Eutheria	ANCESTRAL SPECIES	29	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000166546	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Glires	ANCESTRAL SPECIES	6	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432.n	ENSGT00940000163805	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00940000157783	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00940000167173 #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583
Kangaroo rat	MODERN SPECIES	475								Crx (ENSDORG00000027827) #14	ENSDORG00000016339 #15	Ehd2 (ENSDORG00000011700) #16	Bicra (ENSDORG00000025123) #17	Zfp541 (ENSDORG00000028161) #18	Napa (ENSDORG00000009995) #19	ENSDORG00000009993 #20	Slc8a2 (ENSDORG00000009991) #21	Meis3 (ENSDORG00000008441) #22	Dhx34 (ENSDORG00000008437) #23	C5ar1 (ENSDORG00000030050) #24	ENSDORG00000024050 #25	ENSDORG00000029325 #26	Sae1 (ENSDORG00000012199) #27	Zc3h4 (ENSDORG00000002726) #28	Tmem160 (ENSDORG00000002725) #29	Npas1 (ENSDORG00000002722) #30	Arhgap35 (ENSDORG00000001800) #31	Ap2s1 (ENSDORG00000015282) #32	Slc1a5 (ENSDORG00000008810) #33	Strn4 (ENSDORG00000005407) #34	Prkd2 (ENSDORG00000005405) #35	ENSDORG00000005404 #36	Gng8 (ENSDORG00000005403) #37
Myomorpha	ANCESTRAL SPECIES	20	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.b	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Muroidea	ANCESTRAL SPECIES	18	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.b	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000157783	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a.c	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #32
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000157783	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a.c	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #32
Mus	ANCESTRAL SPECIES		ENSGT00940000157783	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a.c	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #32
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.m.a.c.c	ENSGT00390000000605.B.a	ENSGT00940000161634 #14	ENSGT00800000124482	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #32
Mus_B	ANCESTRAL SPECIES		ENSGT00940000154432.m.a.c.c.b	ENSGT00940000154432.m.a.c.d	ENSGT00390000000605.A	ENSGT00940000154432.m.b	ENSGT00390000000605.B.a.a	ENSGT00940000161634 #14	ENSGT00800000124482.b.a	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #32
Mouse	MODERN SPECIES	16	Obox7 (ENSMUSG00000055942)	Obox2 (ENSMUSG00000074369)	Obox1 (ENSMUSG00000054310)	Obox3 (ENSMUSG00000066772)	Obox5 (ENSMUSG00000074366)	Obox6 (ENSMUSG00000041583)	Crx (ENSMUSG00000041578) #14	Selenow (ENSMUSG00000041571)	Nop53 (ENSMUSG00000041560) #15	Ehd2 (ENSMUSG00000074364) #16	Bicra (ENSMUSG00000070808) #17	Zfp541 (ENSMUSG00000078796) #18	Napa (ENSMUSG00000006024) #19	Kptn (ENSMUSG00000006021) #20	Slc8a2 (ENSMUSG00000030376) #21	Meis3 (ENSMUSG00000041420) #22	Dhx34 (ENSMUSG00000006019) #23	C5ar2 (ENSMUSG00000074361) ##24	C5ar1 (ENSMUSG00000049130) #24	Inafm1 (ENSMUSG00000091811)	Ccdc9 (ENSMUSG00000041375)	Bbc3 (ENSMUSG00000002083)	Sae1 (ENSMUSG00000052833) #27	Zc3h4 (ENSMUSG00000059273) #28	Tmem160 (ENSMUSG00000019158) #29	Npas1 (ENSMUSG00000001988) #30	Arhgap35 (ENSMUSG00000058230) #31	Ceacam15 (ENSMUSG00000078795)	Ceacam9 (ENSMUSG00000007209)	Ap2s1 (ENSMUSG00000008036) #32	Slc1a5 (ENSMUSG00000001918) #33
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000154432.m.a.c.d	ENSGT00390000000605.A	ENSGT00940000154432.m.b	ENSGT01030000234553.b.b.c.a.a.b.b.a.b.b	ENSGT00390000000605.B.a.a	ENSGT00940000161634 #14	ENSGT00800000124482.b.a	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.c	ENSGT00970000193421.A #32
Steppe mouse	MODERN SPECIES	2772					Obox6 (ENSMSIG00000018548)	Crx (ENSMSIG00000018526) #14	ENSMSIG00000018513	Selenow (ENSMSIG00000018481)	Nop53 (ENSMSIG00000018430) #15	Ehd2 (ENSMSIG00000018416) #16	Bicra (ENSMSIG00000018350) #17	Zfp541 (ENSMSIG00000018222) #18	Napa (ENSMSIG00000018190) #19	Kptn (ENSMSIG00000018154) #20	Slc8a2 (ENSMSIG00000018129) #21	Meis3 (ENSMSIG00000018072) #22	Dhx34 (ENSMSIG00000017946) #23	C5ar2 (ENSMSIG00000017934) ##24	C5ar1 (ENSMSIG00000017926) #24	Ccdc9 (ENSMSIG00000017868)	ENSMSIG00000017856	Sae1 (ENSMSIG00000017811) #27	Zc3h4 (ENSMSIG00000017751) #28	Tmem160 (ENSMSIG00000017740) #29	Npas1 (ENSMSIG00000017698) #30	Arhgap35 (ENSMSIG00000017677) #31	ENSMSIG00000017666	Ceacam15 (ENSMSIG00000017658)	ENSMSIG00000017649	ENSMSIG00000017638 #32
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0029210	Obox8 (MGP_CAROLIEiJ_G0029211)	Sult2a8 (MGP_CAROLIEiJ_G0029212)	MGP_CAROLIEiJ_G0029213	Obox6 (MGP_CAROLIEiJ_G0029214)	Crx (MGP_CAROLIEiJ_G0029215) #14	MGP_CAROLIEiJ_G0029216	MGP_CAROLIEiJ_G0029217	Nop53 (MGP_CAROLIEiJ_G0029218) #15	Ehd2 (MGP_CAROLIEiJ_G0029219) #16	Bicra (MGP_CAROLIEiJ_G0029220) #17	Zfp541 (MGP_CAROLIEiJ_G0029221) #18	Napa (MGP_CAROLIEiJ_G0029222) #19	Kptn (MGP_CAROLIEiJ_G0029223) #20	Slc8a2 (MGP_CAROLIEiJ_G0029224) #21	Meis3 (MGP_CAROLIEiJ_G0029225) #22	Dhx34 (MGP_CAROLIEiJ_G0029226) #23	C5ar2 (MGP_CAROLIEiJ_G0029227) ##24	C5ar1 (MGP_CAROLIEiJ_G0029228) #24	Inafm1 (MGP_CAROLIEiJ_G0029229)	Ccdc9 (MGP_CAROLIEiJ_G0029230)	Bbc3 (MGP_CAROLIEiJ_G0029231)	Sae1 (MGP_CAROLIEiJ_G0029232) #27	MGP_CAROLIEiJ_G0029233 #28	Tmem160 (MGP_CAROLIEiJ_G0029234) #29	Npas1 (MGP_CAROLIEiJ_G0029235) #30	Arhgap35 (MGP_CAROLIEiJ_G0029236) #31	Ceacam15 (MGP_CAROLIEiJ_G0029237)	Ceacam9 (MGP_CAROLIEiJ_G0029238)	Ap2s1 (MGP_CAROLIEiJ_G0029239) #32	Slc1a5 (MGP_CAROLIEiJ_G0029240) #33
Shrew mouse	MODERN SPECIES	10	Zswim9 (MGP_PahariEiJ_G0021066)	Lig1 (MGP_PahariEiJ_G0021067)	Pla2g4c (MGP_PahariEiJ_G0021068)	Cabp5 (MGP_PahariEiJ_G0021069)	Bsph1 (MGP_PahariEiJ_G0021070)	MGP_PahariEiJ_G0021071	Crx (MGP_PahariEiJ_G0021072) #14	MGP_PahariEiJ_G0021073	MGP_PahariEiJ_G0021074 #15	Ehd2 (MGP_PahariEiJ_G0021075) #16	Bicra (MGP_PahariEiJ_G0021076) #17	Zfp541 (MGP_PahariEiJ_G0021077) #18	Napa (MGP_PahariEiJ_G0021078) #19	Kptn (MGP_PahariEiJ_G0021079) #20	Slc8a2 (MGP_PahariEiJ_G0021080) #21	Meis3 (MGP_PahariEiJ_G0021081) #22	Dhx34 (MGP_PahariEiJ_G0021082) #23	C5ar2 (MGP_PahariEiJ_G0021083) ##24	C5ar1 (MGP_PahariEiJ_G0021084) #24	Inafm1 (MGP_PahariEiJ_G0021085)	Ccdc9 (MGP_PahariEiJ_G0021086)	Bbc3 (MGP_PahariEiJ_G0021087)	Sae1 (MGP_PahariEiJ_G0021088) #27	Zc3h4 (MGP_PahariEiJ_G0021089) #28	Tmem160 (MGP_PahariEiJ_G0021090) #29	Npas1 (MGP_PahariEiJ_G0021091) #30	Arhgap35 (MGP_PahariEiJ_G0021092) #31	Ceacam15 (MGP_PahariEiJ_G0021093)	Ceacam9 (MGP_PahariEiJ_G0021094)	Ap2s1 (MGP_PahariEiJ_G0021095) #32	Slc1a5 (MGP_PahariEiJ_G0021096) #33
Rat	MODERN SPECIES		Sult2a2 (ENSRNOG00000062869)	ENSRNOG00000066824	AABR07002622.1 (ENSRNOG00000038276)	Obox1 (ENSRNOG00000066811)	Crx (ENSRNOG00000013890) #14	Crxos1 (ENSRNOG00000038251)	LOC100360843 (ENSRNOG00000033146)	LOC100364427 (ENSRNOG00000062534)	Rpl9 (ENSRNOG00000028449)	Nop53 (ENSRNOG00000013023) #15	Ehd2 (ENSRNOG00000011346) #16	Bicra (ENSRNOG00000011262) #17	Zfp541 (ENSRNOG00000021800) #18	Napa (ENSRNOG00000001494) #19	Slc8a2 (ENSRNOG00000001492) #21	Meis3 (ENSRNOG00000021390) #22	Dhx34 (ENSRNOG00000047575) #23	AABR07002627.1 (ENSRNOG00000060587)	C5ar2 (ENSRNOG00000049028) ##24	ENSRNOG00000066925	Inafm1 (ENSRNOG00000048848)	Bbc3 (ENSRNOG00000062473)	Sae1 (ENSRNOG00000015128) #27	Zc3h4 (ENSRNOG00000015229) #28	Tmem160 (ENSRNOG00000015304) #29	Npas1 (ENSRNOG00000015376) #30	Arhgap35 (ENSRNOG00000015852) #31	Gng5 (ENSRNOG00000063636)	LOC102550403 (ENSRNOG00000065825)	LOC108349752 (ENSRNOG00000028617)	Ceacam9 (ENSRNOG00000046915)
Cricetidae	ANCESTRAL SPECIES	29								ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #32
Cricetidae_B	ANCESTRAL SPECIES	60								ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.a	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F	ENSGT00970000193421.A #32
Northern American deer mouse	MODERN SPECIES		Ethe1 (ENSPEMG00000023092)	Phldb3 (ENSPEMG00000022660)	Lypd3 (ENSPEMG00000021920)	Tex101 (ENSPEMG00000021573)	Cd177 (ENSPEMG00000022001)	ENSPEMG00000027693	ENSPEMG00000031382	Selenow (ENSPEMG00000005090)	Nop53 (ENSPEMG00000006856) #15	Ehd2 (ENSPEMG00000024916) #16	Bicra (ENSPEMG00000008834) #17	Zfp541 (ENSPEMG00000015026) #18	Napa (ENSPEMG00000009721) #19	Kptn (ENSPEMG00000000792) #20	Slc8a2 (ENSPEMG00000002691) #21	Meis3 (ENSPEMG00000005978) #22	Dhx34 (ENSPEMG00000017613) #23	C5ar2 (ENSPEMG00000010321) ##24	C5ar1 (ENSPEMG00000001838) #24	Inafm1 (ENSPEMG00000009541)	Ccdc9 (ENSPEMG00000015166)	Bbc3 (ENSPEMG00000014228)	Sae1 (ENSPEMG00000012499) #27	Zc3h4 (ENSPEMG00000009762) #28	Tmem160 (ENSPEMG00000012479) #29	Npas1 (ENSPEMG00000014696) #30	Arhgap35 (ENSPEMG00000017349) #31	ENSPEMG00000031358	Ceacam15 (ENSPEMG00000016683)	ENSPEMG00000008534	Ceacam9 (ENSPEMG00000003127)
Prairie vole	MODERN SPECIES	354	Slc27a5 (ENSMOCG00000004298)	Zbtb45 (ENSMOCG00000001388)	Trim28 (ENSMOCG00000015909)	Chmp2a (ENSMOCG00000003404)	Ube2m (ENSMOCG00000016295)	Mzf1 (ENSMOCG00000011386)	Crx (ENSMOCG00000020933) #14	ENSMOCG00000017884	Nop53 (ENSMOCG00000008367) #15	Ehd2 (ENSMOCG00000007010) #16	Bicra (ENSMOCG00000019348) #17	Zfp541 (ENSMOCG00000021811) #18	Napa (ENSMOCG00000006244) #19	ENSMOCG00000013711 #20	Slc8a2 (ENSMOCG00000005717) #21	Meis3 (ENSMOCG00000008970) #22	Dhx34 (ENSMOCG00000016843) #23	C5ar2 (ENSMOCG00000004764) ##24	Ccdc9 (ENSMOCG00000020124)	Bbc3 (ENSMOCG00000017283)	ENSMOCG00000016346 #27	Zc3h4 (ENSMOCG00000006492) #28	Tmem160 (ENSMOCG00000016966) #29	Npas1 (ENSMOCG00000014578) #30	Arhgap35 (ENSMOCG00000015867) #31	Ceacam9 (ENSMOCG00000018285)	Ap2s1 (ENSMOCG00000019574) #32	Slc1a5 (ENSMOCG00000009762) #33	Fkrp (ENSMOCG00000022172)	Strn4 (ENSMOCG00000000602) #34	Prkd2 (ENSMOCG00000004684) #35
Cricetinae	ANCESTRAL SPECIES	49								ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT01100000263479.D.a.d.a.b	ENSGT01100000263479.F.a	ENSGT00970000193421.A #32	ENSGT00940000159485 #33
Chinese hamster chok1gshd	MODERN SPECIES	341								ENSCGRG00001019284	Nop53 (ENSCGRG00001019033) #15	Ehd2 (ENSCGRG00001018635) #16	Bicra (ENSCGRG00001017944) #17	Zfp541 (ENSCGRG00001016947) #18	Napa (ENSCGRG00001004279) #19	Kptn (ENSCGRG00001017146) #20	Slc8a2 (ENSCGRG00001013525) #21	Meis3 (ENSCGRG00001010748) #22	ENSCGRG00001017077 #23	Dhx34 (ENSCGRG00001014694) #23	C5ar2 (ENSCGRG00001013288) ##24	C5ar1 (ENSCGRG00001012882) #24	Inafm1 (ENSCGRG00001010104)	Ccdc9 (ENSCGRG00001007536)	Bbc3 (ENSCGRG00001017224)	Sae1 (ENSCGRG00001016314) #27	Zc3h4 (ENSCGRG00001016116) #28	Tmem160 (ENSCGRG00001014723) #29	Npas1 (ENSCGRG00001013611) #30	Arhgap35 (ENSCGRG00001013301) #31	Ceacam15 (ENSCGRG00001017353)	Ceacam9 (ENSCGRG00001017245)	Ap2s1 (ENSCGRG00001015937) #32
