Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00940000163805	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Primates	ANCESTRAL SPECIES	15	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000161069.e.b #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.b ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.i.b ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.b ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00710000107236 #26	ENSGT00550000075007.i.b ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.b ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.i.b.b ##27	ENSGT00550000075007.j #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.b ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00710000107236 #26	ENSGT00550000075007.i.b.a ##27	ENSGT00390000002767	ENSGT00550000075007.j #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32
Cercopithecinae_b	ANCESTRAL SPECIES	23	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.b ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00710000107236 #26	ENSGT00550000075007.i.b.a ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Cercopithecinae_d	ANCESTRAL SPECIES	9	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.b ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b #25	ENSGT00710000107236 #26	ENSGT00550000075007.i.b.a ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34	ENSGT00950000183181.B.b #35
Drill	MODERN SPECIES	254	ENSMLEG00000013732 #7	LIG1 (ENSMLEG00000024179) #8	PLA2G4C (ENSMLEG00000035538) #9	CABP5 (ENSMLEG00000029590) #10	ELSPBP1 (ENSMLEG00000044354) #11	SULT2A1 (ENSMLEG00000014855) #12	CRX (ENSMLEG00000010899) #13	SELENOW (ENSMLEG00000014481) #14	ENSMLEG00000032475 #15	EHD2 (ENSMLEG00000044265) #16	BICRA (ENSMLEG00000030433) #17	ZNF541 (ENSMLEG00000029328) #18	NAPA (ENSMLEG00000044028) #19	KPTN (ENSMLEG00000038643) #20	SLC8A2 (ENSMLEG00000041982) #21	MEIS3 (ENSMLEG00000034525) #22	DHX34 (ENSMLEG00000041860) #23	C5AR1 (ENSMLEG00000034392) #24	CCDC9 (ENSMLEG00000042193) #25	ENSMLEG00000038746 #26	ENSMLEG00000042254 #27	ZC3H4 (ENSMLEG00000007946) #28	ENSMLEG00000038871 #29	ARHGAP35 (ENSMLEG00000042586) #30	AP2S1 (ENSMLEG00000034145) #31	SLC1A5 (ENSMLEG00000039768) #32	STRN4 (ENSMLEG00000039813) #33	PRKD2 (ENSMLEG00000041161) #34	ENSMLEG00000042860 #35	GNG8 (ENSMLEG00000041963) #36	PTGIR (ENSMLEG00000039111) #37
Sooty mangabey	MODERN SPECIES	228	PLA2G4C (ENSCATG00000014087) #9	CABP5 (ENSCATG00000038717) #10	ELSPBP1 (ENSCATG00000039398) #11	BSPH1 (ENSCATG00000035095)	SULT2A1 (ENSCATG00000030367) #12	CRX (ENSCATG00000042146) #13	TPRX1 (ENSCATG00000035099)	SELENOW (ENSCATG00000023895) #14	ENSCATG00000032842 ##15	EHD2 (ENSCATG00000013287) #16	BICRA (ENSCATG00000043087) #17	ZNF541 (ENSCATG00000036460) #18	NAPA (ENSCATG00000039365) #19	KPTN (ENSCATG00000031555) #20	SLC8A2 (ENSCATG00000019815) #21	MEIS3 (ENSCATG00000044534) #22	DHX34 (ENSCATG00000032316) #23	C5AR1 (ENSCATG00000032999) #24	CCDC9 (ENSCATG00000023465) #25	ENSCATG00000044506 #26	SAE1 (ENSCATG00000041175) ##27	ZC3H4 (ENSCATG00000039046) #28	TMEM160 (ENSCATG00000017019)	NPAS1 (ENSCATG00000044490) #29	ARHGAP35 (ENSCATG00000025751) #30	AP2S1 (ENSCATG00000030501) #31	SLC1A5 (ENSCATG00000041986) #32	FKRP (ENSCATG00000015421)	STRN4 (ENSCATG00000041998) #33	PRKD2 (ENSCATG00000012657) #34	DACT3 (ENSCATG00000028958) #35
Macaca	ANCESTRAL SPECIES	12	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.b ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.j #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.a.d	ENSGT00940000157783 #8	ENSGT01030000234606.a.b.d #9	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00390000017267.j ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.j #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34
Rhesus	MODERN SPECIES	10	PLA2G4C (ENSMMUG00000014293) #9	ELSPBP1 (ENSMMUG00000006857) #11	BSPH1 (ENSMMUG00000058643)	SULT2A1 (ENSMMUG00000056800) #12	ENSMMUG00000059253	CRX (ENSMMUG00000049999) #13	TPRX1 (ENSMMUG00000048019)	ENSMMUG00000061457	NOP53 (ENSMMUG00000013348) ##15	EHD2 (ENSMMUG00000040121) #16	BICRA (ENSMMUG00000019356) #17	ZNF541 (ENSMMUG00000014729) #18	NAPA (ENSMMUG00000014727) #19	KPTN (ENSMMUG00000014723) #20	SLC8A2 (ENSMMUG00000014718) #21	MEIS3 (ENSMMUG00000013009) #22	DHX34 (ENSMMUG00000009275) #23	C5AR2 (ENSMMUG00000009277) ##24	C5AR1 (ENSMMUG00000009278) #24	CCDC9 (ENSMMUG00000003075) #25	ENSMMUG00000012466 #26	ENSMMUG00000055893	SAE1 (ENSMMUG00000009506) #27	ZC3H4 (ENSMMUG00000014709) #28	TMEM160 (ENSMMUG00000057454)	NPAS1 (ENSMMUG00000011330) #29	ARHGAP35 (ENSMMUG00000011332) #30	AP2S1 (ENSMMUG00000000833) #31	SLC1A5 (ENSMMUG00000022163) #32	FKRP (ENSMMUG00000028743)	STRN4 (ENSMMUG00000017930) #33
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000061337	LIG1 (ENSMFAG00000010948) #8	PLA2G4C (ENSMFAG00000045458) #9	ENSMFAG00000035166 #11	SULT2A1 (ENSMFAG00000046325) #12	ENSMFAG00000052649	CRX (ENSMFAG00000039279) #13	SELENOW (ENSMFAG00000057852) #14	ENSMFAG00000051508	NOP53 (ENSMFAG00000045103) ##15	EHD2 (ENSMFAG00000045476) #16	ZNF541 (ENSMFAG00000008705) #18	NAPA (ENSMFAG00000000053) #19	KPTN (ENSMFAG00000039746) #20	SLC8A2 (ENSMFAG00000037527) #21	MEIS3 (ENSMFAG00000034069) #22	C5AR2 (ENSMFAG00000064310) ##24	C5AR1 (ENSMFAG00000064601) #24	CCDC9 (ENSMFAG00000002381) #25	BBC3 (ENSMFAG00000033464)	SAE1 (ENSMFAG00000046126) #27	ENSMFAG00000048737	ENSMFAG00000001653	NPAS1 (ENSMFAG00000018045) #29	ARHGAP35 (ENSMFAG00000041192) #30	AP2S1 (ENSMFAG00000022670) #31	SLC1A5 (ENSMFAG00000044927) #32	STRN4 (ENSMFAG00000035843) #33	PRKD2 (ENSMFAG00000045883) #34	ENSMFAG00000030779 #35	ENSMFAG00000044510 #36
