Amniota	ANCESTRAL SPECIES	34	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT01100000263504.a.b.a.b.a.b	ENSGT01090000260005.a.b.a.b.b	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000161901	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00390000014139	ENSGT00390000014682	ENSGT00940000170834	ENSGT00940000161445	ENSGT00440000037341.b.b	ENSGT00940000159883	ENSGT00940000155288.b	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000159343	ENSGT00940000160378	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000162381	ENSGT00940000157514.a
Mammalia	ANCESTRAL SPECIES	48	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00390000014139	ENSGT00390000014682	ENSGT00940000170834	ENSGT00940000161445	ENSGT00440000037341.b.a.l	ENSGT00940000159883	ENSGT00940000155288.b	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000159343	ENSGT00940000161901	ENSGT00940000155398	ENSGT00940000160378	ENSGT00940000159610
Theria	ANCESTRAL SPECIES	27	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Eutheria	ANCESTRAL SPECIES	29	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000166546	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000166546	ENSGT00960000191916	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37
Felidae	ANCESTRAL SPECIES	7	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069.g #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Panthera	ANCESTRAL SPECIES	20	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069.g #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Panthera_a	ANCESTRAL SPECIES	22	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069.g #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
leopard	MODERN SPECIES	103	CARD8 (ENSPPRG00000023659) #7	ZSWIM9 (ENSPPRG00000024003) #8	LIG1 (ENSPPRG00000018056) #9	CABP5 (ENSPPRG00000010847) #10	ENSPPRG00000010583 #11	BSPH1 (ENSPPRG00000010439) #12	ENSPPRG00000009639 #13	CRX (ENSPPRG00000009458) #14	ENSPPRG00000009309 #15	NOP53 (ENSPPRG00000008954) #16	EHD2 (ENSPPRG00000008148) #17	ZNF541 (ENSPPRG00000006351) #18	NAPA (ENSPPRG00000005495) #19	KPTN (ENSPPRG00000004578) #20	SLC8A2 (ENSPPRG00000003527) #21	MEIS3 (ENSPPRG00000003182) #22	DHX34 (ENSPPRG00000002535) #23	C5AR2 (ENSPPRG00000015739) #24	C5AR1 (ENSPPRG00000015726) #25	INAFM1 (ENSPPRG00000015681) #26	CCDC9 (ENSPPRG00000001198) #27	BBC3 (ENSPPRG00000000897) #28	SAE1 (ENSPPRG00000000641) #29	ZC3H4 (ENSPPRG00000023272) #30	TMEM160 (ENSPPRG00000023643) #31	NPAS1 (ENSPPRG00000023743) #32	ARHGAP35 (ENSPPRG00000024753) #33	AP2S1 (ENSPPRG00000022307) #34	ENSPPRG00000019101 #35	SLC1A5 (ENSPPRG00000017631) #36	FKRP (ENSPPRG00000015401) #37
lion	MODERN SPECIES	15	ZSWIM9 (ENSPLOG00000007613) #8	LIG1 (ENSPLOG00000007402) #9	CABP5 (ENSPLOG00000007311) #10	ELSPBP1 (ENSPLOG00000007259) #11	BSPH1 (ENSPLOG00000007225) #12	ENSPLOG00000007210 #13	CRX (ENSPLOG00000007195) #14	SELENOW (ENSPLOG00000007177) #15	NOP53 (ENSPLOG00000007129) #16	ENSPLOG00000007108 #17	BICRA (ENSPLOG00000007084)	ZNF541 (ENSPLOG00000007040) #18	NAPA (ENSPLOG00000006967) #19	KPTN (ENSPLOG00000006920) #20	SLC8A2 (ENSPLOG00000006887) #21	MEIS3 (ENSPLOG00000006810) #22	DHX34 (ENSPLOG00000006682) #23	C5AR2 (ENSPLOG00000006656) #24	C5AR1 (ENSPLOG00000006646) #25	INAFM1 (ENSPLOG00000006630) #26	CCDC9 (ENSPLOG00000006569) #27	BBC3 (ENSPLOG00000006527) #28	SAE1 (ENSPLOG00000006483) #29	ZC3H4 (ENSPLOG00000006441) #30	ENSPLOG00000006416 #31	NPAS1 (ENSPLOG00000006360) #32	ARHGAP35 (ENSPLOG00000006320) #33	AP2S1 (ENSPLOG00000006172) #35	ENSPLOG00000006107 #36	FKRP (ENSPLOG00000006088) #37	STRN4 (ENSPLOG00000006025)
Tiger	MODERN SPECIES	36	ENSPTIG00000014657	CARD8 (ENSPTIG00000013121) #7	ENSPTIG00000012590 #8	LIG1 (ENSPTIG00000006127) #9	CABP5 (ENSPTIG00000004572) #10	ENSPTIG00000002518 #11	BSPH1 (ENSPTIG00000021843) #12	ENSPTIG00000021675 #13	ENSPTIG00000021571	ENSPTIG00000018779 #15	EHD2 (ENSPTIG00000018608) #17	ZNF541 (ENSPTIG00000014919) #18	NAPA (ENSPTIG00000012945) #19	ENSPTIG00000012410 #20	ENSPTIG00000011113 #21	MEIS3 (ENSPTIG00000019415) #22	DHX34 (ENSPTIG00000018435) #23	C5AR1 (ENSPTIG00000000446) #25	ENSPTIG00000016579	SAE1 (ENSPTIG00000016036) #29	ZC3H4 (ENSPTIG00000014229) #30	ENSPTIG00000013620 #32	ARHGAP35 (ENSPTIG00000013260) #33	ENSPTIG00000012880 #35	SLC1A5 (ENSPTIG00000011531) #36	STRN4 (ENSPTIG00000005381)	PRKD2 (ENSPTIG00000018488)	ENSPTIG00000017935	GNG8 (ENSPTIG00000017646)	ENSPTIG00000017515	ENSPTIG00000015079
Cat	MODERN SPECIES	246	CARD8 (ENSFCAG00000023335) #7	ZSWIM9 (ENSFCAG00000045504) #8	LIG1 (ENSFCAG00000007411) #9	CABP5 (ENSFCAG00000007410) #10	ELSPBP1 (ENSFCAG00000010611) #11	ENSFCAG00000039201 #13	ENSFCAG00000045134 #14	SELENOW (ENSFCAG00000015176) #15	NOP53 (ENSFCAG00000010861) #16	EHD2 (ENSFCAG00000029117) #17	BICRA (ENSFCAG00000027050)	ZNF541 (ENSFCAG00000028959) #18	NAPA (ENSFCAG00000006151) #19	KPTN (ENSFCAG00000006149) #20	SLC8A2 (ENSFCAG00000029230) #21	MEIS3 (ENSFCAG00000006146) #22	DHX34 (ENSFCAG00000006144) #23	C5AR2 (ENSFCAG00000043336) #24	C5AR1 (ENSFCAG00000046725) #25	CCDC9 (ENSFCAG00000004837) #27	BBC3 (ENSFCAG00000040792) #28	SAE1 (ENSFCAG00000027112) #29	ZC3H4 (ENSFCAG00000004835) #30	ENSFCAG00000032417 #31	NPAS1 (ENSFCAG00000004833) #32	ARHGAP35 (ENSFCAG00000004831) #33	AP2S1 (ENSFCAG00000031554) #35	SLC1A5 (ENSFCAG00000005736) #36	FKRP (ENSFCAG00000024153) #37	STRN4 (ENSFCAG00000000782)	PRKD2 (ENSFCAG00000010311)
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Ursidae	ANCESTRAL SPECIES	30	ENSGT00940000167541	ENSGT00940000157783 #9	ENSGT00940000160506.d #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634.h #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a.x #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.d #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Ursus	ANCESTRAL SPECIES	13	ENSGT00830000128447 #7	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506.d #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634.h #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00390000005826.a.a.x #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00550000075007.d #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00950000183095.a.b.a.b.a.h.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b
American black bear	MODERN SPECIES	1824												NAPA (ENSUAMG00000020183) #19	ENSUAMG00000020184 #20	KPTN (ENSUAMG00000020185) #20	SLC8A2 (ENSUAMG00000020186) #21	MEIS3 (ENSUAMG00000020187) #22	ENSUAMG00000020188	DHX34 (ENSUAMG00000020189) #23
Polar bear	MODERN SPECIES	115	CARD8 (ENSUMAG00000023856) #7	ENSUMAG00000023850	LIG1 (ENSUMAG00000023845) #9	CABP5 (ENSUMAG00000023843) #10	ELSPBP1 (ENSUMAG00000023840) #11	BSPH1 (ENSUMAG00000023839) #12	ENSUMAG00000023838 #13	CRX (ENSUMAG00000023837) #14	SELENOW (ENSUMAG00000023836) #15	ENSUMAG00000023832 #16	ENSUMAG00000023830 #17	ENSUMAG00000023829 #17	NAPA (ENSUMAG00000023811) #19	KPTN (ENSUMAG00000023806) #20	ENSUMAG00000023803 #21	MEIS3 (ENSUMAG00000023795) #22	C5AR1 (ENSUMAG00000023780) #25	CCDC9 (ENSUMAG00000023773) #27	SAE1 (ENSUMAG00000023769) #29	ENSUMAG00000023768 #30	ENSUMAG00000023763 #32	ARHGAP35 (ENSUMAG00000023756) #33	ENSUMAG00000023753 #35	ENSUMAG00000023748 #36	STRN4 (ENSUMAG00000023724)	PRKD2 (ENSUMAG00000023719)	GNG8 (ENSUMAG00000023717)	ENSUMAG00000023716	ENSUMAG00000023715	CCDC8 (ENSUMAG00000023713)	PNMA8C (ENSUMAG00000023712)
Giant Panda	MODERN SPECIES	3	CARD8 (ENSAMEG00000015082) #7	ZSWIM9 (ENSAMEG00000015090) #8	ENSAMEG00000015091	CABP5 (ENSAMEG00000015170) #10	ELSPBP1 (ENSAMEG00000015177) #11	BSPH1 (ENSAMEG00000024094) #12	CRX (ENSAMEG00000015191) #14	SELENOW (ENSAMEG00000028907) #15	NOP53 (ENSAMEG00000015214) #16	EHD2 (ENSAMEG00000015263) #17	BICRA (ENSAMEG00000008090)	ZNF541 (ENSAMEG00000029569) #18	NAPA (ENSAMEG00000008104) #19	KPTN (ENSAMEG00000008142) #20	SLC8A2 (ENSAMEG00000008172) #21	MEIS3 (ENSAMEG00000008199) #22	DHX34 (ENSAMEG00000008270) #23	C5AR2 (ENSAMEG00000019477) #24	CCDC9 (ENSAMEG00000008286) #27	BBC3 (ENSAMEG00000008310) #28	SAE1 (ENSAMEG00000008313) #29	ZC3H4 (ENSAMEG00000008349) #30	TMEM160 (ENSAMEG00000028478) #31	ARHGAP35 (ENSAMEG00000008374) #33	ENSAMEG00000008394 #35	SLC1A5 (ENSAMEG00000008407) #36	STRN4 (ENSAMEG00000008435)	PRKD2 (ENSAMEG00000008498)	ENSAMEG00000026303	GNG8 (ENSAMEG00000008557)	ENSAMEG00000008560
Mustelinae	ANCESTRAL SPECIES	7	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Ferret	DUPLICATION
Ferret	MODERN SPECIES	291	ENSMPUG00000004302 #7	ZSWIM9 (ENSMPUG00000004307) #8	LIG1 (ENSMPUG00000004309) #9	CABP5 (ENSMPUG00000004329) #10	ELSPBP1 (ENSMPUG00000004369) #11	ENSMPUG00000004404 #13	CRX (ENSMPUG00000004411) #14	SELENOW (ENSMPUG00000004433) #15	NOP53 (ENSMPUG00000004456) #16	EHD2 (ENSMPUG00000004466) #17	BICRA (ENSMPUG00000004473)	ZNF541 (ENSMPUG00000004486) #18	NAPA (ENSMPUG00000004511) #19	KPTN (ENSMPUG00000004660) #20	SLC8A2 (ENSMPUG00000004745) #21	ENSMPUG00000004760 #22	DHX34 (ENSMPUG00000004925) #23	C5AR2 (ENSMPUG00000019367) #24	C5AR1 (ENSMPUG00000019368) #25	CCDC9 (ENSMPUG00000004941) #27	BBC3 (ENSMPUG00000004953) #28	SAE1 (ENSMPUG00000004965) #29	ZC3H4 (ENSMPUG00000005065) #30	TMEM160 (ENSMPUG00000005131) #31	NPAS1 (ENSMPUG00000005118) #32	ARHGAP35 (ENSMPUG00000005138) #33	AP2S1 (ENSMPUG00000005143) #35	SLC1A5 (ENSMPUG00000005149) #36	FKRP (ENSMPUG00000019369) #37	STRN4 (ENSMPUG00000005157)	PRKD2 (ENSMPUG00000005234)
Ferret	MODERN SPECIES	276									PHYHIPL (ENSMPUG00000011002)	FAM13C (ENSMPUG00000011007)	SLC16A9 (ENSMPUG00000011013)	ENSMPUG00000011021	CCDC6 (ENSMPUG00000011027)	ANK3 (ENSMPUG00000011035)	ENSMPUG00000019949	ENSMPUG00000019950 #22	CDK1 (ENSMPUG00000011057)	RHOBTB1 (ENSMPUG00000011060)	ENSMPUG00000019951	TMEM26 (ENSMPUG00000011065)	CABCOCO1 (ENSMPUG00000011071)	ARID5B (ENSMPUG00000011076)	ENSMPUG00000011082	RTKN2 (ENSMPUG00000011086)	ZNF365 (ENSMPUG00000011094)	ENSMPUG00000011097	ADO (ENSMPUG00000019952)	EGR2 (ENSMPUG00000011103)	NRBF2 (ENSMPUG00000011106)	JMJD1C (ENSMPUG00000011122)	ENSMPUG00000019953
American mink	MODERN SPECIES	135	LIG1 (ENSNVIG00000011315) #9	CABP5 (ENSNVIG00000011286) #10	ELSPBP1 (ENSNVIG00000011256) #11	ENSNVIG00000011237 #12	ENSNVIG00000011212 #13	CRX (ENSNVIG00000011203) #14	ENSNVIG00000011194	SELENOW (ENSNVIG00000011156) #15	NOP53 (ENSNVIG00000011121) #16	EHD2 (ENSNVIG00000011110) #17	BICRA (ENSNVIG00000011095)	ZNF541 (ENSNVIG00000011069) #18	NAPA (ENSNVIG00000011031) #19	KPTN (ENSNVIG00000011012) #20	SLC8A2 (ENSNVIG00000011004) #21	MEIS3 (ENSNVIG00000010981) #22	DHX34 (ENSNVIG00000010958) #23	C5AR2 (ENSNVIG00000010949) #24	C5AR1 (ENSNVIG00000010940) #25	CCDC9 (ENSNVIG00000010901) #27	ENSNVIG00000010884 #28	SAE1 (ENSNVIG00000010826) #29	ZC3H4 (ENSNVIG00000010804) #30	TMEM160 (ENSNVIG00000010793) #31	NPAS1 (ENSNVIG00000010755) #32	ARHGAP35 (ENSNVIG00000010727) #33	AP2S1 (ENSNVIG00000010605) #35	SLC1A5 (ENSNVIG00000010588) #36	FKRP (ENSNVIG00000010581) #37	STRN4 (ENSNVIG00000010539)	PRKD2 (ENSNVIG00000009771)
Canidae	ANCESTRAL SPECIES	5	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000166546	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00390000018706.n	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Dingo	MODERN SPECIES	125	ZSWIM9 (ENSCAFG00020026450) #8	LIG1 (ENSCAFG00020026453) #9	CABP5 (ENSCAFG00020026519) #10	ENSCAFG00020026523 #11	ENSCAFG00020026524 #11	BSPH1 (ENSCAFG00020026526) #12	ENSCAFG00020026528 #13	ENSCAFG00020026529	CRX (ENSCAFG00020026531) #14	EHD2 (ENSCAFG00020000226) #17	BICRA (ENSCAFG00020000660)	ZNF541 (ENSCAFG00020000764) #18	NAPA (ENSCAFG00020000831) #19	KPTN (ENSCAFG00020000973) #20	SLC8A2 (ENSCAFG00020001118) #21	MEIS3 (ENSCAFG00020001147) #22	DHX34 (ENSCAFG00020001163) #23	C5AR2 (ENSCAFG00020001172) #24	C5AR1 (ENSCAFG00020001178) #25	INAFM1 (ENSCAFG00020001184) #26	CCDC9 (ENSCAFG00020001196) #27	ENSCAFG00020001204	SAE1 (ENSCAFG00020001254) #29	ZC3H4 (ENSCAFG00020001450) #30	ENSCAFG00020001527 #32	ENSCAFG00020001534 #32	ARHGAP35 (ENSCAFG00020001540) #33	ENSCAFG00020001550 #35	SLC1A5 (ENSCAFG00020001559) #36	FKRP (ENSCAFG00020001564) #37	STRN4 (ENSCAFG00020001572)
Dog	MODERN SPECIES		ZSWIM9 (ENSCAFG00845001889) #8	LIG1 (ENSCAFG00845002011) #9	CABP5 (ENSCAFG00845002104) #10	ELSPBP1 (ENSCAFG00845002136) #11	ENSCAFG00845002180 #13	ENSCAFG00845002194	CRX (ENSCAFG00845002208) #14	ENSCAFG00845002224 #15	NOP53 (ENSCAFG00845002253) #16	EHD2 (ENSCAFG00845002294) #17	BICRA (ENSCAFG00845002344)	ZNF541 (ENSCAFG00845002412) #18	NAPA (ENSCAFG00845002467) #19	KPTN (ENSCAFG00845002500) #20	SLC8A2 (ENSCAFG00845002555) #21	MEIS3 (ENSCAFG00845002685) #22	DHX34 (ENSCAFG00845002720) #23	C5AR2 (ENSCAFG00845002732) #24	C5AR1 (ENSCAFG00845002761) #25	INAFM1 (ENSCAFG00845002784) #26	CCDC9 (ENSCAFG00845002800) #27	BBC3 (ENSCAFG00845002815) #28	SAE1 (ENSCAFG00845002951) #29	ZC3H4 (ENSCAFG00845002992) #30	TMEM160 (ENSCAFG00845003007) #31	ARHGAP35 (ENSCAFG00845003034) #32	ARHGAP35 (ENSCAFG00845003086) #33	AP2S1 (ENSCAFG00845003157) #35	SLC1A5 (ENSCAFG00845003284) #36	FKRP (ENSCAFG00845003332) #37	STRN4 (ENSCAFG00845003353)