Golden Hamster	MODERN SPECIES	836								Selenow (ENSMAUG00000014624)	Nop53 (ENSMAUG00000012617) #15	Ehd2 (ENSMAUG00000010317) #16	Bicra (ENSMAUG00000015992) #17	Zfp541 (ENSMAUG00000012586) #18	Napa (ENSMAUG00000008333) #19	ENSMAUG00000000883 #20	Slc8a2 (ENSMAUG00000010121) #21	Meis3 (ENSMAUG00000014202) #22	Dhx34 (ENSMAUG00000013394) #23	C5ar2 (ENSMAUG00000006533) ##24	C5ar1 (ENSMAUG00000003322) #24	ENSMAUG00000003963	Bbc3 (ENSMAUG00000009202)	Sae1 (ENSMAUG00000007765) #27	ENSMAUG00000000957	Zc3h4 (ENSMAUG00000000068) #28	Tmem160 (ENSMAUG00000000893) #29	Npas1 (ENSMAUG00000001894) #30	Arhgap35 (ENSMAUG00000000172) #31	ENSMAUG00000009227	ENSMAUG00000008055	Ap2s1 (ENSMAUG00000019505) #32	Slc1a5 (ENSMAUG00000017083) #33
Upper Galilee mountains blind mole rat	MODERN SPECIES	501								Selenow (ENSNGAG00000001219)	Nop53 (ENSNGAG00000019894) #15	Ehd2 (ENSNGAG00000018699) #16	Bicra (ENSNGAG00000012259) #17	Zfp541 (ENSNGAG00000022695) #18	Napa (ENSNGAG00000000817) #19	ENSNGAG00000023937 #20	Slc8a2 (ENSNGAG00000011676) #21	Meis3 (ENSNGAG00000018810) #22	Dhx34 (ENSNGAG00000012974) #23	C5ar2 (ENSNGAG00000010859) ##24	C5ar1 (ENSNGAG00000009652) #24	ENSNGAG00000007282 #25	Bbc3 (ENSNGAG00000004788)	ENSNGAG00000001209 #27	Zc3h4 (ENSNGAG00000020090) #28	Tmem160 (ENSNGAG00000019488) #29	Npas1 (ENSNGAG00000018097) #30	Arhgap35 (ENSNGAG00000016819) #31	Hif3a (ENSNGAG00000014207)	Ppp5c (ENSNGAG00000012794)	Pnma8a (ENSNGAG00000008259)	Pnma8b (ENSNGAG00000008913)	ENSNGAG00000004089
Lesser Egyptian jerboa	MODERN SPECIES	257					ENSJJAG00000011866	Plekhf2 (ENSJJAG00000011954)	Crx (ENSJJAG00000014071) #14	Selenow (ENSJJAG00000007708)	Nop53 (ENSJJAG00000007854) #15	Ehd2 (ENSJJAG00000008621) #16	Bicra (ENSJJAG00000008900) #17	Zfp541 (ENSJJAG00000010932) #18	Napa (ENSJJAG00000011931) #19	ENSJJAG00000012597 #20	Slc8a2 (ENSJJAG00000013489) #21	Meis3 (ENSJJAG00000013989) #22	ENSJJAG00000013190
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432.n	ENSGT00940000163805	ENSGT00940000154432.m.a	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Sciuridae	ANCESTRAL SPECIES	5			ENSGT00940000163805	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432.n	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a.j #34
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000154432.n.h.a.b.a.b.a	ENSGT00940000163003	ENSGT00940000154432.n.h.a.b.b	ENSGT00940000154432.n.h.a.a	ENSGT00940000163805	ENSGT00940000154432.n.g	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a.j #34
Marmotini_b	ANCESTRAL SPECIES	22	ENSGT00940000154432.n.h.a.b.a.b.a	ENSGT00940000154432.n.h.a.b.a.a	ENSGT00940000163003	ENSGT00940000154432.n.h.a.b.b	ENSGT00940000154432.n.h.a.a	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a.j #34
Squirrel	MODERN SPECIES	264	ENSSTOG00000020452	ENSSTOG00000023396	ENSSTOG00000020676	BSPH1 (ENSSTOG00000034649)	ENSSTOG00000025647	ENSSTOG00000022010	ENSSTOG00000021552	CRX (ENSSTOG00000024356) #14	NOP53 (ENSSTOG00000022092) #15	ENSSTOG00000011087 #16	BICRA (ENSSTOG00000028398) #17	ZNF541 (ENSSTOG00000026879) #18	NAPA (ENSSTOG00000006983) #19	KPTN (ENSSTOG00000006963) #20	SLC8A2 (ENSSTOG00000020165) #21	MEIS3 (ENSSTOG00000028182) #22	DHX34 (ENSSTOG00000015831) #23	C5AR2 (ENSSTOG00000023346) ##24	C5AR1 (ENSSTOG00000026678) #24	ENSSTOG00000005813	SAE1 (ENSSTOG00000016251) #27	ZC3H4 (ENSSTOG00000016249) #28	TMEM160 (ENSSTOG00000024623) #29	NPAS1 (ENSSTOG00000003396) #30	ARHGAP35 (ENSSTOG00000011409) #31	SLC1A5 (ENSSTOG00000028576) #33	FKRP (ENSSTOG00000027896)	STRN4 (ENSSTOG00000025660) #34	PRKD2 (ENSSTOG00000026693) #35	ENSSTOG00000028905 #36	GNG8 (ENSSTOG00000024152) #37
Arctic ground squirrel	MODERN SPECIES	455							CRX (ENSUPAG00010010106) #14	ENSUPAG00010010102	NOP53 (ENSUPAG00010010094) #15	EHD2 (ENSUPAG00010010085) #16	BICRA (ENSUPAG00010010059) #17	ZNF541 (ENSUPAG00010010048) #18	NAPA (ENSUPAG00010010015) #19	KPTN (ENSUPAG00010010006) #20	SLC8A2 (ENSUPAG00010009969) #21	MEIS3 (ENSUPAG00010009940) #22	DHX34 (ENSUPAG00010009871) #23	C5AR2 (ENSUPAG00010009867) ##24	C5AR1 (ENSUPAG00010009863) #24	INAFM1 (ENSUPAG00010009857)	CCDC9 (ENSUPAG00010009846)	BBC3 (ENSUPAG00010009844)	SAE1 (ENSUPAG00010009824) #27	ZC3H4 (ENSUPAG00010009793) #28	TMEM160 (ENSUPAG00010009790) #29	NPAS1 (ENSUPAG00010009764) #30	ARHGAP35 (ENSUPAG00010009739) #31	AP2S1 (ENSUPAG00010009722) #32	SLC1A5 (ENSUPAG00010009701) #33	STRN4 (ENSUPAG00010009670) #34	PRKD2 (ENSUPAG00010009657) #35
Alpin marmot	MODERN SPECIES	45	ENSMMMG00000012846	ENSMMMG00000012847	ENSMMMG00000012878	ENSMMMG00000013050	ENSMMMG00000013103	ENSMMMG00000013119	CRX (ENSMMMG00000013129) #14	SELENOW (ENSMMMG00000013140)	ENSMMMG00000013145 #15	EHD2 (ENSMMMG00000013147) #16	BICRA (ENSMMMG00000013156) #17	ZNF541 (ENSMMMG00000013251) #18	NAPA (ENSMMMG00000013273) #19	KPTN (ENSMMMG00000013277) #20	SLC8A2 (ENSMMMG00000013339) #21	MEIS3 (ENSMMMG00000013369) #22	DHX34 (ENSMMMG00000013402) #23	C5AR2 (ENSMMMG00000013488) ##24	C5AR1 (ENSMMMG00000013493) #24	CCDC9 (ENSMMMG00000013499)	SAE1 (ENSMMMG00000013566) #27	ZC3H4 (ENSMMMG00000013587) #28	ENSMMMG00000013602	NPAS1 (ENSMMMG00000013606) #30	ARHGAP35 (ENSMMMG00000013646) #31	AP2S1 (ENSMMMG00000013659) #32	SLC1A5 (ENSMMMG00000013678) #33	FKRP (ENSMMMG00000013696)	STRN4 (ENSMMMG00000013698) #34	PRKD2 (ENSMMMG00000013741) #35	ENSMMMG00000013782 #36
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005015636	ENSSVLG00005015448	ENSSVLG00005014930	ENSSVLG00005014859	ENSSVLG00005014702	ENSSVLG00005014636	CRX (ENSSVLG00005014575) #14	SELENOW (ENSSVLG00005014510)	NOP53 (ENSSVLG00005014437) #15	EHD2 (ENSSVLG00005014364) #16	BICRA (ENSSVLG00005013976) #17	ZNF541 (ENSSVLG00005013491) #18	NAPA (ENSSVLG00005012991) #19	KPTN (ENSSVLG00005012899) #20	SLC8A2 (ENSSVLG00005012674) #21	MEIS3 (ENSSVLG00005012542) #22	DHX34 (ENSSVLG00005012498) #23	C5AR2 (ENSSVLG00005012478) ##24	C5AR1 (ENSSVLG00005012437) #24	ENSSVLG00005012324	CCDC9 (ENSSVLG00005012213)	BBC3 (ENSSVLG00005012098)	SAE1 (ENSSVLG00005011951) #27	ZC3H4 (ENSSVLG00005011727) #28	TMEM160 (ENSSVLG00005011672) #29	NPAS1 (ENSSVLG00005011606) #30	ARHGAP35 (ENSSVLG00005011555) #31	AP2S1 (ENSSVLG00005011272) #32	ENSSVLG00005011219	SLC1A5 (ENSSVLG00005010966) #33	FKRP (ENSSVLG00005010926)
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163805	ENSGT00940000154432.m.a.b	ENSGT00940000154432.m.a.a	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Hystricomorpha_a	ANCESTRAL SPECIES	39							ENSGT00940000154432.m.a.a	ENSGT00940000161634 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00940000167173 #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Guinea pig	MODERN SPECIES	80					Std1 (ENSCPOG00000003036)	Std2 (ENSCPOG00000034234)	ENSCPOG00000034667	CRX (ENSCPOG00000036687) #14	NOP53 (ENSCPOG00000015665) #15	EHD2 (ENSCPOG00000026417) #16	BICRA (ENSCPOG00000015610) #17	ZNF541 (ENSCPOG00000020622) #18	NAPA (ENSCPOG00000010617) #19	KPTN (ENSCPOG00000010615) #20	SLC8A2 (ENSCPOG00000010035) #21	MEIS3 (ENSCPOG00000026589) #22	DHX34 (ENSCPOG00000006510) #23	C5AR2 (ENSCPOG00000010536) ##24	C5AR1 (ENSCPOG00000030913) #24	INAFM1 (ENSCPOG00000034661)	ENSCPOG00000008209 #25	SAE1 (ENSCPOG00000021581) #27	ZC3H4 (ENSCPOG00000036659) #28	TMEM160 (ENSCPOG00000015280) #29	NPAS1 (ENSCPOG00000023069) #30	ARHGAP35 (ENSCPOG00000013236) #31	AP2S1 (ENSCPOG00000026801) #32	SLC1A5 (ENSCPOG00000004326) #33	FKRP (ENSCPOG00000036590)	STRN4 (ENSCPOG00000001053) #34	PRKD2 (ENSCPOG00000003294) #35
Hystricomorpha_b	ANCESTRAL SPECIES	49								ENSGT00940000161634 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00940000167173 #25	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35	ENSGT00950000183181.B.b #36
Long-tailed chinchilla	MODERN SPECIES	281								CRX (ENSCLAG00000001963) #14	NOP53 (ENSCLAG00000001860) #15	EHD2 (ENSCLAG00000001756) #16	BICRA (ENSCLAG00000000673) #17	ZNF541 (ENSCLAG00000001489) #18	NAPA (ENSCLAG00000001379) #19	KPTN (ENSCLAG00000001346) #20	SLC8A2 (ENSCLAG00000000972) #21	MEIS3 (ENSCLAG00000000719) #22	DHX34 (ENSCLAG00000000906) #23	C5AR1 (ENSCLAG00000001064) #24	ENSCLAG00000000680 #25	BBC3 (ENSCLAG00000000578)	SAE1 (ENSCLAG00000000507) #27	ENSCLAG00000000483	ZC3H4 (ENSCLAG00000001032) #28	TMEM160 (ENSCLAG00000000918) #29	NPAS1 (ENSCLAG00000000717) #30	ARHGAP35 (ENSCLAG00000002385) #31	AP2S1 (ENSCLAG00000002250) #32	ENSCLAG00000002077 #33	FKRP (ENSCLAG00000001845)	STRN4 (ENSCLAG00000001542) #34	PRKD2 (ENSCLAG00000001395) #35
Degu	MODERN SPECIES	238								CRX (ENSODEG00000006452) #14	NOP53 (ENSODEG00000006707) #15	EHD2 (ENSODEG00000006641) #16	BICRA (ENSODEG00000009243) #17	ZNF541 (ENSODEG00000005850) #18	NAPA (ENSODEG00000008511) #19	ENSODEG00000009127 #20	SLC8A2 (ENSODEG00000007313) #21	MEIS3 (ENSODEG00000006485) #22	DHX34 (ENSODEG00000006333) #23	ENSODEG00000008542	ENSODEG00000009476 #25	BBC3 (ENSODEG00000006470)	ENSODEG00000006581 #27	ZC3H4 (ENSODEG00000008320) #28	TMEM160 (ENSODEG00000009538) #29	NPAS1 (ENSODEG00000006878) #30	ARHGAP35 (ENSODEG00000007178) #31	AP2S1 (ENSODEG00000006649) #32	SLC1A5 (ENSODEG00000007341) #33	FKRP (ENSODEG00000019605)	STRN4 (ENSODEG00000009103) #34	PRKD2 (ENSODEG00000006559) #35	ENSODEG00000006767 #36
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000015393	ELSPBP1 (ENSHGLG00000015441)	ENSHGLG00000015622	ENSHGLG00000018150	SULT2A1 (ENSHGLG00000013462)	ENSHGLG00000034800	ENSHGLG00000048960	CRX (ENSHGLG00000013944) #14	ENSHGLG00000037909	NOP53 (ENSHGLG00000018240) #15	EHD2 (ENSHGLG00000017825) #16	ZNF541 (ENSHGLG00000017589) #18	NAPA (ENSHGLG00000017294) #19	KPTN (ENSHGLG00000013757) #20	SLC8A2 (ENSHGLG00000017722) #21	MEIS3 (ENSHGLG00000018600) #22	DHX34 (ENSHGLG00000004917) #23	C5AR2 (ENSHGLG00000045362) ##24	C5AR1 (ENSHGLG00000005545) #24	CCDC9 (ENSHGLG00000006240)	BBC3 (ENSHGLG00000050947)	SAE1 (ENSHGLG00000007950) #27	ZC3H4 (ENSHGLG00000008600) #28	TMEM160 (ENSHGLG00000009284) #29	NPAS1 (ENSHGLG00000009357) #30	ARHGAP35 (ENSHGLG00000010970) #31	AP2S1 (ENSHGLG00000018471) #32	SLC1A5 (ENSHGLG00000013744) #33	FKRP (ENSHGLG00000017783)	STRN4 (ENSHGLG00000015771) #34	PRKD2 (ENSHGLG00000017425) #35