Pig-tailed macaque	MODERN SPECIES	551	PLA2G4C (ENSMNEG00000029999) #9	CABP5 (ENSMNEG00000029058) #10	ELSPBP1 (ENSMNEG00000027813) #11	BSPH1 (ENSMNEG00000029609)	SULT2A1 (ENSMNEG00000038830) #12	CRX (ENSMNEG00000032189) #13	TPRX1 (ENSMNEG00000041107)	SELENOW (ENSMNEG00000035729) #14	ENSMNEG00000042540 ##15	EHD2 (ENSMNEG00000029528) #16	BICRA (ENSMNEG00000045550) #17	ZNF541 (ENSMNEG00000031984) #18	NAPA (ENSMNEG00000033334) #19	KPTN (ENSMNEG00000035130) #20	SLC8A2 (ENSMNEG00000032344) #21	MEIS3 (ENSMNEG00000045404) #22	DHX34 (ENSMNEG00000038649) #23	C5AR1 (ENSMNEG00000040235) #24	CCDC9 (ENSMNEG00000029240) #25	ENSMNEG00000009958 #26	ENSMNEG00000024262 #27	ZC3H4 (ENSMNEG00000039406) #28	TMEM160 (ENSMNEG00000026327)	NPAS1 (ENSMNEG00000038438) #29	ARHGAP35 (ENSMNEG00000029940) #30	AP2S1 (ENSMNEG00000036216) #31	SLC1A5 (ENSMNEG00000040803) #32	FKRP (ENSMNEG00000013306)	STRN4 (ENSMNEG00000042544) #33	PRKD2 (ENSMNEG00000038676) #34	DACT3 (ENSMNEG00000005969) #35
Vervet Monkey	MODERN SPECIES	25	LIG1 (ENSCSAG00000002897) #8	PLA2G4C (ENSCSAG00000002903) #9	CABP5 (ENSCSAG00000002905) #10	ELSPBP1 (ENSCSAG00000002911) #11	BSPH1 (ENSCSAG00000002916)	SULT2A1 (ENSCSAG00000002919) #12	CRX (ENSCSAG00000002921) #13	SELENOW (ENSCSAG00000002926) #14	ENSCSAG00000002928 ##15	EHD2 (ENSCSAG00000002930) #16	BICRA (ENSCSAG00000002933) #17	ENSCSAG00000002936 #18	NAPA (ENSCSAG00000002939) #19	KPTN (ENSCSAG00000002944) #20	SLC8A2 (ENSCSAG00000002946) #21	MEIS3 (ENSCSAG00000002950) #22	DHX34 (ENSCSAG00000002965) #23	C5AR2 (ENSCSAG00000019638) ##24	C5AR1 (ENSCSAG00000002973) #24	ENSCSAG00000019637	CCDC9 (ENSCSAG00000002974) #25	BBC3 (ENSCSAG00000002981)	SAE1 (ENSCSAG00000002984) ##27	ZC3H4 (ENSCSAG00000002989) #28	TMEM160 (ENSCSAG00000002993)	NPAS1 (ENSCSAG00000003006) #29	ARHGAP35 (ENSCSAG00000003015) #30	ENSCSAG00000019636	ENSCSAG00000003016 #32	FKRP (ENSCSAG00000019635)	STRN4 (ENSCSAG00000003022) #33
Rhinopithecus	ANCESTRAL SPECIES	16	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.b ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00710000107236 #26	ENSGT00550000075007.i.b ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34
Black snub-nosed monkey	MODERN SPECIES	111	PLA2G4C (ENSRBIG00000031023) #9	CABP5 (ENSRBIG00000043674) #10	ELSPBP1 (ENSRBIG00000039740) #11	BSPH1 (ENSRBIG00000043547)	SULT2A1 (ENSRBIG00000035608) #12	ENSRBIG00000039568	TPRX1 (ENSRBIG00000031002)	SELENOW (ENSRBIG00000031185) #14	ENSRBIG00000036427 ##15	EHD2 (ENSRBIG00000035965) #16	BICRA (ENSRBIG00000039397) #17	ZNF541 (ENSRBIG00000027044) #18	NAPA (ENSRBIG00000027994) #19	KPTN (ENSRBIG00000039197) #20	SLC8A2 (ENSRBIG00000030127) #21	MEIS3 (ENSRBIG00000027626) #22	DHX34 (ENSRBIG00000037382) #23	CCDC9 (ENSRBIG00000035248) #25	ENSRBIG00000031139 #26	SAE1 (ENSRBIG00000037933) ##27	ZC3H4 (ENSRBIG00000027984) #28	TMEM160 (ENSRBIG00000039420)	NPAS1 (ENSRBIG00000042290) #29	ENSRBIG00000034879	ENSRBIG00000029587	AACS (ENSRBIG00000039115)	BRI3BP (ENSRBIG00000032003)	DHX37 (ENSRBIG00000043457)	ENSRBIG00000028284	ENSRBIG00000023396	SCARB1 (ENSRBIG00000041753)
Golden snub-nosed monkey	MODERN SPECIES	2027	PLA2G4C (ENSRROG00000042138) #9	CABP5 (ENSRROG00000042418) #10	ELSPBP1 (ENSRROG00000042315) #11	BSPH1 (ENSRROG00000045761)	SULT2A1 (ENSRROG00000034211) #12	CRX (ENSRROG00000025759) #13	TPRX1 (ENSRROG00000043121)	SELENOW (ENSRROG00000030554) #14	ENSRROG00000042298 ##15	EHD2 (ENSRROG00000043148) #16	BICRA (ENSRROG00000026604) #17	ZNF541 (ENSRROG00000044146) #18	NAPA (ENSRROG00000037389) #19	KPTN (ENSRROG00000036495) #20	SLC8A2 (ENSRROG00000045566) #21	MEIS3 (ENSRROG00000029017) #22	DHX34 (ENSRROG00000042872) #23	C5AR1 (ENSRROG00000034629) #24	INAFM1 (ENSRROG00000036821)	CCDC9 (ENSRROG00000025974) #25	ENSRROG00000040712 #26	SAE1 (ENSRROG00000031746) ##27	ZC3H4 (ENSRROG00000032920) #28	TMEM160 (ENSRROG00000043669)	NPAS1 (ENSRROG00000043828) #29	ARHGAP35 (ENSRROG00000035853) #30	AP2S1 (ENSRROG00000045451) #31	SLC1A5 (ENSRROG00000038480) #32	FKRP (ENSRROG00000007497)	STRN4 (ENSRROG00000042099) #33	PRKD2 (ENSRROG00000034944) #34
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00960000191916	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.a.a ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.i.b ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Gibbon	MODERN SPECIES	7	CATSPERD (ENSNLEG00000013718)	ENSNLEG00000013730	DUS3L (ENSNLEG00000013734)	NRTN (ENSNLEG00000013785)	ENSNLEG00000034850	ENSNLEG00000013795	ENSNLEG00000003385	ENSNLEG00000030217 ##14	ENSNLEG00000003143 ##15	ENSNLEG00000034480 #16	ENSNLEG00000003119 #17	ENSNLEG00000034044 #18	ENSNLEG00000031845	KPTN (ENSNLEG00000003092) #20	ENSNLEG00000003082 #21	MEIS3 (ENSNLEG00000003031) #22	DHX34 (ENSNLEG00000003010) #23	C5AR1 (ENSNLEG00000018412) #24	INAFM1 (ENSNLEG00000018411)	CCDC9 (ENSNLEG00000002990) #25	ENSNLEG00000018410	ENSNLEG00000002975 #26	SAE1 (ENSNLEG00000002965) ##27	ZC3H4 (ENSNLEG00000034259) #28	TMEM160 (ENSNLEG00000002960)	NPAS1 (ENSNLEG00000002946) #29	ARHGAP35 (ENSNLEG00000002923) #30	AP2S1 (ENSNLEG00000002895) #31	ENSNLEG00000029695 #32	ENSNLEG00000035781	STRN4 (ENSNLEG00000002817) #33
Hominidae	ANCESTRAL SPECIES		ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00960000191916	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00940000161069.e.b #14	ENSGT00390000017267.i.a.a ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.i.b ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Orangutan	MODERN SPECIES	10	ENSPPYG00000010188	PLA2G4C (ENSPPYG00000010187) #9	CABP5 (ENSPPYG00000010186) #10	ELSPBP1 (ENSPPYG00000010185) #11	BSPH1 (ENSPPYG00000035619)	SULT2A1 (ENSPPYG00000010184) #12	ENSPPYG00000030562	SELENOW (ENSPPYG00000010182) #14	ENSPPYG00000010181 ##15	EHD2 (ENSPPYG00000010180) #16	BICRA (ENSPPYG00000010179) #17	ZNF541 (ENSPPYG00000010178) #18	NAPA (ENSPPYG00000010177) #19	KPTN (ENSPPYG00000010176) #20	SLC8A2 (ENSPPYG00000010175) #21	MEIS3 (ENSPPYG00000010173) #22	DHX34 (ENSPPYG00000010172) #23	C5AR2 (ENSPPYG00000010171) ##24	C5AR1 (ENSPPYG00000032120) #24	CCDC9 (ENSPPYG00000010170) #25	ENSPPYG00000010169 #26	SAE1 (ENSPPYG00000010168) ##27	ZC3H4 (ENSPPYG00000010167) #28	TMEM160 (ENSPPYG00000032917)	NPAS1 (ENSPPYG00000010165) #29	ARHGAP35 (ENSPPYG00000010164) #30	AP2S1 (ENSPPYG00000010163) #31	SLC1A5 (ENSPPYG00000010161) #32	FKRP (ENSPPYG00000010160)	STRN4 (ENSPPYG00000010159) #33	PRKD2 (ENSPPYG00000010158) #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00940000164595.b	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a #14	ENSGT00390000017267.i.a.a ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.i.b ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00940000164595.b	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a #14	ENSGT00390000017267.i.a.a ##15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.i.b ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Pan	ANCESTRAL SPECIES	9	ENSGT00940000154432.f #12	ENSGT00940000164595.b	ENSGT00940000161634 #13	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a #14	ENSGT00390000017267.i.a.a ##15	ENSGT00390000017267.i.a.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007.i.b ##27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Chimpanzee	MODERN SPECIES	10	ELSPBP1 (ENSPTRG00000011221) #11	BSPH1 (ENSPTRG00000011220)	SULT2A1 (ENSPTRG00000011219) #12	ENSPTRG00000052710	CRX (ENSPTRG00000011217) #13	TPRX1 (ENSPTRG00000028949)	ENSPTRG00000049635	SELENOW (ENSPTRG00000011216) #14	NOP53 (ENSPTRG00000011215) ##15	EHD2 (ENSPTRG00000011214) #16	ENSPTRG00000011213 #17	ZNF541 (ENSPTRG00000011212) #18	NAPA (ENSPTRG00000011211) #19	KPTN (ENSPTRG00000011210) #20	SLC8A2 (ENSPTRG00000011209) #21	MEIS3 (ENSPTRG00000011208) #22	DHX34 (ENSPTRG00000011207) #23	C5AR2 (ENSPTRG00000041525) ##24	C5AR1 (ENSPTRG00000028958) #24	INAFM1 (ENSPTRG00000040861)	CCDC9 (ENSPTRG00000011204) #25	BBC3 (ENSPTRG00000011203) #26	SAE1 (ENSPTRG00000011202) ##27	ZC3H4 (ENSPTRG00000011201) #28	TMEM160 (ENSPTRG00000011200)	NPAS1 (ENSPTRG00000011199) #29	ARHGAP35 (ENSPTRG00000011198) #30	AP2S1 (ENSPTRG00000011197) #31	SLC1A5 (ENSPTRG00000011194) #32	FKRP (ENSPTRG00000050198)	STRN4 (ENSPTRG00000011192) #33
Bonobo	MODERN SPECIES	10	PLA2G4C (ENSPPAG00000043463) #9	CABP5 (ENSPPAG00000039821) #10	ELSPBP1 (ENSPPAG00000020685) #11	BSPH1 (ENSPPAG00000043793)	SULT2A1 (ENSPPAG00000041390) #12	ENSPPAG00000037685	SELENOW (ENSPPAG00000036760) #14	ENSPPAG00000032995 #15	EHD2 (ENSPPAG00000039669) #16	BICRA (ENSPPAG00000003935) #17	ZNF541 (ENSPPAG00000039092) #18	NAPA (ENSPPAG00000033696) #19	KPTN (ENSPPAG00000008738) #20	SLC8A2 (ENSPPAG00000030149) #21	ENSPPAG00000024281	ENSPPAG00000016062 #22	DHX34 (ENSPPAG00000029582) #23	C5AR2 (ENSPPAG00000023287) ##24	C5AR1 (ENSPPAG00000027323) #24	CCDC9 (ENSPPAG00000036850) #25	ENSPPAG00000039786	SAE1 (ENSPPAG00000032113) ##27	ZC3H4 (ENSPPAG00000037610) #28	TMEM160 (ENSPPAG00000040416)	NPAS1 (ENSPPAG00000040385) #29	ARHGAP35 (ENSPPAG00000035858) #30	ENSPPAG00000021619 #31	SLC1A5 (ENSPPAG00000040539) #32	FKRP (ENSPPAG00000037227)	STRN4 (ENSPPAG00000035898) #33	PRKD2 (ENSPPAG00000037267) #34
Human	MODERN SPECIES	10	CABP5 (ENSG00000105507) #10	ELSPBP1 (ENSG00000169393) #11	BSPH1 (ENSG00000188334)	SULT2A1 (ENSG00000105398) #12	TPRX2 (ENSG00000259009)	CRX (ENSG00000105392) #13	TPRX1 (ENSG00000178928)	SELENOW (ENSG00000178980) #14	NOP53 (ENSG00000105373) ##15	EHD2 (ENSG00000024422) #16	BICRA (ENSG00000063169) #17	ZNF541 (ENSG00000118156) #18	NAPA (ENSG00000105402) #19	KPTN (ENSG00000118162) #20	SLC8A2 (ENSG00000118160) #21	MEIS3 (ENSG00000105419) #22	DHX34 (ENSG00000134815) #23	C5AR2 (ENSG00000134830) ##24	C5AR1 (ENSG00000197405) #24	INAFM1 (ENSG00000257704)	CCDC9 (ENSG00000105321) #25	BBC3 (ENSG00000105327)	SAE1 (ENSG00000142230) ##27	ZC3H4 (ENSG00000130749) #28	TMEM160 (ENSG00000130748)	NPAS1 (ENSG00000130751) #29	ARHGAP35 (ENSG00000160007) #30	AP2S1 (ENSG00000042753) #31	SLC1A5 (ENSG00000105281) #32	FKRP (ENSG00000181027)	STRN4 (ENSG00000090372) #33
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	18	RNF112 (ENSGGOG00000001030)	SLC47A1 (ENSGGOG00000016236)	ALDH3A2 (ENSGGOG00000007664)	SLC47A2 (ENSGGOG00000007670)	ALDH3A1 (ENSGGOG00000007682)	ENSGGOG00000042248	ULK2 (ENSGGOG00000007689)	AKAP10 (ENSGGOG00000034845)	ENSGGOG00000040814	ENSGGOG00000024511	SPECC1 (ENSGGOG00000001874)	ENSGGOG00000042226	ENSGGOG00000041219	ENSGGOG00000021951	ENSGGOG00000004314	ENSGGOG00000027850 #22	ENSGGOG00000038364	ENSGGOG00000016448	ENSGGOG00000009640	USP22 (ENSGGOG00000008595)	DHRS7B (ENSGGOG00000008471)	TMEM11 (ENSGGOG00000008476)	NATD1 (ENSGGOG00000016265)	MAP2K3 (ENSGGOG00000000670)	KCNJ18 (ENSGGOG00000040998)	ENSGGOG00000041142	WSB1 (ENSGGOG00000015361)	ENSGGOG00000040351	KSR1 (ENSGGOG00000000817)	LGALS9 (ENSGGOG00000022973)	NOS2 (ENSGGOG00000000820)
Gorilla	MODERN SPECIES	10	ELSPBP1 (ENSGGOG00000001477) #11	BSPH1 (ENSGGOG00000000055)	SULT2A1 (ENSGGOG00000012156) #12	TPRX2 (ENSGGOG00000040885)	CRX (ENSGGOG00000016158) #13	TPRX1 (ENSGGOG00000009265)	ENSGGOG00000040974	SELENOW (ENSGGOG00000012269) #14	NOP53 (ENSGGOG00000005462) ##15	EHD2 (ENSGGOG00000002346) #16	BICRA (ENSGGOG00000012809) #17	ZNF541 (ENSGGOG00000000277) #18	NAPA (ENSGGOG00000000703) #19	KPTN (ENSGGOG00000000702) #20	SLC8A2 (ENSGGOG00000011557) #21	ENSGGOG00000001093 #22	DHX34 (ENSGGOG00000010037) #23	C5AR2 (ENSGGOG00000016452) ##24	C5AR1 (ENSGGOG00000008622) #24	INAFM1 (ENSGGOG00000027893)	CCDC9 (ENSGGOG00000015097) #25	ENSGGOG00000040116 #26	SAE1 (ENSGGOG00000013078) ##27	ENSGGOG00000039096	ZC3H4 (ENSGGOG00000013071) #28	TMEM160 (ENSGGOG00000013410)	NPAS1 (ENSGGOG00000013398) #29	ARHGAP35 (ENSGGOG00000027302) #30	ENSGGOG00000011254 #31	SLC1A5 (ENSGGOG00000008792) #32	FKRP (ENSGGOG00000043279)
Platyrrhini	ANCESTRAL SPECIES	20	ENSGT00390000011694 #7	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000154432.g #12	ENSGT00940000161634 #13	ENSGT00940000161069.e.b #14	ENSGT00940000161069.e.a ##14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00710000107236 #26	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000157783 #8	ENSGT00390000011694 #7	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000154432.g #12	ENSGT00940000161634 #13	ENSGT00940000161069.e.b #14	ENSGT00940000161069.e.a ##14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34