Red fox	MODERN SPECIES	101	CARD8 (ENSVVUG00000023304) #7	ENSVVUG00000023311 #8	LIG1 (ENSVVUG00000023318) #9	CABP5 (ENSVVUG00000023332) #10	ELSPBP1 (ENSVVUG00000023338) #11	BSPH1 (ENSVVUG00000023344) #12	ENSVVUG00000023349 #13	CRX (ENSVVUG00000023352) #14	ENSVVUG00000023357	NOP53 (ENSVVUG00000023365) #16	EHD2 (ENSVVUG00000023369) #17	ZNF541 (ENSVVUG00000023392) #18	NAPA (ENSVVUG00000023413) #19	KPTN (ENSVVUG00000023485) #20	SLC8A2 (ENSVVUG00000023490) #21	MEIS3 (ENSVVUG00000023497) #22	DHX34 (ENSVVUG00000023515) #23	C5AR2 (ENSVVUG00000023517) #24	C5AR1 (ENSVVUG00000023518) #25	CCDC9 (ENSVVUG00000023520) #27	ENSVVUG00000023521	ENSVVUG00000000139	SAE1 (ENSVVUG00000000163) #29	ZC3H4 (ENSVVUG00000000208) #30	TMEM160 (ENSVVUG00000000280) #31	NPAS1 (ENSVVUG00000000317) #32	ARHGAP35 (ENSVVUG00000000350) #33	AP2S1 (ENSVVUG00000000416) #35	FKRP (ENSVVUG00000000452) #37	SLC1A5 (ENSVVUG00000000475) #36	STRN4 (ENSVVUG00000000583)
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Equus	ANCESTRAL SPECIES	1	ENSGT00940000154432.r	ENSGT00940000154432.q.a.b.a	ENSGT00940000154432.q.a.a.a.b	ENSGT00940000154432.q.a.b.b	ENSGT00940000154432.q.a.a.a.a	ENSGT00940000161634 #14	ENSGT00940000154432.q.a.a.b	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Donkey	MODERN SPECIES	18	ENSEASG00005004396	ENSEASG00005004386	ENSEASG00005004378	ENSEASG00005031534	CRX (ENSEASG00005004365) #14	ENSEASG00005036968	ENSEASG00005004352 #15	NOP53 (ENSEASG00005004345) #16	EHD2 (ENSEASG00005004339) #17	ZNF541 (ENSEASG00005004241) #18	NAPA (ENSEASG00005004201) #19	KPTN (ENSEASG00005004183) #20	ENSEASG00005004180 #21	ENSEASG00005004177 #21	ENSEASG00005028907	MEIS3 (ENSEASG00005004166) #22	DHX34 (ENSEASG00005004155) #23	C5AR2 (ENSEASG00005025956) #24	C5AR1 (ENSEASG00005026249) #25	INAFM1 (ENSEASG00005030427) #26	CCDC9 (ENSEASG00005004139) #27	ENSEASG00005035087	SAE1 (ENSEASG00005004124) #29	ZC3H4 (ENSEASG00005004107) #30	TMEM160 (ENSEASG00005023909) #31	ENSEASG00005038114 #32	ENSEASG00005004094 #32	ENSEASG00005032745 #32	ARHGAP35 (ENSEASG00005004087) #33	ENSEASG00005032304 #35	SLC1A5 (ENSEASG00005004062) #36
Horse	MODERN SPECIES	1	ENSECAG00000049982	ENSECAG00000007898	ENSECAG00000020744	ENSECAG00000057574	ENSECAG00000010649	CRX (ENSECAG00000010376) #14	ENSECAG00000029321	SELENOW (ENSECAG00000006989) #15	NOP53 (ENSECAG00000026850) #16	EHD2 (ENSECAG00000028265) #17	BICRA (ENSECAG00000030809)	ZNF541 (ENSECAG00000019417) #18	NAPA (ENSECAG00000006959) #19	KPTN (ENSECAG00000018392) #20	SLC8A2 (ENSECAG00000008392) #21	MEIS3 (ENSECAG00000016791) #22	DHX34 (ENSECAG00000011354) #23	C5AR2 (ENSECAG00000006218) #24	C5AR1 (ENSECAG00000006153) #25	CCDC9 (ENSECAG00000008559) #27	ENSECAG00000031168	SAE1 (ENSECAG00000002087) #29	ZC3H4 (ENSECAG00000024342) #30	NPAS1 (ENSECAG00000022513) #32	ARHGAP35 (ENSECAG00000017712) #33	AP2S1 (ENSECAG00000016403) #35	SLC1A5 (ENSECAG00000011637) #36	FKRP (ENSECAG00000010652) #37	STRN4 (ENSECAG00000002830)	PRKD2 (ENSECAG00000024775)	DACT3 (ENSECAG00000026972)
Chiroptera	ANCESTRAL SPECIES	16	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011.c #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Megabat	MODERN SPECIES	654												ZNF541 (ENSPVAG00000004031) #18	NAPA (ENSPVAG00000004030) #19	KPTN (ENSPVAG00000004028) #20	SLC8A2 (ENSPVAG00000004025) #21	MEIS3 (ENSPVAG00000004023) #22	DHX34 (ENSPVAG00000004017) #23
Microchiroptera	ANCESTRAL SPECIES	18	ENSGT00390000011694 #8	ENSGT00940000167541	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007 #29	ENSGT00940000160011.c #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010005515	ZSWIM9 (ENSRFEG00010005491) #8	ENSRFEG00010005427	CABP5 (ENSRFEG00010005387) #10	ENSRFEG00010005368 #12	SULT2A1 (ENSRFEG00010005353)	CRX (ENSRFEG00010005332) #14	SELENOW (ENSRFEG00010005319) #15	NOP53 (ENSRFEG00010015079) #16	EHD2 (ENSRFEG00010015006) #17	BICRA (ENSRFEG00010014745)	ZNF541 (ENSRFEG00010014459) #18	NAPA (ENSRFEG00010014363) #19	KPTN (ENSRFEG00010014307) #20	SLC8A2 (ENSRFEG00010014268) #21	MEIS3 (ENSRFEG00010014079) #22	DHX34 (ENSRFEG00010014000) #23	C5AR2 (ENSRFEG00010013977) #24	ENSRFEG00010013958	C5AR1 (ENSRFEG00010013939) #25	ENSRFEG00010013918	CCDC9 (ENSRFEG00010013812) #27	ENSRFEG00010013509	SAE1 (ENSRFEG00010013378) #29	ZC3H4 (ENSRFEG00010013266) #30	TMEM160 (ENSRFEG00010013212) #31	NPAS1 (ENSRFEG00010013143) #32	ARHGAP35 (ENSRFEG00010013104) #33	AP2S1 (ENSRFEG00010012755) #35	SLC1A5 (ENSRFEG00010012525) #36	FKRP (ENSRFEG00010012506) #37
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Suina	ANCESTRAL SPECIES	2	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003.b #12	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Pig	MODERN SPECIES	14	LIG1 (ENSSSCG00000003128) #9	CABP5 (ENSSSCG00000003126) #10	ELSPBP1 (ENSSSCG00000003125) #11	BSPH1 (ENSSSCG00000003123) #12	ENSSSCG00000058863 #12	SULT2A1 (ENSSSCG00000033207)	CRX (ENSSSCG00000003124) #14	SELENOW (ENSSSCG00000034313) #15	NOP53 (ENSSSCG00000022774) #16	EHD2 (ENSSSCG00000023371) #17	BICRA (ENSSSCG00000022302)	ZNF541 (ENSSSCG00000003119) #18	NAPA (ENSSSCG00000003120) #19	KPTN (ENSSSCG00000003121) #20	SLC8A2 (ENSSSCG00000029567) #21	MEIS3 (ENSSSCG00000003115) #22	DHX34 (ENSSSCG00000003114) #23	C5AR2 (ENSSSCG00000003113) #24	C5AR1 (ENSSSCG00000056729) #25	CCDC9 (ENSSSCG00000024240) #27	BBC3 (ENSSSCG00000003112) #28	SAE1 (ENSSSCG00000003111) #29	ZC3H4 (ENSSSCG00000003110) #30	TMEM160 (ENSSSCG00000003109) #31	NPAS1 (ENSSSCG00000003108) #32	ARHGAP35 (ENSSSCG00000003107) #33	AP2S1 (ENSSSCG00000003106) #35	SLC1A5 (ENSSSCG00000003105) #36	FKRP (ENSSSCG00000003103) #37	STRN4 (ENSSSCG00000003104)	PRKD2 (ENSSSCG00000026152)
Chacoan peccary	MODERN SPECIES	799	LIG1 (ENSCWAG00000013278) #9	CABP5 (ENSCWAG00000013178) #10	ELSPBP1 (ENSCWAG00000013009) #11	BSPH1 (ENSCWAG00000012970) #12	SULT2A1 (ENSCWAG00000012896)	CRX (ENSCWAG00000012855) #14	SELENOW (ENSCWAG00000012829) #15	NOP53 (ENSCWAG00000012770) #16	EHD2 (ENSCWAG00000012728) #17	BICRA (ENSCWAG00000012587)	ZNF541 (ENSCWAG00000012278) #18	NAPA (ENSCWAG00000012199) #19	KPTN (ENSCWAG00000012157) #20	SLC8A2 (ENSCWAG00000011951) #21	ENSCWAG00000011922	MEIS3 (ENSCWAG00000011591) #22	DHX34 (ENSCWAG00000011536) #23	C5AR2 (ENSCWAG00000011520) #24	C5AR1 (ENSCWAG00000011461) #25	INAFM1 (ENSCWAG00000011443) #26	CCDC9 (ENSCWAG00000011355) #27	BBC3 (ENSCWAG00000011285) #28	SAE1 (ENSCWAG00000011191) #29	ZC3H4 (ENSCWAG00000011062) #30	TMEM160 (ENSCWAG00000011029) #31	NPAS1 (ENSCWAG00000010905) #32	ARHGAP35 (ENSCWAG00000010834) #33	AP2S1 (ENSCWAG00000010683) #35	SLC1A5 (ENSCWAG00000010631) #36	FKRP (ENSCWAG00000010618) #37	STRN4 (ENSCWAG00000010545)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Camelidae	ANCESTRAL SPECIES	15	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b
Arabian camel	MODERN SPECIES	35	LIG1 (ENSCDRG00005001482) #9	CABP5 (ENSCDRG00005001418) #10	ELSPBP1 (ENSCDRG00005001383) #11	BSPH1 (ENSCDRG00005001366) #12	ENSCDRG00005001351 #13	SULT2A1 (ENSCDRG00005001335)	CRX (ENSCDRG00005001324) #14	SELENOW (ENSCDRG00005001304) #15	NOP53 (ENSCDRG00005001286) #16	EHD2 (ENSCDRG00005001269) #17	BICRA (ENSCDRG00005001209)	ZNF541 (ENSCDRG00005001169) #18	NAPA (ENSCDRG00005001100) #19	KPTN (ENSCDRG00005001072) #20	SLC8A2 (ENSCDRG00005001049) #21	MEIS3 (ENSCDRG00005001000) #22	DHX34 (ENSCDRG00005000955) #23	C5AR2 (ENSCDRG00005000932) #24	C5AR1 (ENSCDRG00005000922) #25	CCDC9 (ENSCDRG00005000886) #27	ENSCDRG00005000861	SAE1 (ENSCDRG00005000803) #29	ZC3H4 (ENSCDRG00005000747) #30	TMEM160 (ENSCDRG00005000726) #31	NPAS1 (ENSCDRG00005000700) #32	ENSCDRG00005000682	ARHGAP35 (ENSCDRG00005000613) #33	AP2S1 (ENSCDRG00005000547) #35	SLC1A5 (ENSCDRG00005000433) #36	STRN4 (ENSCDRG00005000314)	PRKD2 (ENSCDRG00005000229)
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Cetacea	ANCESTRAL SPECIES	6	ENSGT00950000183364	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Blue whale	MODERN SPECIES	10	EMP3 (ENSBMSG00010018476)	ENSBMSG00010018517	ZSWIM9 (ENSBMSG00010018625) #8	LIG1 (ENSBMSG00010018736) #9	CABP5 (ENSBMSG00010019330) #10	BSPH1 (ENSBMSG00010019372) #12	ENSBMSG00010019459 #13	CRX (ENSBMSG00010019483) #14	SELENOW (ENSBMSG00010019516) #15	NOP53 (ENSBMSG00010019557) #16	EHD2 (ENSBMSG00010019668) #17	BICRA (ENSBMSG00010019701)	ZNF541 (ENSBMSG00010019774) #18	NAPA (ENSBMSG00010019832) #19	SLC8A2 (ENSBMSG00010019907) #21	MEIS3 (ENSBMSG00010019996) #22	DHX34 (ENSBMSG00010020024) #23	C5AR2 (ENSBMSG00010020050) #24	C5AR1 (ENSBMSG00010020065) #25	CCDC9 (ENSBMSG00010020094) #27	BBC3 (ENSBMSG00010020342) #28	SAE1 (ENSBMSG00010020376) #29	ZC3H4 (ENSBMSG00010020432) #30	TMEM160 (ENSBMSG00010020478) #31	NPAS1 (ENSBMSG00010020493) #32	ARHGAP35 (ENSBMSG00010020533) #33	AP2S1 (ENSBMSG00010020580) #35	SLC1A5 (ENSBMSG00010020761) #36	FKRP (ENSBMSG00010020816) #37	STRN4 (ENSBMSG00010020831)	PRKD2 (ENSBMSG00010020856)
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00950000182696.B.b	ENSGT00950000183364	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Sperm whale	MODERN SPECIES	8	NOVA2 (ENSPCTG00005012295)	HIF3A (ENSPCTG00005011738)	CCDC8 (ENSPCTG00005011665)	ENSPCTG00005011609	STRN4 (ENSPCTG00005011583)	ARHGAP35 (ENSPCTG00005011530) #33	ENSPCTG00005011494 #30	ENSPCTG00005011470 #29	ENSPCTG00005011422 #29	ENSPCTG00005011401	ENSPCTG00005011381	ZNF541 (ENSPCTG00005010975) #18	NOP53 (ENSPCTG00005010906) #16	EHD2 (ENSPCTG00005010881) #17	SLC8A2 (ENSPCTG00005010761) #21	MEIS3 (ENSPCTG00005010662) #22	DHX34 (ENSPCTG00005010600)	C5AR1 (ENSPCTG00005010550) #25	C5AR2 (ENSPCTG00005010531) #24	CRX (ENSPCTG00005010490) #14	BSPH1 (ENSPCTG00005010425) #12	CABP5 (ENSPCTG00005010338) #10	LIG1 (ENSPCTG00005010166) #9	ZSWIM9 (ENSPCTG00005010099) #8	ENSPCTG00005009812	EMP3 (ENSPCTG00005009729)	TMEM143 (ENSPCTG00005009645)	FUT2 (ENSPCTG00005009628)	ENSPCTG00005009590	BAX (ENSPCTG00005009439)	GYS1 (ENSPCTG00005009316)
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000154315.a	ENSGT00950000182696.B.b	ENSGT00950000183364	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Dolphin	MODERN SPECIES	267												ZNF541 (ENSTTRG00000002308) #18	NAPA (ENSTTRG00000002302) #19	KPTN (ENSTTRG00000002295) #20	SLC8A2 (ENSTTRG00000002288) #21	MEIS3 (ENSTTRG00000002278) #22	DHX34 (ENSTTRG00000002257) #23	C5AR2 (ENSTTRG00000002254) #24	CCDC9 (ENSTTRG00000002244) #27	BBC3 (ENSTTRG00000002238) #28	SAE1 (ENSTTRG00000002224) #29	ZC3H4 (ENSTTRG00000002197) #30
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000154315.a	ENSGT00950000182696.B.b	ENSGT00950000183364	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000154315.a	ENSGT00950000182696.B.b	ENSGT00950000183364	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Beluga whale	MODERN SPECIES	14	TMEM143 (ENSDLEG00000001353)	EMP3 (ENSDLEG00000001369)	ENSDLEG00000001424	ZSWIM9 (ENSDLEG00000001465) #8	LIG1 (ENSDLEG00000001815) #9	CABP5 (ENSDLEG00000003694) #10	CRX (ENSDLEG00000003702) #14	SELENOW (ENSDLEG00000003712) #15	NOP53 (ENSDLEG00000003719) #16	EHD2 (ENSDLEG00000003725) #17	BICRA (ENSDLEG00000003735)	ZNF541 (ENSDLEG00000003750) #18	NAPA (ENSDLEG00000003763) #19	KPTN (ENSDLEG00000003782) #20	SLC8A2 (ENSDLEG00000003792) #21	MEIS3 (ENSDLEG00000003805) #22	DHX34 (ENSDLEG00000003821) #23	C5AR2 (ENSDLEG00000003852) #24	C5AR1 (ENSDLEG00000003857) #25	CCDC9 (ENSDLEG00000003861) #27	BBC3 (ENSDLEG00000003877) #28	SAE1 (ENSDLEG00000003883) #29	ZC3H4 (ENSDLEG00000003907) #30	TMEM160 (ENSDLEG00000003972) #31	ENSDLEG00000003975 #32	ENSDLEG00000003982 #32	ARHGAP35 (ENSDLEG00000003986) #33	AP2S1 (ENSDLEG00000003991) #35	SLC1A5 (ENSDLEG00000003998) #36	FKRP (ENSDLEG00000004003) #37	STRN4 (ENSDLEG00000004005)
Narwhal	MODERN SPECIES	296	TMEM143 (ENSMMNG00015001449)	EMP3 (ENSMMNG00015001411)	ENSMMNG00015001392	ZSWIM9 (ENSMMNG00015001378) #8	LIG1 (ENSMMNG00015001221) #9	CABP5 (ENSMMNG00015001124) #10	CRX (ENSMMNG00015001105) #14	SELENOW (ENSMMNG00015001091) #15	NOP53 (ENSMMNG00015001038) #16	EHD2 (ENSMMNG00015000998) #17	BICRA (ENSMMNG00015000944)	ZNF541 (ENSMMNG00015000861) #18	NAPA (ENSMMNG00015000780) #19	KPTN (ENSMMNG00015000731) #20	SLC8A2 (ENSMMNG00015000698) #21	MEIS3 (ENSMMNG00015000637) #22	DHX34 (ENSMMNG00015000592) #23	C5AR2 (ENSMMNG00015000578) #24	C5AR1 (ENSMMNG00015000571) #25	CCDC9 (ENSMMNG00015000542) #27	BBC3 (ENSMMNG00015000522) #28	SAE1 (ENSMMNG00015000464) #29	ZC3H4 (ENSMMNG00015000348) #30	TMEM160 (ENSMMNG00015000299) #31	NPAS1 (ENSMMNG00015000269) #32	ARHGAP35 (ENSMMNG00015000238) #33	AP2S1 (ENSMMNG00015000164) #35	SLC1A5 (ENSMMNG00015000079) #36	FKRP (ENSMMNG00015000038) #37	STRN4 (ENSMMNG00015008395)	PRKD2 (ENSMMNG00015008344)