Lagomorpha	ANCESTRAL SPECIES	135												ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35	ENSGT00950000183181.B.b #36
Rabbit	MODERN SPECIES	568												ZNF541 (ENSOCUG00000000969) #18	NAPA (ENSOCUG00000000967) #19	KPTN (ENSOCUG00000024733) #20	ENSOCUG00000031820 #21	MEIS3 (ENSOCUG00000025760) #22	DHX34 (ENSOCUG00000014005) #23	C5AR2 (ENSOCUG00000025530) ##24	C5AR1 (ENSOCUG00000022167) #24	CCDC9 (ENSOCUG00000013560)	BBC3 (ENSOCUG00000037839)	SAE1 (ENSOCUG00000024320) #27	ZC3H4 (ENSOCUG00000026069) #28	TMEM160 (ENSOCUG00000023097) #29	NPAS1 (ENSOCUG00000016061) #30	ARHGAP35 (ENSOCUG00000017126) #31	ENSOCUG00000039332	SLC1A5 (ENSOCUG00000009144) #33	FKRP (ENSOCUG00000000122)	STRN4 (ENSOCUG00000021418) #34	PRKD2 (ENSOCUG00000026784) #35
Pika	MODERN SPECIES	1283																MEIS3 (ENSOPRG00000011915) #22	ENSOPRG00000011872 #23	ENSOPRG00000011863 ##24
Primates	ANCESTRAL SPECIES	15	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Tarsier	MODERN SPECIES	2205																MEIS3 (ENSTSYG00000028178) #22	DHX34 (ENSTSYG00000031168) #23
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069.e.b	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Platyrrhini	ANCESTRAL SPECIES	20	ENSGT00390000011694	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000154432.g	ENSGT00940000161634 #14	ENSGT00940000161069.e.b	ENSGT00940000161069.e.a	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000157783	ENSGT00390000011694	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000154432.g	ENSGT00940000161634 #14	ENSGT00940000161069.e.b	ENSGT00940000161069.e.a	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Marmoset	MODERN SPECIES	14	CARD8 (ENSCJAG00000000489)	LIG1 (ENSCJAG00000000504)	ENSCJAG00000076045	ENSCJAG00000071055	CABP5 (ENSCJAG00000008133)	SULT2A1 (ENSCJAG00000005269)	CRX (ENSCJAG00000078298) #14	SELENOW (ENSCJAG00000043185)	NOP53 (ENSCJAG00000011385) #15	EHD2 (ENSCJAG00000011415) #16	BICRA (ENSCJAG00000011418) #17	ZNF541 (ENSCJAG00000011435) #18	NAPA (ENSCJAG00000042205) #19	KPTN (ENSCJAG00000011460) #20	SLC8A2 (ENSCJAG00000070619) #21	MEIS3 (ENSCJAG00000011475) #22	DHX34 (ENSCJAG00000011504) #23	ENSCJAG00000072119	C5AR2 (ENSCJAG00000011534) ##24	C5AR1 (ENSCJAG00000073054) #24	INAFM1 (ENSCJAG00000074475)	CCDC9 (ENSCJAG00000011548)	ENSCJAG00000083080	SAE1 (ENSCJAG00000011565) #27	ZC3H4 (ENSCJAG00000011601) #28	TMEM160 (ENSCJAG00000082760) #29	NPAS1 (ENSCJAG00000076811) #30	ARHGAP35 (ENSCJAG00000011701) #31	ENSCJAG00000072578	ENSCJAG00000011710 #32	SLC1A5 (ENSCJAG00000011717) #33
Cebidae_a	ANCESTRAL SPECIES	20	ENSGT00830000128447	ENSGT00940000157783	ENSGT00390000011694	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000154432.g	ENSGT00940000161634 #14	ENSGT00940000161069.e.a	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35	ENSGT00950000183181.B.b #36
Capuchin	MODERN SPECIES	266	ENSCCAG00000030878	LIG1 (ENSCCAG00000022254)	ZSWIM9 (ENSCCAG00000022754)	CABP5 (ENSCCAG00000029328)	ENSCCAG00000027792	SULT2A1 (ENSCCAG00000020859)	CRX (ENSCCAG00000034793) #14	ENSCCAG00000024879	NOP53 (ENSCCAG00000025477) #15	EHD2 (ENSCCAG00000035777) #16	BICRA (ENSCCAG00000026467) #17	ZNF541 (ENSCCAG00000037140) #18	NAPA (ENSCCAG00000033321) #19	KPTN (ENSCCAG00000027753) #20	SLC8A2 (ENSCCAG00000014965) #21	MEIS3 (ENSCCAG00000003816) #22	DHX34 (ENSCCAG00000028675) #23	C5AR1 (ENSCCAG00000035091) #24	CCDC9 (ENSCCAG00000028908)	ENSCCAG00000026596	SAE1 (ENSCCAG00000031780) #27	ZC3H4 (ENSCCAG00000037597) #28	TMEM160 (ENSCCAG00000031011) #29	NPAS1 (ENSCCAG00000032406) #30	ENSCCAG00000021097	ARHGAP35 (ENSCCAG00000022601) #31	AP2S1 (ENSCCAG00000028431) #32	SLC1A5 (ENSCCAG00000033717) #33	FKRP (ENSCCAG00000015087)	STRN4 (ENSCCAG00000034066) #34	PRKD2 (ENSCCAG00000032043) #35
Mas night monkey	MODERN SPECIES	1284	LIG1 (ENSANAG00000025847)	ZSWIM9 (ENSANAG00000037000)	CABP5 (ENSANAG00000036055)	ELSPBP1 (ENSANAG00000021618)	SULT2A1 (ENSANAG00000008443)	CRX (ENSANAG00000036213) #14	ENSANAG00000038368	NOP53 (ENSANAG00000007933) #15	EHD2 (ENSANAG00000031077) #16	BICRA (ENSANAG00000021909) #17	ZNF541 (ENSANAG00000034121) #18	NAPA (ENSANAG00000029662) #19	KPTN (ENSANAG00000030248) #20	SLC8A2 (ENSANAG00000033218) #21	ENSANAG00000034504	MEIS3 (ENSANAG00000037100) #22	DHX34 (ENSANAG00000038287) #23	C5AR1 (ENSANAG00000031163) #24	INAFM1 (ENSANAG00000035853)	CCDC9 (ENSANAG00000020361)	ENSANAG00000037922	SAE1 (ENSANAG00000023379) #27	ZC3H4 (ENSANAG00000023963) #28	TMEM160 (ENSANAG00000026707) #29	NPAS1 (ENSANAG00000036771) #30	ARHGAP35 (ENSANAG00000000237) #31	ENSANAG00000022565	AP2S1 (ENSANAG00000024767) #32	SLC1A5 (ENSANAG00000021437) #33	FKRP (ENSANAG00000019314)	STRN4 (ENSANAG00000032421) #34
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.i.b #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007.i.b #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.i.b.b #27	ENSGT00550000075007.j #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007.i.b.a #27	ENSGT00390000002767	ENSGT00550000075007.j #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33
Macaca	ANCESTRAL SPECIES	12	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.j #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.a.d	ENSGT00940000157783	ENSGT01030000234606.a.b.d	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00390000017267.j #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.j #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Rhesus	MODERN SPECIES	10	PLA2G4C (ENSMMUG00000014293)	ELSPBP1 (ENSMMUG00000006857)	BSPH1 (ENSMMUG00000058643)	SULT2A1 (ENSMMUG00000056800)	ENSMMUG00000059253	CRX (ENSMMUG00000049999) #14	TPRX1 (ENSMMUG00000048019)	ENSMMUG00000061457	NOP53 (ENSMMUG00000013348) #15	EHD2 (ENSMMUG00000040121) #16	BICRA (ENSMMUG00000019356) #17	ZNF541 (ENSMMUG00000014729) #18	NAPA (ENSMMUG00000014727) #19	KPTN (ENSMMUG00000014723) #20	SLC8A2 (ENSMMUG00000014718) #21	MEIS3 (ENSMMUG00000013009) #22	DHX34 (ENSMMUG00000009275) #23	C5AR2 (ENSMMUG00000009277) ##24	C5AR1 (ENSMMUG00000009278) #24	CCDC9 (ENSMMUG00000003075)	ENSMMUG00000012466	ENSMMUG00000055893	SAE1 (ENSMMUG00000009506) #27	ZC3H4 (ENSMMUG00000014709) #28	TMEM160 (ENSMMUG00000057454) #29	NPAS1 (ENSMMUG00000011330) #30	ARHGAP35 (ENSMMUG00000011332) #31	AP2S1 (ENSMMUG00000000833) #32	SLC1A5 (ENSMMUG00000022163) #33	FKRP (ENSMMUG00000028743)	STRN4 (ENSMMUG00000017930) #34
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000061337	LIG1 (ENSMFAG00000010948)	PLA2G4C (ENSMFAG00000045458)	ENSMFAG00000035166	SULT2A1 (ENSMFAG00000046325)	ENSMFAG00000052649	CRX (ENSMFAG00000039279) #14	SELENOW (ENSMFAG00000057852)	ENSMFAG00000051508	NOP53 (ENSMFAG00000045103) #15	EHD2 (ENSMFAG00000045476) #16	ZNF541 (ENSMFAG00000008705) #18	NAPA (ENSMFAG00000000053) #19	KPTN (ENSMFAG00000039746) #20	SLC8A2 (ENSMFAG00000037527) #21	MEIS3 (ENSMFAG00000034069) #22	C5AR2 (ENSMFAG00000064310) ##24	C5AR1 (ENSMFAG00000064601) #24	CCDC9 (ENSMFAG00000002381)	BBC3 (ENSMFAG00000033464)	SAE1 (ENSMFAG00000046126) #27	ENSMFAG00000048737	ENSMFAG00000001653 #29	NPAS1 (ENSMFAG00000018045) #30	ARHGAP35 (ENSMFAG00000041192) #31	AP2S1 (ENSMFAG00000022670) #32	SLC1A5 (ENSMFAG00000044927) #33	STRN4 (ENSMFAG00000035843) #34	PRKD2 (ENSMFAG00000045883) #35	ENSMFAG00000030779 #36	ENSMFAG00000044510 #37
Pig-tailed macaque	MODERN SPECIES	551	PLA2G4C (ENSMNEG00000029999)	CABP5 (ENSMNEG00000029058)	ELSPBP1 (ENSMNEG00000027813)	BSPH1 (ENSMNEG00000029609)	SULT2A1 (ENSMNEG00000038830)	CRX (ENSMNEG00000032189) #14	TPRX1 (ENSMNEG00000041107)	SELENOW (ENSMNEG00000035729)	ENSMNEG00000042540 #15	EHD2 (ENSMNEG00000029528) #16	BICRA (ENSMNEG00000045550) #17	ZNF541 (ENSMNEG00000031984) #18	NAPA (ENSMNEG00000033334) #19	KPTN (ENSMNEG00000035130) #20	SLC8A2 (ENSMNEG00000032344) #21	MEIS3 (ENSMNEG00000045404) #22	DHX34 (ENSMNEG00000038649) #23	C5AR1 (ENSMNEG00000040235) #24	CCDC9 (ENSMNEG00000029240)	ENSMNEG00000009958	ENSMNEG00000024262 #27	ZC3H4 (ENSMNEG00000039406) #28	TMEM160 (ENSMNEG00000026327) #29	NPAS1 (ENSMNEG00000038438) #30	ARHGAP35 (ENSMNEG00000029940) #31	AP2S1 (ENSMNEG00000036216) #32	SLC1A5 (ENSMNEG00000040803) #33	FKRP (ENSMNEG00000013306)	STRN4 (ENSMNEG00000042544) #34	PRKD2 (ENSMNEG00000038676) #35	DACT3 (ENSMNEG00000005969) #36
Cercopithecinae_b	ANCESTRAL SPECIES	23	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007.i.b.a #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Cercopithecinae_d	ANCESTRAL SPECIES	9	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007.i.b.a #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35	ENSGT00950000183181.B.b #36
Sooty mangabey	MODERN SPECIES	228	PLA2G4C (ENSCATG00000014087)	CABP5 (ENSCATG00000038717)	ELSPBP1 (ENSCATG00000039398)	BSPH1 (ENSCATG00000035095)	SULT2A1 (ENSCATG00000030367)	CRX (ENSCATG00000042146) #14	TPRX1 (ENSCATG00000035099)	SELENOW (ENSCATG00000023895)	ENSCATG00000032842 #15	EHD2 (ENSCATG00000013287) #16	BICRA (ENSCATG00000043087) #17	ZNF541 (ENSCATG00000036460) #18	NAPA (ENSCATG00000039365) #19	KPTN (ENSCATG00000031555) #20	SLC8A2 (ENSCATG00000019815) #21	MEIS3 (ENSCATG00000044534) #22	DHX34 (ENSCATG00000032316) #23	C5AR1 (ENSCATG00000032999) #24	CCDC9 (ENSCATG00000023465)	ENSCATG00000044506	SAE1 (ENSCATG00000041175) #27	ZC3H4 (ENSCATG00000039046) #28	TMEM160 (ENSCATG00000017019) #29	NPAS1 (ENSCATG00000044490) #30	ARHGAP35 (ENSCATG00000025751) #31	AP2S1 (ENSCATG00000030501) #32	SLC1A5 (ENSCATG00000041986) #33	FKRP (ENSCATG00000015421)	STRN4 (ENSCATG00000041998) #34	PRKD2 (ENSCATG00000012657) #35	DACT3 (ENSCATG00000028958) #36
Drill	MODERN SPECIES	254	ENSMLEG00000013732	LIG1 (ENSMLEG00000024179)	PLA2G4C (ENSMLEG00000035538)	CABP5 (ENSMLEG00000029590)	ELSPBP1 (ENSMLEG00000044354)	SULT2A1 (ENSMLEG00000014855)	CRX (ENSMLEG00000010899) #14	SELENOW (ENSMLEG00000014481)	ENSMLEG00000032475 #15	EHD2 (ENSMLEG00000044265) #16	BICRA (ENSMLEG00000030433) #17	ZNF541 (ENSMLEG00000029328) #18	NAPA (ENSMLEG00000044028) #19	KPTN (ENSMLEG00000038643) #20	SLC8A2 (ENSMLEG00000041982) #21	MEIS3 (ENSMLEG00000034525) #22	DHX34 (ENSMLEG00000041860) #23	C5AR1 (ENSMLEG00000034392) #24	CCDC9 (ENSMLEG00000042193)	ENSMLEG00000038746	ENSMLEG00000042254 #27	ZC3H4 (ENSMLEG00000007946) #28	ENSMLEG00000038871 #30	ARHGAP35 (ENSMLEG00000042586) #31	AP2S1 (ENSMLEG00000034145) #32	SLC1A5 (ENSMLEG00000039768) #33	STRN4 (ENSMLEG00000039813) #34	PRKD2 (ENSMLEG00000041161) #35	ENSMLEG00000042860 #36	GNG8 (ENSMLEG00000041963) #37	PTGIR (ENSMLEG00000039111)
