #20	ENSGT00940000153840.a.a #21	ENSGT00440000033919 #22	ENSGT00940000155223.b #23	ENSGT00940000163180 #24	ENSGT00940000160240 #25	ENSGT00390000007512 #26	ENSGT00390000002226 #27	ENSGT00940000156555 #28	ENSGT00940000157428 #29	ENSGT00980000198588	ENSGT00940000154322.A #30	ENSGT00940000156843 #31	ENSGT00940000159856 #32	ENSGT00940000163071 #33	ENSGT00390000006009.a.a.a #34	ENSGT00390000006555 #35	ENSGT00940000158604 #36
Mus	ANCESTRAL SPECIES	2	ENSGT00390000011216	ENSGT00640000091565 #7	ENSGT00940000158217 #8	ENSGT00390000004836 #9	ENSGT00940000159664 #10	ENSGT00940000161624 #11	ENSGT00390000007792.k #12	ENSGT00950000183213.a.b #13	ENSGT00390000007792.l #14	ENSGT00940000160624 #15	ENSGT00940000154208.c.b #16	ENSGT00940000153496.a.b #17	ENSGT00940000162213 #18	ENSGT00940000161569 #20	ENSGT00940000153840.a.a #21	ENSGT00440000033919 #22	ENSGT00940000155223.b #23	ENSGT00940000163180 #24	ENSGT00940000160240 #25	ENSGT00390000007512 #26	ENSGT00390000002226 #27	ENSGT00940000156555 #28	ENSGT00940000157428 #29	ENSGT00940000154322.A #30	ENSGT00940000156843 #31	ENSGT00940000159856 #32	ENSGT00940000163071 #33	ENSGT00390000006009.a.a.a #34	ENSGT00390000006555 #35	ENSGT00940000158604 #36	ENSGT00940000160741 #37
Mus_A	ANCESTRAL SPECIES	2	ENSGT00640000091565 #7	ENSGT00940000158217 #8	ENSGT00390000004836 #9	ENSGT00940000159664 #10	ENSGT00940000161624 #11	ENSGT00390000007792.k.e #12	ENSGT00950000183213.a.b #13	ENSGT00390000007792.l #14	ENSGT00940000160624 #15	ENSGT00940000154208.c.b #16	ENSGT00940000153496.a.b #17	ENSGT00940000162213 #18	ENSGT00940000163317 #19	ENSGT00940000161569.c #20	ENSGT00940000153840.a.a #21	ENSGT00440000033919 #22	ENSGT00940000155223.b #23	ENSGT00940000163180 #24	ENSGT00940000160240 #25	ENSGT00390000007512.q #26	ENSGT00390000002226 #27	ENSGT00940000156555 #28	ENSGT00940000157428 #29	ENSGT00940000154322.A #30	ENSGT00940000156843 #31	ENSGT00940000159856 #32	ENSGT00940000163071 #33	ENSGT00390000006009.a.a.a #34	ENSGT00390000006555 #35	ENSGT00940000158604 #36	ENSGT00940000160741 #37