Marmoset	MODERN SPECIES	14	CARD8 (ENSCJAG00000000489)	LIG1 (ENSCJAG00000000504) #8	ENSCJAG00000076045 #7	ENSCJAG00000071055 #7	CABP5 (ENSCJAG00000008133) #10	SULT2A1 (ENSCJAG00000005269) #12	CRX (ENSCJAG00000078298) #13	SELENOW (ENSCJAG00000043185) #14	NOP53 (ENSCJAG00000011385) #15	EHD2 (ENSCJAG00000011415) #16	BICRA (ENSCJAG00000011418) #17	ZNF541 (ENSCJAG00000011435) #18	NAPA (ENSCJAG00000042205) #19	KPTN (ENSCJAG00000011460) #20	SLC8A2 (ENSCJAG00000070619) #21	MEIS3 (ENSCJAG00000011475) #22	DHX34 (ENSCJAG00000011504) #23	ENSCJAG00000072119	C5AR2 (ENSCJAG00000011534) ##24	C5AR1 (ENSCJAG00000073054) #24	INAFM1 (ENSCJAG00000074475)	CCDC9 (ENSCJAG00000011548) #25	ENSCJAG00000083080 #26	SAE1 (ENSCJAG00000011565) #27	ZC3H4 (ENSCJAG00000011601) #28	TMEM160 (ENSCJAG00000082760)	NPAS1 (ENSCJAG00000076811) #29	ARHGAP35 (ENSCJAG00000011701) #30	ENSCJAG00000072578	ENSCJAG00000011710 #31	SLC1A5 (ENSCJAG00000011717) #32
Cebidae_a	ANCESTRAL SPECIES	20	ENSGT00830000128447	ENSGT00940000157783 #8	ENSGT00390000011694 #7	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000154432.g #12	ENSGT00940000161634 #13	ENSGT00940000161069.e.a ##14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34	ENSGT00950000183181.B.b #35
Capuchin	MODERN SPECIES	266	ENSCCAG00000030878	LIG1 (ENSCCAG00000022254) #8	ZSWIM9 (ENSCCAG00000022754) #7	CABP5 (ENSCCAG00000029328) #10	ENSCCAG00000027792 #11	SULT2A1 (ENSCCAG00000020859) #12	CRX (ENSCCAG00000034793) #13	ENSCCAG00000024879 ##14	NOP53 (ENSCCAG00000025477) #15	EHD2 (ENSCCAG00000035777) #16	BICRA (ENSCCAG00000026467) #17	ZNF541 (ENSCCAG00000037140) #18	NAPA (ENSCCAG00000033321) #19	KPTN (ENSCCAG00000027753) #20	SLC8A2 (ENSCCAG00000014965) #21	MEIS3 (ENSCCAG00000003816) #22	DHX34 (ENSCCAG00000028675) #23	C5AR1 (ENSCCAG00000035091) #24	CCDC9 (ENSCCAG00000028908) #25	ENSCCAG00000026596 #26	SAE1 (ENSCCAG00000031780) #27	ZC3H4 (ENSCCAG00000037597) #28	TMEM160 (ENSCCAG00000031011)	NPAS1 (ENSCCAG00000032406) #29	ENSCCAG00000021097	ARHGAP35 (ENSCCAG00000022601) #30	AP2S1 (ENSCCAG00000028431) #31	SLC1A5 (ENSCCAG00000033717) #32	FKRP (ENSCCAG00000015087)	STRN4 (ENSCCAG00000034066) #33	PRKD2 (ENSCCAG00000032043) #34
Mas night monkey	MODERN SPECIES	1284	LIG1 (ENSANAG00000025847) #8	ZSWIM9 (ENSANAG00000037000) #7	CABP5 (ENSANAG00000036055) #10	ELSPBP1 (ENSANAG00000021618) #11	SULT2A1 (ENSANAG00000008443) #12	CRX (ENSANAG00000036213) #13	ENSANAG00000038368	NOP53 (ENSANAG00000007933) #15	EHD2 (ENSANAG00000031077) #16	BICRA (ENSANAG00000021909) #17	ZNF541 (ENSANAG00000034121) #18	NAPA (ENSANAG00000029662) #19	KPTN (ENSANAG00000030248) #20	SLC8A2 (ENSANAG00000033218) #21	ENSANAG00000034504	MEIS3 (ENSANAG00000037100) #22	DHX34 (ENSANAG00000038287) #23	C5AR1 (ENSANAG00000031163) #24	INAFM1 (ENSANAG00000035853)	CCDC9 (ENSANAG00000020361) #25	ENSANAG00000037922 #26	SAE1 (ENSANAG00000023379) #27	ZC3H4 (ENSANAG00000023963) #28	TMEM160 (ENSANAG00000026707)	NPAS1 (ENSANAG00000036771) #29	ARHGAP35 (ENSANAG00000000237) #30	ENSANAG00000022565	AP2S1 (ENSANAG00000024767) #31	SLC1A5 (ENSANAG00000021437) #32	FKRP (ENSANAG00000019314)	STRN4 (ENSANAG00000032421) #33
Tarsier	MODERN SPECIES	2205																MEIS3 (ENSTSYG00000028178) #22	DHX34 (ENSTSYG00000031168) #23
Strepsirrhini	ANCESTRAL SPECIES	16	ENSGT00940000157783 #8	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Bushbaby	MODERN SPECIES	267					ENSOGAG00000030968 #12	ENSOGAG00000025340	CRX (ENSOGAG00000034554) #13	ENSOGAG00000028694	NOP53 (ENSOGAG00000024300) #15	EHD2 (ENSOGAG00000033142) #16	BICRA (ENSOGAG00000002399) #17	ZNF541 (ENSOGAG00000002397) #18	NAPA (ENSOGAG00000032621) #19	KPTN (ENSOGAG00000009999) #20	SLC8A2 (ENSOGAG00000029237) #21	MEIS3 (ENSOGAG00000002063) #22	DHX34 (ENSOGAG00000002061) #23	C5AR2 (ENSOGAG00000033946) ##24	C5AR1 (ENSOGAG00000000133) #24	INAFM1 (ENSOGAG00000029523)	CCDC9 (ENSOGAG00000015701) #25	BBC3 (ENSOGAG00000034738)	SAE1 (ENSOGAG00000007650) #27	ZC3H4 (ENSOGAG00000031123) #28	TMEM160 (ENSOGAG00000033520)	NPAS1 (ENSOGAG00000012829) #29	ARHGAP35 (ENSOGAG00000033334) #30	AP2S1 (ENSOGAG00000033467) #31	SLC1A5 (ENSOGAG00000033704) #32	FKRP (ENSOGAG00000026248)	STRN4 (ENSOGAG00000015276) #33
Lemuriformes	ANCESTRAL SPECIES	15	ENSGT00940000157783 #8	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Mouse lemur	MODERN SPECIES	14	LIG1 (ENSMICG00000007160) #8	CABP5 (ENSMICG00000007151) #10	ELSPBP1 (ENSMICG00000007142) #11	ENSMICG00000041886	SULT2A1 (ENSMICG00000037551) #12	ENSMICG00000035603	CRX (ENSMICG00000042307) #13	SELENOW (ENSMICG00000012606) #14	NOP53 (ENSMICG00000005580) #15	EHD2 (ENSMICG00000005571) #16	BICRA (ENSMICG00000028080) #17	ZNF541 (ENSMICG00000017737) #18	NAPA (ENSMICG00000011599) #19	KPTN (ENSMICG00000026946) #20	SLC8A2 (ENSMICG00000030836) #21	MEIS3 (ENSMICG00000031566) #22	DHX34 (ENSMICG00000011585) #23	C5AR1 (ENSMICG00000045174) #24	CCDC9 (ENSMICG00000008823) #25	ENSMICG00000008820 #26	SAE1 (ENSMICG00000008807) #27	ZC3H4 (ENSMICG00000008786) #28	TMEM160 (ENSMICG00000035539)	NPAS1 (ENSMICG00000006346) #29	ARHGAP35 (ENSMICG00000037921) #30	AP2S1 (ENSMICG00000038528) #31	SLC1A5 (ENSMICG00000000030) #32	FKRP (ENSMICG00000043598)	STRN4 (ENSMICG00000015400) #33	PRKD2 (ENSMICG00000015377) #34	DACT3 (ENSMICG00000042964) #35