Vervet Monkey	MODERN SPECIES	25	LIG1 (ENSCSAG00000002897)	PLA2G4C (ENSCSAG00000002903)	CABP5 (ENSCSAG00000002905)	ELSPBP1 (ENSCSAG00000002911)	BSPH1 (ENSCSAG00000002916)	SULT2A1 (ENSCSAG00000002919)	CRX (ENSCSAG00000002921) #14	SELENOW (ENSCSAG00000002926)	ENSCSAG00000002928 #15	EHD2 (ENSCSAG00000002930) #16	BICRA (ENSCSAG00000002933) #17	ENSCSAG00000002936 #18	NAPA (ENSCSAG00000002939) #19	KPTN (ENSCSAG00000002944) #20	SLC8A2 (ENSCSAG00000002946) #21	MEIS3 (ENSCSAG00000002950) #22	DHX34 (ENSCSAG00000002965) #23	C5AR2 (ENSCSAG00000019638) ##24	C5AR1 (ENSCSAG00000002973) #24	ENSCSAG00000019637	CCDC9 (ENSCSAG00000002974)	BBC3 (ENSCSAG00000002981)	SAE1 (ENSCSAG00000002984) #27	ZC3H4 (ENSCSAG00000002989) #28	TMEM160 (ENSCSAG00000002993) #29	NPAS1 (ENSCSAG00000003006) #30	ARHGAP35 (ENSCSAG00000003015) #31	ENSCSAG00000019636	ENSCSAG00000003016 #33	FKRP (ENSCSAG00000019635)	STRN4 (ENSCSAG00000003022) #34
Rhinopithecus	ANCESTRAL SPECIES	16	ENSGT01030000234606.a.b.d	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007.i.b #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Black snub-nosed monkey	MODERN SPECIES	111	PLA2G4C (ENSRBIG00000031023)	CABP5 (ENSRBIG00000043674)	ELSPBP1 (ENSRBIG00000039740)	BSPH1 (ENSRBIG00000043547)	SULT2A1 (ENSRBIG00000035608)	ENSRBIG00000039568	TPRX1 (ENSRBIG00000031002)	SELENOW (ENSRBIG00000031185)	ENSRBIG00000036427 #15	EHD2 (ENSRBIG00000035965) #16	BICRA (ENSRBIG00000039397) #17	ZNF541 (ENSRBIG00000027044) #18	NAPA (ENSRBIG00000027994) #19	KPTN (ENSRBIG00000039197) #20	SLC8A2 (ENSRBIG00000030127) #21	MEIS3 (ENSRBIG00000027626) #22	DHX34 (ENSRBIG00000037382) #23	CCDC9 (ENSRBIG00000035248)	ENSRBIG00000031139	SAE1 (ENSRBIG00000037933) #27	ZC3H4 (ENSRBIG00000027984) #28	TMEM160 (ENSRBIG00000039420) #29	NPAS1 (ENSRBIG00000042290) #30	ENSRBIG00000034879	ENSRBIG00000029587	AACS (ENSRBIG00000039115)	BRI3BP (ENSRBIG00000032003)	DHX37 (ENSRBIG00000043457)	ENSRBIG00000028284	ENSRBIG00000023396	SCARB1 (ENSRBIG00000041753)
Golden snub-nosed monkey	MODERN SPECIES	2027	PLA2G4C (ENSRROG00000042138)	CABP5 (ENSRROG00000042418)	ELSPBP1 (ENSRROG00000042315)	BSPH1 (ENSRROG00000045761)	SULT2A1 (ENSRROG00000034211)	CRX (ENSRROG00000025759) #14	TPRX1 (ENSRROG00000043121)	SELENOW (ENSRROG00000030554)	ENSRROG00000042298 #15	EHD2 (ENSRROG00000043148) #16	BICRA (ENSRROG00000026604) #17	ZNF541 (ENSRROG00000044146) #18	NAPA (ENSRROG00000037389) #19	KPTN (ENSRROG00000036495) #20	SLC8A2 (ENSRROG00000045566) #21	MEIS3 (ENSRROG00000029017) #22	DHX34 (ENSRROG00000042872) #23	C5AR1 (ENSRROG00000034629) #24	INAFM1 (ENSRROG00000036821)	CCDC9 (ENSRROG00000025974)	ENSRROG00000040712	SAE1 (ENSRROG00000031746) #27	ZC3H4 (ENSRROG00000032920) #28	TMEM160 (ENSRROG00000043669) #29	NPAS1 (ENSRROG00000043828) #30	ARHGAP35 (ENSRROG00000035853) #31	AP2S1 (ENSRROG00000045451) #32	SLC1A5 (ENSRROG00000038480) #33	FKRP (ENSRROG00000007497)	STRN4 (ENSRROG00000042099) #34	PRKD2 (ENSRROG00000034944) #35
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00960000191916	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.a.a #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.i.b #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Gibbon	MODERN SPECIES	7	CATSPERD (ENSNLEG00000013718)	ENSNLEG00000013730	DUS3L (ENSNLEG00000013734)	NRTN (ENSNLEG00000013785)	ENSNLEG00000034850	ENSNLEG00000013795	ENSNLEG00000003385	ENSNLEG00000030217	ENSNLEG00000003143 #15	ENSNLEG00000034480 #16	ENSNLEG00000003119 #17	ENSNLEG00000034044 #18	ENSNLEG00000031845	KPTN (ENSNLEG00000003092) #20	ENSNLEG00000003082 #21	MEIS3 (ENSNLEG00000003031) #22	DHX34 (ENSNLEG00000003010) #23	C5AR1 (ENSNLEG00000018412) #24	INAFM1 (ENSNLEG00000018411)	CCDC9 (ENSNLEG00000002990)	ENSNLEG00000018410	ENSNLEG00000002975	SAE1 (ENSNLEG00000002965) #27	ZC3H4 (ENSNLEG00000034259) #28	TMEM160 (ENSNLEG00000002960) #29	NPAS1 (ENSNLEG00000002946) #30	ARHGAP35 (ENSNLEG00000002923) #31	AP2S1 (ENSNLEG00000002895) #32	ENSNLEG00000029695 #33	ENSNLEG00000035781	STRN4 (ENSNLEG00000002817) #34
Hominidae	ANCESTRAL SPECIES		ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00960000191916	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00940000161069.e.b	ENSGT00390000017267.i.a.a #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.i.b #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Orangutan	MODERN SPECIES	10	ENSPPYG00000010188	PLA2G4C (ENSPPYG00000010187)	CABP5 (ENSPPYG00000010186)	ELSPBP1 (ENSPPYG00000010185)	BSPH1 (ENSPPYG00000035619)	SULT2A1 (ENSPPYG00000010184)	ENSPPYG00000030562	SELENOW (ENSPPYG00000010182)	ENSPPYG00000010181 #15	EHD2 (ENSPPYG00000010180) #16	BICRA (ENSPPYG00000010179) #17	ZNF541 (ENSPPYG00000010178) #18	NAPA (ENSPPYG00000010177) #19	KPTN (ENSPPYG00000010176) #20	SLC8A2 (ENSPPYG00000010175) #21	MEIS3 (ENSPPYG00000010173) #22	DHX34 (ENSPPYG00000010172) #23	C5AR2 (ENSPPYG00000010171) ##24	C5AR1 (ENSPPYG00000032120) #24	CCDC9 (ENSPPYG00000010170)	ENSPPYG00000010169	SAE1 (ENSPPYG00000010168) #27	ZC3H4 (ENSPPYG00000010167) #28	TMEM160 (ENSPPYG00000032917) #29	NPAS1 (ENSPPYG00000010165) #30	ARHGAP35 (ENSPPYG00000010164) #31	AP2S1 (ENSPPYG00000010163) #32	SLC1A5 (ENSPPYG00000010161) #33	FKRP (ENSPPYG00000010160)	STRN4 (ENSPPYG00000010159) #34	PRKD2 (ENSPPYG00000010158) #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000164595.b	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a	ENSGT00390000017267.i.a.a #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.i.b #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000164595.b	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a	ENSGT00390000017267.i.a.a #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.i.b #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Pan	ANCESTRAL SPECIES	9	ENSGT00940000154432.f	ENSGT00940000164595.b	ENSGT00940000161634 #14	ENSGT00940000164595.a	ENSGT00910000147896	ENSGT00940000161069.e.b.a	ENSGT00390000017267.i.a.a #15	ENSGT00390000017267.i.a.b #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00910000148361	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.i.b #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Chimpanzee	MODERN SPECIES	10	ELSPBP1 (ENSPTRG00000011221)	BSPH1 (ENSPTRG00000011220)	SULT2A1 (ENSPTRG00000011219)	ENSPTRG00000052710	CRX (ENSPTRG00000011217) #14	TPRX1 (ENSPTRG00000028949)	ENSPTRG00000049635	SELENOW (ENSPTRG00000011216)	NOP53 (ENSPTRG00000011215) #15	EHD2 (ENSPTRG00000011214) #16	ENSPTRG00000011213 #17	ZNF541 (ENSPTRG00000011212) #18	NAPA (ENSPTRG00000011211) #19	KPTN (ENSPTRG00000011210) #20	SLC8A2 (ENSPTRG00000011209) #21	MEIS3 (ENSPTRG00000011208) #22	DHX34 (ENSPTRG00000011207) #23	C5AR2 (ENSPTRG00000041525) ##24	C5AR1 (ENSPTRG00000028958) #24	INAFM1 (ENSPTRG00000040861)	CCDC9 (ENSPTRG00000011204)	BBC3 (ENSPTRG00000011203)	SAE1 (ENSPTRG00000011202) #27	ZC3H4 (ENSPTRG00000011201) #28	TMEM160 (ENSPTRG00000011200) #29	NPAS1 (ENSPTRG00000011199) #30	ARHGAP35 (ENSPTRG00000011198) #31	AP2S1 (ENSPTRG00000011197) #32	SLC1A5 (ENSPTRG00000011194) #33	FKRP (ENSPTRG00000050198)	STRN4 (ENSPTRG00000011192) #34
Bonobo	MODERN SPECIES	10	PLA2G4C (ENSPPAG00000043463)	CABP5 (ENSPPAG00000039821)	ELSPBP1 (ENSPPAG00000020685)	BSPH1 (ENSPPAG00000043793)	SULT2A1 (ENSPPAG00000041390)	ENSPPAG00000037685	SELENOW (ENSPPAG00000036760)	ENSPPAG00000032995 #15	EHD2 (ENSPPAG00000039669) #16	BICRA (ENSPPAG00000003935) #17	ZNF541 (ENSPPAG00000039092) #18	NAPA (ENSPPAG00000033696) #19	KPTN (ENSPPAG00000008738) #20	SLC8A2 (ENSPPAG00000030149) #21	ENSPPAG00000024281	ENSPPAG00000016062 #22	DHX34 (ENSPPAG00000029582) #23	C5AR2 (ENSPPAG00000023287) ##24	C5AR1 (ENSPPAG00000027323) #24	CCDC9 (ENSPPAG00000036850)	ENSPPAG00000039786	SAE1 (ENSPPAG00000032113) #27	ZC3H4 (ENSPPAG00000037610) #28	TMEM160 (ENSPPAG00000040416) #29	NPAS1 (ENSPPAG00000040385) #30	ARHGAP35 (ENSPPAG00000035858) #31	ENSPPAG00000021619 #32	SLC1A5 (ENSPPAG00000040539) #33	FKRP (ENSPPAG00000037227)	STRN4 (ENSPPAG00000035898) #34	PRKD2 (ENSPPAG00000037267) #35
Human	MODERN SPECIES	10	CABP5 (ENSG00000105507)	ELSPBP1 (ENSG00000169393)	BSPH1 (ENSG00000188334)	SULT2A1 (ENSG00000105398)	TPRX2 (ENSG00000259009)	CRX (ENSG00000105392) #14	TPRX1 (ENSG00000178928)	SELENOW (ENSG00000178980)	NOP53 (ENSG00000105373) #15	EHD2 (ENSG00000024422) #16	BICRA (ENSG00000063169) #17	ZNF541 (ENSG00000118156) #18	NAPA (ENSG00000105402) #19	KPTN (ENSG00000118162) #20	SLC8A2 (ENSG00000118160) #21	MEIS3 (ENSG00000105419) #22	DHX34 (ENSG00000134815) #23	C5AR2 (ENSG00000134830) ##24	C5AR1 (ENSG00000197405) #24	INAFM1 (ENSG00000257704)	CCDC9 (ENSG00000105321)	BBC3 (ENSG00000105327)	SAE1 (ENSG00000142230) #27	ZC3H4 (ENSG00000130749) #28	TMEM160 (ENSG00000130748) #29	NPAS1 (ENSG00000130751) #30	ARHGAP35 (ENSG00000160007) #31	AP2S1 (ENSG00000042753) #32	SLC1A5 (ENSG00000105281) #33	FKRP (ENSG00000181027)	STRN4 (ENSG00000090372) #34
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	18	RNF112 (ENSGGOG00000001030)	SLC47A1 (ENSGGOG00000016236)	ALDH3A2 (ENSGGOG00000007664)	SLC47A2 (ENSGGOG00000007670)	ALDH3A1 (ENSGGOG00000007682)	ENSGGOG00000042248	ULK2 (ENSGGOG00000007689)	AKAP10 (ENSGGOG00000034845)	ENSGGOG00000040814	ENSGGOG00000024511	SPECC1 (ENSGGOG00000001874)	ENSGGOG00000042226	ENSGGOG00000041219	ENSGGOG00000021951	ENSGGOG00000004314	ENSGGOG00000027850 #22	ENSGGOG00000038364	ENSGGOG00000016448	ENSGGOG00000009640	USP22 (ENSGGOG00000008595)	DHRS7B (ENSGGOG00000008471)	TMEM11 (ENSGGOG00000008476)	NATD1 (ENSGGOG00000016265)	MAP2K3 (ENSGGOG00000000670)	KCNJ18 (ENSGGOG00000040998)	ENSGGOG00000041142	WSB1 (ENSGGOG00000015361)	ENSGGOG00000040351	KSR1 (ENSGGOG00000000817)	LGALS9 (ENSGGOG00000022973)	NOS2 (ENSGGOG00000000820)
Gorilla	MODERN SPECIES	10	ELSPBP1 (ENSGGOG00000001477)	BSPH1 (ENSGGOG00000000055)	SULT2A1 (ENSGGOG00000012156)	TPRX2 (ENSGGOG00000040885)	CRX (ENSGGOG00000016158) #14	TPRX1 (ENSGGOG00000009265)	ENSGGOG00000040974	SELENOW (ENSGGOG00000012269)	NOP53 (ENSGGOG00000005462) #15	EHD2 (ENSGGOG00000002346) #16	BICRA (ENSGGOG00000012809) #17	ZNF541 (ENSGGOG00000000277) #18	NAPA (ENSGGOG00000000703) #19	KPTN (ENSGGOG00000000702) #20	SLC8A2 (ENSGGOG00000011557) #21	ENSGGOG00000001093 #22	DHX34 (ENSGGOG00000010037) #23	C5AR2 (ENSGGOG00000016452) ##24	C5AR1 (ENSGGOG00000008622) #24	INAFM1 (ENSGGOG00000027893)	CCDC9 (ENSGGOG00000015097)	ENSGGOG00000040116	SAE1 (ENSGGOG00000013078) #27	ENSGGOG00000039096	ZC3H4 (ENSGGOG00000013071) #28	TMEM160 (ENSGGOG00000013410) #29	NPAS1 (ENSGGOG00000013398) #30	ARHGAP35 (ENSGGOG00000027302) #31	ENSGGOG00000011254 #32	SLC1A5 (ENSGGOG00000008792) #33	FKRP (ENSGGOG00000043279)