Ryukyu mouse	MODERN SPECIES	2	Mycbpap (MGP_CAROLIEiJ_G0016983) #7	Epn3 (MGP_CAROLIEiJ_G0016982) #8	Spata20 (MGP_CAROLIEiJ_G0016981) #9	Cacna1g (MGP_CAROLIEiJ_G0016980) #10	Abcc3 (MGP_CAROLIEiJ_G0016979) #11	Ankrd40 (MGP_CAROLIEiJ_G0016978) #12	Luc7l3 (MGP_CAROLIEiJ_G0016977) #13	MGP_CAROLIEiJ_G0016976 #14	Wfikkn2 (MGP_CAROLIEiJ_G0016975) #15	Tob1 (MGP_CAROLIEiJ_G0016974) #16	Spag9 (MGP_CAROLIEiJ_G0016973) #17	Nme1 (MGP_CAROLIEiJ_G0016972) #18	MGP_CAROLIEiJ_G0016971 #19	Nme2 (MGP_CAROLIEiJ_G0016970) #20	Mbtd1 (MGP_CAROLIEiJ_G0016969) #21	Utp18 (MGP_CAROLIEiJ_G0016968) #22	Car10 (MGP_CAROLIEiJ_G0016967) #23	Kif2b (MGP_CAROLIEiJ_G0016966) #24	Tom1l1 (MGP_CAROLIEiJ_G0016965) #25	Cox11 (MGP_CAROLIEiJ_G0016964) #26	Stxbp4 (MGP_CAROLIEiJ_G0016963) #27	Hlf (MGP_CAROLIEiJ_G0016962) #28	Mmd (MGP_CAROLIEiJ_G0016961) #29	Tmem100 (MGP_CAROLIEiJ_G0016960) #30	Pctp (MGP_CAROLIEiJ_G0016959) #31	MGP_CAROLIEiJ_G0016958 #32	MGP_CAROLIEiJ_G0016957 #33	Nog (MGP_CAROLIEiJ_G0016956) #34	Gm525 (MGP_CAROLIEiJ_G0016955) #35	Dgke (MGP_CAROLIEiJ_G0016954) #36	Trim25 (MGP_CAROLIEiJ_G0016953) #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00640000091565 #7	ENSGT00940000158217 #8	ENSGT00390000004836 #9	ENSGT00940000159664 #10	ENSGT00940000161624 #11	ENSGT00390000007792.k.e #12	ENSGT00950000183213.a.b #13	ENSGT00390000007792.l #14	ENSGT00940000160624 #15	ENSGT00940000154208.c.b #16	ENSGT00940000153496.a.b #17	ENSGT00940000162213 #18	ENSGT00940000163317 #19	ENSGT00940000161569.c #20	ENSGT00940000153840.a.a #21	ENSGT00440000033919 #22	ENSGT00940000155223.b #23	ENSGT00940000163180 #24	ENSGT00940000160240 #25	ENSGT00390000007512.q #26	ENSGT00390000002226 #27	ENSGT00940000156555 #28	ENSGT00940000157428 #29	ENSGT00940000154322.A #30	ENSGT00940000156843 #31	ENSGT00940000159856 #32	ENSGT00940000163071 #33	ENSGT00390000006009.a.a.a #34	ENSGT00390000006555 #35	ENSGT00940000158604 #36	ENSGT00940000160741 #37
Mus_C	ANCESTRAL SPECIES	3	ENSGT00640000091565 #7	ENSGT00940000158217 #8	ENSGT00390000004836 #9	ENSGT00940000159664 #10	ENSGT00940000161624 #11	ENSGT00390000007792.k.e #12	ENSGT00950000183213.a.b #13	ENSGT00390000007792.l #14	ENSGT00940000160624 #15	ENSGT00940000154208.c.b #16	ENSGT00940000153496.a.b #17	ENSGT00940000162213 #18	ENSGT00940000163317 #19	ENSGT00940000161569.c #20	ENSGT00940000153840.a.a #21	ENSGT00440000033919 #22	ENSGT00940000155223.b #23	ENSGT00940000163180 #24	ENSGT00940000160240 #25	ENSGT00390000007512.q #26	ENSGT00390000002226 #27	ENSGT00940000156555 #28	ENSGT00940000157428 #29	ENSGT00940000154322.A #30	ENSGT00940000156843 #31	ENSGT00940000159856 #32	ENSGT00940000163071 #33	ENSGT00390000006009.a.a.a #34	ENSGT00390000006555 #35	ENSGT00940000158604 #36	ENSGT00940000160741 #37