Vaquita	MODERN SPECIES	10	TMEM143 (ENSPSNG00000019184)	EMP3 (ENSPSNG00000019298)	ENSPSNG00000019349	ZSWIM9 (ENSPSNG00000019394) #8	ENSPSNG00000019473	CABP5 (ENSPSNG00000019673) #10	CRX (ENSPSNG00000019726) #14	SELENOW (ENSPSNG00000019760) #15	NOP53 (ENSPSNG00000019800) #16	EHD2 (ENSPSNG00000019860) #17	BICRA (ENSPSNG00000019926)	ZNF541 (ENSPSNG00000020105) #18	NAPA (ENSPSNG00000020206) #19	KPTN (ENSPSNG00000020252) #20	SLC8A2 (ENSPSNG00000020290) #21	MEIS3 (ENSPSNG00000020466) #22	DHX34 (ENSPSNG00000020581) #23	C5AR2 (ENSPSNG00000020611) #24	C5AR1 (ENSPSNG00000020623) #25	CCDC9 (ENSPSNG00000020676) #27	BBC3 (ENSPSNG00000020767) #28	SAE1 (ENSPSNG00000020821) #29	ZC3H4 (ENSPSNG00000020937) #30	TMEM160 (ENSPSNG00000021070) #31	NPAS1 (ENSPSNG00000021101) #32	ARHGAP35 (ENSPSNG00000021142) #33	AP2S1 (ENSPSNG00000021195) #35	SLC1A5 (ENSPSNG00000021297) #36	FKRP (ENSPSNG00000021515) #37	STRN4 (ENSPSNG00000021546)	PRKD2 (ENSPSNG00000021606)
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.w	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.x	ENSGT00940000154432.w	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.x	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.x.a	ENSGT00940000154432.x.b	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Bos	ANCESTRAL SPECIES	4	ENSGT00940000163003 #12	ENSGT00940000163805.a #13	ENSGT00940000154432.x.a	ENSGT00940000154432.x.b	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Bos_a	ANCESTRAL SPECIES	16	ENSGT00940000163003 #12	ENSGT00940000163805.a #13	ENSGT00940000154432.x.b	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000166546	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Domestic yak	MODERN SPECIES	12	ENSBGRG00000024976 #11	BSPH1 (ENSBGRG00000024987) #12	ENSBGRG00000025019 #13	ENSBGRG00000025027 #13	SULT2A1 (ENSBGRG00000025053)	ENSBGRG00000025166	CRX (ENSBGRG00000025177) #14	ENSBGRG00000025192 #15	NOP53 (ENSBGRG00000025223) #16	EHD2 (ENSBGRG00000025286) #17	BICRA (ENSBGRG00000025303)	ZNF541 (ENSBGRG00000025322) #18	NAPA (ENSBGRG00000025359) #19	KPTN (ENSBGRG00000025467) #20	SLC8A2 (ENSBGRG00000025527) #21	MEIS3 (ENSBGRG00000025550) #22	ENSBGRG00000014586	C5AR2 (ENSBGRG00000014720) #24	C5AR1 (ENSBGRG00000014737) #25	INAFM1 (ENSBGRG00000014787) #26	CCDC9 (ENSBGRG00000014812) #27	BBC3 (ENSBGRG00000015056) #28	SAE1 (ENSBGRG00000015234) #29	ZC3H4 (ENSBGRG00000015678) #30	TMEM160 (ENSBGRG00000015984) #31	NPAS1 (ENSBGRG00000016050) #32	ARHGAP35 (ENSBGRG00000016330) #33	ENSBGRG00000016517 #35	SLC1A5 (ENSBGRG00000016867) #36	FKRP (ENSBGRG00000017133) #37	STRN4 (ENSBGRG00000017163)
Wild yak	MODERN SPECIES	1227									ENSBMUG00000003852 #15	NOP53 (ENSBMUG00000003894) #16	EHD2 (ENSBMUG00000003920) #17	ZNF541 (ENSBMUG00000004011) #18	NAPA (ENSBMUG00000004066) #19	KPTN (ENSBMUG00000004112) #20	SLC8A2 (ENSBMUG00000004136) #21	MEIS3 (ENSBMUG00000004394) #22	DHX34 (ENSBMUG00000004684) #23	C5AR2 (ENSBMUG00000004695) #24	C5AR1 (ENSBMUG00000004853) #25	INAFM1 (ENSBMUG00000004859) #26	CCDC9 (ENSBMUG00000004872) #27	BBC3 (ENSBMUG00000004887) #28	SAE1 (ENSBMUG00000004945) #29	ZC3H4 (ENSBMUG00000005069) #30	TMEM160 (ENSBMUG00000005100) #31	ENSBMUG00000005105 #32	ARHGAP35 (ENSBMUG00000005114) #33	AP2S1 (ENSBMUG00000005174) #35	SLC1A5 (ENSBMUG00000005207) #36	STRN4 (ENSBMUG00000005225)	PRKD2 (ENSBMUG00000005252)
Bos_b	ANCESTRAL SPECIES		ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805.a #13	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Hybrid Bos Indicus	MODERN SPECIES	9	LIG1 (ENSBIXG00005025690) #9	CABP5 (ENSBIXG00005025628) #10	ELSPBP1 (ENSBIXG00005025587) #11	BSPH1 (ENSBIXG00005025552) #12	ENSBIXG00005025524 #13	SULT2A1 (ENSBIXG00005025492)	CRX (ENSBIXG00005025456) #14	ENSBIXG00005004327 #15	NOP53 (ENSBIXG00005025408) #16	EHD2 (ENSBIXG00005025382) #17	BICRA (ENSBIXG00005025350)	ZNF541 (ENSBIXG00005025312) #18	NAPA (ENSBIXG00005025291) #19	KPTN (ENSBIXG00005006855) #20	SLC8A2 (ENSBIXG00005025226) #21	MEIS3 (ENSBIXG00005025204) #22	DHX34 (ENSBIXG00005004281) #23	C5AR2 (ENSBIXG00005025135) #24	C5AR1 (ENSBIXG00005025115) #25	CCDC9 (ENSBIXG00005025090) #27	BBC3 (ENSBIXG00005024989) #28	SAE1 (ENSBIXG00005024933) #29	ZC3H4 (ENSBIXG00005024863) #30	ENSBIXG00005024833 #31	NPAS1 (ENSBIXG00005024813) #32	ARHGAP35 (ENSBIXG00005004231) #33	AP2S1 (ENSBIXG00005024725) #35	SLC1A5 (ENSBIXG00005024582) #36	FKRP (ENSBIXG00005024505) #37	STRN4 (ENSBIXG00005024484)	PRKD2 (ENSBIXG00005024335)
Cow	MODERN SPECIES	9	ZSWIM9 (ENSBTAG00000014597) #8	LIG1 (ENSBTAG00000014595) #9	CABP5 (ENSBTAG00000016114) #10	ELSPBP1 (ENSBTAG00000016113) #11	ENSBTAG00000040054 #13	ENSBTAG00000039971	SULT2A1 (ENSBTAG00000023419)	CRX (ENSBTAG00000021185) #14	NOP53 (ENSBTAG00000021192) #16	EHD2 (ENSBTAG00000021191) #17	BICRA (ENSBTAG00000004138)	ZNF541 (ENSBTAG00000012606) #18	NAPA (ENSBTAG00000013084) #19	KPTN (ENSBTAG00000030769) #20	SLC8A2 (ENSBTAG00000010856) #21	MEIS3 (ENSBTAG00000006862) #22	DHX34 (ENSBTAG00000006848) #23	C5AR2 (ENSBTAG00000037735) #24	C5AR1 (ENSBTAG00000020872) #25	INAFM1 (ENSBTAG00000053132) #26	CCDC9 (ENSBTAG00000014117) #27	BBC3 (ENSBTAG00000050313) #28	SAE1 (ENSBTAG00000002676) #29	ZC3H4 (ENSBTAG00000009286) #30	TMEM160 (ENSBTAG00000015579) #31	NPAS1 (ENSBTAG00000015576) #32	ARHGAP35 (ENSBTAG00000015543) #33	AP2S1 (ENSBTAG00000010584) #35	SLC1A5 (ENSBTAG00000013577) #36	FKRP (ENSBTAG00000050243) #37	STRN4 (ENSBTAG00000005830)
American bison	MODERN SPECIES	3227							CRX (ENSBBBG00000003180) #14	SELENOW (ENSBBBG00000014141) #15	NOP53 (ENSBBBG00000014154) #16	EHD2 (ENSBBBG00000006945) #17	BICRA (ENSBBBG00000003213)	ZNF541 (ENSBBBG00000014201) #18	NAPA (ENSBBBG00000014223) #19	KPTN (ENSBBBG00000014243) #20	SLC8A2 (ENSBBBG00000014252) #21	MEIS3 (ENSBBBG00000009054) #22	DHX34 (ENSBBBG00000014324) #23	C5AR1 (ENSBBBG00000003265) #25	CCDC9 (ENSBBBG00000014362) #27	BBC3 (ENSBBBG00000014369) #28	SAE1 (ENSBBBG00000014398) #29	ENSBBBG00000003321 #31	ENSBBBG00000014422 #32	ARHGAP35 (ENSBBBG00000014432) #33	AP2S1 (ENSBBBG00000002880) #35	SLC1A5 (ENSBBBG00000003362) #36	STRN4 (ENSBBBG00000007553)	PRKD2 (ENSBBBG00000007407)	ENSBBBG00000014572	GNG8 (ENSBBBG00000007169)	PTGIR (ENSBBBG00000014585)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Rambouillet Sheep	MODERN SPECIES	5	LIG1 (ENSOARG00020014185) #9	CABP5 (ENSOARG00020014100) #10	ELSPBP1 (ENSOARG00020013971) #11	BSPH1 (ENSOARG00020013879) #12	ENSOARG00020013825	SULT2A1 (ENSOARG00020013754)	CRX (ENSOARG00020013684) #14	SELENOW (ENSOARG00020013536) #15	NOP53 (ENSOARG00020013455) #16	EHD2 (ENSOARG00020013411) #17	BICRA (ENSOARG00020013244)	ZNF541 (ENSOARG00020012969) #18	NAPA (ENSOARG00020012824) #19	KPTN (ENSOARG00020012769) #20	SLC8A2 (ENSOARG00020012581) #21	MEIS3 (ENSOARG00020012359) #22	DHX34 (ENSOARG00020012207) #23	C5AR2 (ENSOARG00020012174) #24	C5AR1 (ENSOARG00020012129) #25	INAFM1 (ENSOARG00020012115) #26	CCDC9 (ENSOARG00020012051) #27	BBC3 (ENSOARG00020011954) #28	SAE1 (ENSOARG00020011750) #29	ZC3H4 (ENSOARG00020011583) #30	TMEM160 (ENSOARG00020011550) #31	NPAS1 (ENSOARG00020011377) #32	ARHGAP35 (ENSOARG00020011291) #33	AP2S1 (ENSOARG00020010737) #35	SLC1A5 (ENSOARG00020010548) #36	FKRP (ENSOARG00020010516) #37	STRN4 (ENSOARG00020009995)
Goat	MODERN SPECIES	9	ZSWIM9 (ENSCHIG00000017474) #8	LIG1 (ENSCHIG00000025924) #9	ELSPBP1 (ENSCHIG00000008826) #11	BSPH1 (ENSCHIG00000022423) #12	ENSCHIG00000020372	ENSCHIG00000013073	CRX (ENSCHIG00000023022) #14	ENSCHIG00000022860 #15	NOP53 (ENSCHIG00000009393) #16	EHD2 (ENSCHIG00000011896) #17	BICRA (ENSCHIG00000012752)	ZNF541 (ENSCHIG00000013773) #18	NAPA (ENSCHIG00000023468) #19	KPTN (ENSCHIG00000019625) #20	SLC8A2 (ENSCHIG00000005606) #21	MEIS3 (ENSCHIG00000013472) #22	DHX34 (ENSCHIG00000024526) #23	C5AR2 (ENSCHIG00000003475) #24	C5AR1 (ENSCHIG00000016291) #25	INAFM1 (ENSCHIG00000003153) #26	CCDC9 (ENSCHIG00000008730) #27	ENSCHIG00000023357	BBC3 (ENSCHIG00000010347) #28	SAE1 (ENSCHIG00000026570) #29	ZC3H4 (ENSCHIG00000013956) #30	TMEM160 (ENSCHIG00000020208) #31	NPAS1 (ENSCHIG00000006784) #32	ARHGAP35 (ENSCHIG00000024478) #33	AP2S1 (ENSCHIG00000022984) #35	SLC1A5 (ENSCHIG00000020955) #36	FKRP (ENSCHIG00000005654) #37
Siberian musk deer	MODERN SPECIES	124	LIG1 (ENSMMSG00000000695) #9	CABP5 (ENSMMSG00000000844) #10	ELSPBP1 (ENSMMSG00000000869) #11	ENSMMSG00000000893 #12	ENSMMSG00000000912	ENSMMSG00000000929	CRX (ENSMMSG00000000942) #14	ENSMMSG00000000961 #15	NOP53 (ENSMMSG00000000991) #16	EHD2 (ENSMMSG00000001026) #17	BICRA (ENSMMSG00000001054)	ZNF541 (ENSMMSG00000001131) #18	NAPA (ENSMMSG00000001259) #19	KPTN (ENSMMSG00000001314) #20	SLC8A2 (ENSMMSG00000001344) #21	MEIS3 (ENSMMSG00000001373) #22	DHX34 (ENSMMSG00000001413) #23	C5AR2 (ENSMMSG00000001489) #24	C5AR1 (ENSMMSG00000001497) #25	CCDC9 (ENSMMSG00000001515) #27	BBC3 (ENSMMSG00000001565) #28	ENSMMSG00000001602 #29	ZC3H4 (ENSMMSG00000001677) #30	TMEM160 (ENSMMSG00000001690) #31	NPAS1 (ENSMMSG00000001706) #32	ARHGAP35 (ENSMMSG00000001730) #33	AP2S1 (ENSMMSG00000001766) #35	SLC1A5 (ENSMMSG00000001866) #36	FKRP (ENSMMSG00000001899) #37	STRN4 (ENSMMSG00000001918)	PRKD2 (ENSMMSG00000002012)
Yarkand deer	MODERN SPECIES	27	LIG1 (ENSCHYG00000020178) #9	CABP5 (ENSCHYG00000020089) #10	ELSPBP1 (ENSCHYG00000019986) #11	ENSCHYG00000019831 #12	ENSCHYG00000019726 #13	SULT2A1 (ENSCHYG00000019298)	CRX (ENSCHYG00000019234) #14	ENSCHYG00000019212 #15	NOP53 (ENSCHYG00000018854) #16	EHD2 (ENSCHYG00000018732) #17	BICRA (ENSCHYG00000018651)	ZNF541 (ENSCHYG00000018471) #18	NAPA (ENSCHYG00000018302) #19	KPTN (ENSCHYG00000018196) #20	SLC8A2 (ENSCHYG00000018134) #21	MEIS3 (ENSCHYG00000017783) #22	DHX34 (ENSCHYG00000017576) #23	C5AR2 (ENSCHYG00000017549) #24	ENSCHYG00000017494	C5AR1 (ENSCHYG00000017464) #25	INAFM1 (ENSCHYG00000017434) #26	ENSCHYG00000017388	CCDC9 (ENSCHYG00000017076) #27	ENSCHYG00000017008	SAE1 (ENSCHYG00000016642) #29	ZC3H4 (ENSCHYG00000016192) #30	TMEM160 (ENSCHYG00000016093) #31	NPAS1 (ENSCHYG00000015977) #32	ARHGAP35 (ENSCHYG00000015852) #33	AP2S1 (ENSCHYG00000015644) #35	SLC1A5 (ENSCHYG00000015481) #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161057 #22
Hedgehog	MODERN SPECIES	893																ENSEEUG00000006123 #22
Common shrew	MODERN SPECIES	496																ENSSARG00000004351 #22
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Glires	ANCESTRAL SPECIES	6	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Lagomorpha	ANCESTRAL SPECIES	135												ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b
Rabbit	MODERN SPECIES	568												ZNF541 (ENSOCUG00000000969) #18	NAPA (ENSOCUG00000000967) #19	KPTN (ENSOCUG00000024733) #20	ENSOCUG00000031820 #21	MEIS3 (ENSOCUG00000025760) #22	DHX34 (ENSOCUG00000014005) #23	C5AR2 (ENSOCUG00000025530) #24	C5AR1 (ENSOCUG00000022167) #25	CCDC9 (ENSOCUG00000013560) #27	BBC3 (ENSOCUG00000037839) #28	SAE1 (ENSOCUG00000024320) #29	ZC3H4 (ENSOCUG00000026069) #30	TMEM160 (ENSOCUG00000023097) #31	NPAS1 (ENSOCUG00000016061) #32	ARHGAP35 (ENSOCUG00000017126) #33	ENSOCUG00000039332	SLC1A5 (ENSOCUG00000009144) #36	FKRP (ENSOCUG00000000122) #37	STRN4 (ENSOCUG00000021418)	PRKD2 (ENSOCUG00000026784)
Pika	MODERN SPECIES	1283																MEIS3 (ENSOPRG00000011915) #22	ENSOPRG00000011872 #23	ENSOPRG00000011863 #24
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432.n	ENSGT00940000163805 #13	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00940000157783 #9	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00940000167173	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37
Myomorpha	ANCESTRAL SPECIES	20	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.m.b	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Muroidea	ANCESTRAL SPECIES	18	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.m.b	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000157783 #9	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.m.a.c	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #35
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000157783 #9	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.m.a.c	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #35
Mus	ANCESTRAL SPECIES		ENSGT00940000157783 #9	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.m.a.c	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #35
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000160506 #10	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432.m.a.c.c	ENSGT00390000000605.B.a	ENSGT00940000161634 #14	ENSGT00800000124482	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #35
Mus_B	ANCESTRAL SPECIES		ENSGT00940000154432.m.a.c.c.b	ENSGT00940000154432.m.a.c.d	ENSGT00390000000605.A	ENSGT00940000154432.m.b	ENSGT00390000000605.B.a.a	ENSGT00940000161634 #14	ENSGT00800000124482.b.a	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #35