Strepsirrhini	ANCESTRAL SPECIES	16	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Bushbaby	MODERN SPECIES	267					ENSOGAG00000030968	ENSOGAG00000025340	CRX (ENSOGAG00000034554) #14	ENSOGAG00000028694	NOP53 (ENSOGAG00000024300) #15	EHD2 (ENSOGAG00000033142) #16	BICRA (ENSOGAG00000002399) #17	ZNF541 (ENSOGAG00000002397) #18	NAPA (ENSOGAG00000032621) #19	KPTN (ENSOGAG00000009999) #20	SLC8A2 (ENSOGAG00000029237) #21	MEIS3 (ENSOGAG00000002063) #22	DHX34 (ENSOGAG00000002061) #23	C5AR2 (ENSOGAG00000033946) ##24	C5AR1 (ENSOGAG00000000133) #24	INAFM1 (ENSOGAG00000029523)	CCDC9 (ENSOGAG00000015701)	BBC3 (ENSOGAG00000034738)	SAE1 (ENSOGAG00000007650) #27	ZC3H4 (ENSOGAG00000031123) #28	TMEM160 (ENSOGAG00000033520) #29	NPAS1 (ENSOGAG00000012829) #30	ARHGAP35 (ENSOGAG00000033334) #31	AP2S1 (ENSOGAG00000033467) #32	SLC1A5 (ENSOGAG00000033704) #33	FKRP (ENSOGAG00000026248)	STRN4 (ENSOGAG00000015276) #34
Lemuriformes	ANCESTRAL SPECIES	15	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Mouse lemur	MODERN SPECIES	14	LIG1 (ENSMICG00000007160)	CABP5 (ENSMICG00000007151)	ELSPBP1 (ENSMICG00000007142)	ENSMICG00000041886	SULT2A1 (ENSMICG00000037551)	ENSMICG00000035603	CRX (ENSMICG00000042307) #14	SELENOW (ENSMICG00000012606)	NOP53 (ENSMICG00000005580) #15	EHD2 (ENSMICG00000005571) #16	BICRA (ENSMICG00000028080) #17	ZNF541 (ENSMICG00000017737) #18	NAPA (ENSMICG00000011599) #19	KPTN (ENSMICG00000026946) #20	SLC8A2 (ENSMICG00000030836) #21	MEIS3 (ENSMICG00000031566) #22	DHX34 (ENSMICG00000011585) #23	C5AR1 (ENSMICG00000045174) #24	CCDC9 (ENSMICG00000008823)	ENSMICG00000008820	SAE1 (ENSMICG00000008807) #27	ZC3H4 (ENSMICG00000008786) #28	TMEM160 (ENSMICG00000035539) #29	NPAS1 (ENSMICG00000006346) #30	ARHGAP35 (ENSMICG00000037921) #31	AP2S1 (ENSMICG00000038528) #32	SLC1A5 (ENSMICG00000000030) #33	FKRP (ENSMICG00000043598)	STRN4 (ENSMICG00000015400) #34	PRKD2 (ENSMICG00000015377) #35	DACT3 (ENSMICG00000042964) #36
Lemuriformes_a	ANCESTRAL SPECIES	5	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Coquerels sifaka	MODERN SPECIES	568	SMARCA1 (ENSPCOG00000020722)	ZSWIM9 (ENSPCOG00000016877)	LIG1 (ENSPCOG00000027835)	CABP5 (ENSPCOG00000028027)	ENSPCOG00000019131	SULT2A1 (ENSPCOG00000014554)	CRX (ENSPCOG00000021790) #14	SELENOW (ENSPCOG00000013997)	NOP53 (ENSPCOG00000016124) #15	EHD2 (ENSPCOG00000010027) #16	BICRA (ENSPCOG00000017166) #17	ZNF541 (ENSPCOG00000006138) #18	NAPA (ENSPCOG00000014946) #19	KPTN (ENSPCOG00000022678) #20	SLC8A2 (ENSPCOG00000023795) #21	MEIS3 (ENSPCOG00000024690) #22	DHX34 (ENSPCOG00000027801) #23	CCDC9 (ENSPCOG00000020816)	ENSPCOG00000019970	SAE1 (ENSPCOG00000018619) #27	ZC3H4 (ENSPCOG00000017169) #28	TMEM160 (ENSPCOG00000028665) #29	NPAS1 (ENSPCOG00000017882) #30	ARHGAP35 (ENSPCOG00000015788) #31	AP2S1 (ENSPCOG00000022192) #32	SLC1A5 (ENSPCOG00000024625) #33	FKRP (ENSPCOG00000008360)	STRN4 (ENSPCOG00000028165) #34	PRKD2 (ENSPCOG00000018544) #35	DACT3 (ENSPCOG00000024045) #36	GNG8 (ENSPCOG00000014293) #37
Greater bamboo lemur	MODERN SPECIES	67	ZSWIM9 (ENSPSMG00000024028)	LIG1 (ENSPSMG00000024001)	CABP5 (ENSPSMG00000023902)	ELSPBP1 (ENSPSMG00000023896)	BSPH1 (ENSPSMG00000023887)	ENSPSMG00000023884	SULT2A1 (ENSPSMG00000023880)	CRX (ENSPSMG00000023876) #14	SELENOW (ENSPSMG00000023871)	NOP53 (ENSPSMG00000023860) #15	EHD2 (ENSPSMG00000023831) #16	ZNF541 (ENSPSMG00000023826) #18	NAPA (ENSPSMG00000023803) #19	KPTN (ENSPSMG00000023747) #20	SLC8A2 (ENSPSMG00000023733) #21	MEIS3 (ENSPSMG00000023720) #22	DHX34 (ENSPSMG00000023684) #23	C5AR2 (ENSPSMG00000023674) ##24	C5AR1 (ENSPSMG00000023671) #24	INAFM1 (ENSPSMG00000023664)	CCDC9 (ENSPSMG00000023662)	BBC3 (ENSPSMG00000023660)	SAE1 (ENSPSMG00000023654) #27	ENSPSMG00000023638	ZC3H4 (ENSPSMG00000023633) #28	TMEM160 (ENSPSMG00000023618) #29	NPAS1 (ENSPSMG00000023615) #30
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000166546	ENSGT00960000191916	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Ursidae	ANCESTRAL SPECIES	30	ENSGT00940000167541	ENSGT00940000157783	ENSGT00940000160506.d	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634.h #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a.x #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007.d #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Ursus	ANCESTRAL SPECIES	13	ENSGT00830000128447	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506.d	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634.h #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00390000005826.a.a.x #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00990000206928	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00550000075007.d #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00950000183095.a.b.a.b.a.h.a #34	ENSGT00950000183024.a.b.b #35	ENSGT00950000183181.B.b #36
American black bear	MODERN SPECIES	1824												NAPA (ENSUAMG00000020183) #19	ENSUAMG00000020184 #20	KPTN (ENSUAMG00000020185) #20	SLC8A2 (ENSUAMG00000020186) #21	MEIS3 (ENSUAMG00000020187) #22	ENSUAMG00000020188	DHX34 (ENSUAMG00000020189) #23
Polar bear	MODERN SPECIES	115	CARD8 (ENSUMAG00000023856)	ENSUMAG00000023850	LIG1 (ENSUMAG00000023845)	CABP5 (ENSUMAG00000023843)	ELSPBP1 (ENSUMAG00000023840)	BSPH1 (ENSUMAG00000023839)	ENSUMAG00000023838	CRX (ENSUMAG00000023837) #14	SELENOW (ENSUMAG00000023836)	ENSUMAG00000023832 #15	ENSUMAG00000023830 #16	ENSUMAG00000023829 #16	NAPA (ENSUMAG00000023811) #19	KPTN (ENSUMAG00000023806) #20	ENSUMAG00000023803 #21	MEIS3 (ENSUMAG00000023795) #22	C5AR1 (ENSUMAG00000023780) #24	CCDC9 (ENSUMAG00000023773)	SAE1 (ENSUMAG00000023769) #27	ENSUMAG00000023768 #28	ENSUMAG00000023763 #30	ARHGAP35 (ENSUMAG00000023756) #31	ENSUMAG00000023753 #32	ENSUMAG00000023748 #33	STRN4 (ENSUMAG00000023724) #34	PRKD2 (ENSUMAG00000023719) #35	GNG8 (ENSUMAG00000023717) #37	ENSUMAG00000023716	ENSUMAG00000023715	CCDC8 (ENSUMAG00000023713)	PNMA8C (ENSUMAG00000023712)
Giant Panda	MODERN SPECIES	3	CARD8 (ENSAMEG00000015082)	ZSWIM9 (ENSAMEG00000015090)	ENSAMEG00000015091	CABP5 (ENSAMEG00000015170)	ELSPBP1 (ENSAMEG00000015177)	BSPH1 (ENSAMEG00000024094)	CRX (ENSAMEG00000015191) #14	SELENOW (ENSAMEG00000028907)	NOP53 (ENSAMEG00000015214) #15	EHD2 (ENSAMEG00000015263) #16	BICRA (ENSAMEG00000008090) #17	ZNF541 (ENSAMEG00000029569) #18	NAPA (ENSAMEG00000008104) #19	KPTN (ENSAMEG00000008142) #20	SLC8A2 (ENSAMEG00000008172) #21	MEIS3 (ENSAMEG00000008199) #22	DHX34 (ENSAMEG00000008270) #23	C5AR2 (ENSAMEG00000019477) ##24	CCDC9 (ENSAMEG00000008286)	BBC3 (ENSAMEG00000008310)	SAE1 (ENSAMEG00000008313) #27	ZC3H4 (ENSAMEG00000008349) #28	TMEM160 (ENSAMEG00000028478) #29	ARHGAP35 (ENSAMEG00000008374) #31	ENSAMEG00000008394 #32	SLC1A5 (ENSAMEG00000008407) #33	STRN4 (ENSAMEG00000008435) #34	PRKD2 (ENSAMEG00000008498) #35	ENSAMEG00000026303 #36	GNG8 (ENSAMEG00000008557) #37	ENSAMEG00000008560
Mustelinae	ANCESTRAL SPECIES	7	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Ferret	DUPLICATION
Ferret	MODERN SPECIES	291	ENSMPUG00000004302	ZSWIM9 (ENSMPUG00000004307)	LIG1 (ENSMPUG00000004309)	CABP5 (ENSMPUG00000004329)	ELSPBP1 (ENSMPUG00000004369)	ENSMPUG00000004404	CRX (ENSMPUG00000004411) #14	SELENOW (ENSMPUG00000004433)	NOP53 (ENSMPUG00000004456) #15	EHD2 (ENSMPUG00000004466) #16	BICRA (ENSMPUG00000004473) #17	ZNF541 (ENSMPUG00000004486) #18	NAPA (ENSMPUG00000004511) #19	KPTN (ENSMPUG00000004660) #20	SLC8A2 (ENSMPUG00000004745) #21	ENSMPUG00000004760 #22	DHX34 (ENSMPUG00000004925) #23	C5AR2 (ENSMPUG00000019367) ##24	C5AR1 (ENSMPUG00000019368) #24	CCDC9 (ENSMPUG00000004941)	BBC3 (ENSMPUG00000004953)	SAE1 (ENSMPUG00000004965) #27	ZC3H4 (ENSMPUG00000005065) #28	TMEM160 (ENSMPUG00000005131) #29	NPAS1 (ENSMPUG00000005118) #30	ARHGAP35 (ENSMPUG00000005138) #31	AP2S1 (ENSMPUG00000005143) #32	SLC1A5 (ENSMPUG00000005149) #33	FKRP (ENSMPUG00000019369)	STRN4 (ENSMPUG00000005157) #34	PRKD2 (ENSMPUG00000005234) #35
Ferret	MODERN SPECIES	276									PHYHIPL (ENSMPUG00000011002)	FAM13C (ENSMPUG00000011007)	SLC16A9 (ENSMPUG00000011013)	ENSMPUG00000011021	CCDC6 (ENSMPUG00000011027)	ANK3 (ENSMPUG00000011035)	ENSMPUG00000019949	ENSMPUG00000019950 #22	CDK1 (ENSMPUG00000011057)	RHOBTB1 (ENSMPUG00000011060)	ENSMPUG00000019951	TMEM26 (ENSMPUG00000011065)	CABCOCO1 (ENSMPUG00000011071)	ARID5B (ENSMPUG00000011076)	ENSMPUG00000011082	RTKN2 (ENSMPUG00000011086)	ZNF365 (ENSMPUG00000011094)	ENSMPUG00000011097	ADO (ENSMPUG00000019952)	EGR2 (ENSMPUG00000011103)	NRBF2 (ENSMPUG00000011106)	JMJD1C (ENSMPUG00000011122)	ENSMPUG00000019953
American mink	MODERN SPECIES	135	LIG1 (ENSNVIG00000011315)	CABP5 (ENSNVIG00000011286)	ELSPBP1 (ENSNVIG00000011256)	ENSNVIG00000011237	ENSNVIG00000011212	CRX (ENSNVIG00000011203) #14	ENSNVIG00000011194	SELENOW (ENSNVIG00000011156)	NOP53 (ENSNVIG00000011121) #15	EHD2 (ENSNVIG00000011110) #16	BICRA (ENSNVIG00000011095) #17	ZNF541 (ENSNVIG00000011069) #18	NAPA (ENSNVIG00000011031) #19	KPTN (ENSNVIG00000011012) #20	SLC8A2 (ENSNVIG00000011004) #21	MEIS3 (ENSNVIG00000010981) #22	DHX34 (ENSNVIG00000010958) #23	C5AR2 (ENSNVIG00000010949) ##24	C5AR1 (ENSNVIG00000010940) #24	CCDC9 (ENSNVIG00000010901)	ENSNVIG00000010884	SAE1 (ENSNVIG00000010826) #27	ZC3H4 (ENSNVIG00000010804) #28	TMEM160 (ENSNVIG00000010793) #29	NPAS1 (ENSNVIG00000010755) #30	ARHGAP35 (ENSNVIG00000010727) #31	AP2S1 (ENSNVIG00000010605) #32	SLC1A5 (ENSNVIG00000010588) #33	FKRP (ENSNVIG00000010581)	STRN4 (ENSNVIG00000010539) #34	PRKD2 (ENSNVIG00000009771) #35