Lemuriformes_a	ANCESTRAL SPECIES	5	ENSGT00940000157783 #8	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Coquerels sifaka	MODERN SPECIES	568	SMARCA1 (ENSPCOG00000020722)	ZSWIM9 (ENSPCOG00000016877) #7	LIG1 (ENSPCOG00000027835) #8	CABP5 (ENSPCOG00000028027) #10	ENSPCOG00000019131 #11	SULT2A1 (ENSPCOG00000014554) #12	CRX (ENSPCOG00000021790) #13	SELENOW (ENSPCOG00000013997) #14	NOP53 (ENSPCOG00000016124) #15	EHD2 (ENSPCOG00000010027) #16	BICRA (ENSPCOG00000017166) #17	ZNF541 (ENSPCOG00000006138) #18	NAPA (ENSPCOG00000014946) #19	KPTN (ENSPCOG00000022678) #20	SLC8A2 (ENSPCOG00000023795) #21	MEIS3 (ENSPCOG00000024690) #22	DHX34 (ENSPCOG00000027801) #23	CCDC9 (ENSPCOG00000020816) #25	ENSPCOG00000019970 #26	SAE1 (ENSPCOG00000018619) #27	ZC3H4 (ENSPCOG00000017169) #28	TMEM160 (ENSPCOG00000028665)	NPAS1 (ENSPCOG00000017882) #29	ARHGAP35 (ENSPCOG00000015788) #30	AP2S1 (ENSPCOG00000022192) #31	SLC1A5 (ENSPCOG00000024625) #32	FKRP (ENSPCOG00000008360)	STRN4 (ENSPCOG00000028165) #33	PRKD2 (ENSPCOG00000018544) #34	DACT3 (ENSPCOG00000024045) #35	GNG8 (ENSPCOG00000014293) #36
Greater bamboo lemur	MODERN SPECIES	67	ZSWIM9 (ENSPSMG00000024028) #7	LIG1 (ENSPSMG00000024001) #8	CABP5 (ENSPSMG00000023902) #10	ELSPBP1 (ENSPSMG00000023896) #11	BSPH1 (ENSPSMG00000023887)	ENSPSMG00000023884	SULT2A1 (ENSPSMG00000023880) #12	CRX (ENSPSMG00000023876) #13	SELENOW (ENSPSMG00000023871) #14	NOP53 (ENSPSMG00000023860) #15	EHD2 (ENSPSMG00000023831) #16	ZNF541 (ENSPSMG00000023826) #18	NAPA (ENSPSMG00000023803) #19	KPTN (ENSPSMG00000023747) #20	SLC8A2 (ENSPSMG00000023733) #21	MEIS3 (ENSPSMG00000023720) #22	DHX34 (ENSPSMG00000023684) #23	C5AR2 (ENSPSMG00000023674) ##24	C5AR1 (ENSPSMG00000023671) #24	INAFM1 (ENSPSMG00000023664)	CCDC9 (ENSPSMG00000023662) #25	BBC3 (ENSPSMG00000023660)	SAE1 (ENSPSMG00000023654) #27	ENSPSMG00000023638	ZC3H4 (ENSPSMG00000023633) #28	TMEM160 (ENSPSMG00000023618)	NPAS1 (ENSPSMG00000023615) #29
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432 #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Glires	ANCESTRAL SPECIES	6	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432 #12	ENSGT00940000163805	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Lagomorpha	ANCESTRAL SPECIES	135												ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34	ENSGT00950000183181.B.b #35
Rabbit	MODERN SPECIES	568												ZNF541 (ENSOCUG00000000969) #18	NAPA (ENSOCUG00000000967) #19	KPTN (ENSOCUG00000024733) #20	ENSOCUG00000031820 #21	MEIS3 (ENSOCUG00000025760) #22	DHX34 (ENSOCUG00000014005) #23	C5AR2 (ENSOCUG00000025530) ##24	C5AR1 (ENSOCUG00000022167) #24	CCDC9 (ENSOCUG00000013560) #25	BBC3 (ENSOCUG00000037839)	SAE1 (ENSOCUG00000024320) #27	ZC3H4 (ENSOCUG00000026069) #28	TMEM160 (ENSOCUG00000023097)	NPAS1 (ENSOCUG00000016061) #29	ARHGAP35 (ENSOCUG00000017126) #30	ENSOCUG00000039332	SLC1A5 (ENSOCUG00000009144) #32	FKRP (ENSOCUG00000000122)	STRN4 (ENSOCUG00000021418) #33	PRKD2 (ENSOCUG00000026784) #34
Pika	MODERN SPECIES	1283																MEIS3 (ENSOPRG00000011915) #22	ENSOPRG00000011872 #23	ENSOPRG00000011863 ##24
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432.n #12	ENSGT00940000163805	ENSGT00940000154432.m.a #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00940000157783 #8	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00940000167173	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583
Myomorpha	ANCESTRAL SPECIES	20	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.b #12	ENSGT00940000154432.m.a #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Muroidea	ANCESTRAL SPECIES	18	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.b #12	ENSGT00940000154432.m.a #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000157783 #8	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a.c #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #31
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000157783 #8	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a.c #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #31
Mus	ANCESTRAL SPECIES		ENSGT00940000157783 #8	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a.c #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #31
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000160506 #10	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a.c.c #12	ENSGT00390000000605.B.a	ENSGT00940000161634 #13	ENSGT00800000124482	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #31
Mus_B	ANCESTRAL SPECIES		ENSGT00940000154432.m.a.c.c.b #12	ENSGT00940000154432.m.a.c.d #12	ENSGT00390000000605.A	ENSGT00940000154432.m.b #12	ENSGT00390000000605.B.a.a	ENSGT00940000161634 #13	ENSGT00800000124482.b.a	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #31
Mouse	MODERN SPECIES	16	Obox7 (ENSMUSG00000055942)	Obox2 (ENSMUSG00000074369)	Obox1 (ENSMUSG00000054310)	Obox3 (ENSMUSG00000066772)	Obox5 (ENSMUSG00000074366)	Obox6 (ENSMUSG00000041583)	Crx (ENSMUSG00000041578) #13	Selenow (ENSMUSG00000041571) #14	Nop53 (ENSMUSG00000041560) #15	Ehd2 (ENSMUSG00000074364) #16	Bicra (ENSMUSG00000070808) #17	Zfp541 (ENSMUSG00000078796) #18	Napa (ENSMUSG00000006024) #19	Kptn (ENSMUSG00000006021) #20	Slc8a2 (ENSMUSG00000030376) #21	Meis3 (ENSMUSG00000041420) #22	Dhx34 (ENSMUSG00000006019) #23	C5ar2 (ENSMUSG00000074361) ##24	C5ar1 (ENSMUSG00000049130) #24	Inafm1 (ENSMUSG00000091811)	Ccdc9 (ENSMUSG00000041375) #25	Bbc3 (ENSMUSG00000002083)	Sae1 (ENSMUSG00000052833) #27	Zc3h4 (ENSMUSG00000059273) #28	Tmem160 (ENSMUSG00000019158)	Npas1 (ENSMUSG00000001988) #29	Arhgap35 (ENSMUSG00000058230) #30	Ceacam15 (ENSMUSG00000078795)	Ceacam9 (ENSMUSG00000007209)	Ap2s1 (ENSMUSG00000008036) #31	Slc1a5 (ENSMUSG00000001918) #32
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000154432.m.a.c.d #12	ENSGT00390000000605.A	ENSGT00940000154432.m.b #12	ENSGT01030000234553.b.b.c.a.a.b.b.a.b.b	ENSGT00390000000605.B.a.a	ENSGT00940000161634 #13	ENSGT00800000124482.b.a	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #31
