Mus	ANCESTRAL SPECIES		ENSGT00940000157783 #8	ENSGT01030000234606.a.b.d #9	ENSGT00940000160506 #10	ENSGT00940000163003 #11	ENSGT00940000163805 #12	ENSGT00940000154432.m.a.c	ENSGT00940000161634 #13	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a ##35	ENSGT01100000263479.D.a.d.a.b #34	ENSGT01100000263479.F #35	ENSGT00970000193421.A #36
Shrew mouse	MODERN SPECIES	10	Zswim9 (MGP_PahariEiJ_G0021066) #7	Lig1 (MGP_PahariEiJ_G0021067) #8	Pla2g4c (MGP_PahariEiJ_G0021068) #9	Cabp5 (MGP_PahariEiJ_G0021069) #10	Bsph1 (MGP_PahariEiJ_G0021070) #11	MGP_PahariEiJ_G0021071 #12	Crx (MGP_PahariEiJ_G0021072) #13	MGP_PahariEiJ_G0021073 #14	MGP_PahariEiJ_G0021074 #15	Ehd2 (MGP_PahariEiJ_G0021075) #16	Bicra (MGP_PahariEiJ_G0021076) #17	Zfp541 (MGP_PahariEiJ_G0021077) #18	Napa (MGP_PahariEiJ_G0021078) #19	Kptn (MGP_PahariEiJ_G0021079) #20	Slc8a2 (MGP_PahariEiJ_G0021080) #21	Meis3 (MGP_PahariEiJ_G0021081) #22	Dhx34 (MGP_PahariEiJ_G0021082) #23	C5ar2 (MGP_PahariEiJ_G0021083) #24	C5ar1 (MGP_PahariEiJ_G0021084) #25	Inafm1 (MGP_PahariEiJ_G0021085) #26	Ccdc9 (MGP_PahariEiJ_G0021086) #27	Bbc3 (MGP_PahariEiJ_G0021087) #28	Sae1 (MGP_PahariEiJ_G0021088) #29	Zc3h4 (MGP_PahariEiJ_G0021089) #30	Tmem160 (MGP_PahariEiJ_G0021090) #31	Npas1 (MGP_PahariEiJ_G0021091) #32	Arhgap35 (MGP_PahariEiJ_G0021092) #33	Ceacam15 (MGP_PahariEiJ_G0021093) #34	Ceacam9 (MGP_PahariEiJ_G0021094) #35	Ap2s1 (MGP_PahariEiJ_G0021095) #36	Slc1a5 (MGP_PahariEiJ_G0021096) #37
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000160506 #10	ENSGT00940000163003 #11	ENSGT00940000163805 #12	ENSGT00940000154432.m.a.c.c	ENSGT00390000000605.B.a	ENSGT00940000161634 #13	ENSGT00800000124482	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a ##35	ENSGT01100000263479.D.a.d.a.b #34	ENSGT01100000263479.F.c #35	ENSGT00970000193421.A #36
Mus_B	ANCESTRAL SPECIES		ENSGT00940000154432.m.a.c.c.b	ENSGT00940000154432.m.a.c.d	ENSGT00390000000605.A	ENSGT00940000154432.m.b	ENSGT00390000000605.B.a.a	ENSGT00940000161634 #13	ENSGT00800000124482.b.a	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a ##35	ENSGT01100000263479.D.a.d.a.b #34	ENSGT01100000263479.F.c #35	ENSGT00970000193421.A #36
Mouse	MODERN SPECIES	16	Obox7 (ENSMUSG00000055942)	Obox2 (ENSMUSG00000074369)	Obox1 (ENSMUSG00000054310)	Obox3 (ENSMUSG00000066772)	Obox5 (ENSMUSG00000074366)	Obox6 (ENSMUSG00000041583)	Crx (ENSMUSG00000041578) #13	Selenow (ENSMUSG00000041571) #14	Nop53 (ENSMUSG00000041560) #15	Ehd2 (ENSMUSG00000074364) #16	Bicra (ENSMUSG00000070808) #17	Zfp541 (ENSMUSG00000078796) #18	Napa (ENSMUSG00000006024) #19	Kptn (ENSMUSG00000006021) #20	Slc8a2 (ENSMUSG00000030376) #21	Meis3 (ENSMUSG00000041420) #22	Dhx34 (ENSMUSG00000006019) #23	C5ar2 (ENSMUSG00000074361) #24	C5ar1 (ENSMUSG00000049130) #25	Inafm1 (ENSMUSG00000091811) #26	Ccdc9 (ENSMUSG00000041375) #27	Bbc3 (ENSMUSG00000002083) #28	Sae1 (ENSMUSG00000052833) #29	Zc3h4 (ENSMUSG00000059273) #30	Tmem160 (ENSMUSG00000019158) #31	Npas1 (ENSMUSG00000001988) #32	Arhgap35 (ENSMUSG00000058230) #33	Ceacam15 (ENSMUSG00000078795) #34	Ceacam9 (ENSMUSG00000007209) #35	Ap2s1 (ENSMUSG00000008036) #36	Slc1a5 (ENSMUSG00000001918) #37