Canidae	ANCESTRAL SPECIES	5	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000166546	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00390000018706.n	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Dingo	MODERN SPECIES	125	ZSWIM9 (ENSCAFG00020026450)	LIG1 (ENSCAFG00020026453)	CABP5 (ENSCAFG00020026519)	ENSCAFG00020026523	ENSCAFG00020026524	BSPH1 (ENSCAFG00020026526)	ENSCAFG00020026528	ENSCAFG00020026529	CRX (ENSCAFG00020026531) #14	EHD2 (ENSCAFG00020000226) #16	BICRA (ENSCAFG00020000660) #17	ZNF541 (ENSCAFG00020000764) #18	NAPA (ENSCAFG00020000831) #19	KPTN (ENSCAFG00020000973) #20	SLC8A2 (ENSCAFG00020001118) #21	MEIS3 (ENSCAFG00020001147) #22	DHX34 (ENSCAFG00020001163) #23	C5AR2 (ENSCAFG00020001172) ##24	C5AR1 (ENSCAFG00020001178) #24	INAFM1 (ENSCAFG00020001184)	CCDC9 (ENSCAFG00020001196)	ENSCAFG00020001204	SAE1 (ENSCAFG00020001254) #27	ZC3H4 (ENSCAFG00020001450) #28	ENSCAFG00020001527 #30	ENSCAFG00020001534 #30	ARHGAP35 (ENSCAFG00020001540) #31	ENSCAFG00020001550 #32	SLC1A5 (ENSCAFG00020001559) #33	FKRP (ENSCAFG00020001564)	STRN4 (ENSCAFG00020001572) #34
Dog	MODERN SPECIES		ZSWIM9 (ENSCAFG00845001889)	LIG1 (ENSCAFG00845002011)	CABP5 (ENSCAFG00845002104)	ELSPBP1 (ENSCAFG00845002136)	ENSCAFG00845002180	ENSCAFG00845002194	CRX (ENSCAFG00845002208) #14	ENSCAFG00845002224	NOP53 (ENSCAFG00845002253) #15	EHD2 (ENSCAFG00845002294) #16	BICRA (ENSCAFG00845002344) #17	ZNF541 (ENSCAFG00845002412) #18	NAPA (ENSCAFG00845002467) #19	KPTN (ENSCAFG00845002500) #20	SLC8A2 (ENSCAFG00845002555) #21	MEIS3 (ENSCAFG00845002685) #22	DHX34 (ENSCAFG00845002720) #23	C5AR2 (ENSCAFG00845002732) ##24	C5AR1 (ENSCAFG00845002761) #24	INAFM1 (ENSCAFG00845002784)	CCDC9 (ENSCAFG00845002800)	BBC3 (ENSCAFG00845002815)	SAE1 (ENSCAFG00845002951) #27	ZC3H4 (ENSCAFG00845002992) #28	TMEM160 (ENSCAFG00845003007) #29	ARHGAP35 (ENSCAFG00845003034) #30	ARHGAP35 (ENSCAFG00845003086) #31	AP2S1 (ENSCAFG00845003157) #32	SLC1A5 (ENSCAFG00845003284) #33	FKRP (ENSCAFG00845003332)	STRN4 (ENSCAFG00845003353) #34
Red fox	MODERN SPECIES	101	CARD8 (ENSVVUG00000023304)	ENSVVUG00000023311	LIG1 (ENSVVUG00000023318)	CABP5 (ENSVVUG00000023332)	ELSPBP1 (ENSVVUG00000023338)	BSPH1 (ENSVVUG00000023344)	ENSVVUG00000023349	CRX (ENSVVUG00000023352) #14	ENSVVUG00000023357	NOP53 (ENSVVUG00000023365) #15	EHD2 (ENSVVUG00000023369) #16	ZNF541 (ENSVVUG00000023392) #18	NAPA (ENSVVUG00000023413) #19	KPTN (ENSVVUG00000023485) #20	SLC8A2 (ENSVVUG00000023490) #21	MEIS3 (ENSVVUG00000023497) #22	DHX34 (ENSVVUG00000023515) #23	C5AR2 (ENSVVUG00000023517) ##24	C5AR1 (ENSVVUG00000023518) #24	CCDC9 (ENSVVUG00000023520)	ENSVVUG00000023521	ENSVVUG00000000139	SAE1 (ENSVVUG00000000163) #27	ZC3H4 (ENSVVUG00000000208) #28	TMEM160 (ENSVVUG00000000280) #29	NPAS1 (ENSVVUG00000000317) #30	ARHGAP35 (ENSVVUG00000000350) #31	AP2S1 (ENSVVUG00000000416) #32	FKRP (ENSVVUG00000000452)	SLC1A5 (ENSVVUG00000000475) #33	STRN4 (ENSVVUG00000000583) #34
Felidae	ANCESTRAL SPECIES	7	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069.g	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Panthera	ANCESTRAL SPECIES	20	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069.g	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Tiger	MODERN SPECIES	36	ENSPTIG00000014657	CARD8 (ENSPTIG00000013121)	ENSPTIG00000012590	LIG1 (ENSPTIG00000006127)	CABP5 (ENSPTIG00000004572)	ENSPTIG00000002518	BSPH1 (ENSPTIG00000021843)	ENSPTIG00000021675	ENSPTIG00000021571	ENSPTIG00000018779	EHD2 (ENSPTIG00000018608) #16	ZNF541 (ENSPTIG00000014919) #18	NAPA (ENSPTIG00000012945) #19	ENSPTIG00000012410 #20	ENSPTIG00000011113 #21	MEIS3 (ENSPTIG00000019415) #22	DHX34 (ENSPTIG00000018435) #23	C5AR1 (ENSPTIG00000000446) #24	ENSPTIG00000016579	SAE1 (ENSPTIG00000016036) #27	ZC3H4 (ENSPTIG00000014229) #28	ENSPTIG00000013620 #30	ARHGAP35 (ENSPTIG00000013260) #31	ENSPTIG00000012880 #32	SLC1A5 (ENSPTIG00000011531) #33	STRN4 (ENSPTIG00000005381) #34	PRKD2 (ENSPTIG00000018488) #35	ENSPTIG00000017935 #36	GNG8 (ENSPTIG00000017646) #37	ENSPTIG00000017515	ENSPTIG00000015079
Panthera_a	ANCESTRAL SPECIES	22	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069.g	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
leopard	MODERN SPECIES	103	CARD8 (ENSPPRG00000023659)	ZSWIM9 (ENSPPRG00000024003)	LIG1 (ENSPPRG00000018056)	CABP5 (ENSPPRG00000010847)	ENSPPRG00000010583	BSPH1 (ENSPPRG00000010439)	ENSPPRG00000009639	CRX (ENSPPRG00000009458) #14	ENSPPRG00000009309	NOP53 (ENSPPRG00000008954) #15	EHD2 (ENSPPRG00000008148) #16	ZNF541 (ENSPPRG00000006351) #18	NAPA (ENSPPRG00000005495) #19	KPTN (ENSPPRG00000004578) #20	SLC8A2 (ENSPPRG00000003527) #21	MEIS3 (ENSPPRG00000003182) #22	DHX34 (ENSPPRG00000002535) #23	C5AR2 (ENSPPRG00000015739) ##24	C5AR1 (ENSPPRG00000015726) #24	INAFM1 (ENSPPRG00000015681)	CCDC9 (ENSPPRG00000001198)	BBC3 (ENSPPRG00000000897)	SAE1 (ENSPPRG00000000641) #27	ZC3H4 (ENSPPRG00000023272) #28	TMEM160 (ENSPPRG00000023643) #29	NPAS1 (ENSPPRG00000023743) #30	ARHGAP35 (ENSPPRG00000024753) #31	AP2S1 (ENSPPRG00000022307) #32	ENSPPRG00000019101 #32	SLC1A5 (ENSPPRG00000017631) #33	FKRP (ENSPPRG00000015401)
lion	MODERN SPECIES	15	ZSWIM9 (ENSPLOG00000007613)	LIG1 (ENSPLOG00000007402)	CABP5 (ENSPLOG00000007311)	ELSPBP1 (ENSPLOG00000007259)	BSPH1 (ENSPLOG00000007225)	ENSPLOG00000007210	CRX (ENSPLOG00000007195) #14	SELENOW (ENSPLOG00000007177)	NOP53 (ENSPLOG00000007129) #15	ENSPLOG00000007108 #16	BICRA (ENSPLOG00000007084) #17	ZNF541 (ENSPLOG00000007040) #18	NAPA (ENSPLOG00000006967) #19	KPTN (ENSPLOG00000006920) #20	SLC8A2 (ENSPLOG00000006887) #21	MEIS3 (ENSPLOG00000006810) #22	DHX34 (ENSPLOG00000006682) #23	C5AR2 (ENSPLOG00000006656) ##24	C5AR1 (ENSPLOG00000006646) #24	INAFM1 (ENSPLOG00000006630)	CCDC9 (ENSPLOG00000006569)	BBC3 (ENSPLOG00000006527)	SAE1 (ENSPLOG00000006483) #27	ZC3H4 (ENSPLOG00000006441) #28	ENSPLOG00000006416 #29	NPAS1 (ENSPLOG00000006360) #30	ARHGAP35 (ENSPLOG00000006320) #31	AP2S1 (ENSPLOG00000006172) #32	ENSPLOG00000006107 #33	FKRP (ENSPLOG00000006088)	STRN4 (ENSPLOG00000006025) #34
Cat	MODERN SPECIES	246	CARD8 (ENSFCAG00000023335)	ZSWIM9 (ENSFCAG00000045504)	LIG1 (ENSFCAG00000007411)	CABP5 (ENSFCAG00000007410)	ELSPBP1 (ENSFCAG00000010611)	ENSFCAG00000039201	ENSFCAG00000045134 #14	SELENOW (ENSFCAG00000015176)	NOP53 (ENSFCAG00000010861) #15	EHD2 (ENSFCAG00000029117) #16	BICRA (ENSFCAG00000027050) #17	ZNF541 (ENSFCAG00000028959) #18	NAPA (ENSFCAG00000006151) #19	KPTN (ENSFCAG00000006149) #20	SLC8A2 (ENSFCAG00000029230) #21	MEIS3 (ENSFCAG00000006146) #22	DHX34 (ENSFCAG00000006144) #23	C5AR2 (ENSFCAG00000043336) ##24	C5AR1 (ENSFCAG00000046725) #24	CCDC9 (ENSFCAG00000004837)	BBC3 (ENSFCAG00000040792)	SAE1 (ENSFCAG00000027112) #27	ZC3H4 (ENSFCAG00000004835) #28	ENSFCAG00000032417 #29	NPAS1 (ENSFCAG00000004833) #30	ARHGAP35 (ENSFCAG00000004831) #31	AP2S1 (ENSFCAG00000031554) #32	SLC1A5 (ENSFCAG00000005736) #33	FKRP (ENSFCAG00000024153)	STRN4 (ENSFCAG00000000782) #34	PRKD2 (ENSFCAG00000010311) #35
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Equus	ANCESTRAL SPECIES	1	ENSGT00940000154432.r	ENSGT00940000154432.q.a.b.a	ENSGT00940000154432.q.a.a.a.b	ENSGT00940000154432.q.a.b.b	ENSGT00940000154432.q.a.a.a.a	ENSGT00940000161634 #14	ENSGT00940000154432.q.a.a.b	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Donkey	MODERN SPECIES	18	ENSEASG00005004396	ENSEASG00005004386	ENSEASG00005004378	ENSEASG00005031534	CRX (ENSEASG00005004365) #14	ENSEASG00005036968	ENSEASG00005004352	NOP53 (ENSEASG00005004345) #15	EHD2 (ENSEASG00005004339) #16	ZNF541 (ENSEASG00005004241) #18	NAPA (ENSEASG00005004201) #19	KPTN (ENSEASG00005004183) #20	ENSEASG00005004180 #21	ENSEASG00005004177 #21	ENSEASG00005028907	MEIS3 (ENSEASG00005004166) #22	DHX34 (ENSEASG00005004155) #23	C5AR2 (ENSEASG00005025956) ##24	C5AR1 (ENSEASG00005026249) #24	INAFM1 (ENSEASG00005030427)	CCDC9 (ENSEASG00005004139)	ENSEASG00005035087	SAE1 (ENSEASG00005004124) #27	ZC3H4 (ENSEASG00005004107) #28	TMEM160 (ENSEASG00005023909) #29	ENSEASG00005038114 #30	ENSEASG00005004094 #30	ENSEASG00005032745 #30	ARHGAP35 (ENSEASG00005004087) #31	ENSEASG00005032304 #32	SLC1A5 (ENSEASG00005004062) #33
Horse	MODERN SPECIES	1	ENSECAG00000049982	ENSECAG00000007898	ENSECAG00000020744	ENSECAG00000057574	ENSECAG00000010649	CRX (ENSECAG00000010376) #14	ENSECAG00000029321	SELENOW (ENSECAG00000006989)	NOP53 (ENSECAG00000026850) #15	EHD2 (ENSECAG00000028265) #16	BICRA (ENSECAG00000030809) #17	ZNF541 (ENSECAG00000019417) #18	NAPA (ENSECAG00000006959) #19	KPTN (ENSECAG00000018392) #20	SLC8A2 (ENSECAG00000008392) #21	MEIS3 (ENSECAG00000016791) #22	DHX34 (ENSECAG00000011354) #23	C5AR2 (ENSECAG00000006218) ##24	C5AR1 (ENSECAG00000006153) #24	CCDC9 (ENSECAG00000008559)	ENSECAG00000031168	SAE1 (ENSECAG00000002087) #27	ZC3H4 (ENSECAG00000024342) #28	NPAS1 (ENSECAG00000022513) #30	ARHGAP35 (ENSECAG00000017712) #31	AP2S1 (ENSECAG00000016403) #32	SLC1A5 (ENSECAG00000011637) #33	FKRP (ENSECAG00000010652)	STRN4 (ENSECAG00000002830) #34	PRKD2 (ENSECAG00000024775) #35	DACT3 (ENSECAG00000026972) #36
Chiroptera	ANCESTRAL SPECIES	16	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011.c #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Megabat	MODERN SPECIES	654												ZNF541 (ENSPVAG00000004031) #18	NAPA (ENSPVAG00000004030) #19	KPTN (ENSPVAG00000004028) #20	SLC8A2 (ENSPVAG00000004025) #21	MEIS3 (ENSPVAG00000004023) #22	DHX34 (ENSPVAG00000004017) #23
Microchiroptera	ANCESTRAL SPECIES	18	ENSGT00390000011694	ENSGT00940000167541	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007 #27	ENSGT00940000160011.c #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010005515	ZSWIM9 (ENSRFEG00010005491)	ENSRFEG00010005427	CABP5 (ENSRFEG00010005387)	ENSRFEG00010005368	SULT2A1 (ENSRFEG00010005353)	CRX (ENSRFEG00010005332) #14	SELENOW (ENSRFEG00010005319)	NOP53 (ENSRFEG00010015079) #15	EHD2 (ENSRFEG00010015006) #16	BICRA (ENSRFEG00010014745) #17	ZNF541 (ENSRFEG00010014459) #18	NAPA (ENSRFEG00010014363) #19	KPTN (ENSRFEG00010014307) #20	SLC8A2 (ENSRFEG00010014268) #21	MEIS3 (ENSRFEG00010014079) #22	DHX34 (ENSRFEG00010014000) #23	C5AR2 (ENSRFEG00010013977) ##24	ENSRFEG00010013958	C5AR1 (ENSRFEG00010013939) #24	ENSRFEG00010013918	CCDC9 (ENSRFEG00010013812)	ENSRFEG00010013509	SAE1 (ENSRFEG00010013378) #27	ZC3H4 (ENSRFEG00010013266) #28	TMEM160 (ENSRFEG00010013212) #29	NPAS1 (ENSRFEG00010013143) #30	ARHGAP35 (ENSRFEG00010013104) #31	AP2S1 (ENSRFEG00010012755) #32	SLC1A5 (ENSRFEG00010012525) #33	FKRP (ENSRFEG00010012506)