Steppe mouse	MODERN SPECIES	2772					Obox6 (ENSMSIG00000018548)	Crx (ENSMSIG00000018526) #13	ENSMSIG00000018513	Selenow (ENSMSIG00000018481) #14	Nop53 (ENSMSIG00000018430) #15	Ehd2 (ENSMSIG00000018416) #16	Bicra (ENSMSIG00000018350) #17	Zfp541 (ENSMSIG00000018222) #18	Napa (ENSMSIG00000018190) #19	Kptn (ENSMSIG00000018154) #20	Slc8a2 (ENSMSIG00000018129) #21	Meis3 (ENSMSIG00000018072) #22	Dhx34 (ENSMSIG00000017946) #23	C5ar2 (ENSMSIG00000017934) ##24	C5ar1 (ENSMSIG00000017926) #24	Ccdc9 (ENSMSIG00000017868) #25	ENSMSIG00000017856	Sae1 (ENSMSIG00000017811) #27	Zc3h4 (ENSMSIG00000017751) #28	Tmem160 (ENSMSIG00000017740)	Npas1 (ENSMSIG00000017698) #29	Arhgap35 (ENSMSIG00000017677) #30	ENSMSIG00000017666	Ceacam15 (ENSMSIG00000017658)	ENSMSIG00000017649	ENSMSIG00000017638 #31
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0029210 #12	Obox8 (MGP_CAROLIEiJ_G0029211)	Sult2a8 (MGP_CAROLIEiJ_G0029212) #12	MGP_CAROLIEiJ_G0029213 #12	Obox6 (MGP_CAROLIEiJ_G0029214)	Crx (MGP_CAROLIEiJ_G0029215) #13	MGP_CAROLIEiJ_G0029216	MGP_CAROLIEiJ_G0029217 #14	Nop53 (MGP_CAROLIEiJ_G0029218) #15	Ehd2 (MGP_CAROLIEiJ_G0029219) #16	Bicra (MGP_CAROLIEiJ_G0029220) #17	Zfp541 (MGP_CAROLIEiJ_G0029221) #18	Napa (MGP_CAROLIEiJ_G0029222) #19	Kptn (MGP_CAROLIEiJ_G0029223) #20	Slc8a2 (MGP_CAROLIEiJ_G0029224) #21	Meis3 (MGP_CAROLIEiJ_G0029225) #22	Dhx34 (MGP_CAROLIEiJ_G0029226) #23	C5ar2 (MGP_CAROLIEiJ_G0029227) ##24	C5ar1 (MGP_CAROLIEiJ_G0029228) #24	Inafm1 (MGP_CAROLIEiJ_G0029229)	Ccdc9 (MGP_CAROLIEiJ_G0029230) #25	Bbc3 (MGP_CAROLIEiJ_G0029231)	Sae1 (MGP_CAROLIEiJ_G0029232) #27	MGP_CAROLIEiJ_G0029233 #28	Tmem160 (MGP_CAROLIEiJ_G0029234)	Npas1 (MGP_CAROLIEiJ_G0029235) #29	Arhgap35 (MGP_CAROLIEiJ_G0029236) #30	Ceacam15 (MGP_CAROLIEiJ_G0029237)	Ceacam9 (MGP_CAROLIEiJ_G0029238)	Ap2s1 (MGP_CAROLIEiJ_G0029239) #31	Slc1a5 (MGP_CAROLIEiJ_G0029240) #32
Shrew mouse	MODERN SPECIES	10	Zswim9 (MGP_PahariEiJ_G0021066) #7	Lig1 (MGP_PahariEiJ_G0021067) #8	Pla2g4c (MGP_PahariEiJ_G0021068) #9	Cabp5 (MGP_PahariEiJ_G0021069) #10	Bsph1 (MGP_PahariEiJ_G0021070)	MGP_PahariEiJ_G0021071	Crx (MGP_PahariEiJ_G0021072) #13	MGP_PahariEiJ_G0021073 #14	MGP_PahariEiJ_G0021074 #15	Ehd2 (MGP_PahariEiJ_G0021075) #16	Bicra (MGP_PahariEiJ_G0021076) #17	Zfp541 (MGP_PahariEiJ_G0021077) #18	Napa (MGP_PahariEiJ_G0021078) #19	Kptn (MGP_PahariEiJ_G0021079) #20	Slc8a2 (MGP_PahariEiJ_G0021080) #21	Meis3 (MGP_PahariEiJ_G0021081) #22	Dhx34 (MGP_PahariEiJ_G0021082) #23	C5ar2 (MGP_PahariEiJ_G0021083) ##24	C5ar1 (MGP_PahariEiJ_G0021084) #24	Inafm1 (MGP_PahariEiJ_G0021085)	Ccdc9 (MGP_PahariEiJ_G0021086) #25	Bbc3 (MGP_PahariEiJ_G0021087)	Sae1 (MGP_PahariEiJ_G0021088) #27	Zc3h4 (MGP_PahariEiJ_G0021089) #28	Tmem160 (MGP_PahariEiJ_G0021090)	Npas1 (MGP_PahariEiJ_G0021091) #29	Arhgap35 (MGP_PahariEiJ_G0021092) #30	Ceacam15 (MGP_PahariEiJ_G0021093)	Ceacam9 (MGP_PahariEiJ_G0021094)	Ap2s1 (MGP_PahariEiJ_G0021095) #31	Slc1a5 (MGP_PahariEiJ_G0021096) #32
Rat	MODERN SPECIES		Sult2a2 (ENSRNOG00000062869) #12	ENSRNOG00000066824	AABR07002622.1 (ENSRNOG00000038276)	Obox1 (ENSRNOG00000066811)	Crx (ENSRNOG00000013890) #13	Crxos1 (ENSRNOG00000038251)	LOC100360843 (ENSRNOG00000033146)	LOC100364427 (ENSRNOG00000062534)	Rpl9 (ENSRNOG00000028449)	Nop53 (ENSRNOG00000013023) #15	Ehd2 (ENSRNOG00000011346) #16	Bicra (ENSRNOG00000011262) #17	Zfp541 (ENSRNOG00000021800) #18	Napa (ENSRNOG00000001494) #19	Slc8a2 (ENSRNOG00000001492) #21	Meis3 (ENSRNOG00000021390) #22	Dhx34 (ENSRNOG00000047575) #23	AABR07002627.1 (ENSRNOG00000060587)	C5ar2 (ENSRNOG00000049028) ##24	ENSRNOG00000066925	Inafm1 (ENSRNOG00000048848) #25	Bbc3 (ENSRNOG00000062473)	Sae1 (ENSRNOG00000015128) #27	Zc3h4 (ENSRNOG00000015229) #28	Tmem160 (ENSRNOG00000015304)	Npas1 (ENSRNOG00000015376) #29	Arhgap35 (ENSRNOG00000015852) #30	Gng5 (ENSRNOG00000063636)	LOC102550403 (ENSRNOG00000065825)	LOC108349752 (ENSRNOG00000028617)	Ceacam9 (ENSRNOG00000046915)
Cricetidae	ANCESTRAL SPECIES	29								ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #31
Cricetidae_B	ANCESTRAL SPECIES	60								ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #31
Northern American deer mouse	MODERN SPECIES		Ethe1 (ENSPEMG00000023092)	Phldb3 (ENSPEMG00000022660)	Lypd3 (ENSPEMG00000021920)	Tex101 (ENSPEMG00000021573)	Cd177 (ENSPEMG00000022001)	ENSPEMG00000027693	ENSPEMG00000031382	Selenow (ENSPEMG00000005090) #14	Nop53 (ENSPEMG00000006856) #15	Ehd2 (ENSPEMG00000024916) #16	Bicra (ENSPEMG00000008834) #17	Zfp541 (ENSPEMG00000015026) #18	Napa (ENSPEMG00000009721) #19	Kptn (ENSPEMG00000000792) #20	Slc8a2 (ENSPEMG00000002691) #21	Meis3 (ENSPEMG00000005978) #22	Dhx34 (ENSPEMG00000017613) #23	C5ar2 (ENSPEMG00000010321) ##24	C5ar1 (ENSPEMG00000001838) #24	Inafm1 (ENSPEMG00000009541)	Ccdc9 (ENSPEMG00000015166) #25	Bbc3 (ENSPEMG00000014228)	Sae1 (ENSPEMG00000012499) #27	Zc3h4 (ENSPEMG00000009762) #28	Tmem160 (ENSPEMG00000012479)	Npas1 (ENSPEMG00000014696) #29	Arhgap35 (ENSPEMG00000017349) #30	ENSPEMG00000031358	Ceacam15 (ENSPEMG00000016683)	ENSPEMG00000008534	Ceacam9 (ENSPEMG00000003127)
Prairie vole	MODERN SPECIES	354	Slc27a5 (ENSMOCG00000004298)	Zbtb45 (ENSMOCG00000001388)	Trim28 (ENSMOCG00000015909)	Chmp2a (ENSMOCG00000003404)	Ube2m (ENSMOCG00000016295)	Mzf1 (ENSMOCG00000011386)	Crx (ENSMOCG00000020933) #13	ENSMOCG00000017884	Nop53 (ENSMOCG00000008367) #15	Ehd2 (ENSMOCG00000007010) #16	Bicra (ENSMOCG00000019348) #17	Zfp541 (ENSMOCG00000021811) #18	Napa (ENSMOCG00000006244) #19	ENSMOCG00000013711 #20	Slc8a2 (ENSMOCG00000005717) #21	Meis3 (ENSMOCG00000008970) #22	Dhx34 (ENSMOCG00000016843) #23	C5ar2 (ENSMOCG00000004764) ##24	Ccdc9 (ENSMOCG00000020124) #25	Bbc3 (ENSMOCG00000017283)	ENSMOCG00000016346 #27	Zc3h4 (ENSMOCG00000006492) #28	Tmem160 (ENSMOCG00000016966)	Npas1 (ENSMOCG00000014578) #29	Arhgap35 (ENSMOCG00000015867) #30	Ceacam9 (ENSMOCG00000018285)	Ap2s1 (ENSMOCG00000019574) #31	Slc1a5 (ENSMOCG00000009762) #32	Fkrp (ENSMOCG00000022172)	Strn4 (ENSMOCG00000000602) #33	Prkd2 (ENSMOCG00000004684) #34
Cricetinae	ANCESTRAL SPECIES	49								ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.a	ENSGT00970000193421.A #31	ENSGT00940000159485 #32