Mouse	MODERN SPECIES	16	Obox7 (ENSMUSG00000055942)	Obox2 (ENSMUSG00000074369)	Obox1 (ENSMUSG00000054310)	Obox3 (ENSMUSG00000066772)	Obox5 (ENSMUSG00000074366)	Obox6 (ENSMUSG00000041583)	Crx (ENSMUSG00000041578) #14	Selenow (ENSMUSG00000041571) #15	Nop53 (ENSMUSG00000041560) #16	Ehd2 (ENSMUSG00000074364) #17	Bicra (ENSMUSG00000070808)	Zfp541 (ENSMUSG00000078796) #18	Napa (ENSMUSG00000006024) #19	Kptn (ENSMUSG00000006021) #20	Slc8a2 (ENSMUSG00000030376) #21	Meis3 (ENSMUSG00000041420) #22	Dhx34 (ENSMUSG00000006019) #23	C5ar2 (ENSMUSG00000074361) #24	C5ar1 (ENSMUSG00000049130) #25	Inafm1 (ENSMUSG00000091811) #26	Ccdc9 (ENSMUSG00000041375) #27	Bbc3 (ENSMUSG00000002083) #28	Sae1 (ENSMUSG00000052833) #29	Zc3h4 (ENSMUSG00000059273) #30	Tmem160 (ENSMUSG00000019158) #31	Npas1 (ENSMUSG00000001988) #32	Arhgap35 (ENSMUSG00000058230) #33	Ceacam15 (ENSMUSG00000078795)	Ceacam9 (ENSMUSG00000007209)	Ap2s1 (ENSMUSG00000008036) #35	Slc1a5 (ENSMUSG00000001918) #36
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000154432.m.a.c.d	ENSGT00390000000605.A	ENSGT00940000154432.m.b	ENSGT01030000234553.b.b.c.a.a.b.b.a.b.b	ENSGT00390000000605.B.a.a	ENSGT00940000161634 #14	ENSGT00800000124482.b.a	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #35
Steppe mouse	MODERN SPECIES	2772					Obox6 (ENSMSIG00000018548)	Crx (ENSMSIG00000018526) #14	ENSMSIG00000018513	Selenow (ENSMSIG00000018481) #15	Nop53 (ENSMSIG00000018430) #16	Ehd2 (ENSMSIG00000018416) #17	Bicra (ENSMSIG00000018350)	Zfp541 (ENSMSIG00000018222) #18	Napa (ENSMSIG00000018190) #19	Kptn (ENSMSIG00000018154) #20	Slc8a2 (ENSMSIG00000018129) #21	Meis3 (ENSMSIG00000018072) #22	Dhx34 (ENSMSIG00000017946) #23	C5ar2 (ENSMSIG00000017934) #24	C5ar1 (ENSMSIG00000017926) #25	Ccdc9 (ENSMSIG00000017868) #27	ENSMSIG00000017856 #28	Sae1 (ENSMSIG00000017811) #29	Zc3h4 (ENSMSIG00000017751) #30	Tmem160 (ENSMSIG00000017740) #31	Npas1 (ENSMSIG00000017698) #32	Arhgap35 (ENSMSIG00000017677) #33	ENSMSIG00000017666	Ceacam15 (ENSMSIG00000017658)	ENSMSIG00000017649	ENSMSIG00000017638 #35
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0029210	Obox8 (MGP_CAROLIEiJ_G0029211)	Sult2a8 (MGP_CAROLIEiJ_G0029212)	MGP_CAROLIEiJ_G0029213	Obox6 (MGP_CAROLIEiJ_G0029214)	Crx (MGP_CAROLIEiJ_G0029215) #14	MGP_CAROLIEiJ_G0029216	MGP_CAROLIEiJ_G0029217 #15	Nop53 (MGP_CAROLIEiJ_G0029218) #16	Ehd2 (MGP_CAROLIEiJ_G0029219) #17	Bicra (MGP_CAROLIEiJ_G0029220)	Zfp541 (MGP_CAROLIEiJ_G0029221) #18	Napa (MGP_CAROLIEiJ_G0029222) #19	Kptn (MGP_CAROLIEiJ_G0029223) #20	Slc8a2 (MGP_CAROLIEiJ_G0029224) #21	Meis3 (MGP_CAROLIEiJ_G0029225) #22	Dhx34 (MGP_CAROLIEiJ_G0029226) #23	C5ar2 (MGP_CAROLIEiJ_G0029227) #24	C5ar1 (MGP_CAROLIEiJ_G0029228) #25	Inafm1 (MGP_CAROLIEiJ_G0029229) #26	Ccdc9 (MGP_CAROLIEiJ_G0029230) #27	Bbc3 (MGP_CAROLIEiJ_G0029231) #28	Sae1 (MGP_CAROLIEiJ_G0029232) #29	MGP_CAROLIEiJ_G0029233 #30	Tmem160 (MGP_CAROLIEiJ_G0029234) #31	Npas1 (MGP_CAROLIEiJ_G0029235) #32	Arhgap35 (MGP_CAROLIEiJ_G0029236) #33	Ceacam15 (MGP_CAROLIEiJ_G0029237)	Ceacam9 (MGP_CAROLIEiJ_G0029238)	Ap2s1 (MGP_CAROLIEiJ_G0029239) #35	Slc1a5 (MGP_CAROLIEiJ_G0029240) #36
Shrew mouse	MODERN SPECIES	10	Zswim9 (MGP_PahariEiJ_G0021066) #8	Lig1 (MGP_PahariEiJ_G0021067) #9	Pla2g4c (MGP_PahariEiJ_G0021068)	Cabp5 (MGP_PahariEiJ_G0021069) #10	Bsph1 (MGP_PahariEiJ_G0021070) #12	MGP_PahariEiJ_G0021071 #13	Crx (MGP_PahariEiJ_G0021072) #14	MGP_PahariEiJ_G0021073 #15	MGP_PahariEiJ_G0021074 #16	Ehd2 (MGP_PahariEiJ_G0021075) #17	Bicra (MGP_PahariEiJ_G0021076)	Zfp541 (MGP_PahariEiJ_G0021077) #18	Napa (MGP_PahariEiJ_G0021078) #19	Kptn (MGP_PahariEiJ_G0021079) #20	Slc8a2 (MGP_PahariEiJ_G0021080) #21	Meis3 (MGP_PahariEiJ_G0021081) #22	Dhx34 (MGP_PahariEiJ_G0021082) #23	C5ar2 (MGP_PahariEiJ_G0021083) #24	C5ar1 (MGP_PahariEiJ_G0021084) #25	Inafm1 (MGP_PahariEiJ_G0021085) #26	Ccdc9 (MGP_PahariEiJ_G0021086) #27	Bbc3 (MGP_PahariEiJ_G0021087) #28	Sae1 (MGP_PahariEiJ_G0021088) #29	Zc3h4 (MGP_PahariEiJ_G0021089) #30	Tmem160 (MGP_PahariEiJ_G0021090) #31	Npas1 (MGP_PahariEiJ_G0021091) #32	Arhgap35 (MGP_PahariEiJ_G0021092) #33	Ceacam15 (MGP_PahariEiJ_G0021093)	Ceacam9 (MGP_PahariEiJ_G0021094)	Ap2s1 (MGP_PahariEiJ_G0021095) #35	Slc1a5 (MGP_PahariEiJ_G0021096) #36
Rat	MODERN SPECIES		Sult2a2 (ENSRNOG00000062869)	ENSRNOG00000066824	AABR07002622.1 (ENSRNOG00000038276)	Obox1 (ENSRNOG00000066811)	Crx (ENSRNOG00000013890) #14	Crxos1 (ENSRNOG00000038251)	LOC100360843 (ENSRNOG00000033146)	LOC100364427 (ENSRNOG00000062534)	Rpl9 (ENSRNOG00000028449)	Nop53 (ENSRNOG00000013023) #16	Ehd2 (ENSRNOG00000011346) #17	Bicra (ENSRNOG00000011262)	Zfp541 (ENSRNOG00000021800) #18	Napa (ENSRNOG00000001494) #19	Slc8a2 (ENSRNOG00000001492) #21	Meis3 (ENSRNOG00000021390) #22	Dhx34 (ENSRNOG00000047575) #23	AABR07002627.1 (ENSRNOG00000060587)	C5ar2 (ENSRNOG00000049028) #24	ENSRNOG00000066925	Inafm1 (ENSRNOG00000048848) #27	Bbc3 (ENSRNOG00000062473) #28	Sae1 (ENSRNOG00000015128) #29	Zc3h4 (ENSRNOG00000015229) #30	Tmem160 (ENSRNOG00000015304) #31	Npas1 (ENSRNOG00000015376) #32	Arhgap35 (ENSRNOG00000015852) #33	Gng5 (ENSRNOG00000063636)	LOC102550403 (ENSRNOG00000065825)	LOC108349752 (ENSRNOG00000028617)	Ceacam9 (ENSRNOG00000046915)
Cricetidae	ANCESTRAL SPECIES	29								ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #35
Cricetidae_B	ANCESTRAL SPECIES	60								ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #35
Northern American deer mouse	MODERN SPECIES		Ethe1 (ENSPEMG00000023092)	Phldb3 (ENSPEMG00000022660)	Lypd3 (ENSPEMG00000021920)	Tex101 (ENSPEMG00000021573)	Cd177 (ENSPEMG00000022001)	ENSPEMG00000027693	ENSPEMG00000031382	Selenow (ENSPEMG00000005090) #15	Nop53 (ENSPEMG00000006856) #16	Ehd2 (ENSPEMG00000024916) #17	Bicra (ENSPEMG00000008834)	Zfp541 (ENSPEMG00000015026) #18	Napa (ENSPEMG00000009721) #19	Kptn (ENSPEMG00000000792) #20	Slc8a2 (ENSPEMG00000002691) #21	Meis3 (ENSPEMG00000005978) #22	Dhx34 (ENSPEMG00000017613) #23	C5ar2 (ENSPEMG00000010321) #24	C5ar1 (ENSPEMG00000001838) #25	Inafm1 (ENSPEMG00000009541) #26	Ccdc9 (ENSPEMG00000015166) #27	Bbc3 (ENSPEMG00000014228) #28	Sae1 (ENSPEMG00000012499) #29	Zc3h4 (ENSPEMG00000009762) #30	Tmem160 (ENSPEMG00000012479) #31	Npas1 (ENSPEMG00000014696) #32	Arhgap35 (ENSPEMG00000017349) #33	ENSPEMG00000031358	Ceacam15 (ENSPEMG00000016683)	ENSPEMG00000008534	Ceacam9 (ENSPEMG00000003127)
Prairie vole	MODERN SPECIES	354	Slc27a5 (ENSMOCG00000004298)	Zbtb45 (ENSMOCG00000001388)	Trim28 (ENSMOCG00000015909)	Chmp2a (ENSMOCG00000003404)	Ube2m (ENSMOCG00000016295)	Mzf1 (ENSMOCG00000011386)	Crx (ENSMOCG00000020933) #14	ENSMOCG00000017884	Nop53 (ENSMOCG00000008367) #16	Ehd2 (ENSMOCG00000007010) #17	Bicra (ENSMOCG00000019348)	Zfp541 (ENSMOCG00000021811) #18	Napa (ENSMOCG00000006244) #19	ENSMOCG00000013711 #20	Slc8a2 (ENSMOCG00000005717) #21	Meis3 (ENSMOCG00000008970) #22	Dhx34 (ENSMOCG00000016843) #23	C5ar2 (ENSMOCG00000004764) #24	Ccdc9 (ENSMOCG00000020124) #27	Bbc3 (ENSMOCG00000017283) #28	ENSMOCG00000016346 #29	Zc3h4 (ENSMOCG00000006492) #30	Tmem160 (ENSMOCG00000016966) #31	Npas1 (ENSMOCG00000014578) #32	Arhgap35 (ENSMOCG00000015867) #33	Ceacam9 (ENSMOCG00000018285)	Ap2s1 (ENSMOCG00000019574) #35	Slc1a5 (ENSMOCG00000009762) #36	Fkrp (ENSMOCG00000022172) #37	Strn4 (ENSMOCG00000000602)	Prkd2 (ENSMOCG00000004684)
Cricetinae	ANCESTRAL SPECIES	49								ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.a	ENSGT00970000193421.A #35	ENSGT00940000159485 #36
Chinese hamster chok1gshd	MODERN SPECIES	341								ENSCGRG00001019284 #15	Nop53 (ENSCGRG00001019033) #16	Ehd2 (ENSCGRG00001018635) #17	Bicra (ENSCGRG00001017944)	Zfp541 (ENSCGRG00001016947) #18	Napa (ENSCGRG00001004279) #19	Kptn (ENSCGRG00001017146) #20	Slc8a2 (ENSCGRG00001013525) #21	Meis3 (ENSCGRG00001010748) #22	ENSCGRG00001017077 #23	Dhx34 (ENSCGRG00001014694) #23	C5ar2 (ENSCGRG00001013288) #24	C5ar1 (ENSCGRG00001012882) #25	Inafm1 (ENSCGRG00001010104) #26	Ccdc9 (ENSCGRG00001007536) #27	Bbc3 (ENSCGRG00001017224) #28	Sae1 (ENSCGRG00001016314) #29	Zc3h4 (ENSCGRG00001016116) #30	Tmem160 (ENSCGRG00001014723) #31	Npas1 (ENSCGRG00001013611) #32	Arhgap35 (ENSCGRG00001013301) #33	Ceacam15 (ENSCGRG00001017353)	Ceacam9 (ENSCGRG00001017245)	Ap2s1 (ENSCGRG00001015937) #35
Golden Hamster	MODERN SPECIES	836								Selenow (ENSMAUG00000014624) #15	Nop53 (ENSMAUG00000012617) #16	Ehd2 (ENSMAUG00000010317) #17	Bicra (ENSMAUG00000015992)	Zfp541 (ENSMAUG00000012586) #18	Napa (ENSMAUG00000008333) #19	ENSMAUG00000000883 #20	Slc8a2 (ENSMAUG00000010121) #21	Meis3 (ENSMAUG00000014202) #22	Dhx34 (ENSMAUG00000013394) #23	C5ar2 (ENSMAUG00000006533) #24	C5ar1 (ENSMAUG00000003322) #25	ENSMAUG00000003963 #27	Bbc3 (ENSMAUG00000009202) #28	Sae1 (ENSMAUG00000007765) #29	ENSMAUG00000000957	Zc3h4 (ENSMAUG00000000068) #30	Tmem160 (ENSMAUG00000000893) #31	Npas1 (ENSMAUG00000001894) #32	Arhgap35 (ENSMAUG00000000172) #33	ENSMAUG00000009227	ENSMAUG00000008055	Ap2s1 (ENSMAUG00000019505) #35	Slc1a5 (ENSMAUG00000017083) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	501								Selenow (ENSNGAG00000001219) #15	Nop53 (ENSNGAG00000019894) #16	Ehd2 (ENSNGAG00000018699) #17	Bicra (ENSNGAG00000012259)	Zfp541 (ENSNGAG00000022695) #18	Napa (ENSNGAG00000000817) #19	ENSNGAG00000023937 #20	Slc8a2 (ENSNGAG00000011676) #21	Meis3 (ENSNGAG00000018810) #22	Dhx34 (ENSNGAG00000012974) #23	C5ar2 (ENSNGAG00000010859) #24	C5ar1 (ENSNGAG00000009652) #25	ENSNGAG00000007282	Bbc3 (ENSNGAG00000004788) #28	ENSNGAG00000001209 #29	Zc3h4 (ENSNGAG00000020090) #30	Tmem160 (ENSNGAG00000019488) #31	Npas1 (ENSNGAG00000018097) #32	Arhgap35 (ENSNGAG00000016819) #33	Hif3a (ENSNGAG00000014207)	Ppp5c (ENSNGAG00000012794)	Pnma8a (ENSNGAG00000008259)	Pnma8b (ENSNGAG00000008913)	ENSNGAG00000004089
Lesser Egyptian jerboa	MODERN SPECIES	257					ENSJJAG00000011866	Plekhf2 (ENSJJAG00000011954)	Crx (ENSJJAG00000014071) #14	Selenow (ENSJJAG00000007708) #15	Nop53 (ENSJJAG00000007854) #16	Ehd2 (ENSJJAG00000008621) #17	Bicra (ENSJJAG00000008900)	Zfp541 (ENSJJAG00000010932) #18	Napa (ENSJJAG00000011931) #19	ENSJJAG00000012597 #20	Slc8a2 (ENSJJAG00000013489) #21	Meis3 (ENSJJAG00000013989) #22	ENSJJAG00000013190
Kangaroo rat	MODERN SPECIES	475								Crx (ENSDORG00000027827) #14	ENSDORG00000016339 #16	Ehd2 (ENSDORG00000011700) #17	Bicra (ENSDORG00000025123)	Zfp541 (ENSDORG00000028161) #18	Napa (ENSDORG00000009995) #19	ENSDORG00000009993 #20	Slc8a2 (ENSDORG00000009991) #21	Meis3 (ENSDORG00000008441) #22	Dhx34 (ENSDORG00000008437) #23	C5ar1 (ENSDORG00000030050) #25	ENSDORG00000024050	ENSDORG00000029325	Sae1 (ENSDORG00000012199) #29	Zc3h4 (ENSDORG00000002726) #30	Tmem160 (ENSDORG00000002725) #31	Npas1 (ENSDORG00000002722) #32	Arhgap35 (ENSDORG00000001800) #33	Ap2s1 (ENSDORG00000015282) #35	Slc1a5 (ENSDORG00000008810) #36	Strn4 (ENSDORG00000005407)	Prkd2 (ENSDORG00000005405)	ENSDORG00000005404	Gng8 (ENSDORG00000005403)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432.n	ENSGT00940000163805 #13	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Sciuridae	ANCESTRAL SPECIES	5			ENSGT00940000163805 #13	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432.n	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a.j
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000154432.n.h.a.b.a.b.a	ENSGT00940000163003 #12	ENSGT00940000154432.n.h.a.b.b	ENSGT00940000154432.n.h.a.a	ENSGT00940000163805 #13	ENSGT00940000154432.n.g	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a.j
Marmotini_b	ANCESTRAL SPECIES	22	ENSGT00940000154432.n.h.a.b.a.b.a	ENSGT00940000154432.n.h.a.b.a.a	ENSGT00940000163003 #12	ENSGT00940000154432.n.h.a.b.b	ENSGT00940000154432.n.h.a.a	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a.j
Squirrel	MODERN SPECIES	264	ENSSTOG00000020452	ENSSTOG00000023396	ENSSTOG00000020676	BSPH1 (ENSSTOG00000034649) #12	ENSSTOG00000025647	ENSSTOG00000022010	ENSSTOG00000021552 #13	CRX (ENSSTOG00000024356) #14	NOP53 (ENSSTOG00000022092) #16	ENSSTOG00000011087 #17	BICRA (ENSSTOG00000028398)	ZNF541 (ENSSTOG00000026879) #18	NAPA (ENSSTOG00000006983) #19	KPTN (ENSSTOG00000006963) #20	SLC8A2 (ENSSTOG00000020165) #21	MEIS3 (ENSSTOG00000028182) #22	DHX34 (ENSSTOG00000015831) #23	C5AR2 (ENSSTOG00000023346) #24	C5AR1 (ENSSTOG00000026678) #25	ENSSTOG00000005813 #27	SAE1 (ENSSTOG00000016251) #29	ZC3H4 (ENSSTOG00000016249) #30	TMEM160 (ENSSTOG00000024623) #31	NPAS1 (ENSSTOG00000003396) #32	ARHGAP35 (ENSSTOG00000011409) #33	SLC1A5 (ENSSTOG00000028576) #36	FKRP (ENSSTOG00000027896) #37	STRN4 (ENSSTOG00000025660)	PRKD2 (ENSSTOG00000026693)	ENSSTOG00000028905	GNG8 (ENSSTOG00000024152)
Arctic ground squirrel	MODERN SPECIES	455							CRX (ENSUPAG00010010106) #14	ENSUPAG00010010102 #15	NOP53 (ENSUPAG00010010094) #16	EHD2 (ENSUPAG00010010085) #17	BICRA (ENSUPAG00010010059)	ZNF541 (ENSUPAG00010010048) #18	NAPA (ENSUPAG00010010015) #19	KPTN (ENSUPAG00010010006) #20	SLC8A2 (ENSUPAG00010009969) #21	MEIS3 (ENSUPAG00010009940) #22	DHX34 (ENSUPAG00010009871) #23	C5AR2 (ENSUPAG00010009867) #24	C5AR1 (ENSUPAG00010009863) #25	INAFM1 (ENSUPAG00010009857) #26	CCDC9 (ENSUPAG00010009846) #27	BBC3 (ENSUPAG00010009844) #28	SAE1 (ENSUPAG00010009824) #29	ZC3H4 (ENSUPAG00010009793) #30	TMEM160 (ENSUPAG00010009790) #31	NPAS1 (ENSUPAG00010009764) #32	ARHGAP35 (ENSUPAG00010009739) #33	AP2S1 (ENSUPAG00010009722) #35	SLC1A5 (ENSUPAG00010009701) #36	STRN4 (ENSUPAG00010009670)	PRKD2 (ENSUPAG00010009657)
