Vertebrata	ANCESTRAL SPECIES																	ENSGT00390000004493 #22
Gnathostomata	ANCESTRAL SPECIES	11	ENSGT00940000156687.f.a	ENSGT00390000015980	ENSGT00940000164637	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000174128.B	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT01100000263565.b.b	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000163942
Euteleostomi	ANCESTRAL SPECIES	7	ENSGT01100000263515.a.b.a.a	ENSGT00940000174128.B	ENSGT00940000169328.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT01100000263565.b.b	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000163942	ENSGT01100000263565.b.a.b.a	ENSGT01100000263565.b.a.b.b.a.a	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000162467.a.b	ENSGT00390000005492	ENSGT01100000263536.B.d
Sarcopterygii	ANCESTRAL SPECIES	5	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000169328.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT01100000263565.b.b	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT01100000263565.b.a.b.a	ENSGT01100000263565.b.a.b.b.a.a	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Tetrapoda	ANCESTRAL SPECIES	12	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT01100000263565.b.b	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT01100000263536.B.d	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Amniota	ANCESTRAL SPECIES	13	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Mammalia	ANCESTRAL SPECIES	7	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Theria	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Eutheria	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Primates	ANCESTRAL SPECIES	1	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Lemuriformes	ANCESTRAL SPECIES	30	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Mouse lemur	MODERN SPECIES		TRANK1 (ENSMICG00000048569) #7	DCLK3 (ENSMICG00000049233) #8	STAC (ENSMICG00000048960) #9	ENSMICG00000049147 #10	ARPP21 (ENSMICG00000049108) #11	ENSMICG00000049253 #12	ENSMICG00000048912 #13	ENSMICG00000048653 #14	TIPARP (ENSMICG00000049557) #15	SSR3 (ENSMICG00000049476) #16	KCNAB1 (ENSMICG00000049495) #17	ENSMICG00000049259 #18	ENSMICG00000049568 #19	ENSMICG00000049266 #20	SLC33A1 (ENSMICG00000048976) #21	C3orf33 (ENSMICG00000049160) #22	PLCH1 (ENSMICG00000049386) #23	STRIT1 (ENSMICG00000048533) #24	MME (ENSMICG00000049514) #25	GPR149 (ENSMICG00000049352) #26	DHX36 (ENSMICG00000049093) #27	ARHGEF26 (ENSMICG00000049586) #28	RAP2B (ENSMICG00000049585) #29	P2RY1 (ENSMICG00000049127) #30	MBNL1 (ENSMICG00000049530) #31	SUCNR1 (ENSMICG00000049176) #32	AADAC (ENSMICG00000049479) #33	AADACL2 (ENSMICG00000048956) #34	IGSF10 (ENSMICG00000048902) #35	MED12L (ENSMICG00000049284) #36	P2RY12 (ENSMICG00000048971) #37
Lemuriformes_a	ANCESTRAL SPECIES	77	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Coquerels sifaka	MODERN SPECIES	274	GFM1 (ENSPCOG00000022259)	LXN (ENSPCOG00000027480)	MLF1 (ENSPCOG00000024606)	RSRC1 (ENSPCOG00000024048)	SHOX2 (ENSPCOG00000028731)	ENSPCOG00000001436	VEPH1 (ENSPCOG00000018922)	PTX3 (ENSPCOG00000024857)	CCNL1 (ENSPCOG00000015763)	LEKR1 (ENSPCOG00000008154)	TIPARP (ENSPCOG00000018471) #15	SSR3 (ENSPCOG00000017371) #16	KCNAB1 (ENSPCOG00000013343) #17	GMPS (ENSPCOG00000024460) #19	SLC33A1 (ENSPCOG00000021978) #21	C3orf33 (ENSPCOG00000007724) #22	PLCH1 (ENSPCOG00000028591) #23	STRIT1 (ENSPCOG00000015379) #24	MME (ENSPCOG00000013543) #25	GPR149 (ENSPCOG00000027399) #26	ENSPCOG00000011695 #27	ARHGEF26 (ENSPCOG00000012536) #28	ENSPCOG00000022566	RAP2B (ENSPCOG00000009740) #29	P2RY1 (ENSPCOG00000026439) #30	MBNL1 (ENSPCOG00000023511) #31	SUCNR1 (ENSPCOG00000019814) #32	AADACL2 (ENSPCOG00000003911) #34	IGSF10 (ENSPCOG00000018106) #35	MED12L (ENSPCOG00000020951) #36	P2RY12 (ENSPCOG00000011471) #37
Greater bamboo lemur	MODERN SPECIES	448			SHOX2 (ENSPSMG00000001995)	ENSPSMG00000002005	VEPH1 (ENSPSMG00000002055)	PTX3 (ENSPSMG00000002124)	CCNL1 (ENSPSMG00000002156)	LEKR1 (ENSPSMG00000002201)	ENSPSMG00000002207	TIPARP (ENSPSMG00000002213) #15	SSR3 (ENSPSMG00000002232) #16	KCNAB1 (ENSPSMG00000002464) #17	ENSPSMG00000002894	GMPS (ENSPSMG00000003004) #19	ENSPSMG00000003046 #21	C3orf33 (ENSPSMG00000003083) #22	PLCH1 (ENSPSMG00000003152) #23	STRIT1 (ENSPSMG00000003191) #24	MME (ENSPSMG00000003300) #25	GPR149 (ENSPSMG00000003410) #26	DHX36 (ENSPSMG00000003457) #27	ARHGEF26 (ENSPSMG00000003482) #28	RAP2B (ENSPSMG00000003499) #29	ENSPSMG00000003506	P2RY1 (ENSPSMG00000003519) #30	ENSPSMG00000003526	MBNL1 (ENSPSMG00000003701) #31	SUCNR1 (ENSPSMG00000004001) #32	AADAC (ENSPSMG00000004101) #33	AADACL2 (ENSPSMG00000004164) #34	IGSF10 (ENSPSMG00000004167) #35
Bushbaby	MODERN SPECIES	191	GFM1 (ENSOGAG00000008298)	MLF1 (ENSOGAG00000008294)	ENSOGAG00000025716	ENSOGAG00000008290	SHOX2 (ENSOGAG00000008288)	PTX3 (ENSOGAG00000007529)	VEPH1 (ENSOGAG00000007526)	CCNL1 (ENSOGAG00000011592)	ENSOGAG00000016012	TIPARP (ENSOGAG00000003455) #15	SSR3 (ENSOGAG00000010589) #16	KCNAB1 (ENSOGAG00000010587) #17	ENSOGAG00000028827	GMPS (ENSOGAG00000008523) #19	SLC33A1 (ENSOGAG00000008518) #21	C3orf33 (ENSOGAG00000014996) #22	PLCH1 (ENSOGAG00000031120) #23	MME (ENSOGAG00000010918) #25	GPR149 (ENSOGAG00000011263) #26	DHX36 (ENSOGAG00000011256) #27	ARHGEF26 (ENSOGAG00000011252) #28	RAP2B (ENSOGAG00000033694) #29	P2RY1 (ENSOGAG00000030721) #30	MBNL1 (ENSOGAG00000032201) #31	SUCNR1 (ENSOGAG00000000482) #32	ENSOGAG00000014492 #33	ENSOGAG00000009739 #33