Chinese hamster chok1gshd	MODERN SPECIES	341								ENSCGRG00001019284 #14	Nop53 (ENSCGRG00001019033) #15	Ehd2 (ENSCGRG00001018635) #16	Bicra (ENSCGRG00001017944) #17	Zfp541 (ENSCGRG00001016947) #18	Napa (ENSCGRG00001004279) #19	Kptn (ENSCGRG00001017146) #20	Slc8a2 (ENSCGRG00001013525) #21	Meis3 (ENSCGRG00001010748) #22	ENSCGRG00001017077 #23	Dhx34 (ENSCGRG00001014694) #23	C5ar2 (ENSCGRG00001013288) ##24	C5ar1 (ENSCGRG00001012882) #24	Inafm1 (ENSCGRG00001010104)	Ccdc9 (ENSCGRG00001007536) #25	Bbc3 (ENSCGRG00001017224)	Sae1 (ENSCGRG00001016314) #27	Zc3h4 (ENSCGRG00001016116) #28	Tmem160 (ENSCGRG00001014723)	Npas1 (ENSCGRG00001013611) #29	Arhgap35 (ENSCGRG00001013301) #30	Ceacam15 (ENSCGRG00001017353)	Ceacam9 (ENSCGRG00001017245)	Ap2s1 (ENSCGRG00001015937) #31
Golden Hamster	MODERN SPECIES	836								Selenow (ENSMAUG00000014624) #14	Nop53 (ENSMAUG00000012617) #15	Ehd2 (ENSMAUG00000010317) #16	Bicra (ENSMAUG00000015992) #17	Zfp541 (ENSMAUG00000012586) #18	Napa (ENSMAUG00000008333) #19	ENSMAUG00000000883 #20	Slc8a2 (ENSMAUG00000010121) #21	Meis3 (ENSMAUG00000014202) #22	Dhx34 (ENSMAUG00000013394) #23	C5ar2 (ENSMAUG00000006533) ##24	C5ar1 (ENSMAUG00000003322) #24	ENSMAUG00000003963 #25	Bbc3 (ENSMAUG00000009202)	Sae1 (ENSMAUG00000007765) #27	ENSMAUG00000000957	Zc3h4 (ENSMAUG00000000068) #28	Tmem160 (ENSMAUG00000000893)	Npas1 (ENSMAUG00000001894) #29	Arhgap35 (ENSMAUG00000000172) #30	ENSMAUG00000009227	ENSMAUG00000008055	Ap2s1 (ENSMAUG00000019505) #31	Slc1a5 (ENSMAUG00000017083) #32
Upper Galilee mountains blind mole rat	MODERN SPECIES	501								Selenow (ENSNGAG00000001219) #14	Nop53 (ENSNGAG00000019894) #15	Ehd2 (ENSNGAG00000018699) #16	Bicra (ENSNGAG00000012259) #17	Zfp541 (ENSNGAG00000022695) #18	Napa (ENSNGAG00000000817) #19	ENSNGAG00000023937 #20	Slc8a2 (ENSNGAG00000011676) #21	Meis3 (ENSNGAG00000018810) #22	Dhx34 (ENSNGAG00000012974) #23	C5ar2 (ENSNGAG00000010859) ##24	C5ar1 (ENSNGAG00000009652) #24	ENSNGAG00000007282	Bbc3 (ENSNGAG00000004788)	ENSNGAG00000001209 #27	Zc3h4 (ENSNGAG00000020090) #28	Tmem160 (ENSNGAG00000019488)	Npas1 (ENSNGAG00000018097) #29	Arhgap35 (ENSNGAG00000016819) #30	Hif3a (ENSNGAG00000014207)	Ppp5c (ENSNGAG00000012794)	Pnma8a (ENSNGAG00000008259)	Pnma8b (ENSNGAG00000008913)	ENSNGAG00000004089
Lesser Egyptian jerboa	MODERN SPECIES	257					ENSJJAG00000011866 #12	Plekhf2 (ENSJJAG00000011954)	Crx (ENSJJAG00000014071) #13	Selenow (ENSJJAG00000007708) #14	Nop53 (ENSJJAG00000007854) #15	Ehd2 (ENSJJAG00000008621) #16	Bicra (ENSJJAG00000008900) #17	Zfp541 (ENSJJAG00000010932) #18	Napa (ENSJJAG00000011931) #19	ENSJJAG00000012597 #20	Slc8a2 (ENSJJAG00000013489) #21	Meis3 (ENSJJAG00000013989) #22	ENSJJAG00000013190
Kangaroo rat	MODERN SPECIES	475								Crx (ENSDORG00000027827) #13	ENSDORG00000016339 #15	Ehd2 (ENSDORG00000011700) #16	Bicra (ENSDORG00000025123) #17	Zfp541 (ENSDORG00000028161) #18	Napa (ENSDORG00000009995) #19	ENSDORG00000009993 #20	Slc8a2 (ENSDORG00000009991) #21	Meis3 (ENSDORG00000008441) #22	Dhx34 (ENSDORG00000008437) #23	C5ar1 (ENSDORG00000030050) #24	ENSDORG00000024050	ENSDORG00000029325	Sae1 (ENSDORG00000012199) #27	Zc3h4 (ENSDORG00000002726) #28	Tmem160 (ENSDORG00000002725)	Npas1 (ENSDORG00000002722) #29	Arhgap35 (ENSDORG00000001800) #30	Ap2s1 (ENSDORG00000015282) #31	Slc1a5 (ENSDORG00000008810) #32	Strn4 (ENSDORG00000005407) #33	Prkd2 (ENSDORG00000005405) #34	ENSDORG00000005404 #35	Gng8 (ENSDORG00000005403) #36
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432.n #12	ENSGT00940000163805	ENSGT00940000154432.m.a #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Sciuridae	ANCESTRAL SPECIES	5			ENSGT00940000163805	ENSGT00940000162766 #11	ENSGT00940000163003	ENSGT00940000154432.n #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a.j #33
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000154432.n.h.a.b.a.b.a #12	ENSGT00940000163003	ENSGT00940000154432.n.h.a.b.b #12	ENSGT00940000154432.n.h.a.a #12	ENSGT00940000163805	ENSGT00940000154432.n.g #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a.j #33
Marmotini_b	ANCESTRAL SPECIES	22	ENSGT00940000154432.n.h.a.b.a.b.a #12	ENSGT00940000154432.n.h.a.b.a.a #12	ENSGT00940000163003	ENSGT00940000154432.n.h.a.b.b #12	ENSGT00940000154432.n.h.a.a #12	ENSGT00940000163805	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a.j #33
Squirrel	MODERN SPECIES	264	ENSSTOG00000020452 #12	ENSSTOG00000023396 #12	ENSSTOG00000020676 #12	BSPH1 (ENSSTOG00000034649)	ENSSTOG00000025647 #12	ENSSTOG00000022010 #12	ENSSTOG00000021552	CRX (ENSSTOG00000024356) #13	NOP53 (ENSSTOG00000022092) #15	ENSSTOG00000011087 #16	BICRA (ENSSTOG00000028398) #17	ZNF541 (ENSSTOG00000026879) #18	NAPA (ENSSTOG00000006983) #19	KPTN (ENSSTOG00000006963) #20	SLC8A2 (ENSSTOG00000020165) #21	MEIS3 (ENSSTOG00000028182) #22	DHX34 (ENSSTOG00000015831) #23	C5AR2 (ENSSTOG00000023346) ##24	C5AR1 (ENSSTOG00000026678) #24	ENSSTOG00000005813 #25	SAE1 (ENSSTOG00000016251) #27	ZC3H4 (ENSSTOG00000016249) #28	TMEM160 (ENSSTOG00000024623)	NPAS1 (ENSSTOG00000003396) #29	ARHGAP35 (ENSSTOG00000011409) #30	SLC1A5 (ENSSTOG00000028576) #32	FKRP (ENSSTOG00000027896)	STRN4 (ENSSTOG00000025660) #33	PRKD2 (ENSSTOG00000026693) #34	ENSSTOG00000028905 #35	GNG8 (ENSSTOG00000024152) #36
Arctic ground squirrel	MODERN SPECIES	455							CRX (ENSUPAG00010010106) #13	ENSUPAG00010010102 #14	NOP53 (ENSUPAG00010010094) #15	EHD2 (ENSUPAG00010010085) #16	BICRA (ENSUPAG00010010059) #17	ZNF541 (ENSUPAG00010010048) #18	NAPA (ENSUPAG00010010015) #19	KPTN (ENSUPAG00010010006) #20	SLC8A2 (ENSUPAG00010009969) #21	MEIS3 (ENSUPAG00010009940) #22	DHX34 (ENSUPAG00010009871) #23	C5AR2 (ENSUPAG00010009867) ##24	C5AR1 (ENSUPAG00010009863) #24	INAFM1 (ENSUPAG00010009857)	CCDC9 (ENSUPAG00010009846) #25	BBC3 (ENSUPAG00010009844)	SAE1 (ENSUPAG00010009824) #27	ZC3H4 (ENSUPAG00010009793) #28	TMEM160 (ENSUPAG00010009790)	NPAS1 (ENSUPAG00010009764) #29	ARHGAP35 (ENSUPAG00010009739) #30	AP2S1 (ENSUPAG00010009722) #31	SLC1A5 (ENSUPAG00010009701) #32	STRN4 (ENSUPAG00010009670) #33	PRKD2 (ENSUPAG00010009657) #34