Alpin marmot	MODERN SPECIES	45	ENSMMMG00000012846	ENSMMMG00000012847	ENSMMMG00000012878	ENSMMMG00000013050	ENSMMMG00000013103 #13	ENSMMMG00000013119	CRX (ENSMMMG00000013129) #14	SELENOW (ENSMMMG00000013140) #15	ENSMMMG00000013145 #16	EHD2 (ENSMMMG00000013147) #17	BICRA (ENSMMMG00000013156)	ZNF541 (ENSMMMG00000013251) #18	NAPA (ENSMMMG00000013273) #19	KPTN (ENSMMMG00000013277) #20	SLC8A2 (ENSMMMG00000013339) #21	MEIS3 (ENSMMMG00000013369) #22	DHX34 (ENSMMMG00000013402) #23	C5AR2 (ENSMMMG00000013488) #24	C5AR1 (ENSMMMG00000013493) #25	CCDC9 (ENSMMMG00000013499) #27	SAE1 (ENSMMMG00000013566) #29	ZC3H4 (ENSMMMG00000013587) #30	ENSMMMG00000013602	NPAS1 (ENSMMMG00000013606) #32	ARHGAP35 (ENSMMMG00000013646) #33	AP2S1 (ENSMMMG00000013659) #35	SLC1A5 (ENSMMMG00000013678) #36	FKRP (ENSMMMG00000013696) #37	STRN4 (ENSMMMG00000013698)	PRKD2 (ENSMMMG00000013741)	ENSMMMG00000013782
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005015636	ENSSVLG00005015448	ENSSVLG00005014930	ENSSVLG00005014859	ENSSVLG00005014702	ENSSVLG00005014636 #13	CRX (ENSSVLG00005014575) #14	SELENOW (ENSSVLG00005014510) #15	NOP53 (ENSSVLG00005014437) #16	EHD2 (ENSSVLG00005014364) #17	BICRA (ENSSVLG00005013976)	ZNF541 (ENSSVLG00005013491) #18	NAPA (ENSSVLG00005012991) #19	KPTN (ENSSVLG00005012899) #20	SLC8A2 (ENSSVLG00005012674) #21	MEIS3 (ENSSVLG00005012542) #22	DHX34 (ENSSVLG00005012498) #23	C5AR2 (ENSSVLG00005012478) #24	C5AR1 (ENSSVLG00005012437) #25	ENSSVLG00005012324	CCDC9 (ENSSVLG00005012213) #27	BBC3 (ENSSVLG00005012098) #28	SAE1 (ENSSVLG00005011951) #29	ZC3H4 (ENSSVLG00005011727) #30	TMEM160 (ENSSVLG00005011672) #31	NPAS1 (ENSSVLG00005011606) #32	ARHGAP35 (ENSSVLG00005011555) #33	AP2S1 (ENSSVLG00005011272) #35	ENSSVLG00005011219	SLC1A5 (ENSSVLG00005010966) #36	FKRP (ENSSVLG00005010926) #37
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163805 #13	ENSGT00940000154432.m.a.b	ENSGT00940000154432.m.a.a	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	39							ENSGT00940000154432.m.a.a	ENSGT00940000161634 #14	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00940000167173	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Guinea pig	MODERN SPECIES	80					Std1 (ENSCPOG00000003036)	Std2 (ENSCPOG00000034234)	ENSCPOG00000034667	CRX (ENSCPOG00000036687) #14	NOP53 (ENSCPOG00000015665) #16	EHD2 (ENSCPOG00000026417) #17	BICRA (ENSCPOG00000015610)	ZNF541 (ENSCPOG00000020622) #18	NAPA (ENSCPOG00000010617) #19	KPTN (ENSCPOG00000010615) #20	SLC8A2 (ENSCPOG00000010035) #21	MEIS3 (ENSCPOG00000026589) #22	DHX34 (ENSCPOG00000006510) #23	C5AR2 (ENSCPOG00000010536) #24	C5AR1 (ENSCPOG00000030913) #25	INAFM1 (ENSCPOG00000034661) #26	ENSCPOG00000008209	SAE1 (ENSCPOG00000021581) #29	ZC3H4 (ENSCPOG00000036659) #30	TMEM160 (ENSCPOG00000015280) #31	NPAS1 (ENSCPOG00000023069) #32	ARHGAP35 (ENSCPOG00000013236) #33	AP2S1 (ENSCPOG00000026801) #35	SLC1A5 (ENSCPOG00000004326) #36	FKRP (ENSCPOG00000036590) #37	STRN4 (ENSCPOG00000001053)	PRKD2 (ENSCPOG00000003294)
Hystricomorpha_b	ANCESTRAL SPECIES	49								ENSGT00940000161634 #14	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #25	ENSGT00940000167173	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b
Long-tailed chinchilla	MODERN SPECIES	281								CRX (ENSCLAG00000001963) #14	NOP53 (ENSCLAG00000001860) #16	EHD2 (ENSCLAG00000001756) #17	BICRA (ENSCLAG00000000673)	ZNF541 (ENSCLAG00000001489) #18	NAPA (ENSCLAG00000001379) #19	KPTN (ENSCLAG00000001346) #20	SLC8A2 (ENSCLAG00000000972) #21	MEIS3 (ENSCLAG00000000719) #22	DHX34 (ENSCLAG00000000906) #23	C5AR1 (ENSCLAG00000001064) #25	ENSCLAG00000000680	BBC3 (ENSCLAG00000000578) #28	SAE1 (ENSCLAG00000000507) #29	ENSCLAG00000000483	ZC3H4 (ENSCLAG00000001032) #30	TMEM160 (ENSCLAG00000000918) #31	NPAS1 (ENSCLAG00000000717) #32	ARHGAP35 (ENSCLAG00000002385) #33	AP2S1 (ENSCLAG00000002250) #35	ENSCLAG00000002077 #36	FKRP (ENSCLAG00000001845) #37	STRN4 (ENSCLAG00000001542)	PRKD2 (ENSCLAG00000001395)
Degu	MODERN SPECIES	238								CRX (ENSODEG00000006452) #14	NOP53 (ENSODEG00000006707) #16	EHD2 (ENSODEG00000006641) #17	BICRA (ENSODEG00000009243)	ZNF541 (ENSODEG00000005850) #18	NAPA (ENSODEG00000008511) #19	ENSODEG00000009127 #20	SLC8A2 (ENSODEG00000007313) #21	MEIS3 (ENSODEG00000006485) #22	DHX34 (ENSODEG00000006333) #23	ENSODEG00000008542	ENSODEG00000009476	BBC3 (ENSODEG00000006470) #28	ENSODEG00000006581 #29	ZC3H4 (ENSODEG00000008320) #30	TMEM160 (ENSODEG00000009538) #31	NPAS1 (ENSODEG00000006878) #32	ARHGAP35 (ENSODEG00000007178) #33	AP2S1 (ENSODEG00000006649) #35	SLC1A5 (ENSODEG00000007341) #36	FKRP (ENSODEG00000019605) #37	STRN4 (ENSODEG00000009103)	PRKD2 (ENSODEG00000006559)	ENSODEG00000006767
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000015393 #10	ELSPBP1 (ENSHGLG00000015441) #11	ENSHGLG00000015622 #13	ENSHGLG00000018150	SULT2A1 (ENSHGLG00000013462)	ENSHGLG00000034800	ENSHGLG00000048960	CRX (ENSHGLG00000013944) #14	ENSHGLG00000037909 #15	NOP53 (ENSHGLG00000018240) #16	EHD2 (ENSHGLG00000017825) #17	ZNF541 (ENSHGLG00000017589) #18	NAPA (ENSHGLG00000017294) #19	KPTN (ENSHGLG00000013757) #20	SLC8A2 (ENSHGLG00000017722) #21	MEIS3 (ENSHGLG00000018600) #22	DHX34 (ENSHGLG00000004917) #23	C5AR2 (ENSHGLG00000045362) #24	C5AR1 (ENSHGLG00000005545) #25	CCDC9 (ENSHGLG00000006240) #27	BBC3 (ENSHGLG00000050947) #28	SAE1 (ENSHGLG00000007950) #29	ZC3H4 (ENSHGLG00000008600) #30	TMEM160 (ENSHGLG00000009284) #31	NPAS1 (ENSHGLG00000009357) #32	ARHGAP35 (ENSHGLG00000010970) #33	AP2S1 (ENSHGLG00000018471) #35	SLC1A5 (ENSHGLG00000013744) #36	FKRP (ENSHGLG00000017783) #37	STRN4 (ENSHGLG00000015771)	PRKD2 (ENSHGLG00000017425)
Primates	ANCESTRAL SPECIES	15	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Tarsier	MODERN SPECIES	2205																MEIS3 (ENSTSYG00000028178) #22	DHX34 (ENSTSYG00000031168) #23
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069.e.b #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Platyrrhini	ANCESTRAL SPECIES	20	ENSGT00390000011694 #8	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000154432.g	ENSGT00940000161634 #14	ENSGT00940000161069.e.b #15	ENSGT00940000161069.e.a #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000157783 #9	ENSGT00390000011694 #8	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000154432.g	ENSGT00940000161634 #14	ENSGT00940000161069.e.b #15	ENSGT00940000161069.e.a #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Marmoset	MODERN SPECIES	14	CARD8 (ENSCJAG00000000489) #7	LIG1 (ENSCJAG00000000504) #9	ENSCJAG00000076045 #8	ENSCJAG00000071055 #8	CABP5 (ENSCJAG00000008133) #10	SULT2A1 (ENSCJAG00000005269)	CRX (ENSCJAG00000078298) #14	SELENOW (ENSCJAG00000043185) #15	NOP53 (ENSCJAG00000011385) #16	EHD2 (ENSCJAG00000011415) #17	BICRA (ENSCJAG00000011418)	ZNF541 (ENSCJAG00000011435) #18	NAPA (ENSCJAG00000042205) #19	KPTN (ENSCJAG00000011460) #20	SLC8A2 (ENSCJAG00000070619) #21	MEIS3 (ENSCJAG00000011475) #22	DHX34 (ENSCJAG00000011504) #23	ENSCJAG00000072119	C5AR2 (ENSCJAG00000011534) #24	C5AR1 (ENSCJAG00000073054) #25	INAFM1 (ENSCJAG00000074475) #26	CCDC9 (ENSCJAG00000011548) #27	ENSCJAG00000083080	SAE1 (ENSCJAG00000011565) #29	ZC3H4 (ENSCJAG00000011601) #30	TMEM160 (ENSCJAG00000082760) #31	NPAS1 (ENSCJAG00000076811) #32	ARHGAP35 (ENSCJAG00000011701) #33	ENSCJAG00000072578	ENSCJAG00000011710 #35	SLC1A5 (ENSCJAG00000011717) #36
Cebidae_a	ANCESTRAL SPECIES	20	ENSGT00830000128447 #7	ENSGT00940000157783 #9	ENSGT00390000011694 #8	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000154432.g	ENSGT00940000161634 #14	ENSGT00940000161069.e.a #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b
Capuchin	MODERN SPECIES	266	ENSCCAG00000030878	LIG1 (ENSCCAG00000022254) #9	ZSWIM9 (ENSCCAG00000022754) #8	CABP5 (ENSCCAG00000029328) #10	ENSCCAG00000027792 #11	SULT2A1 (ENSCCAG00000020859)	CRX (ENSCCAG00000034793) #14	ENSCCAG00000024879 #15	NOP53 (ENSCCAG00000025477) #16	EHD2 (ENSCCAG00000035777) #17	BICRA (ENSCCAG00000026467)	ZNF541 (ENSCCAG00000037140) #18	NAPA (ENSCCAG00000033321) #19	KPTN (ENSCCAG00000027753) #20	SLC8A2 (ENSCCAG00000014965) #21	MEIS3 (ENSCCAG00000003816) #22	DHX34 (ENSCCAG00000028675) #23	C5AR1 (ENSCCAG00000035091) #25	CCDC9 (ENSCCAG00000028908) #27	ENSCCAG00000026596	SAE1 (ENSCCAG00000031780) #29	ZC3H4 (ENSCCAG00000037597) #30	TMEM160 (ENSCCAG00000031011) #31	NPAS1 (ENSCCAG00000032406) #32	ENSCCAG00000021097	ARHGAP35 (ENSCCAG00000022601) #33	AP2S1 (ENSCCAG00000028431) #35	SLC1A5 (ENSCCAG00000033717) #36	FKRP (ENSCCAG00000015087) #37	STRN4 (ENSCCAG00000034066)	PRKD2 (ENSCCAG00000032043)
Mas night monkey	MODERN SPECIES	1284	LIG1 (ENSANAG00000025847) #9	ZSWIM9 (ENSANAG00000037000) #8	CABP5 (ENSANAG00000036055) #10	ELSPBP1 (ENSANAG00000021618) #11	SULT2A1 (ENSANAG00000008443)	CRX (ENSANAG00000036213) #14	ENSANAG00000038368	NOP53 (ENSANAG00000007933) #16	EHD2 (ENSANAG00000031077) #17	BICRA (ENSANAG00000021909)	ZNF541 (ENSANAG00000034121) #18	NAPA (ENSANAG00000029662) #19	KPTN (ENSANAG00000030248) #20	SLC8A2 (ENSANAG00000033218) #21	ENSANAG00000034504	MEIS3 (ENSANAG00000037100) #22	DHX34 (ENSANAG00000038287) #23	C5AR1 (ENSANAG00000031163) #25	INAFM1 (ENSANAG00000035853) #26	CCDC9 (ENSANAG00000020361) #27	ENSANAG00000037922	SAE1 (ENSANAG00000023379) #29	ZC3H4 (ENSANAG00000023963) #30	TMEM160 (ENSANAG00000026707) #31	NPAS1 (ENSANAG00000036771) #32	ARHGAP35 (ENSANAG00000000237) #33	ENSANAG00000022565	AP2S1 (ENSANAG00000024767) #35	SLC1A5 (ENSANAG00000021437) #36	FKRP (ENSANAG00000019314) #37	STRN4 (ENSANAG00000032421)
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.i.b #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007.i.b #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.i.b.b #29	ENSGT00550000075007.j #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007.i.b.a #29	ENSGT00390000002767 #28	ENSGT00550000075007.j #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36
Macaca	ANCESTRAL SPECIES	12	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.j #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.a.d	ENSGT00940000157783 #9	ENSGT01030000234606.a.b.d	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00390000017267.j #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.j #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Rhesus	MODERN SPECIES	10	PLA2G4C (ENSMMUG00000014293)	ELSPBP1 (ENSMMUG00000006857) #11	BSPH1 (ENSMMUG00000058643) #12	SULT2A1 (ENSMMUG00000056800)	ENSMMUG00000059253	CRX (ENSMMUG00000049999) #14	TPRX1 (ENSMMUG00000048019)	ENSMMUG00000061457	NOP53 (ENSMMUG00000013348) #16	EHD2 (ENSMMUG00000040121) #17	BICRA (ENSMMUG00000019356)	ZNF541 (ENSMMUG00000014729) #18	NAPA (ENSMMUG00000014727) #19	KPTN (ENSMMUG00000014723) #20	SLC8A2 (ENSMMUG00000014718) #21	MEIS3 (ENSMMUG00000013009) #22	DHX34 (ENSMMUG00000009275) #23	C5AR2 (ENSMMUG00000009277) #24	C5AR1 (ENSMMUG00000009278) #25	CCDC9 (ENSMMUG00000003075) #27	ENSMMUG00000012466	ENSMMUG00000055893	SAE1 (ENSMMUG00000009506) #29	ZC3H4 (ENSMMUG00000014709) #30	TMEM160 (ENSMMUG00000057454) #31	NPAS1 (ENSMMUG00000011330) #32	ARHGAP35 (ENSMMUG00000011332) #33	AP2S1 (ENSMMUG00000000833) #35	SLC1A5 (ENSMMUG00000022163) #36	FKRP (ENSMMUG00000028743) #37	STRN4 (ENSMMUG00000017930)
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000061337	LIG1 (ENSMFAG00000010948) #9	PLA2G4C (ENSMFAG00000045458)	ENSMFAG00000035166 #11	SULT2A1 (ENSMFAG00000046325)	ENSMFAG00000052649	CRX (ENSMFAG00000039279) #14	SELENOW (ENSMFAG00000057852) #15	ENSMFAG00000051508	NOP53 (ENSMFAG00000045103) #16	EHD2 (ENSMFAG00000045476) #17	ZNF541 (ENSMFAG00000008705) #18	NAPA (ENSMFAG00000000053) #19	KPTN (ENSMFAG00000039746) #20	SLC8A2 (ENSMFAG00000037527) #21	MEIS3 (ENSMFAG00000034069) #22	C5AR2 (ENSMFAG00000064310) #24	C5AR1 (ENSMFAG00000064601) #25	CCDC9 (ENSMFAG00000002381) #27	BBC3 (ENSMFAG00000033464) #28	SAE1 (ENSMFAG00000046126) #29	ENSMFAG00000048737	ENSMFAG00000001653 #31	NPAS1 (ENSMFAG00000018045) #32	ARHGAP35 (ENSMFAG00000041192) #33	AP2S1 (ENSMFAG00000022670) #35	SLC1A5 (ENSMFAG00000044927) #36	STRN4 (ENSMFAG00000035843)	PRKD2 (ENSMFAG00000045883)	ENSMFAG00000030779	ENSMFAG00000044510
Pig-tailed macaque	MODERN SPECIES	551	PLA2G4C (ENSMNEG00000029999)	CABP5 (ENSMNEG00000029058) #10	ELSPBP1 (ENSMNEG00000027813) #11	BSPH1 (ENSMNEG00000029609) #12	SULT2A1 (ENSMNEG00000038830)	CRX (ENSMNEG00000032189) #14	TPRX1 (ENSMNEG00000041107)	SELENOW (ENSMNEG00000035729) #15	ENSMNEG00000042540 #16	EHD2 (ENSMNEG00000029528) #17	BICRA (ENSMNEG00000045550)	ZNF541 (ENSMNEG00000031984) #18	NAPA (ENSMNEG00000033334) #19	KPTN (ENSMNEG00000035130) #20	SLC8A2 (ENSMNEG00000032344) #21	MEIS3 (ENSMNEG00000045404) #22	DHX34 (ENSMNEG00000038649) #23	C5AR1 (ENSMNEG00000040235) #25	CCDC9 (ENSMNEG00000029240) #27	ENSMNEG00000009958	ENSMNEG00000024262 #29	ZC3H4 (ENSMNEG00000039406) #30	TMEM160 (ENSMNEG00000026327) #31	NPAS1 (ENSMNEG00000038438) #32	ARHGAP35 (ENSMNEG00000029940) #33	AP2S1 (ENSMNEG00000036216) #35	SLC1A5 (ENSMNEG00000040803) #36	FKRP (ENSMNEG00000013306) #37	STRN4 (ENSMNEG00000042544)	PRKD2 (ENSMNEG00000038676)	DACT3 (ENSMNEG00000005969)