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Hominidae	ANCESTRAL SPECIES	2	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35
Pan	ANCESTRAL SPECIES	2	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000154281.m.b.a.a.b.a	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000017288.d	ENSGT00390000008647.e.a.a.a.b.a.a	ENSGT00940000154891.g.a.b.a.a	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00950000183755	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33
Chimpanzee	MODERN SPECIES	16	SLC66A1L (ENSPTRG00000015566)	PTX3 (ENSPTRG00000015565)	VEPH1 (ENSPTRG00000022665)	CCNL1 (ENSPTRG00000015563)	LEKR1 (ENSPTRG00000024220)	ENSPTRG00000040050	TIPARP (ENSPTRG00000015561) #15	SSR3 (ENSPTRG00000048398) #16	KCNAB1 (ENSPTRG00000044809) #17	ENSPTRG00000051749	ENSPTRG00000052355	ENSPTRG00000041304	ENSPTRG00000032585	GMPS (ENSPTRG00000015555) #19	SLC33A1 (ENSPTRG00000015554) #21	C3H3orf33 (ENSPTRG00000015553) #22	PLCH1 (ENSPTRG00000015551) #23	ENSPTRG00000045319	STRIT1 (ENSPTRG00000051466) #24	MME (ENSPTRG00000015550) #25	ENSPTRG00000045019	ENSPTRG00000044913	GPR149 (ENSPTRG00000015549) #26	DHX36 (ENSPTRG00000015548) #27	ARHGEF26 (ENSPTRG00000015546) #28	RAP2B (ENSPTRG00000052751) #29	ENSPTRG00000043810	ENSPTRG00000042826	P2RY1 (ENSPTRG00000015543) #30	MBNL1 (ENSPTRG00000015542) #31	SUCNR1 (ENSPTRG00000030092) #32
Bonobo	MODERN SPECIES	16	RSRC1 (ENSPPAG00000034990)	SHOX2 (ENSPPAG00000022372)	PTX3 (ENSPPAG00000035181)	VEPH1 (ENSPPAG00000034788)	CCNL1 (ENSPPAG00000033713)	LEKR1 (ENSPPAG00000028869)	ENSPPAG00000033599	TIPARP (ENSPPAG00000029528) #15	SSR3 (ENSPPAG00000034664) #16	KCNAB1 (ENSPPAG00000030046) #17	ENSPPAG00000031413	ENSPPAG00000008889	ENSPPAG00000031281	GMPS (ENSPPAG00000042787) #19	SLC33A1 (ENSPPAG00000028834) #21	C3orf33 (ENSPPAG00000040302) #22	PLCH1 (ENSPPAG00000015015) #23	ENSPPAG00000037955	STRIT1 (ENSPPAG00000028301) #24	MME (ENSPPAG00000019817) #25	SLC43A3 (ENSPPAG00000028764)	PRG2 (ENSPPAG00000005293)	PRG3 (ENSPPAG00000039813)	P2RX3 (ENSPPAG00000037750)	SSRP1 (ENSPPAG00000039088)	TNKS1BP1 (ENSPPAG00000039200)	APLNR (ENSPPAG00000007352)	LRRC55 (ENSPPAG00000030647)	OR5AK2 (ENSPPAG00000006294)	OR5AK3P (ENSPPAG00000008152)	ENSPPAG00000033428
Human	MODERN SPECIES	15	RARRES1 (ENSG00000118849)	LXN (ENSG00000079257)	GFM1 (ENSG00000168827)	MLF1 (ENSG00000178053)	RSRC1 (ENSG00000174891)	SHOX2 (ENSG00000168779)	PTX3 (ENSG00000163661)	VEPH1 (ENSG00000197415)	CCNL1 (ENSG00000163660)	LEKR1 (ENSG00000197980)	TIPARP (ENSG00000163659) #15	SSR3 (ENSG00000114850) #16	KCNAB1 (ENSG00000169282) #17	GMPS (ENSG00000163655) #19	SLC33A1 (ENSG00000169359) #21	C3orf33 (ENSG00000174928) #22	PLCH1 (ENSG00000114805) #23	STRIT1 (ENSG00000240045) #24	MME (ENSG00000196549) #25	GPR149 (ENSG00000174948) #26	DHX36 (ENSG00000174953) #27	ARHGEF26 (ENSG00000114790) #28	RAP2B (ENSG00000181467) #29	P2RY1 (ENSG00000169860) #30	MBNL1 (ENSG00000152601) #31	SUCNR1 (ENSG00000198829) #32	AADAC (ENSG00000114771) #33	AADACL2 (ENSG00000197953) #34	IGSF10 (ENSG00000152580) #35	P2RY12 (ENSG00000169313) #37	P2RY13 (ENSG00000181631) ##37
Gorilla	MODERN SPECIES	16	RSRC1 (ENSGGOG00000042322)	SHOX2 (ENSGGOG00000011637)	ENSGGOG00000028322	PTX3 (ENSGGOG00000015338)	VEPH1 (ENSGGOG00000034894)	CCNL1 (ENSGGOG00000006249)	LEKR1 (ENSGGOG00000025297)	TIPARP (ENSGGOG00000026270) #15	SSR3 (ENSGGOG00000024038) #16	ENSGGOG00000023817	KCNAB1 (ENSGGOG00000007488) #17	ENSGGOG00000024916	ENSGGOG00000041405	GMPS (ENSGGOG00000017082) #19	SLC33A1 (ENSGGOG00000013029) #21	C3orf33 (ENSGGOG00000024967) #22	ENSGGOG00000038553	ENSGGOG00000039947	PLCH1 (ENSGGOG00000009552) #23	ENSGGOG00000039851	STRIT1 (ENSGGOG00000037301) #24	MME (ENSGGOG00000013260) #25	ENSGGOG00000022568	GPR149 (ENSGGOG00000001655) #26	DHX36 (ENSGGOG00000034937) #27	ARHGEF26 (ENSGGOG00000009951) #28	RAP2B (ENSGGOG00000041894) #29	ENSGGOG00000039329	ENSGGOG00000039036	P2RY1 (ENSGGOG00000000031) #30	MBNL1 (ENSGGOG00000009430) #31
Orangutan	MODERN SPECIES	16	GFM1 (ENSPPYG00000014244)	MLF1 (ENSPPYG00000037889)	RSRC1 (ENSPPYG00000014242)	SHOX2 (ENSPPYG00000032262)	ENSPPYG00000040849	PTX3 (ENSPPYG00000014239)	VEPH1 (ENSPPYG00000014238)	CCNL1 (ENSPPYG00000014237)	LEKR1 (ENSPPYG00000014236)	ENSPPYG00000032921	TIPARP (ENSPPYG00000014234) #15	SSR3 (ENSPPYG00000014233) #16	KCNAB1 (ENSPPYG00000014232) #17	GMPS (ENSPPYG00000014229) #19	SLC33A1 (ENSPPYG00000014228) #21	C3orf33 (ENSPPYG00000014227) #22	PLCH1 (ENSPPYG00000014225) #23	STRIT1 (ENSPPYG00000039457) #24	MME (ENSPPYG00000014224) #25	GPR149 (ENSPPYG00000014223) #26	DHX36 (ENSPPYG00000014222) #27	ARHGEF26 (ENSPPYG00000014221) #28	RAP2B (ENSPPYG00000014220) #29	P2RY1 (ENSPPYG00000014219) #30	MBNL1 (ENSPPYG00000014218) #31	SUCNR1 (ENSPPYG00000030493) #32	AADAC (ENSPPYG00000041034) #33	AADACL2 (ENSPPYG00000014217) #34	IGSF10 (ENSPPYG00000014216) #35	P2RY12 (ENSPPYG00000014215) #37	P2RY13 (ENSPPYG00000014214) ##37