Alpin marmot	MODERN SPECIES	45	ENSMMMG00000012846 #12	ENSMMMG00000012847 #12	ENSMMMG00000012878 #12	ENSMMMG00000013050 #12	ENSMMMG00000013103	ENSMMMG00000013119 #12	CRX (ENSMMMG00000013129) #13	SELENOW (ENSMMMG00000013140) #14	ENSMMMG00000013145 #15	EHD2 (ENSMMMG00000013147) #16	BICRA (ENSMMMG00000013156) #17	ZNF541 (ENSMMMG00000013251) #18	NAPA (ENSMMMG00000013273) #19	KPTN (ENSMMMG00000013277) #20	SLC8A2 (ENSMMMG00000013339) #21	MEIS3 (ENSMMMG00000013369) #22	DHX34 (ENSMMMG00000013402) #23	C5AR2 (ENSMMMG00000013488) ##24	C5AR1 (ENSMMMG00000013493) #24	CCDC9 (ENSMMMG00000013499) #25	SAE1 (ENSMMMG00000013566) #27	ZC3H4 (ENSMMMG00000013587) #28	ENSMMMG00000013602	NPAS1 (ENSMMMG00000013606) #29	ARHGAP35 (ENSMMMG00000013646) #30	AP2S1 (ENSMMMG00000013659) #31	SLC1A5 (ENSMMMG00000013678) #32	FKRP (ENSMMMG00000013696)	STRN4 (ENSMMMG00000013698) #33	PRKD2 (ENSMMMG00000013741) #34	ENSMMMG00000013782 #35
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005015636 #12	ENSSVLG00005015448 #12	ENSSVLG00005014930 #12	ENSSVLG00005014859	ENSSVLG00005014702 #12	ENSSVLG00005014636	CRX (ENSSVLG00005014575) #13	SELENOW (ENSSVLG00005014510) #14	NOP53 (ENSSVLG00005014437) #15	EHD2 (ENSSVLG00005014364) #16	BICRA (ENSSVLG00005013976) #17	ZNF541 (ENSSVLG00005013491) #18	NAPA (ENSSVLG00005012991) #19	KPTN (ENSSVLG00005012899) #20	SLC8A2 (ENSSVLG00005012674) #21	MEIS3 (ENSSVLG00005012542) #22	DHX34 (ENSSVLG00005012498) #23	C5AR2 (ENSSVLG00005012478) ##24	C5AR1 (ENSSVLG00005012437) #24	ENSSVLG00005012324	CCDC9 (ENSSVLG00005012213) #25	BBC3 (ENSSVLG00005012098)	SAE1 (ENSSVLG00005011951) #27	ZC3H4 (ENSSVLG00005011727) #28	TMEM160 (ENSSVLG00005011672)	NPAS1 (ENSSVLG00005011606) #29	ARHGAP35 (ENSSVLG00005011555) #30	AP2S1 (ENSSVLG00005011272) #31	ENSSVLG00005011219	SLC1A5 (ENSSVLG00005010966) #32	FKRP (ENSSVLG00005010926)
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000162766 #11	ENSGT00940000163805	ENSGT00940000154432.m.a.b #12	ENSGT00940000154432.m.a.a #12	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34
Hystricomorpha_a	ANCESTRAL SPECIES	39							ENSGT00940000154432.m.a.a #12	ENSGT00940000161634 #13	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00940000167173	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33
Guinea pig	MODERN SPECIES	80					Std1 (ENSCPOG00000003036) #12	Std2 (ENSCPOG00000034234) #12	ENSCPOG00000034667 #12	CRX (ENSCPOG00000036687) #13	NOP53 (ENSCPOG00000015665) #15	EHD2 (ENSCPOG00000026417) #16	BICRA (ENSCPOG00000015610) #17	ZNF541 (ENSCPOG00000020622) #18	NAPA (ENSCPOG00000010617) #19	KPTN (ENSCPOG00000010615) #20	SLC8A2 (ENSCPOG00000010035) #21	MEIS3 (ENSCPOG00000026589) #22	DHX34 (ENSCPOG00000006510) #23	C5AR2 (ENSCPOG00000010536) ##24	C5AR1 (ENSCPOG00000030913) #24	INAFM1 (ENSCPOG00000034661)	ENSCPOG00000008209	SAE1 (ENSCPOG00000021581) #27	ZC3H4 (ENSCPOG00000036659) #28	TMEM160 (ENSCPOG00000015280)	NPAS1 (ENSCPOG00000023069) #29	ARHGAP35 (ENSCPOG00000013236) #30	AP2S1 (ENSCPOG00000026801) #31	SLC1A5 (ENSCPOG00000004326) #32	FKRP (ENSCPOG00000036590)	STRN4 (ENSCPOG00000001053) #33	PRKD2 (ENSCPOG00000003294) #34
Hystricomorpha_b	ANCESTRAL SPECIES	49								ENSGT00940000161634 #13	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00940000167173	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863	ENSGT00940000161295 #29	ENSGT01030000234635.a.b.a.b.b.a.b #30	ENSGT00970000193421.A #31	ENSGT00940000159485 #32	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #33	ENSGT00950000183024.a.b.b #34	ENSGT00950000183181.B.b #35
Long-tailed chinchilla	MODERN SPECIES	281								CRX (ENSCLAG00000001963) #13	NOP53 (ENSCLAG00000001860) #15	EHD2 (ENSCLAG00000001756) #16	BICRA (ENSCLAG00000000673) #17	ZNF541 (ENSCLAG00000001489) #18	NAPA (ENSCLAG00000001379) #19	KPTN (ENSCLAG00000001346) #20	SLC8A2 (ENSCLAG00000000972) #21	MEIS3 (ENSCLAG00000000719) #22	DHX34 (ENSCLAG00000000906) #23	C5AR1 (ENSCLAG00000001064) #24	ENSCLAG00000000680	BBC3 (ENSCLAG00000000578)	SAE1 (ENSCLAG00000000507) #27	ENSCLAG00000000483	ZC3H4 (ENSCLAG00000001032) #28	TMEM160 (ENSCLAG00000000918)	NPAS1 (ENSCLAG00000000717) #29	ARHGAP35 (ENSCLAG00000002385) #30	AP2S1 (ENSCLAG00000002250) #31	ENSCLAG00000002077 #32	FKRP (ENSCLAG00000001845)	STRN4 (ENSCLAG00000001542) #33	PRKD2 (ENSCLAG00000001395) #34
Degu	MODERN SPECIES	238								CRX (ENSODEG00000006452) #13	NOP53 (ENSODEG00000006707) #15	EHD2 (ENSODEG00000006641) #16	BICRA (ENSODEG00000009243) #17	ZNF541 (ENSODEG00000005850) #18	NAPA (ENSODEG00000008511) #19	ENSODEG00000009127 #20	SLC8A2 (ENSODEG00000007313) #21	MEIS3 (ENSODEG00000006485) #22	DHX34 (ENSODEG00000006333) #23	ENSODEG00000008542	ENSODEG00000009476	BBC3 (ENSODEG00000006470)	ENSODEG00000006581 #27	ZC3H4 (ENSODEG00000008320) #28	TMEM160 (ENSODEG00000009538)	NPAS1 (ENSODEG00000006878) #29	ARHGAP35 (ENSODEG00000007178) #30	AP2S1 (ENSODEG00000006649) #31	SLC1A5 (ENSODEG00000007341) #32	FKRP (ENSODEG00000019605)	STRN4 (ENSODEG00000009103) #33	PRKD2 (ENSODEG00000006559) #34	ENSODEG00000006767 #35
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000015393 #10	ELSPBP1 (ENSHGLG00000015441) #11	ENSHGLG00000015622	ENSHGLG00000018150 #12	SULT2A1 (ENSHGLG00000013462) #12	ENSHGLG00000034800	ENSHGLG00000048960 #12	CRX (ENSHGLG00000013944) #13	ENSHGLG00000037909 #14	NOP53 (ENSHGLG00000018240) #15	EHD2 (ENSHGLG00000017825) #16	ZNF541 (ENSHGLG00000017589) #18	NAPA (ENSHGLG00000017294) #19	KPTN (ENSHGLG00000013757) #20	SLC8A2 (ENSHGLG00000017722) #21	MEIS3 (ENSHGLG00000018600) #22	DHX34 (ENSHGLG00000004917) #23	C5AR2 (ENSHGLG00000045362) ##24	C5AR1 (ENSHGLG00000005545) #24	CCDC9 (ENSHGLG00000006240) #25	BBC3 (ENSHGLG00000050947)	SAE1 (ENSHGLG00000007950) #27	ZC3H4 (ENSHGLG00000008600) #28	TMEM160 (ENSHGLG00000009284)	NPAS1 (ENSHGLG00000009357) #29	ARHGAP35 (ENSHGLG00000010970) #30	AP2S1 (ENSHGLG00000018471) #31	SLC1A5 (ENSHGLG00000013744) #32	FKRP (ENSHGLG00000017783)	STRN4 (ENSHGLG00000015771) #33	PRKD2 (ENSHGLG00000017425) #34