Cercopithecinae_b	ANCESTRAL SPECIES	23	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007.i.b.a #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Cercopithecinae_d	ANCESTRAL SPECIES	9	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007.i.b.a #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b
Sooty mangabey	MODERN SPECIES	228	PLA2G4C (ENSCATG00000014087)	CABP5 (ENSCATG00000038717) #10	ELSPBP1 (ENSCATG00000039398) #11	BSPH1 (ENSCATG00000035095) #12	SULT2A1 (ENSCATG00000030367)	CRX (ENSCATG00000042146) #14	TPRX1 (ENSCATG00000035099)	SELENOW (ENSCATG00000023895) #15	ENSCATG00000032842 #16	EHD2 (ENSCATG00000013287) #17	BICRA (ENSCATG00000043087)	ZNF541 (ENSCATG00000036460) #18	NAPA (ENSCATG00000039365) #19	KPTN (ENSCATG00000031555) #20	SLC8A2 (ENSCATG00000019815) #21	MEIS3 (ENSCATG00000044534) #22	DHX34 (ENSCATG00000032316) #23	C5AR1 (ENSCATG00000032999) #25	CCDC9 (ENSCATG00000023465) #27	ENSCATG00000044506	SAE1 (ENSCATG00000041175) #29	ZC3H4 (ENSCATG00000039046) #30	TMEM160 (ENSCATG00000017019) #31	NPAS1 (ENSCATG00000044490) #32	ARHGAP35 (ENSCATG00000025751) #33	AP2S1 (ENSCATG00000030501) #35	SLC1A5 (ENSCATG00000041986) #36	FKRP (ENSCATG00000015421) #37	STRN4 (ENSCATG00000041998)	PRKD2 (ENSCATG00000012657)	DACT3 (ENSCATG00000028958)
Drill	MODERN SPECIES	254	ENSMLEG00000013732 #8	LIG1 (ENSMLEG00000024179) #9	PLA2G4C (ENSMLEG00000035538)	CABP5 (ENSMLEG00000029590) #10	ELSPBP1 (ENSMLEG00000044354) #11	SULT2A1 (ENSMLEG00000014855)	CRX (ENSMLEG00000010899) #14	SELENOW (ENSMLEG00000014481) #15	ENSMLEG00000032475 #16	EHD2 (ENSMLEG00000044265) #17	BICRA (ENSMLEG00000030433)	ZNF541 (ENSMLEG00000029328) #18	NAPA (ENSMLEG00000044028) #19	KPTN (ENSMLEG00000038643) #20	SLC8A2 (ENSMLEG00000041982) #21	MEIS3 (ENSMLEG00000034525) #22	DHX34 (ENSMLEG00000041860) #23	C5AR1 (ENSMLEG00000034392) #25	CCDC9 (ENSMLEG00000042193) #27	ENSMLEG00000038746	ENSMLEG00000042254 #29	ZC3H4 (ENSMLEG00000007946) #30	ENSMLEG00000038871 #32	ARHGAP35 (ENSMLEG00000042586) #33	AP2S1 (ENSMLEG00000034145) #35	SLC1A5 (ENSMLEG00000039768) #36	STRN4 (ENSMLEG00000039813)	PRKD2 (ENSMLEG00000041161)	ENSMLEG00000042860	GNG8 (ENSMLEG00000041963)	PTGIR (ENSMLEG00000039111)
Vervet Monkey	MODERN SPECIES	25	LIG1 (ENSCSAG00000002897) #9	PLA2G4C (ENSCSAG00000002903)	CABP5 (ENSCSAG00000002905) #10	ELSPBP1 (ENSCSAG00000002911) #11	BSPH1 (ENSCSAG00000002916) #12	SULT2A1 (ENSCSAG00000002919)	CRX (ENSCSAG00000002921) #14	SELENOW (ENSCSAG00000002926) #15	ENSCSAG00000002928 #16	EHD2 (ENSCSAG00000002930) #17	BICRA (ENSCSAG00000002933)	ENSCSAG00000002936 #18	NAPA (ENSCSAG00000002939) #19	KPTN (ENSCSAG00000002944) #20	SLC8A2 (ENSCSAG00000002946) #21	MEIS3 (ENSCSAG00000002950) #22	DHX34 (ENSCSAG00000002965) #23	C5AR2 (ENSCSAG00000019638) #24	C5AR1 (ENSCSAG00000002973) #25	ENSCSAG00000019637	CCDC9 (ENSCSAG00000002974) #27	BBC3 (ENSCSAG00000002981) #28	SAE1 (ENSCSAG00000002984) #29	ZC3H4 (ENSCSAG00000002989) #30	TMEM160 (ENSCSAG00000002993) #31	NPAS1 (ENSCSAG00000003006) #32	ARHGAP35 (ENSCSAG00000003015) #33	ENSCSAG00000019636	ENSCSAG00000003016 #36	FKRP (ENSCSAG00000019635) #37	STRN4 (ENSCSAG00000003022)
Rhinopithecus	ANCESTRAL SPECIES	16	ENSGT01030000234606.a.b.d	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00710000107236	ENSGT00550000075007.i.b #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Black snub-nosed monkey	MODERN SPECIES	111	PLA2G4C (ENSRBIG00000031023)	CABP5 (ENSRBIG00000043674) #10	ELSPBP1 (ENSRBIG00000039740) #11	BSPH1 (ENSRBIG00000043547) #12	SULT2A1 (ENSRBIG00000035608)	ENSRBIG00000039568	TPRX1 (ENSRBIG00000031002)	SELENOW (ENSRBIG00000031185) #15	ENSRBIG00000036427 #16	EHD2 (ENSRBIG00000035965) #17	BICRA (ENSRBIG00000039397)	ZNF541 (ENSRBIG00000027044) #18	NAPA (ENSRBIG00000027994) #19	KPTN (ENSRBIG00000039197) #20	SLC8A2 (ENSRBIG00000030127) #21	MEIS3 (ENSRBIG00000027626) #22	DHX34 (ENSRBIG00000037382) #23	CCDC9 (ENSRBIG00000035248) #27	ENSRBIG00000031139	SAE1 (ENSRBIG00000037933) #29	ZC3H4 (ENSRBIG00000027984) #30	TMEM160 (ENSRBIG00000039420) #31	NPAS1 (ENSRBIG00000042290) #32	ENSRBIG00000034879	ENSRBIG00000029587	AACS (ENSRBIG00000039115)	BRI3BP (ENSRBIG00000032003)	DHX37 (ENSRBIG00000043457)	ENSRBIG00000028284	ENSRBIG00000023396	SCARB1 (ENSRBIG00000041753)
Golden snub-nosed monkey	MODERN SPECIES	2027	PLA2G4C (ENSRROG00000042138)	CABP5 (ENSRROG00000042418) #10	ELSPBP1 (ENSRROG00000042315) #11	BSPH1 (ENSRROG00000045761) #12	SULT2A1 (ENSRROG00000034211)	CRX (ENSRROG00000025759) #14	TPRX1 (ENSRROG00000043121)	SELENOW (ENSRROG00000030554) #15	ENSRROG00000042298 #16	EHD2 (ENSRROG00000043148) #17	BICRA (ENSRROG00000026604)	ZNF541 (ENSRROG00000044146) #18	NAPA (ENSRROG00000037389) #19	KPTN (ENSRROG00000036495) #20	SLC8A2 (ENSRROG00000045566) #21	MEIS3 (ENSRROG00000029017) #22	DHX34 (ENSRROG00000042872) #23	C5AR1 (ENSRROG00000034629) #25	INAFM1 (ENSRROG00000036821) #26	CCDC9 (ENSRROG00000025974) #27	ENSRROG00000040712	SAE1 (ENSRROG00000031746) #29	ZC3H4 (ENSRROG00000032920) #30	TMEM160 (ENSRROG00000043669) #31	NPAS1 (ENSRROG00000043828) #32	ARHGAP35 (ENSRROG00000035853) #33	AP2S1 (ENSRROG00000045451) #35	SLC1A5 (ENSRROG00000038480) #36	FKRP (ENSRROG00000007497) #37	STRN4 (ENSRROG00000042099)	PRKD2 (ENSRROG00000034944)
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00960000191916	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.a.a #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.i.b #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Gibbon	MODERN SPECIES	7	CATSPERD (ENSNLEG00000013718)	ENSNLEG00000013730	DUS3L (ENSNLEG00000013734)	NRTN (ENSNLEG00000013785)	ENSNLEG00000034850	ENSNLEG00000013795	ENSNLEG00000003385	ENSNLEG00000030217 #15	ENSNLEG00000003143 #16	ENSNLEG00000034480 #17	ENSNLEG00000003119	ENSNLEG00000034044 #18	ENSNLEG00000031845	KPTN (ENSNLEG00000003092) #20	ENSNLEG00000003082 #21	MEIS3 (ENSNLEG00000003031) #22	DHX34 (ENSNLEG00000003010) #23	C5AR1 (ENSNLEG00000018412) #25	INAFM1 (ENSNLEG00000018411) #26	CCDC9 (ENSNLEG00000002990) #27	ENSNLEG00000018410	ENSNLEG00000002975	SAE1 (ENSNLEG00000002965) #29	ZC3H4 (ENSNLEG00000034259) #30	TMEM160 (ENSNLEG00000002960) #31	NPAS1 (ENSNLEG00000002946) #32	ARHGAP35 (ENSNLEG00000002923) #33	AP2S1 (ENSNLEG00000002895) #35	ENSNLEG00000029695 #36	ENSNLEG00000035781 #37	STRN4 (ENSNLEG00000002817)
Hominidae	ANCESTRAL SPECIES		ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00960000191916	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b #15	ENSGT00390000017267.i.a.a #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.i.b #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Orangutan	MODERN SPECIES	10	ENSPPYG00000010188	PLA2G4C (ENSPPYG00000010187)	CABP5 (ENSPPYG00000010186) #10	ELSPBP1 (ENSPPYG00000010185) #11	BSPH1 (ENSPPYG00000035619) #12	SULT2A1 (ENSPPYG00000010184)	ENSPPYG00000030562	SELENOW (ENSPPYG00000010182) #15	ENSPPYG00000010181 #16	EHD2 (ENSPPYG00000010180) #17	BICRA (ENSPPYG00000010179)	ZNF541 (ENSPPYG00000010178) #18	NAPA (ENSPPYG00000010177) #19	KPTN (ENSPPYG00000010176) #20	SLC8A2 (ENSPPYG00000010175) #21	MEIS3 (ENSPPYG00000010173) #22	DHX34 (ENSPPYG00000010172) #23	C5AR2 (ENSPPYG00000010171) #24	C5AR1 (ENSPPYG00000032120) #25	CCDC9 (ENSPPYG00000010170) #27	ENSPPYG00000010169	SAE1 (ENSPPYG00000010168) #29	ZC3H4 (ENSPPYG00000010167) #30	TMEM160 (ENSPPYG00000032917) #31	NPAS1 (ENSPPYG00000010165) #32	ARHGAP35 (ENSPPYG00000010164) #33	AP2S1 (ENSPPYG00000010163) #35	SLC1A5 (ENSPPYG00000010161) #36	FKRP (ENSPPYG00000010160) #37	STRN4 (ENSPPYG00000010159)	PRKD2 (ENSPPYG00000010158)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000164595.b	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a #15	ENSGT00390000017267.i.a.a #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.i.b #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000163003 #12	ENSGT00940000154432	ENSGT00940000164595.b	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a #15	ENSGT00390000017267.i.a.a #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.i.b #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Pan	ANCESTRAL SPECIES	9	ENSGT00940000154432.f	ENSGT00940000164595.b	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a #15	ENSGT00390000017267.i.a.a #16	ENSGT00390000017267.i.a.b #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007.i.b #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Chimpanzee	MODERN SPECIES	10	ELSPBP1 (ENSPTRG00000011221) #11	BSPH1 (ENSPTRG00000011220) #12	SULT2A1 (ENSPTRG00000011219)	ENSPTRG00000052710	CRX (ENSPTRG00000011217) #14	TPRX1 (ENSPTRG00000028949)	ENSPTRG00000049635	SELENOW (ENSPTRG00000011216) #15	NOP53 (ENSPTRG00000011215) #16	EHD2 (ENSPTRG00000011214) #17	ENSPTRG00000011213	ZNF541 (ENSPTRG00000011212) #18	NAPA (ENSPTRG00000011211) #19	KPTN (ENSPTRG00000011210) #20	SLC8A2 (ENSPTRG00000011209) #21	MEIS3 (ENSPTRG00000011208) #22	DHX34 (ENSPTRG00000011207) #23	C5AR2 (ENSPTRG00000041525) #24	C5AR1 (ENSPTRG00000028958) #25	INAFM1 (ENSPTRG00000040861) #26	CCDC9 (ENSPTRG00000011204) #27	BBC3 (ENSPTRG00000011203)	SAE1 (ENSPTRG00000011202) #29	ZC3H4 (ENSPTRG00000011201) #30	TMEM160 (ENSPTRG00000011200) #31	NPAS1 (ENSPTRG00000011199) #32	ARHGAP35 (ENSPTRG00000011198) #33	AP2S1 (ENSPTRG00000011197) #35	SLC1A5 (ENSPTRG00000011194) #36	FKRP (ENSPTRG00000050198) #37	STRN4 (ENSPTRG00000011192)
Bonobo	MODERN SPECIES	10	PLA2G4C (ENSPPAG00000043463)	CABP5 (ENSPPAG00000039821) #10	ELSPBP1 (ENSPPAG00000020685) #11	BSPH1 (ENSPPAG00000043793) #12	SULT2A1 (ENSPPAG00000041390)	ENSPPAG00000037685	SELENOW (ENSPPAG00000036760) #15	ENSPPAG00000032995 #16	EHD2 (ENSPPAG00000039669) #17	BICRA (ENSPPAG00000003935)	ZNF541 (ENSPPAG00000039092) #18	NAPA (ENSPPAG00000033696) #19	KPTN (ENSPPAG00000008738) #20	SLC8A2 (ENSPPAG00000030149) #21	ENSPPAG00000024281	ENSPPAG00000016062 #22	DHX34 (ENSPPAG00000029582) #23	C5AR2 (ENSPPAG00000023287) #24	C5AR1 (ENSPPAG00000027323) #25	CCDC9 (ENSPPAG00000036850) #27	ENSPPAG00000039786 #28	SAE1 (ENSPPAG00000032113) #29	ZC3H4 (ENSPPAG00000037610) #30	TMEM160 (ENSPPAG00000040416) #31	NPAS1 (ENSPPAG00000040385) #32	ARHGAP35 (ENSPPAG00000035858) #33	ENSPPAG00000021619 #35	SLC1A5 (ENSPPAG00000040539) #36	FKRP (ENSPPAG00000037227) #37	STRN4 (ENSPPAG00000035898)	PRKD2 (ENSPPAG00000037267)
Human	MODERN SPECIES	10	CABP5 (ENSG00000105507) #10	ELSPBP1 (ENSG00000169393) #11	BSPH1 (ENSG00000188334) #12	SULT2A1 (ENSG00000105398)	TPRX2 (ENSG00000259009)	CRX (ENSG00000105392) #14	TPRX1 (ENSG00000178928)	SELENOW (ENSG00000178980) #15	NOP53 (ENSG00000105373) #16	EHD2 (ENSG00000024422) #17	BICRA (ENSG00000063169)	ZNF541 (ENSG00000118156) #18	NAPA (ENSG00000105402) #19	KPTN (ENSG00000118162) #20	SLC8A2 (ENSG00000118160) #21	MEIS3 (ENSG00000105419) #22	DHX34 (ENSG00000134815) #23	C5AR2 (ENSG00000134830) #24	C5AR1 (ENSG00000197405) #25	INAFM1 (ENSG00000257704) #26	CCDC9 (ENSG00000105321) #27	BBC3 (ENSG00000105327) #28	SAE1 (ENSG00000142230) #29	ZC3H4 (ENSG00000130749) #30	TMEM160 (ENSG00000130748) #31	NPAS1 (ENSG00000130751) #32	ARHGAP35 (ENSG00000160007) #33	AP2S1 (ENSG00000042753) #35	SLC1A5 (ENSG00000105281) #36	FKRP (ENSG00000181027) #37	STRN4 (ENSG00000090372)
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	18	RNF112 (ENSGGOG00000001030)	SLC47A1 (ENSGGOG00000016236)	ALDH3A2 (ENSGGOG00000007664)	SLC47A2 (ENSGGOG00000007670)	ALDH3A1 (ENSGGOG00000007682)	ENSGGOG00000042248	ULK2 (ENSGGOG00000007689)	AKAP10 (ENSGGOG00000034845)	ENSGGOG00000040814	ENSGGOG00000024511	SPECC1 (ENSGGOG00000001874)	ENSGGOG00000042226	ENSGGOG00000041219	ENSGGOG00000021951	ENSGGOG00000004314	ENSGGOG00000027850 #22	ENSGGOG00000038364	ENSGGOG00000016448	ENSGGOG00000009640	USP22 (ENSGGOG00000008595)	DHRS7B (ENSGGOG00000008471)	TMEM11 (ENSGGOG00000008476)	NATD1 (ENSGGOG00000016265)	MAP2K3 (ENSGGOG00000000670)	KCNJ18 (ENSGGOG00000040998)	ENSGGOG00000041142	WSB1 (ENSGGOG00000015361)	ENSGGOG00000040351	KSR1 (ENSGGOG00000000817)	LGALS9 (ENSGGOG00000022973)	NOS2 (ENSGGOG00000000820)
Gorilla	MODERN SPECIES	10	ELSPBP1 (ENSGGOG00000001477) #11	BSPH1 (ENSGGOG00000000055) #12	SULT2A1 (ENSGGOG00000012156)	TPRX2 (ENSGGOG00000040885)	CRX (ENSGGOG00000016158) #14	TPRX1 (ENSGGOG00000009265)	ENSGGOG00000040974	SELENOW (ENSGGOG00000012269) #15	NOP53 (ENSGGOG00000005462) #16	EHD2 (ENSGGOG00000002346) #17	BICRA (ENSGGOG00000012809)	ZNF541 (ENSGGOG00000000277) #18	NAPA (ENSGGOG00000000703) #19	KPTN (ENSGGOG00000000702) #20	SLC8A2 (ENSGGOG00000011557) #21	ENSGGOG00000001093 #22	DHX34 (ENSGGOG00000010037) #23	C5AR2 (ENSGGOG00000016452) #24	C5AR1 (ENSGGOG00000008622) #25	INAFM1 (ENSGGOG00000027893) #26	CCDC9 (ENSGGOG00000015097) #27	ENSGGOG00000040116	SAE1 (ENSGGOG00000013078) #29	ENSGGOG00000039096	ZC3H4 (ENSGGOG00000013071) #30	TMEM160 (ENSGGOG00000013410) #31	NPAS1 (ENSGGOG00000013398) #32	ARHGAP35 (ENSGGOG00000027302) #33	ENSGGOG00000011254 #35	SLC1A5 (ENSGGOG00000008792) #36	FKRP (ENSGGOG00000043279) #37