Gibbon	MODERN SPECIES	1	RSRC1 (ENSNLEG00000004137)	SHOX2 (ENSNLEG00000004124)	ENSNLEG00000004110	PTX3 (ENSNLEG00000004099)	VEPH1 (ENSNLEG00000004031)	CCNL1 (ENSNLEG00000003998)	LEKR1 (ENSNLEG00000003993)	ENSNLEG00000028927	TIPARP (ENSNLEG00000003977) #15	SSR3 (ENSNLEG00000003961) #16	ENSNLEG00000029311	KCNAB1 (ENSNLEG00000028736) #17	ENSNLEG00000034563	GMPS (ENSNLEG00000003856) #19	SLC33A1 (ENSNLEG00000031523) #21	C3orf33 (ENSNLEG00000032487) #22	PLCH1 (ENSNLEG00000003776) #23	ENSNLEG00000030011	STRIT1 (ENSNLEG00000028242) #24	MME (ENSNLEG00000003737) #25	ENSNLEG00000035506	GPR149 (ENSNLEG00000003727) #26	DHX36 (ENSNLEG00000003640) #27	ARHGEF26 (ENSNLEG00000003599) #28	RAP2B (ENSNLEG00000030720) #29	P2RY1 (ENSNLEG00000018933) #30	MBNL1 (ENSNLEG00000003537) #31	SUCNR1 (ENSNLEG00000003536) #32	AADAC (ENSNLEG00000031553) #33	AADACL2 (ENSNLEG00000003525) #34	IGSF10 (ENSNLEG00000003516) #35
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.u #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Macaca	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.u #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00910000148059	ENSGT00390000017288.d	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Pig-tailed macaque	MODERN SPECIES	147	MLF1 (ENSMNEG00000037020)	RSRC1 (ENSMNEG00000037212)	SHOX2 (ENSMNEG00000044817)	ENSMNEG00000013326	VEPH1 (ENSMNEG00000032781)	PTX3 (ENSMNEG00000032162)	CCNL1 (ENSMNEG00000042991)	LEKR1 (ENSMNEG00000032090)	TIPARP (ENSMNEG00000041085) #15	SSR3 (ENSMNEG00000043849) #16	KCNAB1 (ENSMNEG00000030568) #17	ENSMNEG00000038579	ENSMNEG00000037898	GMPS (ENSMNEG00000029760) #19	SLC33A1 (ENSMNEG00000041243) #21	C3orf33 (ENSMNEG00000039740) #22	PLCH1 (ENSMNEG00000041537) #23	STRIT1 (ENSMNEG00000034812) #24
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00950000183087.A.a.b.b.g.e.b.b.b.b.a	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.u #16	ENSGT00940000156760 #17	ENSGT00390000017288.d	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01100000263493.a.a.b.a.b.a.a.b.a
Rhesus	MODERN SPECIES	11	RSRC1 (ENSMMUG00000004956)	SHOX2 (ENSMMUG00000019030)	ENSMMUG00000051699	SLC66A1L (ENSMMUG00000012046)	PTX3 (ENSMMUG00000062582)	VEPH1 (ENSMMUG00000022848)	CCNL1 (ENSMMUG00000016497)	ENSMMUG00000058575	LEKR1 (ENSMMUG00000016495)	TIPARP (ENSMMUG00000000366) #15	SSR3 (ENSMMUG00000016970) #16	KCNAB1 (ENSMMUG00000016968) #17	ENSMMUG00000062803	GMPS (ENSMMUG00000007324) #19	SLC33A1 (ENSMMUG00000040085) #21	C2H3orf33 (ENSMMUG00000049932) #22	PLCH1 (ENSMMUG00000018341) #23	STRIT1 (ENSMMUG00000060633) #24	MME (ENSMMUG00000006662) #25	GPR149 (ENSMMUG00000056924) #26	DHX36 (ENSMMUG00000011347) #27	ARHGEF26 (ENSMMUG00000009036) #28	RAP2B (ENSMMUG00000015779) #29	ENSMMUG00000031543	P2RY1 (ENSMMUG00000031540) #30	MBNL1 (ENSMMUG00000015910) #31	ENSMMUG00000061194	SUCNR1 (ENSMMUG00000060077) #32	AADAC (ENSMMUG00000001664) #33	AADACL2 (ENSMMUG00000018774) #34	ENSMMUG00000031537
Crab-eating macaque	MODERN SPECIES	11	MLF1 (ENSMFAG00000032723)	RSRC1 (ENSMFAG00000006023)	SHOX2 (ENSMFAG00000029366)	ENSMFAG00000011761	ENSMFAG00000002259	PTX3 (ENSMFAG00000040863)	VEPH1 (ENSMFAG00000043410)	CCNL1 (ENSMFAG00000030104)	LEKR1 (ENSMFAG00000032575)	TIPARP (ENSMFAG00000040611) #15	SSR3 (ENSMFAG00000065033) #16	KCNAB1 (ENSMFAG00000032077) #17	ENSMFAG00000035446	GMPS (ENSMFAG00000039350) #19	SLC33A1 (ENSMFAG00000057969) #21	C3orf33 (ENSMFAG00000004239) #22	ENSMFAG00000039668	PLCH1 (ENSMFAG00000042166) #23	STRIT1 (ENSMFAG00000039645) #24	MME (ENSMFAG00000039633) #25	GPR149 (ENSMFAG00000030860) #26	DHX36 (ENSMFAG00000032288) #27	ARHGEF26 (ENSMFAG00000031011) #28	RAP2B (ENSMFAG00000006078) #29	P2RY1 (ENSMFAG00000005982) #30	ENSMFAG00000039510	ENSMFAG00000064185	MBNL1 (ENSMFAG00000001066) #31	SUCNR1 (ENSMFAG00000064553) #32	AADACL2 (ENSMFAG00000042922) #34	ENSMFAG00000058559
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660.e	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.u #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00910000148059	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Cercopithecinae_d	ANCESTRAL SPECIES	81	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660.e	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.u #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00910000148059	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Sooty mangabey	MODERN SPECIES	99	RSRC1 (ENSCATG00000036643)	SHOX2 (ENSCATG00000036242)	ENSCATG00000011015	PTX3 (ENSCATG00000039761)	VEPH1 (ENSCATG00000029319)	CCNL1 (ENSCATG00000035386)	LEKR1 (ENSCATG00000045022)	TIPARP (ENSCATG00000030375) #15	SSR3 (ENSCATG00000044932) #16	ENSCATG00000037986	KCNAB1 (ENSCATG00000015065) #17	ENSCATG00000039951	ENSCATG00000022003	GMPS (ENSCATG00000031121) #19	SLC33A1 (ENSCATG00000034638) #21	C3orf33 (ENSCATG00000030263) #22	PLCH1 (ENSCATG00000043865) #23	ENSCATG00000045341	STRIT1 (ENSCATG00000043299) #24	MME (ENSCATG00000038410) #25	ENSCATG00000039259	GPR149 (ENSCATG00000027247) #26	DHX36 (ENSCATG00000037545) #27	ARHGEF26 (ENSCATG00000003554) #28	RAP2B (ENSCATG00000022021) #29	ENSCATG00000021763	P2RY1 (ENSCATG00000018152) #30	MBNL1 (ENSCATG00000042844) #31	SUCNR1 (ENSCATG00000042069) #32	AADAC (ENSCATG00000013681) #33	AADACL2 (ENSCATG00000036536) #34
Drill	MODERN SPECIES	1253									TIPARP (ENSMLEG00000043232) #15	ENSMLEG00000016223 #16	KCNAB1 (ENSMLEG00000038935) #17	ENSMLEG00000028241	ENSMLEG00000010425	ENSMLEG00000035612 #19	SLC33A1 (ENSMLEG00000035020) #21	C3orf33 (ENSMLEG00000008346) #22	PLCH1 (ENSMLEG00000038044) #23	ENSMLEG00000041649	STRIT1 (ENSMLEG00000032440) #24	MME (ENSMLEG00000041566) #25