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Suina	ANCESTRAL SPECIES	2	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003.b	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Pig	MODERN SPECIES	14	LIG1 (ENSSSCG00000003128)	CABP5 (ENSSSCG00000003126)	ELSPBP1 (ENSSSCG00000003125)	BSPH1 (ENSSSCG00000003123)	ENSSSCG00000058863	SULT2A1 (ENSSSCG00000033207)	CRX (ENSSSCG00000003124) #14	SELENOW (ENSSSCG00000034313)	NOP53 (ENSSSCG00000022774) #15	EHD2 (ENSSSCG00000023371) #16	BICRA (ENSSSCG00000022302) #17	ZNF541 (ENSSSCG00000003119) #18	NAPA (ENSSSCG00000003120) #19	KPTN (ENSSSCG00000003121) #20	SLC8A2 (ENSSSCG00000029567) #21	MEIS3 (ENSSSCG00000003115) #22	DHX34 (ENSSSCG00000003114) #23	C5AR2 (ENSSSCG00000003113) ##24	C5AR1 (ENSSSCG00000056729) #24	CCDC9 (ENSSSCG00000024240)	BBC3 (ENSSSCG00000003112)	SAE1 (ENSSSCG00000003111) #27	ZC3H4 (ENSSSCG00000003110) #28	TMEM160 (ENSSSCG00000003109) #29	NPAS1 (ENSSSCG00000003108) #30	ARHGAP35 (ENSSSCG00000003107) #31	AP2S1 (ENSSSCG00000003106) #32	SLC1A5 (ENSSSCG00000003105) #33	FKRP (ENSSSCG00000003103)	STRN4 (ENSSSCG00000003104) #34	PRKD2 (ENSSSCG00000026152) #35
Chacoan peccary	MODERN SPECIES	799	LIG1 (ENSCWAG00000013278)	CABP5 (ENSCWAG00000013178)	ELSPBP1 (ENSCWAG00000013009)	BSPH1 (ENSCWAG00000012970)	SULT2A1 (ENSCWAG00000012896)	CRX (ENSCWAG00000012855) #14	SELENOW (ENSCWAG00000012829)	NOP53 (ENSCWAG00000012770) #15	EHD2 (ENSCWAG00000012728) #16	BICRA (ENSCWAG00000012587) #17	ZNF541 (ENSCWAG00000012278) #18	NAPA (ENSCWAG00000012199) #19	KPTN (ENSCWAG00000012157) #20	SLC8A2 (ENSCWAG00000011951) #21	ENSCWAG00000011922	MEIS3 (ENSCWAG00000011591) #22	DHX34 (ENSCWAG00000011536) #23	C5AR2 (ENSCWAG00000011520) ##24	C5AR1 (ENSCWAG00000011461) #24	INAFM1 (ENSCWAG00000011443)	CCDC9 (ENSCWAG00000011355)	BBC3 (ENSCWAG00000011285)	SAE1 (ENSCWAG00000011191) #27	ZC3H4 (ENSCWAG00000011062) #28	TMEM160 (ENSCWAG00000011029) #29	NPAS1 (ENSCWAG00000010905) #30	ARHGAP35 (ENSCWAG00000010834) #31	AP2S1 (ENSCWAG00000010683) #32	SLC1A5 (ENSCWAG00000010631) #33	FKRP (ENSCWAG00000010618)	STRN4 (ENSCWAG00000010545) #34
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Camelidae	ANCESTRAL SPECIES	15	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00710000107236	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35	ENSGT00950000183181.B.b #36
Arabian camel	MODERN SPECIES	35	LIG1 (ENSCDRG00005001482)	CABP5 (ENSCDRG00005001418)	ELSPBP1 (ENSCDRG00005001383)	BSPH1 (ENSCDRG00005001366)	ENSCDRG00005001351	SULT2A1 (ENSCDRG00005001335)	CRX (ENSCDRG00005001324) #14	SELENOW (ENSCDRG00005001304)	NOP53 (ENSCDRG00005001286) #15	EHD2 (ENSCDRG00005001269) #16	BICRA (ENSCDRG00005001209) #17	ZNF541 (ENSCDRG00005001169) #18	NAPA (ENSCDRG00005001100) #19	KPTN (ENSCDRG00005001072) #20	SLC8A2 (ENSCDRG00005001049) #21	MEIS3 (ENSCDRG00005001000) #22	DHX34 (ENSCDRG00005000955) #23	C5AR2 (ENSCDRG00005000932) ##24	C5AR1 (ENSCDRG00005000922) #24	CCDC9 (ENSCDRG00005000886)	ENSCDRG00005000861	SAE1 (ENSCDRG00005000803) #27	ZC3H4 (ENSCDRG00005000747) #28	TMEM160 (ENSCDRG00005000726) #29	NPAS1 (ENSCDRG00005000700) #30	ENSCDRG00005000682	ARHGAP35 (ENSCDRG00005000613) #31	AP2S1 (ENSCDRG00005000547) #32	SLC1A5 (ENSCDRG00005000433) #33	STRN4 (ENSCDRG00005000314) #34	PRKD2 (ENSCDRG00005000229) #35
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Cetacea	ANCESTRAL SPECIES	6	ENSGT00950000183364	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Blue whale	MODERN SPECIES	10	EMP3 (ENSBMSG00010018476)	ENSBMSG00010018517	ZSWIM9 (ENSBMSG00010018625)	LIG1 (ENSBMSG00010018736)	CABP5 (ENSBMSG00010019330)	BSPH1 (ENSBMSG00010019372)	ENSBMSG00010019459	CRX (ENSBMSG00010019483) #14	SELENOW (ENSBMSG00010019516)	NOP53 (ENSBMSG00010019557) #15	EHD2 (ENSBMSG00010019668) #16	BICRA (ENSBMSG00010019701) #17	ZNF541 (ENSBMSG00010019774) #18	NAPA (ENSBMSG00010019832) #19	SLC8A2 (ENSBMSG00010019907) #21	MEIS3 (ENSBMSG00010019996) #22	DHX34 (ENSBMSG00010020024) #23	C5AR2 (ENSBMSG00010020050) ##24	C5AR1 (ENSBMSG00010020065) #24	CCDC9 (ENSBMSG00010020094)	BBC3 (ENSBMSG00010020342)	SAE1 (ENSBMSG00010020376) #27	ZC3H4 (ENSBMSG00010020432) #28	TMEM160 (ENSBMSG00010020478) #29	NPAS1 (ENSBMSG00010020493) #30	ARHGAP35 (ENSBMSG00010020533) #31	AP2S1 (ENSBMSG00010020580) #32	SLC1A5 (ENSBMSG00010020761) #33	FKRP (ENSBMSG00010020816)	STRN4 (ENSBMSG00010020831) #34	PRKD2 (ENSBMSG00010020856) #35
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00950000182696.B.b	ENSGT00950000183364	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000163003	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Sperm whale	MODERN SPECIES	8	NOVA2 (ENSPCTG00005012295)	HIF3A (ENSPCTG00005011738)	CCDC8 (ENSPCTG00005011665)	ENSPCTG00005011609	STRN4 (ENSPCTG00005011583) #34	ARHGAP35 (ENSPCTG00005011530) #31	ENSPCTG00005011494 #28	ENSPCTG00005011470 #27	ENSPCTG00005011422 #27	ENSPCTG00005011401	ENSPCTG00005011381	ZNF541 (ENSPCTG00005010975) #18	NOP53 (ENSPCTG00005010906) #15	EHD2 (ENSPCTG00005010881) #16	SLC8A2 (ENSPCTG00005010761) #21	MEIS3 (ENSPCTG00005010662) #22	DHX34 (ENSPCTG00005010600)	C5AR1 (ENSPCTG00005010550) #24	C5AR2 (ENSPCTG00005010531) ##24	CRX (ENSPCTG00005010490) #14	BSPH1 (ENSPCTG00005010425)	CABP5 (ENSPCTG00005010338)	LIG1 (ENSPCTG00005010166)	ZSWIM9 (ENSPCTG00005010099)	ENSPCTG00005009812	EMP3 (ENSPCTG00005009729)	TMEM143 (ENSPCTG00005009645)	FUT2 (ENSPCTG00005009628)	ENSPCTG00005009590	BAX (ENSPCTG00005009439)	GYS1 (ENSPCTG00005009316)
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000154315.a	ENSGT00950000182696.B.b	ENSGT00950000183364	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Dolphin	MODERN SPECIES	267												ZNF541 (ENSTTRG00000002308) #18	NAPA (ENSTTRG00000002302) #19	KPTN (ENSTTRG00000002295) #20	SLC8A2 (ENSTTRG00000002288) #21	MEIS3 (ENSTTRG00000002278) #22	DHX34 (ENSTTRG00000002257) #23	C5AR2 (ENSTTRG00000002254) ##24	CCDC9 (ENSTTRG00000002244)	BBC3 (ENSTTRG00000002238)	SAE1 (ENSTTRG00000002224) #27	ZC3H4 (ENSTTRG00000002197) #28
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000154315.a	ENSGT00950000182696.B.b	ENSGT00950000183364	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000154315.a	ENSGT00950000182696.B.b	ENSGT00950000183364	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Beluga whale	MODERN SPECIES	14	TMEM143 (ENSDLEG00000001353)	EMP3 (ENSDLEG00000001369)	ENSDLEG00000001424	ZSWIM9 (ENSDLEG00000001465)	LIG1 (ENSDLEG00000001815)	CABP5 (ENSDLEG00000003694)	CRX (ENSDLEG00000003702) #14	SELENOW (ENSDLEG00000003712)	NOP53 (ENSDLEG00000003719) #15	EHD2 (ENSDLEG00000003725) #16	BICRA (ENSDLEG00000003735) #17	ZNF541 (ENSDLEG00000003750) #18	NAPA (ENSDLEG00000003763) #19	KPTN (ENSDLEG00000003782) #20	SLC8A2 (ENSDLEG00000003792) #21	MEIS3 (ENSDLEG00000003805) #22	DHX34 (ENSDLEG00000003821) #23	C5AR2 (ENSDLEG00000003852) ##24	C5AR1 (ENSDLEG00000003857) #24	CCDC9 (ENSDLEG00000003861)	BBC3 (ENSDLEG00000003877)	SAE1 (ENSDLEG00000003883) #27	ZC3H4 (ENSDLEG00000003907) #28	TMEM160 (ENSDLEG00000003972) #29	ENSDLEG00000003975 #30	ENSDLEG00000003982 #30	ARHGAP35 (ENSDLEG00000003986) #31	AP2S1 (ENSDLEG00000003991) #32	SLC1A5 (ENSDLEG00000003998) #33	FKRP (ENSDLEG00000004003)	STRN4 (ENSDLEG00000004005) #34
Narwhal	MODERN SPECIES	296	TMEM143 (ENSMMNG00015001449)	EMP3 (ENSMMNG00015001411)	ENSMMNG00015001392	ZSWIM9 (ENSMMNG00015001378)	LIG1 (ENSMMNG00015001221)	CABP5 (ENSMMNG00015001124)	CRX (ENSMMNG00015001105) #14	SELENOW (ENSMMNG00015001091)	NOP53 (ENSMMNG00015001038) #15	EHD2 (ENSMMNG00015000998) #16	BICRA (ENSMMNG00015000944) #17	ZNF541 (ENSMMNG00015000861) #18	NAPA (ENSMMNG00015000780) #19	KPTN (ENSMMNG00015000731) #20	SLC8A2 (ENSMMNG00015000698) #21	MEIS3 (ENSMMNG00015000637) #22	DHX34 (ENSMMNG00015000592) #23	C5AR2 (ENSMMNG00015000578) ##24	C5AR1 (ENSMMNG00015000571) #24	CCDC9 (ENSMMNG00015000542)	BBC3 (ENSMMNG00015000522)	SAE1 (ENSMMNG00015000464) #27	ZC3H4 (ENSMMNG00015000348) #28	TMEM160 (ENSMMNG00015000299) #29	NPAS1 (ENSMMNG00015000269) #30	ARHGAP35 (ENSMMNG00015000238) #31	AP2S1 (ENSMMNG00015000164) #32	SLC1A5 (ENSMMNG00015000079) #33	FKRP (ENSMMNG00015000038)	STRN4 (ENSMMNG00015008395) #34	PRKD2 (ENSMMNG00015008344) #35
Vaquita	MODERN SPECIES	10	TMEM143 (ENSPSNG00000019184)	EMP3 (ENSPSNG00000019298)	ENSPSNG00000019349	ZSWIM9 (ENSPSNG00000019394)	ENSPSNG00000019473	CABP5 (ENSPSNG00000019673)	CRX (ENSPSNG00000019726) #14	SELENOW (ENSPSNG00000019760)	NOP53 (ENSPSNG00000019800) #15	EHD2 (ENSPSNG00000019860) #16	BICRA (ENSPSNG00000019926) #17	ZNF541 (ENSPSNG00000020105) #18	NAPA (ENSPSNG00000020206) #19	KPTN (ENSPSNG00000020252) #20	SLC8A2 (ENSPSNG00000020290) #21	MEIS3 (ENSPSNG00000020466) #22	DHX34 (ENSPSNG00000020581) #23	C5AR2 (ENSPSNG00000020611) ##24	C5AR1 (ENSPSNG00000020623) #24	CCDC9 (ENSPSNG00000020676)	BBC3 (ENSPSNG00000020767)	SAE1 (ENSPSNG00000020821) #27	ZC3H4 (ENSPSNG00000020937) #28	TMEM160 (ENSPSNG00000021070) #29	NPAS1 (ENSPSNG00000021101) #30	ARHGAP35 (ENSPSNG00000021142) #31	AP2S1 (ENSPSNG00000021195) #32	SLC1A5 (ENSPSNG00000021297) #33	FKRP (ENSPSNG00000021515)	STRN4 (ENSPSNG00000021546) #34	PRKD2 (ENSPSNG00000021606) #35
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.w	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.x	ENSGT00940000154432.w	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.x	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432.x.a	ENSGT00940000154432.x.b	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Bos	ANCESTRAL SPECIES	4	ENSGT00940000163003	ENSGT00940000163805.a	ENSGT00940000154432.x.a	ENSGT00940000154432.x.b	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Bos_a	ANCESTRAL SPECIES	16	ENSGT00940000163003	ENSGT00940000163805.a	ENSGT00940000154432.x.b	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000166546	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Domestic yak	MODERN SPECIES	12	ENSBGRG00000024976	BSPH1 (ENSBGRG00000024987)	ENSBGRG00000025019	ENSBGRG00000025027	SULT2A1 (ENSBGRG00000025053)	ENSBGRG00000025166	CRX (ENSBGRG00000025177) #14	ENSBGRG00000025192	NOP53 (ENSBGRG00000025223) #15	EHD2 (ENSBGRG00000025286) #16	BICRA (ENSBGRG00000025303) #17	ZNF541 (ENSBGRG00000025322) #18	NAPA (ENSBGRG00000025359) #19	KPTN (ENSBGRG00000025467) #20	SLC8A2 (ENSBGRG00000025527) #21	MEIS3 (ENSBGRG00000025550) #22	ENSBGRG00000014586	C5AR2 (ENSBGRG00000014720) ##24	C5AR1 (ENSBGRG00000014737) #24	INAFM1 (ENSBGRG00000014787)	CCDC9 (ENSBGRG00000014812)	BBC3 (ENSBGRG00000015056)	SAE1 (ENSBGRG00000015234) #27	ZC3H4 (ENSBGRG00000015678) #28	TMEM160 (ENSBGRG00000015984) #29	NPAS1 (ENSBGRG00000016050) #30	ARHGAP35 (ENSBGRG00000016330) #31	ENSBGRG00000016517 #32	SLC1A5 (ENSBGRG00000016867) #33	FKRP (ENSBGRG00000017133)	STRN4 (ENSBGRG00000017163) #34