Steppe mouse	MODERN SPECIES	3074	Acsf2 (ENSMSIG00000014533)	Rsad1 (ENSMSIG00000014491)	Mycbpap (ENSMSIG00000014428) #7	Epn3 (ENSMSIG00000014391) #8	Spata20 (ENSMSIG00000014363) #9	Cacna1g (ENSMSIG00000007636) #10	Abcc3 (ENSMSIG00000007369) #11	Ankrd40 (ENSMSIG00000007263) #12	Luc7l3 (ENSMSIG00000007180) #13	Ankrd40cl (ENSMSIG00000007162) #14	Wfikkn2 (ENSMSIG00000007145) #15	Tob1 (ENSMSIG00000007131) #16	Spag9 (ENSMSIG00000006671) #17	ENSMSIG00000006602 #18	Mbtd1 (ENSMSIG00000006207) #21	Utp18 (ENSMSIG00000006126) #22	Car10 (ENSMSIG00000006012) #23
spretus	MODERN SPECIES	2	Mycbpap (MGP_SPRETEiJ_G0017829) #7	Epn3 (MGP_SPRETEiJ_G0017828) #8	Spata20 (MGP_SPRETEiJ_G0017827) #9	Cacna1g (MGP_SPRETEiJ_G0017826) #10	Abcc3 (MGP_SPRETEiJ_G0017825) #11	Ankrd40 (MGP_SPRETEiJ_G0017824) #12	Luc7l3 (MGP_SPRETEiJ_G0017823) #13	Ankrd40cl (MGP_SPRETEiJ_G0017822) #14	Wfikkn2 (MGP_SPRETEiJ_G0017821) #15	Tob1 (MGP_SPRETEiJ_G0017820) #16	Spag9 (MGP_SPRETEiJ_G0017819) #17	Nme1 (MGP_SPRETEiJ_G0017818) #18	MGP_SPRETEiJ_G0017817 #19	Nme2 (MGP_SPRETEiJ_G0017816) #20	MGP_SPRETEiJ_G0017815 #21	Utp18 (MGP_SPRETEiJ_G0017814) #22	Car10 (MGP_SPRETEiJ_G0017813) #23	Kif2b (MGP_SPRETEiJ_G0017812) #24	Tom1l1 (MGP_SPRETEiJ_G0017811) #25	Cox11 (MGP_SPRETEiJ_G0017810) #26	Stxbp4 (MGP_SPRETEiJ_G0017809) #27	Hlf (MGP_SPRETEiJ_G0017808) #28	Mmd (MGP_SPRETEiJ_G0017807) #29	Tmem100 (MGP_SPRETEiJ_G0017806) #30	Pctp (MGP_SPRETEiJ_G0017805) #31	MGP_SPRETEiJ_G0017804 #32	MGP_SPRETEiJ_G0017803 #33	Nog (MGP_SPRETEiJ_G0017802) #34	Gm525 (MGP_SPRETEiJ_G0017801) #35	Dgke (MGP_SPRETEiJ_G0017800) #36	Trim25 (MGP_SPRETEiJ_G0017799) #37
Mouse	MODERN SPECIES	2	Mycbpap (ENSMUSG00000039110) #7	Epn3 (ENSMUSG00000010080) #8	Spata20 (ENSMUSG00000020867) #9	Cacna1g (ENSMUSG00000020866) #10	Abcc3 (ENSMUSG00000020865) #11	Ankrd40 (ENSMUSG00000020864) #12	Luc7l3 (ENSMUSG00000020863) #13	Ankrd40cl (ENSMUSG00000094091) #14	Wfikkn2 (ENSMUSG00000044177) #15	Tob1 (ENSMUSG00000037573) #16	Spag9 (ENSMUSG00000020859) #17	Nme1 (ENSMUSG00000037601) #18	Gm20390 (ENSMUSG00000091228)	Nme2 (ENSMUSG00000020857) #20	Mbtd1 (ENSMUSG00000059474) #21	Utp18 (ENSMUSG00000054079) #22	Car10 (ENSMUSG00000056158) #23	Kif2b (ENSMUSG00000046755) #24	Tom1l1 (ENSMUSG00000020541) #25	Cox11 (ENSMUSG00000020544) #26	Stxbp4 (ENSMUSG00000020546) #27	Hlf (ENSMUSG00000003949) #28	Mmd (ENSMUSG00000003948) #29	Smim36 (ENSMUSG00000110344)	Tmem100 (ENSMUSG00000069763) #30	Pctp (ENSMUSG00000020553) #31	Ankfn1 (ENSMUSG00000047773) #32	Nog (ENSMUSG00000048616) #34	Gm525 (ENSMUSG00000072553) #35	Dgke (ENSMUSG00000000276) #36	Trim25 (ENSMUSG00000000275) #37