Olive baboon	MODERN SPECIES	11	SHOX2 (ENSPANG00000008663)	ENSPANG00000008659	ENSPANG00000037645	ENSPANG00000038418	ENSPANG00000006508	VEPH1 (ENSPANG00000010193)	PTX3 (ENSPANG00000015656)	CCNL1 (ENSPANG00000015798)	LEKR1 (ENSPANG00000006077)	TIPARP (ENSPANG00000007235) #15	ENSPANG00000006131 #16	KCNAB1 (ENSPANG00000015726) #17	ENSPANG00000029453	GMPS (ENSPANG00000017625) #19	SLC33A1 (ENSPANG00000015696) #21	C3orf33 (ENSPANG00000011556) #22	PLCH1 (ENSPANG00000020169) #23	ENSPANG00000034846	STRIT1 (ENSPANG00000034540) #24	MME (ENSPANG00000005579) #25	GPR149 (ENSPANG00000010538) #26	DHX36 (ENSPANG00000007914) #27	ARHGEF26 (ENSPANG00000022038) #28	ENSPANG00000041442	RAP2B (ENSPANG00000009630) #29	ENSPANG00000043948	ENSPANG00000005554	P2RY1 (ENSPANG00000003462) #30	MBNL1 (ENSPANG00000024746) #31	ENSPANG00000045690	ENSPANG00000045764
Vervet Monkey	MODERN SPECIES	6	LXN (ENSCSAG00000012154)	MLF1 (ENSCSAG00000012151)	RSRC1 (ENSCSAG00000012145)	SHOX2 (ENSCSAG00000012131)	ENSCSAG00000012112	VEPH1 (ENSCSAG00000012098)	PTX3 (ENSCSAG00000012090)	CCNL1 (ENSCSAG00000012077)	LEKR1 (ENSCSAG00000012071)	ENSCSAG00000012064 #14	TIPARP (ENSCSAG00000012060) #15	ENSCSAG00000012048 #16	KCNAB1 (ENSCSAG00000012031) #17	GMPS (ENSCSAG00000012022) #19	SLC33A1 (ENSCSAG00000012012) #21	C3orf33 (ENSCSAG00000012008) #22	ENSCSAG00000012000 #23	MME (ENSCSAG00000011987) #25	GPR149 (ENSCSAG00000011972) #26	DHX36 (ENSCSAG00000011962) #27	ARHGEF26 (ENSCSAG00000011952) #28	RAP2B (ENSCSAG00000018898) #29	MBNL1 (ENSCSAG00000011943) #31	SUCNR1 (ENSCSAG00000011937) #32	AADAC (ENSCSAG00000011936) #33	AADACL2 (ENSCSAG00000011925) #34	IGSF10 (ENSCSAG00000011903) #35	MED12L (ENSCSAG00000011846) #36	P2RY12 (ENSCSAG00000018899) #37	P2RY13 (ENSCSAG00000011681) ##37	GPR87 (ENSCSAG00000011679) ##37
Rhinopithecus	ANCESTRAL SPECIES	257	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.p.a #16	ENSGT00940000156760 #17	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22
Golden snub-nosed monkey	MODERN SPECIES	1252				PTX3 (ENSRROG00000035614)	VEPH1 (ENSRROG00000039187)	CCNL1 (ENSRROG00000034433)	LEKR1 (ENSRROG00000044541)	TIPARP (ENSRROG00000041667) #15	SSR3 (ENSRROG00000037341) #16	ENSRROG00000030984	KCNAB1 (ENSRROG00000003220) #17	ENSRROG00000002902	GMPS (ENSRROG00000035915) #19	SLC33A1 (ENSRROG00000040669) #21	ENSRROG00000036896	C3orf33 (ENSRROG00000033959) #22	ENSRROG00000033946
Black snub-nosed monkey	MODERN SPECIES	154										ENSRBIG00000036028 #16	KCNAB1 (ENSRBIG00000036516) #17	ENSRBIG00000042112	ENSRBIG00000015935	GMPS (ENSRBIG00000019515) #19	SLC33A1 (ENSRBIG00000041101) #21	C3orf33 (ENSRBIG00000044890) #22	NSUN3 (ENSRBIG00000031551)	ARL13B (ENSRBIG00000005607)	STX19 (ENSRBIG00000036539)	PROS1 (ENSRBIG00000028014)
Platyrrhini	ANCESTRAL SPECIES	22	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251.a	ENSGT00730000111251.b	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.n.a.a #16	ENSGT00940000156760 #17	ENSGT00390000006591.d #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586
Cebidae	ANCESTRAL SPECIES	22	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251.b	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.n.a.b #16	ENSGT00940000156760 #17	ENSGT00390000006591.d #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Cebidae_a	ANCESTRAL SPECIES	12	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251.b	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b.n.a.b #16	ENSGT00940000156760 #17	ENSGT00390000006591.d #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT00390000013091.q.a	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35
Capuchin	MODERN SPECIES	25	IAPP (ENSCCAG00000020992)	SLCO1A2 (ENSCCAG00000027720)	ENSCCAG00000033442	SLCO1B1 (ENSCCAG00000032141)	ENSCCAG00000020147	ENSCCAG00000037892	ENSCCAG00000006745	SLC35E3 (ENSCCAG00000031394)	NUP107 (ENSCCAG00000018046)	RAP1B (ENSCCAG00000034811)	TIPARP (ENSCCAG00000029051) #15	ENSCCAG00000033345 #16	KCNAB1 (ENSCCAG00000026437) #17	ENSCCAG00000031267 #19	SLC33A1 (ENSCCAG00000036825) #21	C3orf33 (ENSCCAG00000020896) #22	PLCH1 (ENSCCAG00000027178) #23	ENSCCAG00000028512	STRIT1 (ENSCCAG00000034361) #24	MME (ENSCCAG00000033778) #25	GPR149 (ENSCCAG00000037844) #26	DHX36 (ENSCCAG00000035199) #27	ARHGEF26 (ENSCCAG00000025030) #28	ENSCCAG00000028759	ENSCCAG00000030504	RAP2B (ENSCCAG00000019904) #29	P2RY1 (ENSCCAG00000001488) #30	MBNL1 (ENSCCAG00000036732) #31	ENSCCAG00000033295	SUCNR1 (ENSCCAG00000036210) #32	AADAC (ENSCCAG00000029588) #33
Bolivian squirrel monkey	MODERN SPECIES	54	GFM1 (ENSSBOG00000023252)	LXN (ENSSBOG00000034211)	MLF1 (ENSSBOG00000024403)	RSRC1 (ENSSBOG00000027990)	SHOX2 (ENSSBOG00000035166)	ENSSBOG00000021272	VEPH1 (ENSSBOG00000027631)	PTX3 (ENSSBOG00000030163)	CCNL1 (ENSSBOG00000035767)	LEKR1 (ENSSBOG00000035709)	TIPARP (ENSSBOG00000030511) #15	ENSSBOG00000036066 #16	KCNAB1 (ENSSBOG00000022593) #17	GMPS (ENSSBOG00000033046) #19	SLC33A1 (ENSSBOG00000022127) #21	C3orf33 (ENSSBOG00000022745) #22	PLCH1 (ENSSBOG00000035699) #23	ENSSBOG00000005590 ##18	STRIT1 (ENSSBOG00000010194) #24	ENSSBOG00000028023	MME (ENSSBOG00000016144) #25	GPR149 (ENSSBOG00000019206) #26	ENSSBOG00000014186	DHX36 (ENSSBOG00000024666) #27	ARHGEF26 (ENSSBOG00000019075) #28	RAP2B (ENSSBOG00000010993) #29	P2RY1 (ENSSBOG00000017142) #30	MBNL1 (ENSSBOG00000020980) #31	ENSSBOG00000036049	SUCNR1 (ENSSBOG00000035745) #32	AADAC (ENSSBOG00000018433) #33