Wild yak	MODERN SPECIES	1227									ENSBMUG00000003852	NOP53 (ENSBMUG00000003894) #15	EHD2 (ENSBMUG00000003920) #16	ZNF541 (ENSBMUG00000004011) #18	NAPA (ENSBMUG00000004066) #19	KPTN (ENSBMUG00000004112) #20	SLC8A2 (ENSBMUG00000004136) #21	MEIS3 (ENSBMUG00000004394) #22	DHX34 (ENSBMUG00000004684) #23	C5AR2 (ENSBMUG00000004695) ##24	C5AR1 (ENSBMUG00000004853) #24	INAFM1 (ENSBMUG00000004859)	CCDC9 (ENSBMUG00000004872)	BBC3 (ENSBMUG00000004887)	SAE1 (ENSBMUG00000004945) #27	ZC3H4 (ENSBMUG00000005069) #28	TMEM160 (ENSBMUG00000005100) #29	ENSBMUG00000005105 #30	ARHGAP35 (ENSBMUG00000005114) #31	AP2S1 (ENSBMUG00000005174) #32	SLC1A5 (ENSBMUG00000005207) #33	STRN4 (ENSBMUG00000005225) #34	PRKD2 (ENSBMUG00000005252) #35
Bos_b	ANCESTRAL SPECIES		ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805.a	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Hybrid Bos Indicus	MODERN SPECIES	9	LIG1 (ENSBIXG00005025690)	CABP5 (ENSBIXG00005025628)	ELSPBP1 (ENSBIXG00005025587)	BSPH1 (ENSBIXG00005025552)	ENSBIXG00005025524	SULT2A1 (ENSBIXG00005025492)	CRX (ENSBIXG00005025456) #14	ENSBIXG00005004327	NOP53 (ENSBIXG00005025408) #15	EHD2 (ENSBIXG00005025382) #16	BICRA (ENSBIXG00005025350) #17	ZNF541 (ENSBIXG00005025312) #18	NAPA (ENSBIXG00005025291) #19	KPTN (ENSBIXG00005006855) #20	SLC8A2 (ENSBIXG00005025226) #21	MEIS3 (ENSBIXG00005025204) #22	DHX34 (ENSBIXG00005004281) #23	C5AR2 (ENSBIXG00005025135) ##24	C5AR1 (ENSBIXG00005025115) #24	CCDC9 (ENSBIXG00005025090)	BBC3 (ENSBIXG00005024989)	SAE1 (ENSBIXG00005024933) #27	ZC3H4 (ENSBIXG00005024863) #28	ENSBIXG00005024833 #29	NPAS1 (ENSBIXG00005024813) #30	ARHGAP35 (ENSBIXG00005004231) #31	AP2S1 (ENSBIXG00005024725) #32	SLC1A5 (ENSBIXG00005024582) #33	FKRP (ENSBIXG00005024505)	STRN4 (ENSBIXG00005024484) #34	PRKD2 (ENSBIXG00005024335) #35
Cow	MODERN SPECIES	9	ZSWIM9 (ENSBTAG00000014597)	LIG1 (ENSBTAG00000014595)	CABP5 (ENSBTAG00000016114)	ELSPBP1 (ENSBTAG00000016113)	ENSBTAG00000040054	ENSBTAG00000039971	SULT2A1 (ENSBTAG00000023419)	CRX (ENSBTAG00000021185) #14	NOP53 (ENSBTAG00000021192) #15	EHD2 (ENSBTAG00000021191) #16	BICRA (ENSBTAG00000004138) #17	ZNF541 (ENSBTAG00000012606) #18	NAPA (ENSBTAG00000013084) #19	KPTN (ENSBTAG00000030769) #20	SLC8A2 (ENSBTAG00000010856) #21	MEIS3 (ENSBTAG00000006862) #22	DHX34 (ENSBTAG00000006848) #23	C5AR2 (ENSBTAG00000037735) ##24	C5AR1 (ENSBTAG00000020872) #24	INAFM1 (ENSBTAG00000053132)	CCDC9 (ENSBTAG00000014117)	BBC3 (ENSBTAG00000050313)	SAE1 (ENSBTAG00000002676) #27	ZC3H4 (ENSBTAG00000009286) #28	TMEM160 (ENSBTAG00000015579) #29	NPAS1 (ENSBTAG00000015576) #30	ARHGAP35 (ENSBTAG00000015543) #31	AP2S1 (ENSBTAG00000010584) #32	SLC1A5 (ENSBTAG00000013577) #33	FKRP (ENSBTAG00000050243)	STRN4 (ENSBTAG00000005830) #34
American bison	MODERN SPECIES	3227							CRX (ENSBBBG00000003180) #14	SELENOW (ENSBBBG00000014141)	NOP53 (ENSBBBG00000014154) #15	EHD2 (ENSBBBG00000006945) #16	BICRA (ENSBBBG00000003213) #17	ZNF541 (ENSBBBG00000014201) #18	NAPA (ENSBBBG00000014223) #19	KPTN (ENSBBBG00000014243) #20	SLC8A2 (ENSBBBG00000014252) #21	MEIS3 (ENSBBBG00000009054) #22	DHX34 (ENSBBBG00000014324) #23	C5AR1 (ENSBBBG00000003265) #24	CCDC9 (ENSBBBG00000014362)	BBC3 (ENSBBBG00000014369)	SAE1 (ENSBBBG00000014398) #27	ENSBBBG00000003321 #29	ENSBBBG00000014422 #30	ARHGAP35 (ENSBBBG00000014432) #31	AP2S1 (ENSBBBG00000002880) #32	SLC1A5 (ENSBBBG00000003362) #33	STRN4 (ENSBBBG00000007553) #34	PRKD2 (ENSBBBG00000007407) #35	ENSBBBG00000014572 #36	GNG8 (ENSBBBG00000007169) #37	PTGIR (ENSBBBG00000014585)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000154432.w.a	ENSGT00940000154432.w.b	ENSGT00940000161634 #14	ENSGT00940000161069	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00550000076229	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34
Rambouillet Sheep	MODERN SPECIES	5	LIG1 (ENSOARG00020014185)	CABP5 (ENSOARG00020014100)	ELSPBP1 (ENSOARG00020013971)	BSPH1 (ENSOARG00020013879)	ENSOARG00020013825	SULT2A1 (ENSOARG00020013754)	CRX (ENSOARG00020013684) #14	SELENOW (ENSOARG00020013536)	NOP53 (ENSOARG00020013455) #15	EHD2 (ENSOARG00020013411) #16	BICRA (ENSOARG00020013244) #17	ZNF541 (ENSOARG00020012969) #18	NAPA (ENSOARG00020012824) #19	KPTN (ENSOARG00020012769) #20	SLC8A2 (ENSOARG00020012581) #21	MEIS3 (ENSOARG00020012359) #22	DHX34 (ENSOARG00020012207) #23	C5AR2 (ENSOARG00020012174) ##24	C5AR1 (ENSOARG00020012129) #24	INAFM1 (ENSOARG00020012115)	CCDC9 (ENSOARG00020012051)	BBC3 (ENSOARG00020011954)	SAE1 (ENSOARG00020011750) #27	ZC3H4 (ENSOARG00020011583) #28	TMEM160 (ENSOARG00020011550) #29	NPAS1 (ENSOARG00020011377) #30	ARHGAP35 (ENSOARG00020011291) #31	AP2S1 (ENSOARG00020010737) #32	SLC1A5 (ENSOARG00020010548) #33	FKRP (ENSOARG00020010516)	STRN4 (ENSOARG00020009995) #34
Goat	MODERN SPECIES	9	ZSWIM9 (ENSCHIG00000017474)	LIG1 (ENSCHIG00000025924)	ELSPBP1 (ENSCHIG00000008826)	BSPH1 (ENSCHIG00000022423)	ENSCHIG00000020372	ENSCHIG00000013073	CRX (ENSCHIG00000023022) #14	ENSCHIG00000022860	NOP53 (ENSCHIG00000009393) #15	EHD2 (ENSCHIG00000011896) #16	BICRA (ENSCHIG00000012752) #17	ZNF541 (ENSCHIG00000013773) #18	NAPA (ENSCHIG00000023468) #19	KPTN (ENSCHIG00000019625) #20	SLC8A2 (ENSCHIG00000005606) #21	MEIS3 (ENSCHIG00000013472) #22	DHX34 (ENSCHIG00000024526) #23	C5AR2 (ENSCHIG00000003475) ##24	C5AR1 (ENSCHIG00000016291) #24	INAFM1 (ENSCHIG00000003153)	CCDC9 (ENSCHIG00000008730)	ENSCHIG00000023357	BBC3 (ENSCHIG00000010347)	SAE1 (ENSCHIG00000026570) #27	ZC3H4 (ENSCHIG00000013956) #28	TMEM160 (ENSCHIG00000020208) #29	NPAS1 (ENSCHIG00000006784) #30	ARHGAP35 (ENSCHIG00000024478) #31	AP2S1 (ENSCHIG00000022984) #32	SLC1A5 (ENSCHIG00000020955) #33	FKRP (ENSCHIG00000005654)
Siberian musk deer	MODERN SPECIES	124	LIG1 (ENSMMSG00000000695)	CABP5 (ENSMMSG00000000844)	ELSPBP1 (ENSMMSG00000000869)	ENSMMSG00000000893	ENSMMSG00000000912	ENSMMSG00000000929	CRX (ENSMMSG00000000942) #14	ENSMMSG00000000961	NOP53 (ENSMMSG00000000991) #15	EHD2 (ENSMMSG00000001026) #16	BICRA (ENSMMSG00000001054) #17	ZNF541 (ENSMMSG00000001131) #18	NAPA (ENSMMSG00000001259) #19	KPTN (ENSMMSG00000001314) #20	SLC8A2 (ENSMMSG00000001344) #21	MEIS3 (ENSMMSG00000001373) #22	DHX34 (ENSMMSG00000001413) #23	C5AR2 (ENSMMSG00000001489) ##24	C5AR1 (ENSMMSG00000001497) #24	CCDC9 (ENSMMSG00000001515)	BBC3 (ENSMMSG00000001565)	ENSMMSG00000001602 #27	ZC3H4 (ENSMMSG00000001677) #28	TMEM160 (ENSMMSG00000001690) #29	NPAS1 (ENSMMSG00000001706) #30	ARHGAP35 (ENSMMSG00000001730) #31	AP2S1 (ENSMMSG00000001766) #32	SLC1A5 (ENSMMSG00000001866) #33	FKRP (ENSMMSG00000001899)	STRN4 (ENSMMSG00000001918) #34	PRKD2 (ENSMMSG00000002012) #35
Yarkand deer	MODERN SPECIES	27	LIG1 (ENSCHYG00000020178)	CABP5 (ENSCHYG00000020089)	ELSPBP1 (ENSCHYG00000019986)	ENSCHYG00000019831	ENSCHYG00000019726	SULT2A1 (ENSCHYG00000019298)	CRX (ENSCHYG00000019234) #14	ENSCHYG00000019212	NOP53 (ENSCHYG00000018854) #15	EHD2 (ENSCHYG00000018732) #16	BICRA (ENSCHYG00000018651) #17	ZNF541 (ENSCHYG00000018471) #18	NAPA (ENSCHYG00000018302) #19	KPTN (ENSCHYG00000018196) #20	SLC8A2 (ENSCHYG00000018134) #21	MEIS3 (ENSCHYG00000017783) #22	DHX34 (ENSCHYG00000017576) #23	C5AR2 (ENSCHYG00000017549) ##24	ENSCHYG00000017494	C5AR1 (ENSCHYG00000017464) #24	INAFM1 (ENSCHYG00000017434)	ENSCHYG00000017388	CCDC9 (ENSCHYG00000017076)	ENSCHYG00000017008	SAE1 (ENSCHYG00000016642) #27	ZC3H4 (ENSCHYG00000016192) #28	TMEM160 (ENSCHYG00000016093) #29	NPAS1 (ENSCHYG00000015977) #30	ARHGAP35 (ENSCHYG00000015852) #31	AP2S1 (ENSCHYG00000015644) #32	SLC1A5 (ENSCHYG00000015481) #33
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161057 #22
Hedgehog	MODERN SPECIES	893																ENSEEUG00000006123 #22
Common shrew	MODERN SPECIES	496																ENSSARG00000004351 #22
Atlantogenata	ANCESTRAL SPECIES	48	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000154432	ENSGT00940000163048	ENSGT00940000166546	ENSGT00940000161634 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Xenarthra	ANCESTRAL SPECIES	251				ENSGT00940000163048	ENSGT00940000154432	ENSGT00940000163805	ENSGT00940000166546	ENSGT00940000161634 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.g #24
Armadillo	MODERN SPECIES	3535										ENSDNOG00000043390 #16	BICRA (ENSDNOG00000044109) #17	ZNF541 (ENSDNOG00000049267) #18	NAPA (ENSDNOG00000032517) #19	KPTN (ENSDNOG00000043885) #20	SLC8A2 (ENSDNOG00000024107) #21	MEIS3 (ENSDNOG00000005541) #22	DHX34 (ENSDNOG00000031738) #23	C5AR1 (ENSDNOG00000038763) #24	ENSDNOG00000038380	ENSDNOG00000036704
Afrotheria	ANCESTRAL SPECIES	22	ENSGT00530000063801.b	ENSGT00960000186612.A.b	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Tenrec	MODERN SPECIES	13430																MEIS3 (ENSETEG00000009874) #22
Afrotheria_a	ANCESTRAL SPECIES	21	ENSGT00530000063801.b	ENSGT00960000186612.A.b	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506	ENSGT00940000162766	ENSGT00940000163003	ENSGT00940000163805	ENSGT00940000161634 #14	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h ##24	ENSGT01100000263564.a.g #24	ENSGT00530000063950.a.b	ENSGT00390000002767	ENSGT00550000075007 #27	ENSGT00940000160011 #28	ENSGT00390000012863 #29	ENSGT00940000161295 #30	ENSGT01030000234635.a.b.a.b.b.a.b #31	ENSGT00970000193421.A #32	ENSGT00940000159485 #33	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a #34	ENSGT00950000183024.a.b.b #35
Hyrax	MODERN SPECIES	608																MEIS3 (ENSPCAG00000016512) #22
Elephant	MODERN SPECIES	375	ENSLAFG00000003556	ENSLAFG00000031844	ENSLAFG00000022646	LIG1 (ENSLAFG00000008673)	CABP5 (ENSLAFG00000005327)	ELSPBP1 (ENSLAFG00000017403)	BSPH1 (ENSLAFG00000020529)	ENSLAFG00000028834	CRX (ENSLAFG00000007254) #14	EHD2 (ENSLAFG00000029346) #16	ENSLAFG00000023304 #17	ENSLAFG00000015647 #17	ZNF541 (ENSLAFG00000009287) #18	NAPA (ENSLAFG00000009284) #19	KPTN (ENSLAFG00000009281) #20	MEIS3 (ENSLAFG00000031905) #22	DHX34 (ENSLAFG00000003186) #23	C5AR1 (ENSLAFG00000023333) #24	CCDC9 (ENSLAFG00000026191)	BBC3 (ENSLAFG00000008852)	SAE1 (ENSLAFG00000001593) #27	ZC3H4 (ENSLAFG00000001586) #28	TMEM160 (ENSLAFG00000014543) #29	ARHGAP35 (ENSLAFG00000018311) #31	ENSLAFG00000026512 #32	SLC1A5 (ENSLAFG00000000671) #33	FKRP (ENSLAFG00000025662)	STRN4 (ENSLAFG00000004220) #34	PRKD2 (ENSLAFG00000021718) #35	DACT3 (ENSLAFG00000000449) #36	PTGIR (ENSLAFG00000021881)