Strepsirrhini	ANCESTRAL SPECIES	16	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Bushbaby	MODERN SPECIES	267					ENSOGAG00000030968	ENSOGAG00000025340	CRX (ENSOGAG00000034554) #14	ENSOGAG00000028694	NOP53 (ENSOGAG00000024300) #16	EHD2 (ENSOGAG00000033142) #17	BICRA (ENSOGAG00000002399)	ZNF541 (ENSOGAG00000002397) #18	NAPA (ENSOGAG00000032621) #19	KPTN (ENSOGAG00000009999) #20	SLC8A2 (ENSOGAG00000029237) #21	MEIS3 (ENSOGAG00000002063) #22	DHX34 (ENSOGAG00000002061) #23	C5AR2 (ENSOGAG00000033946) #24	C5AR1 (ENSOGAG00000000133) #25	INAFM1 (ENSOGAG00000029523) #26	CCDC9 (ENSOGAG00000015701) #27	BBC3 (ENSOGAG00000034738) #28	SAE1 (ENSOGAG00000007650) #29	ZC3H4 (ENSOGAG00000031123) #30	TMEM160 (ENSOGAG00000033520) #31	NPAS1 (ENSOGAG00000012829) #32	ARHGAP35 (ENSOGAG00000033334) #33	AP2S1 (ENSOGAG00000033467) #35	SLC1A5 (ENSOGAG00000033704) #36	FKRP (ENSOGAG00000026248) #37	STRN4 (ENSOGAG00000015276)
Lemuriformes	ANCESTRAL SPECIES	15	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Mouse lemur	MODERN SPECIES	14	LIG1 (ENSMICG00000007160) #9	CABP5 (ENSMICG00000007151) #10	ELSPBP1 (ENSMICG00000007142) #11	ENSMICG00000041886 #13	SULT2A1 (ENSMICG00000037551)	ENSMICG00000035603	CRX (ENSMICG00000042307) #14	SELENOW (ENSMICG00000012606) #15	NOP53 (ENSMICG00000005580) #16	EHD2 (ENSMICG00000005571) #17	BICRA (ENSMICG00000028080)	ZNF541 (ENSMICG00000017737) #18	NAPA (ENSMICG00000011599) #19	KPTN (ENSMICG00000026946) #20	SLC8A2 (ENSMICG00000030836) #21	MEIS3 (ENSMICG00000031566) #22	DHX34 (ENSMICG00000011585) #23	C5AR1 (ENSMICG00000045174) #25	CCDC9 (ENSMICG00000008823) #27	ENSMICG00000008820	SAE1 (ENSMICG00000008807) #29	ZC3H4 (ENSMICG00000008786) #30	TMEM160 (ENSMICG00000035539) #31	NPAS1 (ENSMICG00000006346) #32	ARHGAP35 (ENSMICG00000037921) #33	AP2S1 (ENSMICG00000038528) #35	SLC1A5 (ENSMICG00000000030) #36	FKRP (ENSMICG00000043598) #37	STRN4 (ENSMICG00000015400)	PRKD2 (ENSMICG00000015377)	DACT3 (ENSMICG00000042964)
Lemuriformes_a	ANCESTRAL SPECIES	5	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069 #15	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a
Coquerels sifaka	MODERN SPECIES	568	SMARCA1 (ENSPCOG00000020722)	ZSWIM9 (ENSPCOG00000016877) #8	LIG1 (ENSPCOG00000027835) #9	CABP5 (ENSPCOG00000028027) #10	ENSPCOG00000019131 #11	SULT2A1 (ENSPCOG00000014554)	CRX (ENSPCOG00000021790) #14	SELENOW (ENSPCOG00000013997) #15	NOP53 (ENSPCOG00000016124) #16	EHD2 (ENSPCOG00000010027) #17	BICRA (ENSPCOG00000017166)	ZNF541 (ENSPCOG00000006138) #18	NAPA (ENSPCOG00000014946) #19	KPTN (ENSPCOG00000022678) #20	SLC8A2 (ENSPCOG00000023795) #21	MEIS3 (ENSPCOG00000024690) #22	DHX34 (ENSPCOG00000027801) #23	CCDC9 (ENSPCOG00000020816) #27	ENSPCOG00000019970	SAE1 (ENSPCOG00000018619) #29	ZC3H4 (ENSPCOG00000017169) #30	TMEM160 (ENSPCOG00000028665) #31	NPAS1 (ENSPCOG00000017882) #32	ARHGAP35 (ENSPCOG00000015788) #33	AP2S1 (ENSPCOG00000022192) #35	SLC1A5 (ENSPCOG00000024625) #36	FKRP (ENSPCOG00000008360) #37	STRN4 (ENSPCOG00000028165)	PRKD2 (ENSPCOG00000018544)	DACT3 (ENSPCOG00000024045)	GNG8 (ENSPCOG00000014293)
Greater bamboo lemur	MODERN SPECIES	67	ZSWIM9 (ENSPSMG00000024028) #8	LIG1 (ENSPSMG00000024001) #9	CABP5 (ENSPSMG00000023902) #10	ELSPBP1 (ENSPSMG00000023896) #11	BSPH1 (ENSPSMG00000023887) #12	ENSPSMG00000023884 #13	SULT2A1 (ENSPSMG00000023880)	CRX (ENSPSMG00000023876) #14	SELENOW (ENSPSMG00000023871) #15	NOP53 (ENSPSMG00000023860) #16	EHD2 (ENSPSMG00000023831) #17	ZNF541 (ENSPSMG00000023826) #18	NAPA (ENSPSMG00000023803) #19	KPTN (ENSPSMG00000023747) #20	SLC8A2 (ENSPSMG00000023733) #21	MEIS3 (ENSPSMG00000023720) #22	DHX34 (ENSPSMG00000023684) #23	C5AR2 (ENSPSMG00000023674) #24	C5AR1 (ENSPSMG00000023671) #25	INAFM1 (ENSPSMG00000023664) #26	CCDC9 (ENSPSMG00000023662) #27	BBC3 (ENSPSMG00000023660) #28	SAE1 (ENSPSMG00000023654) #29	ENSPSMG00000023638	ZC3H4 (ENSPSMG00000023633) #30	TMEM160 (ENSPSMG00000023618) #31	NPAS1 (ENSPSMG00000023615) #32
Atlantogenata	ANCESTRAL SPECIES	48	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000154432	ENSGT00940000163048	ENSGT00940000166546	ENSGT00940000161634 #14	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Xenarthra	ANCESTRAL SPECIES	251				ENSGT00940000163048	ENSGT00940000154432	ENSGT00940000163805 #13	ENSGT00940000166546	ENSGT00940000161634 #14	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #25
Armadillo	MODERN SPECIES	3535										ENSDNOG00000043390 #17	BICRA (ENSDNOG00000044109)	ZNF541 (ENSDNOG00000049267) #18	NAPA (ENSDNOG00000032517) #19	KPTN (ENSDNOG00000043885) #20	SLC8A2 (ENSDNOG00000024107) #21	MEIS3 (ENSDNOG00000005541) #22	DHX34 (ENSDNOG00000031738) #23	C5AR1 (ENSDNOG00000038763) #25	ENSDNOG00000038380	ENSDNOG00000036704
Afrotheria	ANCESTRAL SPECIES	22	ENSGT00530000063801.b	ENSGT00960000186612.A.b	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Tenrec	MODERN SPECIES	13430																MEIS3 (ENSETEG00000009874) #22
Afrotheria_a	ANCESTRAL SPECIES	21	ENSGT00530000063801.b	ENSGT00960000186612.A.b	ENSGT00390000011694 #8	ENSGT00940000157783 #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003 #12	ENSGT00940000163805 #13	ENSGT00940000161634 #14	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Hyrax	MODERN SPECIES	608																MEIS3 (ENSPCAG00000016512) #22
Elephant	MODERN SPECIES	375	ENSLAFG00000003556 #7	ENSLAFG00000031844	ENSLAFG00000022646 #8	LIG1 (ENSLAFG00000008673) #9	CABP5 (ENSLAFG00000005327) #10	ELSPBP1 (ENSLAFG00000017403) #11	BSPH1 (ENSLAFG00000020529) #12	ENSLAFG00000028834 #13	CRX (ENSLAFG00000007254) #14	EHD2 (ENSLAFG00000029346) #17	ENSLAFG00000023304	ENSLAFG00000015647	ZNF541 (ENSLAFG00000009287) #18	NAPA (ENSLAFG00000009284) #19	KPTN (ENSLAFG00000009281) #20	MEIS3 (ENSLAFG00000031905) #22	DHX34 (ENSLAFG00000003186) #23	C5AR1 (ENSLAFG00000023333) #25	CCDC9 (ENSLAFG00000026191) #27	BBC3 (ENSLAFG00000008852) #28	SAE1 (ENSLAFG00000001593) #29	ZC3H4 (ENSLAFG00000001586) #30	TMEM160 (ENSLAFG00000014543) #31	ARHGAP35 (ENSLAFG00000018311) #33	ENSLAFG00000026512 #35	SLC1A5 (ENSLAFG00000000671) #36	FKRP (ENSLAFG00000025662) #37	STRN4 (ENSLAFG00000004220)	PRKD2 (ENSLAFG00000021718)	DACT3 (ENSLAFG00000000449)	PTGIR (ENSLAFG00000021881)
Marsupialia	ANCESTRAL SPECIES	20	ENSGT00940000161428	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00940000161428	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Diprotodontia	ANCESTRAL SPECIES	58	ENSGT00940000161428	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
Diprotodontia_a	ANCESTRAL SPECIES	56	ENSGT00940000161428	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT00970000193421.A #35	ENSGT00940000159485 #36	ENSGT00390000017583 #37	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b
koala	MODERN SPECIES	345	TGFB1 (ENSPCIG00000016755)	B9D2 (ENSPCIG00000016752)	ENSPCIG00000031405	EXOSC5 (ENSPCIG00000016745)	BCKDHA (ENSPCIG00000016741)	B3GNT8 (ENSPCIG00000016739)	PRSS16 (ENSPCIG00000016736)	ENSPCIG00000016733	NOP53 (ENSPCIG00000016718) #16	EHD2 (ENSPCIG00000016714) #17	BICRA (ENSPCIG00000016713)	ZNF541 (ENSPCIG00000007543) #18	NAPA (ENSPCIG00000016508) #19	KPTN (ENSPCIG00000016494) #20	SLC8A2 (ENSPCIG00000016491) #21	MEIS3 (ENSPCIG00000016488) #22	DHX34 (ENSPCIG00000000889) #23	ENSPCIG00000000869 #24	C5AR1 (ENSPCIG00000000822) #25	CCDC9 (ENSPCIG00000028131) #27	ENSPCIG00000028133 #28	SAE1 (ENSPCIG00000028135) #29	ZC3H4 (ENSPCIG00000028138) #30	TMEM160 (ENSPCIG00000028139) #31	NPAS1 (ENSPCIG00000032390) #32	ARHGAP35 (ENSPCIG00000025775) #33	ENSPCIG00000025776 #35	SLC1A5 (ENSPCIG00000025777) #36	FKRP (ENSPCIG00000025778) #37	STRN4 (ENSPCIG00000025779)	PRKD2 (ENSPCIG00000025780)
Common wonbat	MODERN SPECIES	1158	B9D2 (ENSVURG00010003328)	ENSVURG00010003314	EXOSC5 (ENSVURG00010003301)	BCKDHA (ENSVURG00010003253)	B3GNT8 (ENSVURG00010003243)	ENSVURG00010003220	PRSS16 (ENSVURG00010003162)	CRX (ENSVURG00010003112) #14	NOP53 (ENSVURG00010003088) #16	EHD2 (ENSVURG00010003073) #17	BICRA (ENSVURG00010002965)	ZNF541 (ENSVURG00010002837) #18	NAPA (ENSVURG00010002799) #19	ENSVURG00010002786 #20	SLC8A2 (ENSVURG00010002773) #21	MEIS3 (ENSVURG00010022726) #22	DHX34 (ENSVURG00010022703) #23	C5AR2 (ENSVURG00010022700) #24	ENSVURG00010022698 #25	CCDC9 (ENSVURG00010022694) #27	ENSVURG00010022689 #28	ENSVURG00010022683 #29	ENSVURG00010022671 #30	ENSVURG00010022668 #31	ENSVURG00010022660 #32	ENSVURG00010022649 #33	ENSVURG00010022632 #35	ENSVURG00010022289 #36	ENSVURG00010022272 #37	ENSVURG00010022263	ENSVURG00010021751
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000025993	ENSSHAG00000025734	ENSSHAG00000005012	ENSSHAG00000005291	HNRNPUL1 (ENSSHAG00000005904)	B9D2 (ENSSHAG00000026978)	ENSSHAG00000022177	ENSSHAG00000025782	ENSSHAG00000003069	ENSSHAG00000002757 #14	NOP53 (ENSSHAG00000023645) #16	ENSSHAG00000026122 #17	ZNF541 (ENSSHAG00000003056) #18	NAPA (ENSSHAG00000022077) #19	ENSSHAG00000024846	MEIS3 (ENSSHAG00000021311) #22	ENSSHAG00000030420 #15	ENSSHAG00000029825	C5AR2 (ENSSHAG00000027588) #24	ENSSHAG00000001420 #25	SAE1 (ENSSHAG00000002813) #29	ZC3H4 (ENSSHAG00000028166) #30	NPAS1 (ENSSHAG00000024261) #32	ARHGAP35 (ENSSHAG00000006639) #33	AP2S1 (ENSSHAG00000026500) #35	SLC1A5 (ENSSHAG00000026042) #36	PRKD2 (ENSSHAG00000021404)	ENSSHAG00000025928	ENSSHAG00000020505	DACT3 (ENSSHAG00000031611)	ENSSHAG00000030771
Platypus	MODERN SPECIES	16	HNRNPUL1 (ENSOANG00000011111)	CCDC97 (ENSOANG00000032082)	TGFB1 (ENSOANG00000043657)	B9D2 (ENSOANG00000046421)	EXOSC5 (ENSOANG00000044960)	BCKDHA (ENSOANG00000008790)	B3GNT8 (ENSOANG00000041802)	ENSOANG00000048851	ENSOANG00000036512	ENSOANG00000032145	ENSOANG00000047615	NOP53 (ENSOANG00000050511) #16	NAPA (ENSOANG00000036278) #19	KPTN (ENSOANG00000021752) #20	SLC8A2 (ENSOANG00000040184) #21	MEIS3 (ENSOANG00000048143) #22	ENSOANG00000003497	PSMD8 (ENSOANG00000042903)	ENSOANG00000041545	ENSOANG00000037098	RASGRP4 (ENSOANG00000037488)	RYR1 (ENSOANG00000047642)	MAP4K1 (ENSOANG00000000504)	EIF3K (ENSOANG00000012188)	ACTN4 (ENSOANG00000036034)	CAPN12 (ENSOANG00000042811)	ENSOANG00000000347	ENSOANG00000003642	ENSOANG00000046197	ENSOANG00000041325	ECH1 (ENSOANG00000048825)
Sauria	ANCESTRAL SPECIES	34	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT01100000263504.a.b.a.b.a.b	ENSGT00940000171204	ENSGT01100000263504.a.b.a.a	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000161901	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00390000014139	ENSGT00390000014682	ENSGT00940000170834	ENSGT00940000161445	ENSGT00440000037341.b.b	ENSGT00940000159883	ENSGT00940000155288.b	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000159343	ENSGT00940000160378	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000166514	ENSGT00390000018436.b
Lepidosauria	ANCESTRAL SPECIES	344																ENSGT00940000161057 #22	ENSGT00990000206928
tuatara	MODERN SPECIES	252					ENSSPUG00000003825	ENSSPUG00000003837	ACTN4 (ENSSPUG00000003851)	ENSSPUG00000003867	ENSSPUG00000003876	ENSSPUG00000003888	ENSSPUG00000003895	ENSSPUG00000003904	RYR1 (ENSSPUG00000003931)	RASGRP4 (ENSSPUG00000004080)	PSMD8 (ENSSPUG00000004168)	ENSSPUG00000004185 #22	ENSSPUG00000004198	SLC8A2 (ENSSPUG00000004209) #21	KPTN (ENSSPUG00000004236) #20	NAPA (ENSSPUG00000004295) #19	ENSSPUG00000004304	ZNF541 (ENSSPUG00000004315) #18	BICRA (ENSSPUG00000004347)	EHD2 (ENSSPUG00000004401) #17	NOP53 (ENSSPUG00000004420) #16	ENSSPUG00000004450	SELENOW (ENSSPUG00000004460) #15	ENSSPUG00000004466	ENSSPUG00000004471
Episquamata	ANCESTRAL SPECIES	7	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000159610	ENSGT00940000160378	ENSGT00940000159343	ENSGT00390000009409	ENSGT00940000160308	ENSGT00940000155288.b	ENSGT00940000159883	ENSGT00440000037341.b.b	ENSGT00940000161445	ENSGT00940000170834	ENSGT00390000014682	ENSGT00390000014139	ENSGT00940000161057 #22	ENSGT00940000158344.b #21	ENSGT00390000002548 #20	ENSGT00390000005826.a.a #19	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330 #18	ENSGT00940000159112.b	ENSGT00940000161901	ENSGT00940000159256 #17	ENSGT00390000017267 #16	ENSGT01090000260005.a.b.a.b.b	ENSGT00940000161069 #15	ENSGT01100000263504.a.b.b.a.b	ENSGT01100000263504.a.b.a.b.a.b	ENSGT00940000161634 #14	ENSGT00940000160281