Marmoset	MODERN SPECIES	8	SHOX2 (ENSCJAG00000073951)	ENSCJAG00000084466	ENSCJAG00000022309	ENSCJAG00000043693	VEPH1 (ENSCJAG00000004747)	PTX3 (ENSCJAG00000004771)	CCNL1 (ENSCJAG00000004692)	LEKR1 (ENSCJAG00000004676)	TIPARP (ENSCJAG00000004657) #15	ENSCJAG00000045770 #16	KCNAB1 (ENSCJAG00000004577) #17	ENSCJAG00000065233	ENSCJAG00000001100	GMPS (ENSCJAG00000000863) #19	SLC33A1 (ENSCJAG00000000902) #21	C3orf33 (ENSCJAG00000000910) #22	PLCH1 (ENSCJAG00000000917) #23	ENSCJAG00000078846	ENSCJAG00000072151	ENSCJAG00000073626	STRIT1 (ENSCJAG00000042341) #24	MME (ENSCJAG00000000959) #25	GPR149 (ENSCJAG00000000982) #26	DHX36 (ENSCJAG00000000986) #27	ARHGEF26 (ENSCJAG00000001036) #28	ENSCJAG00000075144	P2RY1 (ENSCJAG00000046851) #30	MBNL1 (ENSCJAG00000040560) #31	SUCNR1 (ENSCJAG00000064247) #32	AADAC (ENSCJAG00000001084) #33	ENSCJAG00000051341 #33
Mas night monkey	MODERN SPECIES	400	LXN (ENSANAG00000024771)	MLF1 (ENSANAG00000026540)	ENSANAG00000029278	SHOX2 (ENSANAG00000013863)	ENSANAG00000036049	VEPH1 (ENSANAG00000020731)	PTX3 (ENSANAG00000021902)	ENSANAG00000037179	CCNL1 (ENSANAG00000035618)	LEKR1 (ENSANAG00000025264)	TIPARP (ENSANAG00000036588) #15	ENSANAG00000025983 #16	KCNAB1 (ENSANAG00000032104) #17	ENSANAG00000036394 #19	SLC33A1 (ENSANAG00000036331) #21	C3orf33 (ENSANAG00000037818) #22	PLCH1 (ENSANAG00000037829) #23	ENSANAG00000026678	STRIT1 (ENSANAG00000035345) #24
Tarsier	MODERN SPECIES	5499															SLC33A1 (ENSTSYG00000006999) #21	C3orf33 (ENSTSYG00000002939) #22	PLCH1 (ENSTSYG00000007326) #23
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Tree shrew	MODERN SPECIES	3998														GMPS (ENSTBEG00000000630) #19	SLC33A1 (ENSTBEG00000000568) #21	C3orf33 (ENSTBEG00000000470) #22
Glires	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Lagomorpha	ANCESTRAL SPECIES	6	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01080000259023	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT01060000248592.C ##37	ENSGT01060000248589.B	ENSGT00440000037505.a #36	ENSGT00850000132319.a.a.a	ENSGT00940000162644
Rabbit	MODERN SPECIES	5	SHOX2 (ENSOCUG00000029123)	ENSOCUG00000035608	PTX3 (ENSOCUG00000010142)	VEPH1 (ENSOCUG00000010133)	CCNL1 (ENSOCUG00000003451)	ENSOCUG00000034465	LEKR1 (ENSOCUG00000011073)	TIPARP (ENSOCUG00000014910) #15	SSR3 (ENSOCUG00000007898) #16	ENSOCUG00000011704	KCNAB1 (ENSOCUG00000007885) #17	ENSOCUG00000002314	ENSOCUG00000002317	GMPS (ENSOCUG00000001480) #19	SLC33A1 (ENSOCUG00000001478) #21	C3orf33 (ENSOCUG00000017756) #22	PLCH1 (ENSOCUG00000009260) #23	ENSOCUG00000029864	ENSOCUG00000030899	ENSOCUG00000036761	MME (ENSOCUG00000017924) #25	ENSOCUG00000038376	DHX36 (ENSOCUG00000001180) #27	ARHGEF26 (ENSOCUG00000001179) #28	ENSOCUG00000036257	ENSOCUG00000027959	RAP2B (ENSOCUG00000014398) #29	P2RY1 (ENSOCUG00000010828) #30	ENSOCUG00000024369	MBNL1 (ENSOCUG00000007601) #31	ENSOCUG00000034635
Rodentia	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Myomorpha	ANCESTRAL SPECIES	38	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Muroidea	ANCESTRAL SPECIES	44	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a	ENSGT00940000158290 #35
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.a
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b.a	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.a
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b.a	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.a	ENSGT00940000158290 #35
Chinese hamster chok1gshd	MODERN SPECIES	352	Shox2 (ENSCGRG00001011092)	Veph1 (ENSCGRG00001013806)	Ptx3 (ENSCGRG00001000361)	ENSCGRG00001019867	Ccnl1 (ENSCGRG00001000165)	ENSCGRG00001012986	ENSCGRG00001018287	Tiparp (ENSCGRG00001011123) #15	Ssr3 (ENSCGRG00001019723) #16	Kcnab1 (ENSCGRG00001005457) #17	ENSCGRG00001005615	ENSCGRG00001017013	Vmn2r1 (ENSCGRG00001023200)	Gmps (ENSCGRG00001018772) #19	Slc33a1 (ENSCGRG00001018761) #21	E130311K13Rik (ENSCGRG00001024290) #22	Plch1 (ENSCGRG00001000217) #23	ENSCGRG00001021700	ENSCGRG00001022762	Mme (ENSCGRG00001000828) #25	ENSCGRG00001008438	ENSCGRG00001007190	Gpr149 (ENSCGRG00001013143) #26	Dhx36 (ENSCGRG00001013722) #27	Arhgef26 (ENSCGRG00001017827) #28	Rap2b (ENSCGRG00001008789) #29	P2ry1 (ENSCGRG00001004469) #30	Mbnl1 (ENSCGRG00001007139) #31	Sucnr1 (ENSCGRG00001017063) #32	Aadac (ENSCGRG00001018575) #33	Aadacl2 (ENSCGRG00001019320) #34
Golden Hamster	MODERN SPECIES	694	ENSMAUG00000010396	Lxn (ENSMAUG00000005608)	Gfm1 (ENSMAUG00000000611)	ENSMAUG00000014811	Rsrc1 (ENSMAUG00000012551)	Shox2 (ENSMAUG00000010791)	Ptx3 (ENSMAUG00000013157)	Veph1 (ENSMAUG00000011592)	Ccnl1 (ENSMAUG00000010127)	ENSMAUG00000008702 #14	Tiparp (ENSMAUG00000013170) #15	Ssr3 (ENSMAUG00000012131) #16	Kcnab1 (ENSMAUG00000008327) #17	Gmps (ENSMAUG00000009597) #19	Slc33a1 (ENSMAUG00000007872) #21	E130311K13Rik (ENSMAUG00000016143) #22	Plch1 (ENSMAUG00000015272) #23	ENSMAUG00000010321	Mme (ENSMAUG00000005415) #25	Gpr149 (ENSMAUG00000002545) #26	Dhx36 (ENSMAUG00000000158) #27	Arhgef26 (ENSMAUG00000020238) #28	Rap2b (ENSMAUG00000017777) #29	P2ry1 (ENSMAUG00000017609) #30	Mbnl1 (ENSMAUG00000004011) #31	Sucnr1 (ENSMAUG00000019748) #32	Aadac (ENSMAUG00000018889) #33	Aadacl2 (ENSMAUG00000007333) #34	Aadacl2fm1 (ENSMAUG00000004388)	ENSMAUG00000001015	Aadacl2fm2 (ENSMAUG00000007314)
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b.a	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.b.b