Shrew mouse	MODERN SPECIES	5	Mycbpap (MGP_PahariEiJ_G0018114) #7	Epn3 (MGP_PahariEiJ_G0018113) #8	Spata20 (MGP_PahariEiJ_G0018112) #9	Cacna1g (MGP_PahariEiJ_G0018111) #10	Abcc3 (MGP_PahariEiJ_G0018110) #11	Ankrd40 (MGP_PahariEiJ_G0018109) #12	Luc7l3 (MGP_PahariEiJ_G0018108) #13	MGP_PahariEiJ_G0018107 #14	Wfikkn2 (MGP_PahariEiJ_G0018106) #15	Tob1 (MGP_PahariEiJ_G0018105) #16	Spag9 (MGP_PahariEiJ_G0018104) #17	MGP_PahariEiJ_G0018103 #18	MGP_PahariEiJ_G0018102 #18	Nme2 (MGP_PahariEiJ_G0018101) #20	Mbtd1 (MGP_PahariEiJ_G0018100) #21	Utp18 (MGP_PahariEiJ_G0018099) #22	Car10 (MGP_PahariEiJ_G0018098) #23	Kif2b (MGP_PahariEiJ_G0018097) #24	Tom1l1 (MGP_PahariEiJ_G0018096) #25	Cox11 (MGP_PahariEiJ_G0018095) #26	Stxbp4 (MGP_PahariEiJ_G0018094) #27	Hlf (MGP_PahariEiJ_G0018093) #28	Mmd (MGP_PahariEiJ_G0018092) #29	Tmem100 (MGP_PahariEiJ_G0018091) #30	Pctp (MGP_PahariEiJ_G0018090) #31	MGP_PahariEiJ_G0018089 #32	MGP_PahariEiJ_G0018088 #33	Nog (MGP_PahariEiJ_G0018087) #34	Gm525 (MGP_PahariEiJ_G0018086) #35	Dgke (MGP_PahariEiJ_G0018085) #36	Trim25 (MGP_PahariEiJ_G0018084) #37
Rat	MODERN SPECIES	1	Rsad1 (ENSRNOG00000065974)	Mycbpap (ENSRNOG00000042912) #7	Epn3 (ENSRNOG00000003284) #8	Spata20 (ENSRNOG00000003273) #9	Cacna1g (ENSRNOG00000060528) #10	Abcc3 (ENSRNOG00000002948) #11	Ankrd40 (ENSRNOG00000002935) #12	Luc7l3 (ENSRNOG00000002835) #13	Ankrd40cl (ENSRNOG00000045669) #14	Wfikkn2 (ENSRNOG00000002831) #15	Tob1 (ENSRNOG00000002828) #16	Spag9 (ENSRNOG00000002749) #17	Nme1 (ENSRNOG00000002693) #18	Nme2 (ENSRNOG00000002671) #20	Mbtd1 (ENSRNOG00000049988) #21	Utp18 (ENSRNOG00000002644) #22	Tmsb10-ps6 (ENSRNOG00000036921)	LOC100911361 (ENSRNOG00000027006)	Car10 (ENSRNOG00000002626) #23	LOC100363469 (ENSRNOG00000031579)	AABR07013200.1 (ENSRNOG00000030491)	Tom1l1 (ENSRNOG00000002474) #25	Cox11 (ENSRNOG00000052096) #26	Stxbp4 (ENSRNOG00000032768) #27	Hlf (ENSRNOG00000067479) #28	Mmd (ENSRNOG00000002436) #29	Smim36 (ENSRNOG00000069860)	Tmem100 (ENSRNOG00000002434) #30	Pctp (ENSRNOG00000002425) #31	Ankfn1 (ENSRNOG00000064511) #32	Nog (ENSRNOG00000023683) #34