Laterata	ANCESTRAL SPECIES	17	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000159610	ENSGT00940000160378	ENSGT00940000159343	ENSGT00390000009409	ENSGT00940000160308	ENSGT00940000155288.b	ENSGT00940000159883	ENSGT00440000037341.b.b	ENSGT00940000161445	ENSGT00940000170834	ENSGT00390000014682	ENSGT00390000014139	ENSGT00940000161057 #22	ENSGT00940000158344.b #21	ENSGT00390000002548 #20	ENSGT00390000005826.a.a #19	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330 #18	ENSGT00940000159112.b	ENSGT00940000161901	ENSGT00940000159256 #17	ENSGT00390000017267 #16	ENSGT01090000260005.a.b.a.b.b	ENSGT00940000161069 #15	ENSGT00940000161634 #14	ENSGT00940000160281	ENSGT00940000160500	ENSGT00940000161895
Argentine black and white tegu	MODERN SPECIES	59	HNRNPL (ENSSMRG00000015085)	ECH1 (ENSSMRG00000015084)	LGALS4 (ENSSMRG00000015083)	ENSSMRG00000015082	ACTN4 (ENSSMRG00000015081)	EIF3K (ENSSMRG00000015080)	ENSSMRG00000015079	RYR1 (ENSSMRG00000007722)	ENSSMRG00000007638	RASGRP4 (ENSSMRG00000007635)	ENSSMRG00000007629	SPRED3 (ENSSMRG00000007622)	ENSSMRG00000007620	PSMD8 (ENSSMRG00000007610)	ENSSMRG00000007593	ENSSMRG00000007233 #22	SLC8A2 (ENSSMRG00000007223) #21	KPTN (ENSSMRG00000007219) #20	NAPA (ENSSMRG00000007212) #19	ENSSMRG00000007202	ZNF541 (ENSSMRG00000007167) #18	BICRA (ENSSMRG00000007162)	ENSSMRG00000007159	EHD2 (ENSSMRG00000007155) #17	NOP53 (ENSSMRG00000007150) #16	ENSSMRG00000007149	SELENOW (ENSSMRG00000007145) #15	ENSSMRG00000007141	ENSSMRG00000007137	ENSSMRG00000007133	DMAC2 (ENSSMRG00000007131)
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000012190	ENSPMRG00000012186	HNRNPL (ENSPMRG00000012182)	ECH1 (ENSPMRG00000012178)	LGALS4 (ENSPMRG00000012171)	ACTN4 (ENSPMRG00000012127)	EIF3K (ENSPMRG00000012120)	MAP4K1 (ENSPMRG00000012108)	ENSPMRG00000012102	RYR1 (ENSPMRG00000010440)	RASGRP4 (ENSPMRG00000010019)	ENSPMRG00000010006	SPRED3 (ENSPMRG00000009999)	PSMD8 (ENSPMRG00000009992)	ENSPMRG00000009984	ENSPMRG00000009975 #22	SLC8A2 (ENSPMRG00000009969) #21	KPTN (ENSPMRG00000009957) #20	NAPA (ENSPMRG00000009946) #19	ENSPMRG00000009933	BICRA (ENSPMRG00000009906)	ENSPMRG00000009894	ENSPMRG00000009885	ENSPMRG00000009877	ENSPMRG00000009869	ENSPMRG00000009823	AKT2 (ENSPMRG00000009772)	ENSPMRG00000009744	TTC9B (ENSPMRG00000009737)	MAP3K10 (ENSPMRG00000009719)	ENSPMRG00000009706
Toxicofera	ANCESTRAL SPECIES	22	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000159610	ENSGT00940000160378	ENSGT00940000159343	ENSGT00390000009409	ENSGT00940000160308	ENSGT00940000155288.b	ENSGT00940000159883	ENSGT00440000037341.b.b	ENSGT00940000161445	ENSGT00940000170834	ENSGT00390000014682	ENSGT00390000014139	ENSGT00940000161057 #22	ENSGT00940000158344.b #21	ENSGT00390000002548 #20	ENSGT00390000005826.a.a #19	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330 #18	ENSGT00940000159112.b	ENSGT00940000159256 #17	ENSGT00390000017267 #16	ENSGT00940000161069 #15	ENSGT01090000260005.a.b.a.b.b	ENSGT01100000263504.a.b.a.b.a.b	ENSGT00940000161634 #14	ENSGT00940000160281	ENSGT00940000160500	ENSGT00940000161895
Elapidae	ANCESTRAL SPECIES	9	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000159610	ENSGT00940000160378.s.b	ENSGT00940000160378.s.a.a.b	ENSGT00940000159343	ENSGT00390000009409	ENSGT00940000160308.eb	ENSGT00940000155288.b	ENSGT00940000159883	ENSGT00440000037341.b.b	ENSGT00940000161445.cb	ENSGT00940000170834	ENSGT00940000161445.bb	ENSGT00390000014682.a	ENSGT00390000014139	ENSGT00940000161057 #22	ENSGT00940000158344.b #21	ENSGT00390000002548.d #20	ENSGT00390000005826.a.a #19	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330 #18	ENSGT00940000159112.b	ENSGT00940000159256 #17	ENSGT00390000017267 #16	ENSGT00940000161069 #15	ENSGT01090000260005.a.b.a.b.b	ENSGT00940000162247.a	ENSGT01100000263504.a.b.a.b.a.b	ENSGT00940000161634 #14	ENSGT00940000160281	ENSGT00940000160500
Indian cobra	MODERN SPECIES	11	ENSNNAG00000015667	ENSNNAG00000015648	ENSNNAG00000015639	ENSNNAG00000015628	ENSNNAG00000015604	ACTN4 (ENSNNAG00000013992)	ENSNNAG00000013900	EIF3K (ENSNNAG00000013884)	ENSNNAG00000013850	RASGRP4 (ENSNNAG00000004377)	ENSNNAG00000004328	ENSNNAG00000004317	ENSNNAG00000004295	PSMD8 (ENSNNAG00000004223)	ENSNNAG00000003932	ENSNNAG00000003835 #22	KPTN (ENSNNAG00000003787) #20	ENSNNAG00000015768 #19	ENSNNAG00000015751	ZNF541 (ENSNNAG00000015741) #18	BICRA (ENSNNAG00000015716)	EHD2 (ENSNNAG00000015707) #17	NOP53 (ENSNNAG00000015645) #16	GJD2 (ENSNNAG00000015624)	ENSNNAG00000015613	ENSNNAG00000015606	ENSNNAG00000015597 #14	EXOSC5 (ENSNNAG00000015576)	TMEM91 (ENSNNAG00000015567)	ENSNNAG00000015558	CCDC97 (ENSNNAG00000015532)
Elapidae_a	ANCESTRAL SPECIES	33	ENSGT00940000159610	ENSGT00940000160378.s.b	ENSGT00940000160378.s.a.a.b.b	ENSGT01050000246816	ENSGT00940000160378.s.a.a.b.a	ENSGT00940000159343	ENSGT00390000009409	ENSGT00940000160308.eb	ENSGT00940000155288.b	ENSGT00940000159883	ENSGT00440000037341.b.b	ENSGT00940000161445.cb	ENSGT00940000161445.bb	ENSGT00390000014682.a	ENSGT00390000014139	ENSGT00940000161057 #22	ENSGT00940000158344.b #21	ENSGT00390000002548.d #20	ENSGT00390000002548.c #20	ENSGT00390000005826.a.a #19	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330 #18	ENSGT00940000159112.b	ENSGT00940000159256 #17	ENSGT00390000017267 #16	ENSGT00940000161069 #15	ENSGT01100000263504.a.b.a.b.a.b	ENSGT00940000161634 #14	ENSGT00940000160281	ENSGT00940000160500	ENSGT00940000161895
Acanthophiinae	ANCESTRAL SPECIES	32	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000159610	ENSGT00940000160378.s.b	ENSGT00940000160378.s.a.a.b.b	ENSGT01050000246816	ENSGT00940000160378.s.a.a.b.a	ENSGT00940000159343	ENSGT00390000009409	ENSGT00940000160308.eb	ENSGT00940000155288.b	ENSGT00940000159883	ENSGT00940000161445.bb	ENSGT00390000014682.a	ENSGT00390000014139	ENSGT00940000161057 #22	ENSGT00940000158344.b #21	ENSGT00390000002548.c #20	ENSGT00390000005826.a.a #19	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330 #18	ENSGT00940000159112.b	ENSGT00940000159256 #17	ENSGT00390000017267 #16	ENSGT00940000161069 #15	ENSGT01100000263504.a.b.a.b.a.b	ENSGT00940000161634 #14	ENSGT00940000160281	ENSGT00940000160500	ENSGT00940000161895	ENSGT00530000063174.b
Eastern brown snake	MODERN SPECIES	77	ENSPTXG00000017255	HNRNPL (ENSPTXG00000012356)	ECH1 (ENSPTXG00000012357)	ENSPTXG00000012361	ENSPTXG00000012363	ACTN4 (ENSPTXG00000012365)	EIF3K (ENSPTXG00000012439)	ENSPTXG00000012442	RYR1 (ENSPTXG00000012560)	ENSPTXG00000019017	RASGRP4 (ENSPTXG00000019018)	SPRED3 (ENSPTXG00000019020)	PSMD8 (ENSPTXG00000019025)	ENSPTXG00000019026	ENSPTXG00000019027	ENSPTXG00000019028 #22	SLC8A2 (ENSPTXG00000019029) #21	ENSPTXG00000019030 #20	ENSPTXG00000019031 #20	NAPA (ENSPTXG00000019032) #19	ENSPTXG00000019033	ZNF541 (ENSPTXG00000019034) #18	BICRA (ENSPTXG00000019035)	EHD2 (ENSPTXG00000019036) #17	NOP53 (ENSPTXG00000019037) #16	ENSPTXG00000019039	ENSPTXG00000019040	ENSPTXG00000019041	CRX (ENSPTXG00000019042) #14	ENSPTXG00000019043	DMAC2 (ENSPTXG00000019044)
Archelosauria	ANCESTRAL SPECIES	33	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT01100000263504.a.b.a.b.a.b	ENSGT00940000171204	ENSGT01100000263504.a.b.a.a	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000161901	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00390000014139	ENSGT00390000014682	ENSGT00940000170834	ENSGT00940000161445	ENSGT00440000037341.b.b	ENSGT00940000159883	ENSGT00940000155288.b	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000159343	ENSGT00940000160378	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000166514	ENSGT00390000018436.b
Cryptodira	ANCESTRAL SPECIES	35	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT01100000263504.a.b.a.b.a.b	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000161069 #15	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000161901	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00390000014139	ENSGT00390000014682	ENSGT00940000170834	ENSGT00940000161445	ENSGT00440000037341.b.b	ENSGT00940000159883	ENSGT00940000155288.b	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000159343	ENSGT00940000160378	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000166514	ENSGT00390000018436.b
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000161057.e #22
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000161057.e #22
Three-toed box turtle	MODERN SPECIES	1767																ENSTMTG00000008520 #22
Testudinoidea	ANCESTRAL SPECIES	30	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT01100000263504.a.b.a.b.a.b	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000161901	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057.f #22	ENSGT00390000014139	ENSGT00390000014682	ENSGT00940000170834	ENSGT00940000161445	ENSGT00440000037341.b.b.b	ENSGT00940000159883	ENSGT00940000155288.b	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000159343	ENSGT00940000160378.q.a	ENSGT00940000160378.r	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000166514
Emydidae	ANCESTRAL SPECIES	45	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT01100000263504.a.b.a.b.a.b	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000161901	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057.f #22	ENSGT00390000014139	ENSGT00390000014682	ENSGT00940000170834	ENSGT00940000161445	ENSGT00440000037341.b.b.b	ENSGT00940000159883	ENSGT00940000159343	ENSGT00940000160378.r	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.d	ENSGT00940000166514	ENSGT00390000018436.b	ENSGT00940000162381	ENSGT00940000157514.a	ENSGT00940000161595
Three-toed box turtle	MODERN SPECIES	252	BCKDHA (ENSTMTG00000003495)	B3GNT8 (ENSTMTG00000003523)	DMAC2 (ENSTMTG00000003536)	ENSTMTG00000003567	ENSTMTG00000003605	ENSTMTG00000003643	SELENOW (ENSTMTG00000003661) #15	EHD2 (ENSTMTG00000003679) #17	ENSTMTG00000003694	BICRA (ENSTMTG00000003713)	ZNF541 (ENSTMTG00000003768) #18	ENSTMTG00000003897	NAPA (ENSTMTG00000003917) #19	KPTN (ENSTMTG00000003997) #20	SLC8A2 (ENSTMTG00000004021) #21	ENSTMTG00000004088 #22	CATSPERG (ENSTMTG00000004257)	PSMD8 (ENSTMTG00000004454)	ENSTMTG00000004485	SPRED3 (ENSTMTG00000004543)	ENSTMTG00000004865	RASGRP4 (ENSTMTG00000004905)	ACTN4 (ENSTMTG00000005102)	ENSTMTG00000005159	ECH1 (ENSTMTG00000005387)	HNRNPL (ENSTMTG00000005412)	ENSTMTG00000005568	ENSTMTG00000005579	ENSTMTG00000005615	SIRT2 (ENSTMTG00000005655)	NFKBIB (ENSTMTG00000005722)
painted turtle	MODERN SPECIES	949	ENSCPBG00000009093	CRX (ENSCPBG00000009076) #14	ENSCPBG00000009066	ENSCPBG00000009062	ENSCPBG00000009057	NOP53 (ENSCPBG00000009047) #16	EHD2 (ENSCPBG00000009041) #17	ENSCPBG00000009033	ENSCPBG00000009030	BICRA (ENSCPBG00000009017)	ZNF541 (ENSCPBG00000009004) #18	ENSCPBG00000009000	NAPA (ENSCPBG00000008994) #19	KPTN (ENSCPBG00000008980) #20	SLC8A2 (ENSCPBG00000008974) #21	MEIS3 (ENSCPBG00000008795) #22	ENSCPBG00000008758	PSMD8 (ENSCPBG00000008752)	ENSCPBG00000008745	SPRED3 (ENSCPBG00000008735)	ENSCPBG00000008730	ENSCPBG00000008728	RASGRP4 (ENSCPBG00000008705)	ENSCPBG00000008694	ENSCPBG00000008686
Testudinidae	ANCESTRAL SPECIES	36	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000160281	ENSGT00940000161634 #14	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267 #16	ENSGT00940000159256 #17	ENSGT00940000161901	ENSGT00940000159112.b	ENSGT00940000160330 #18	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057.f #22	ENSGT00390000014139	ENSGT00390000014682	ENSGT00940000170834	ENSGT00940000161445	ENSGT00440000037341.b.b.a	ENSGT00440000037341.b.b.b	ENSGT00940000159883	ENSGT00940000155288.b	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000159343	ENSGT00940000160378.q.a	ENSGT00940000160378.r	ENSGT00940000159610	ENSGT01030000234642.a.b.b.d.b.d
Goode s thornscrub tortoise	MODERN SPECIES	134	DMAC2 (ENSGEVG00005014708)	PRSS16 (ENSGEVG00005014791)	ENSGEVG00005014823	ENSGEVG00005014898	ENSGEVG00005014920	GJD2 (ENSGEVG00005014943)	NOP53 (ENSGEVG00005014974) #16	EHD2 (ENSGEVG00005015006) #17	CAPN12 (ENSGEVG00005015065)	BICRA (ENSGEVG00005015175)	ZNF541 (ENSGEVG00005015226) #18	ENSGEVG00005015256	NAPA (ENSGEVG00005015284) #19	KPTN (ENSGEVG00005015356) #20	SLC8A2 (ENSGEVG00005015381) #21	MEIS3 (ENSGEVG00005015459) #22	CATSPERG (ENSGEVG00005015530)	ENSGEVG00005015651	PSMD8 (ENSGEVG00005015680)	ENSGEVG00005015710	SPRED3 (ENSGEVG00005015743)	ENSGEVG00005015784	RASGRP4 (ENSGEVG00005015869)	RYR1 (ENSGEVG00005016095)	ENSGEVG00005016594	ENSGEVG00005016631	EIF3K (ENSGEVG00005016641)	ACTN4 (ENSGEVG00005016669)	ENSGEVG00005016741	LGALS4 (ENSGEVG00005016776)	ECH1 (ENSGEVG00005016832)
Abingdon island giant tortoise	MODERN SPECIES	2284										ZNF541 (ENSCABG00000003889) #18	ENSCABG00000003883	NAPA (ENSCABG00000003686) #19	KPTN (ENSCABG00000003618) #20	ENSCABG00000003616 #21	ENSCABG00000003614 #21	MEIS3 (ENSCABG00000003612) #22	CATSPERG (ENSCABG00000003611)	PSMD8 (ENSCABG00000003609)	ENSCABG00000003607	SPRED3 (ENSCABG00000003400)	ENSCABG00000003384	RASGRP4 (ENSCABG00000003362)	ENSCABG00000003353	ENSCABG00000003344
Chinese turtle	MODERN SPECIES	545																ENSPSIG00000016694 #22	CATSPERG (ENSPSIG00000016879)	PSMD8 (ENSPSIG00000005164)	RASGRP4 (ENSPSIG00000005465)