Prairie vole	MODERN SPECIES		Gfm1 (ENSMOCG00000000465)	Mlf1 (ENSMOCG00000018934)	Rsrc1 (ENSMOCG00000021372)	Shox2 (ENSMOCG00000018618)	Ptx3 (ENSMOCG00000022316)	Veph1 (ENSMOCG00000021347)	Ccnl1 (ENSMOCG00000020951)	ENSMOCG00000001595 #14	Tiparp (ENSMOCG00000011217) #15	Ssr3 (ENSMOCG00000000580) #16	Kcnab1 (ENSMOCG00000006596) #17	ENSMOCG00000018463	Vmn2r1 (ENSMOCG00000016363)	Gmps (ENSMOCG00000021456) #19	Slc33a1 (ENSMOCG00000015778) #21	E130311K13Rik (ENSMOCG00000022255) #22	Plch1 (ENSMOCG00000021300) #23	ENSMOCG00000013101	ENSMOCG00000013919	Mme (ENSMOCG00000019325) #25	Gpr149 (ENSMOCG00000021487) #26	Dhx36 (ENSMOCG00000006684) #27	ENSMOCG00000015894	Rap2b (ENSMOCG00000008675) #29	P2ry1 (ENSMOCG00000008589) #30	Mbnl1 (ENSMOCG00000016746) #31	Sucnr1 (ENSMOCG00000001555) #32	Aadac (ENSMOCG00000012125) #33	Aadacl2 (ENSMOCG00000010261) #34	ENSMOCG00000012366	Aadacl2fm3 (ENSMOCG00000018185)
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000010988	Shox2 (ENSPEMG00000024952)	Ptx3 (ENSPEMG00000029412)	Veph1 (ENSPEMG00000020957)	Ccnl1 (ENSPEMG00000000691)	ENSPEMG00000027465	ENSPEMG00000016123 #14	Tiparp (ENSPEMG00000014866) #15	Ssr3 (ENSPEMG00000008767) #16	Kcnab1 (ENSPEMG00000020802) #17	ENSPEMG00000003936	ENSPEMG00000005018	Vmn2r1 (ENSPEMG00000000138)	Gmps (ENSPEMG00000009799) #19	Slc33a1 (ENSPEMG00000011599) #21	E130311K13Rik (ENSPEMG00000024310) #22	Plch1 (ENSPEMG00000003317) #23	Strit1 (ENSPEMG00000012153)	Mme (ENSPEMG00000018942) #25	Gpr149 (ENSPEMG00000008920) #26	ENSPEMG00000031240	Dhx36 (ENSPEMG00000010012) #27	Arhgef26 (ENSPEMG00000017934) #28	Rap2b (ENSPEMG00000001736) #29	P2ry1 (ENSPEMG00000016052) #30	ENSPEMG00000027344	ENSPEMG00000027982	ENSPEMG00000026946	Mbnl1 (ENSPEMG00000011590) #31	Sucnr1 (ENSPEMG00000013535) #32	ENSPEMG00000005479 #33
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j.c.b	ENSGT00940000160473.j.c.a	ENSGT00940000160473.j.d	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00860000136157	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b.c	ENSGT00940000163586.b.b
Mus	ANCESTRAL SPECIES	7	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j.c.a	ENSGT00940000160473.j.d.a	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00860000136157	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b.c	ENSGT00940000163586.b.b
Mus_A	ANCESTRAL SPECIES	9	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j.c.a	ENSGT00940000160473.j.d.a	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00860000136157	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b.c.a	ENSGT00940000163586.b.b
Ryukyu mouse	MODERN SPECIES	12	Mlf1 (MGP_CAROLIEiJ_G0025051)	Rsrc1 (MGP_CAROLIEiJ_G0025050)	Shox2 (MGP_CAROLIEiJ_G0025049)	Ptx3 (MGP_CAROLIEiJ_G0025048)	Veph1 (MGP_CAROLIEiJ_G0025047)	Ccnl1 (MGP_CAROLIEiJ_G0025046)	MGP_CAROLIEiJ_G0025045 #14	Tiparp (MGP_CAROLIEiJ_G0025044) #15	Ssr3 (MGP_CAROLIEiJ_G0025043) #16	Kcnab1 (MGP_CAROLIEiJ_G0025042) #17	MGP_CAROLIEiJ_G0025041	Vmn2r1 (MGP_CAROLIEiJ_G0025040)	MGP_CAROLIEiJ_G0025039	Gmps (MGP_CAROLIEiJ_G0025038) #19	Slc33a1 (MGP_CAROLIEiJ_G0025037) #21	MGP_CAROLIEiJ_G0025036 #22	Plch1 (MGP_CAROLIEiJ_G0025035) #23	Mme (MGP_CAROLIEiJ_G0025034) #25	Gpr149 (MGP_CAROLIEiJ_G0025033) #26	Dhx36 (MGP_CAROLIEiJ_G0025032) #27	Arhgef26 (MGP_CAROLIEiJ_G0025031) #28	MGP_CAROLIEiJ_G0025030	Rap2b (MGP_CAROLIEiJ_G0025029) #29	P2ry1 (MGP_CAROLIEiJ_G0025028) #30	Mbnl1 (MGP_CAROLIEiJ_G0025027) #31	Sucnr1 (MGP_CAROLIEiJ_G0025026) #32	Aadac (MGP_CAROLIEiJ_G0025025) #33	Aadacl2 (MGP_CAROLIEiJ_G0025024) #34	Aadacl2fm1 (MGP_CAROLIEiJ_G0025023)	Aadacl2fm2 (MGP_CAROLIEiJ_G0025021)	Igsf10 (MGP_CAROLIEiJ_G0025020) #35
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j.d.a	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00860000136157	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b.c.a	ENSGT00940000163586.b.b
Mouse	MODERN SPECIES	12	Ccnl1 (ENSMUSG00000027829)	Lekr1 (ENSMUSG00000074579)	Tiparp (ENSMUSG00000034640) #15	Ssr3 (ENSMUSG00000027828) #16	Kcnab1 (ENSMUSG00000027827) #17	Vmn2r7 (ENSMUSG00000062200)	Vmn2r6 (ENSMUSG00000090581)	Vmn2r5 (ENSMUSG00000068999)	Vmn2r4 (ENSMUSG00000092049)	Vmn2r128 (ENSMUSG00000091967)	Vmn2r3 (ENSMUSG00000091572)	Vmn2r2 (ENSMUSG00000043897)	Vmn2r1 (ENSMUSG00000027824)	Gmps (ENSMUSG00000027823) #19	Slc33a1 (ENSMUSG00000027822) #21	E130311K13Rik (ENSMUSG00000048581) #22	Plch1 (ENSMUSG00000036834) #23	Strit1 (ENSMUSG00000103476)	Mme (ENSMUSG00000027820) #25	Gpr149 (ENSMUSG00000043441) #26	Dhx36 (ENSMUSG00000027770) #27	Arhgef26 (ENSMUSG00000036885) #28	Rap2b (ENSMUSG00000036894) #29	P2ry1 (ENSMUSG00000027765) #30	Mbnl1 (ENSMUSG00000027763) #31	Sucnr1 (ENSMUSG00000027762) #32	Aadac (ENSMUSG00000027761) #33	Aadacl2 (ENSMUSG00000091376) #34	Aadacl2fm1 (ENSMUSG00000036951)	Aadacl2fm3 (ENSMUSG00000095522)	Aadacl2fm2 (ENSMUSG00000090527)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473.j.d.a	ENSGT00940000160473.i	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00860000136157	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586.b.a.b.c.a	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.a.b
Steppe mouse	MODERN SPECIES	3174											Vmn2r3 (ENSMSIG00000029815)	ENSMSIG00000029810	Vmn2r2 (ENSMSIG00000029806)	ENSMSIG00000029546 #19	Slc33a1 (ENSMSIG00000029527) #21	E130311K13Rik (ENSMSIG00000029523) #22	Plch1 (ENSMSIG00000029344) #23	ENSMSIG00000029333	Mme (ENSMSIG00000029325) #25	ENSMSIG00000029317	ENSMSIG00000029312	Gpr149 (ENSMSIG00000029310) #26	Dhx36 (ENSMSIG00000029300) #27	Arhgef26 (ENSMSIG00000029279) #28