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000154432.m.a.c.d	ENSGT00390000000605.A	ENSGT00940000154432.m.b	ENSGT01030000234553.b.b.c.a.a.b.b.a.b.b	ENSGT00390000000605.B.a.a	ENSGT00940000161634 #13	ENSGT00800000124482.b.a	ENSGT00940000161069 #14	ENSGT00390000017267 #15	ENSGT00940000159256 #16	ENSGT00940000159112.b #17	ENSGT00940000160330 #18	ENSGT00390000005826.a.a #19	ENSGT00390000002548 #20	ENSGT00940000158344.b #21	ENSGT00940000161057 #22	ENSGT00940000158721 #23	ENSGT01100000263564.a.h #24	ENSGT01100000263564.a.g #25	ENSGT00550000076229 #26	ENSGT00530000063950.a.b #27	ENSGT00390000002767 #28	ENSGT00550000075007 #29	ENSGT00940000160011 #30	ENSGT00390000012863 #31	ENSGT00940000161295 #32	ENSGT01030000234635.a.b.a.b.b.a.b #33	ENSGT01100000263479.D.a.d.a.a ##35	ENSGT01100000263479.D.a.d.a.b #34	ENSGT01100000263479.F.c #35	ENSGT00970000193421.A #36
Steppe mouse	MODERN SPECIES	2772					Obox6 (ENSMSIG00000018548)	Crx (ENSMSIG00000018526) #13	ENSMSIG00000018513	Selenow (ENSMSIG00000018481) #14	Nop53 (ENSMSIG00000018430) #15	Ehd2 (ENSMSIG00000018416) #16	Bicra (ENSMSIG00000018350) #17	Zfp541 (ENSMSIG00000018222) #18	Napa (ENSMSIG00000018190) #19	Kptn (ENSMSIG00000018154) #20	Slc8a2 (ENSMSIG00000018129) #21	Meis3 (ENSMSIG00000018072) #22	Dhx34 (ENSMSIG00000017946) #23	C5ar2 (ENSMSIG00000017934) #24	C5ar1 (ENSMSIG00000017926) #25	Ccdc9 (ENSMSIG00000017868) #27	ENSMSIG00000017856 #28	Sae1 (ENSMSIG00000017811) #29	Zc3h4 (ENSMSIG00000017751) #30	Tmem160 (ENSMSIG00000017740) #31	Npas1 (ENSMSIG00000017698) #32	Arhgap35 (ENSMSIG00000017677) #33	ENSMSIG00000017666 ##35	Ceacam15 (ENSMSIG00000017658) #34	ENSMSIG00000017649 #35	ENSMSIG00000017638 #36
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0029210	Obox8 (MGP_CAROLIEiJ_G0029211)	Sult2a8 (MGP_CAROLIEiJ_G0029212)	MGP_CAROLIEiJ_G0029213	Obox6 (MGP_CAROLIEiJ_G0029214)	Crx (MGP_CAROLIEiJ_G0029215) #13	MGP_CAROLIEiJ_G0029216	MGP_CAROLIEiJ_G0029217 #14	Nop53 (MGP_CAROLIEiJ_G0029218) #15	Ehd2 (MGP_CAROLIEiJ_G0029219) #16	Bicra (MGP_CAROLIEiJ_G0029220) #17	Zfp541 (MGP_CAROLIEiJ_G0029221) #18	Napa (MGP_CAROLIEiJ_G0029222) #19	Kptn (MGP_CAROLIEiJ_G0029223) #20	Slc8a2 (MGP_CAROLIEiJ_G0029224) #21	Meis3 (MGP_CAROLIEiJ_G0029225) #22	Dhx34 (MGP_CAROLIEiJ_G0029226) #23	C5ar2 (MGP_CAROLIEiJ_G0029227) #24	C5ar1 (MGP_CAROLIEiJ_G0029228) #25	Inafm1 (MGP_CAROLIEiJ_G0029229) #26	Ccdc9 (MGP_CAROLIEiJ_G0029230) #27	Bbc3 (MGP_CAROLIEiJ_G0029231) #28	Sae1 (MGP_CAROLIEiJ_G0029232) #29	MGP_CAROLIEiJ_G0029233 #30	Tmem160 (MGP_CAROLIEiJ_G0029234) #31	Npas1 (MGP_CAROLIEiJ_G0029235) #32	Arhgap35 (MGP_CAROLIEiJ_G0029236) #33	Ceacam15 (MGP_CAROLIEiJ_G0029237) #34	Ceacam9 (MGP_CAROLIEiJ_G0029238) #35	Ap2s1 (MGP_CAROLIEiJ_G0029239) #36	Slc1a5 (MGP_CAROLIEiJ_G0029240) #37