spretus	MODERN SPECIES	12	Shox2 (MGP_SPRETEiJ_G0025991)	Ptx3 (MGP_SPRETEiJ_G0025990)	Veph1 (MGP_SPRETEiJ_G0025989)	Ccnl1 (MGP_SPRETEiJ_G0025988)	MGP_SPRETEiJ_G0025987 #14	Tiparp (MGP_SPRETEiJ_G0025986) #15	Ssr3 (MGP_SPRETEiJ_G0025985) #16	Kcnab1 (MGP_SPRETEiJ_G0025984) #17	MGP_SPRETEiJ_G0025983	MGP_SPRETEiJ_G0025982	MGP_SPRETEiJ_G0025981	MGP_SPRETEiJ_G0025980	MGP_SPRETEiJ_G0025979	MGP_SPRETEiJ_G0025978 #19	Slc33a1 (MGP_SPRETEiJ_G0025977) #21	E130311K13Rik (MGP_SPRETEiJ_G0025976) #22	Plch1 (MGP_SPRETEiJ_G0025975) #23	Mme (MGP_SPRETEiJ_G0025974) #25	Gpr149 (MGP_SPRETEiJ_G0025973) #26	Dhx36 (MGP_SPRETEiJ_G0025972) #27	Arhgef26 (MGP_SPRETEiJ_G0025971) #28	MGP_SPRETEiJ_G0025970	Rap2b (MGP_SPRETEiJ_G0025969) #29	P2ry1 (MGP_SPRETEiJ_G0025968) #30	Mbnl1 (MGP_SPRETEiJ_G0025967) #31	Sucnr1 (MGP_SPRETEiJ_G0025966) #32	Aadac (MGP_SPRETEiJ_G0025965) #33	Aadacl2 (MGP_SPRETEiJ_G0025964) #34	Aadacl2fm1 (MGP_SPRETEiJ_G0025963)	MGP_SPRETEiJ_G0025961	MGP_SPRETEiJ_G0025960 #35
Shrew mouse	MODERN SPECIES	17	Gfm1 (MGP_PahariEiJ_G0026495)	Mlf1 (MGP_PahariEiJ_G0026494)	Rsrc1 (MGP_PahariEiJ_G0026493)	Shox2 (MGP_PahariEiJ_G0026492)	Ptx3 (MGP_PahariEiJ_G0026491)	Veph1 (MGP_PahariEiJ_G0026490)	Ccnl1 (MGP_PahariEiJ_G0026489)	MGP_PahariEiJ_G0026488 #14	Tiparp (MGP_PahariEiJ_G0026487) #15	Ssr3 (MGP_PahariEiJ_G0026486) #16	Kcnab1 (MGP_PahariEiJ_G0026485) #17	MGP_PahariEiJ_G0026484	Vmn2r1 (MGP_PahariEiJ_G0026483)	Gmps (MGP_PahariEiJ_G0026482) #19	Slc33a1 (MGP_PahariEiJ_G0026481) #21	E130311K13Rik (MGP_PahariEiJ_G0026480) #22	Plch1 (MGP_PahariEiJ_G0026479) #23	Mme (MGP_PahariEiJ_G0026478) #25	Gpr149 (MGP_PahariEiJ_G0026477) #26	Dhx36 (MGP_PahariEiJ_G0026476) #27	Arhgef26 (MGP_PahariEiJ_G0026475) #28	MGP_PahariEiJ_G0026474	Rap2b (MGP_PahariEiJ_G0026473) #29	P2ry1 (MGP_PahariEiJ_G0026472) #30	Mbnl1 (MGP_PahariEiJ_G0026471) #31	Sucnr1 (MGP_PahariEiJ_G0026470) #32	Aadac (MGP_PahariEiJ_G0026469) #33	MGP_PahariEiJ_G0026468 #34	Aadacl2fm1 (MGP_PahariEiJ_G0026467)	MGP_PahariEiJ_G0026465	Igsf10 (MGP_PahariEiJ_G0026464) #35
Rat	MODERN SPECIES	11	Veph1 (ENSRNOG00000012427)	Ccnl1 (ENSRNOG00000011586)	Lekr1 (ENSRNOG00000031247)	Tiparp (ENSRNOG00000011238) #15	Ssr3 (ENSRNOG00000011148) #16	Kcnab1 (ENSRNOG00000056697) #17	Vom2r47 (ENSRNOG00000028345)	AABR07010333.1 (ENSRNOG00000031248)	LOC120100835 (ENSRNOG00000066617)	ENSRNOG00000064787	Vom2r46 (ENSRNOG00000068452)	Vom2r45 (ENSRNOG00000064237)	Vom2r44 (ENSRNOG00000030104)	Gmps (ENSRNOG00000051151) #19	Slc33a1 (ENSRNOG00000010023) #21	C2h3orf33 (ENSRNOG00000021324) #22	Plch1 (ENSRNOG00000009955) #23	Strit1 (ENSRNOG00000066453)	Mme (ENSRNOG00000009514) #25	Gpr149 (ENSRNOG00000014793) #26	Dhx36 (ENSRNOG00000014599) #27	Arhgef26 (ENSRNOG00000014549) #28	ENSRNOG00000066767	Rap2b (ENSRNOG00000065432) #29	AABR07010787.1 (ENSRNOG00000053939)	P2ry1 (ENSRNOG00000014232) #30	Mbnl1 (ENSRNOG00000014076) #31	ENSRNOG00000065517	Sucnr1 (ENSRNOG00000014039) #32	Aadac (ENSRNOG00000013950) #33	RGD1560162 (ENSRNOG00000038008)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1112														Gmps (ENSNGAG00000019127) #19	Slc33a1 (ENSNGAG00000017451) #21	E130311K13Rik (ENSNGAG00000015579) #22	ENSNGAG00000004094	Plch1 (ENSNGAG00000000313) #23	ENSNGAG00000020116 #24	ENSNGAG00000019113 #25	Gpr149 (ENSNGAG00000014103) #26	Dhx36 (ENSNGAG00000015307) #27	Arhgef26 (ENSNGAG00000008817) #28
Lesser Egyptian jerboa	MODERN SPECIES	47												ENSJJAG00000022420	ENSJJAG00000019470	Gmps (ENSJJAG00000023127) #19	Slc33a1 (ENSJJAG00000003795) #21	E130311K13Rik (ENSJJAG00000013831) #22	Il9r (ENSJJAG00000010972)	Polr3k (ENSJJAG00000022791)	ENSJJAG00000021564	Rhbdf1 (ENSJJAG00000007873)	Mpg (ENSJJAG00000020414)	Nprl3 (ENSJJAG00000010629)	Hba-x (ENSJJAG00000010184)	ENSJJAG00000023100	ENSJJAG00000011884	ENSJJAG00000015959	Luc7l (ENSJJAG00000002974)	Fam234a (ENSJJAG00000021311)	Rgs11 (ENSJJAG00000012965)	Arhgdig (ENSJJAG00000023913)	Pdia2 (ENSJJAG00000021893)
Kangaroo rat	MODERN SPECIES	349	Gfm1 (ENSDORG00000014165)	Mlf1 (ENSDORG00000014164)	ENSDORG00000014162	Shox2 (ENSDORG00000006033)	Ptx3 (ENSDORG00000014563)	Veph1 (ENSDORG00000014560)	Ccnl1 (ENSDORG00000008224)	ENSDORG00000023530 #14	Tiparp (ENSDORG00000013554) #15	ENSDORG00000024089 #16	Kcnab1 (ENSDORG00000000796) #17	ENSDORG00000029512	ENSDORG00000001855	Gmps (ENSDORG00000014996) #19	Slc33a1 (ENSDORG00000013954) #21	E130311K13Rik (ENSDORG00000023719) #22	Plch1 (ENSDORG00000009727) #23	Mme (ENSDORG00000005785) #25	Dhx36 (ENSDORG00000004848) #27	Arhgef26 (ENSDORG00000004847) #28	P2ry1 (ENSDORG00000000159) #30	Mbnl1 (ENSDORG00000029896) #31	Sucnr1 (ENSDORG00000027346) #32
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35
Sciuridae	ANCESTRAL SPECIES	26	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000163586	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Marmotini	ANCESTRAL SPECIES	25	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000163586	ENSGT00940000158290 #35
Alpin marmot	MODERN SPECIES	19	RSRC1 (ENSMMMG00000016000)	ENSMMMG00000015978	VEPH1 (ENSMMMG00000015959)	ENSMMMG00000015953	CCNL1 (ENSMMMG00000015946)	ENSMMMG00000015936	ENSMMMG00000015928 #14	TIPARP (ENSMMMG00000015913) #15	ENSMMMG00000015911	SSR3 (ENSMMMG00000015908) #16	KCNAB1 (ENSMMMG00000015897) #17	ENSMMMG00000015856	GMPS (ENSMMMG00000015827) #19	ENSMMMG00000015821	SLC33A1 (ENSMMMG00000015806) #21	C3orf33 (ENSMMMG00000015801) #22	PLCH1 (ENSMMMG00000015750) #23	ENSMMMG00000015745	ENSMMMG00000015738	MME (ENSMMMG00000015658) #25	GPR149 (ENSMMMG00000015632) #26	ENSMMMG00000015607 #27	ARHGEF26 (ENSMMMG00000015536) #28	RAP2B (ENSMMMG00000015534) #29	P2RY1 (ENSMMMG00000015529) #30	ENSMMMG00000015517	MBNL1 (ENSMMMG00000015300) #31	SUCNR1 (ENSMMMG00000015288) #32	AADAC (ENSMMMG00000015181) #33	ENSMMMG00000015169	IGSF10 (ENSMMMG00000015152) #35
Marmotini_b	ANCESTRAL SPECIES	46	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000163586	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Arctic ground squirrel	MODERN SPECIES	111	MLF1 (ENSUPAG00010007820)	RSRC1 (ENSUPAG00010007492)	SHOX2 (ENSUPAG00010007482)	PTX3 (ENSUPAG00010007477)	VEPH1 (ENSUPAG00010007462)	CCNL1 (ENSUPAG00010007457)	LEKR1 (ENSUPAG00010007452)	ENSUPAG00010007447 #14	TIPARP (ENSUPAG00010007433) #15	ENSUPAG00010007423	SSR3 (ENSUPAG00010007397) #16	KCNAB1 (ENSUPAG00010007381) #17	ENSUPAG00010007272	GMPS (ENSUPAG00010007230) #19	SLC33A1 (ENSUPAG00010007214) #21	C3orf33 (ENSUPAG00010007194) #22	ENSUPAG00010007178	PLCH1 (ENSUPAG00010006835) #23	ENSUPAG00010006817	MME (ENSUPAG00010006795) #25	GPR149 (ENSUPAG00010006785) #26	DHX36 (ENSUPAG00010006741) #27	ARHGEF26 (ENSUPAG00010006714) #28	RAP2B (ENSUPAG00010006710) #29	P2RY1 (ENSUPAG00010006704) #30
Squirrel	MODERN SPECIES	119	MLF1 (ENSSTOG00000010142)	ENSSTOG00000004812	RSRC1 (ENSSTOG00000021591)	SHOX2 (ENSSTOG00000010121)	PTX3 (ENSSTOG00000023681)	VEPH1 (ENSSTOG00000014695)	CCNL1 (ENSSTOG00000011805)	LEKR1 (ENSSTOG00000026813)	ENSSTOG00000031297 #14	TIPARP (ENSSTOG00000027682) #15	SSR3 (ENSSTOG00000013773) #16	KCNAB1 (ENSSTOG00000025723) #17	ENSSTOG00000011094	GMPS (ENSSTOG00000026541) #19	SLC33A1 (ENSSTOG00000000095) #21	C3orf33 (ENSSTOG00000027383) #22	PLCH1 (ENSSTOG00000000090) #23	ENSSTOG00000030767	MME (ENSSTOG00000000081) #25	GPR149 (ENSSTOG00000003946) #26	DHX36 (ENSSTOG00000003917) #27	ARHGEF26 (ENSSTOG00000021966) #28	RAP2B (ENSSTOG00000029014) #29	P2RY1 (ENSSTOG00000005370) #30	MBNL1 (ENSSTOG00000026711) #31	SUCNR1 (ENSSTOG00000015405) #32
Eurasian red squirrel	MODERN SPECIES	1	LXN (ENSSVLG00005004800)	MLF1 (ENSSVLG00005004886)	RSRC1 (ENSSVLG00005005040)	SHOX2 (ENSSVLG00005005099)	VEPH1 (ENSSVLG00005005203)	PTX3 (ENSSVLG00005005353)	ENSSVLG00005005378	CCNL1 (ENSSVLG00005005434)	LEKR1 (ENSSVLG00005005558)	TIPARP (ENSSVLG00005005579) #15	ENSSVLG00005005598 #16	KCNAB1 (ENSSVLG00005005761) #17	ENSSVLG00005006157	GMPS (ENSSVLG00005006221) #19	SLC33A1 (ENSSVLG00005006332) #21	C3orf33 (ENSSVLG00005006407) #22	ENSSVLG00005006455	PLCH1 (ENSSVLG00005006514) #23	STRIT1 (ENSSVLG00005006829) #24	MME (ENSSVLG00005006865) #25	ENSSVLG00005006949	GPR149 (ENSSVLG00005006960) #26	DHX36 (ENSSVLG00005007041) #27	ARHGEF26 (ENSSVLG00005007133) #28	RAP2B (ENSSVLG00005007246) #29	P2RY1 (ENSSVLG00005007265) #30	ENSSVLG00005007281	MBNL1 (ENSSVLG00005007413) #31	SUCNR1 (ENSSVLG00005007593) #32	AADAC (ENSSVLG00005007632) #33	IGSF10 (ENSSVLG00005007686) #35
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.u.a #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	28	ENSHGLG00000007708	ENSHGLG00000048329	ENSHGLG00000003049	OSBPL10 (ENSHGLG00000003154)	GPD1L (ENSHGLG00000046132)	ENSHGLG00000035456	ENSHGLG00000047272	ENSHGLG00000037369	CMTM8 (ENSHGLG00000003541)	CMTM7 (ENSHGLG00000001487)	ENSHGLG00000034894	ENSHGLG00000001574	ENSHGLG00000001731	ENSHGLG00000019891	ENSHGLG00000039776	ENSHGLG00000047516 #22	ENSHGLG00000001826	ENSHGLG00000002090	GLB1 (ENSHGLG00000002150)	ENSHGLG00000002496	ENSHGLG00000037229	CRTAP (ENSHGLG00000002614)	SUSD5 (ENSHGLG00000040528)	ENSHGLG00000037082	ENSHGLG00000002747	FBXL2 (ENSHGLG00000002144)	UBP1 (ENSHGLG00000002333)	ENSHGLG00000003013	PDCD6IP (ENSHGLG00000004033) #12	ENSHGLG00000001187	ENSHGLG00000040644
Naked mole-rat female	MODERN SPECIES	27	PTX3 (ENSHGLG00000012461)	ENSHGLG00000045178	ENSHGLG00000012347	ENSHGLG00000011933	ENSHGLG00000011740	ENSHGLG00000045711	ENSHGLG00000034810 #14	ENSHGLG00000010960 #15	ENSHGLG00000020605	SSR3 (ENSHGLG00000037144) #16	KCNAB1 (ENSHGLG00000019332) #17	ENSHGLG00000039018	ENSHGLG00000019405	ENSHGLG00000019482 #19	SLC33A1 (ENSHGLG00000042989) #21	ENSHGLG00000019192 #22	PLCH1 (ENSHGLG00000017434) #23	ENSHGLG00000035877	MME (ENSHGLG00000013970) #25	ENSHGLG00000041038	ENSHGLG00000039740	ENSHGLG00000049890	ENSHGLG00000042929	GPR149 (ENSHGLG00000013607) #26	DHX36 (ENSHGLG00000017407) #27	ARHGEF26 (ENSHGLG00000017391)	RAP2B (ENSHGLG00000032240) #29	ENSHGLG00000013739	P2RY1 (ENSHGLG00000012962) #30	MBNL1 (ENSHGLG00000012911) #31	ENSHGLG00000032291
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.u.a #33	ENSGT00940000161405 #34	ENSGT00940000163586	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Hystricomorpha_b	ANCESTRAL SPECIES	9	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.u.a #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Long-tailed chinchilla	MODERN SPECIES	155	GFM1 (ENSCLAG00000002503)	MLF1 (ENSCLAG00000002260)	RSRC1 (ENSCLAG00000003542)	SHOX2 (ENSCLAG00000003167)	PTX3 (ENSCLAG00000003570)	VEPH1 (ENSCLAG00000003443)	ENSCLAG00000002842	ENSCLAG00000002747	ENSCLAG00000002596 #14	TIPARP (ENSCLAG00000002423) #15	SSR3 (ENSCLAG00000002284) #16	KCNAB1 (ENSCLAG00000012692) #17	ENSCLAG00000012602	GMPS (ENSCLAG00000007499) #19	SLC33A1 (ENSCLAG00000007266) #21	C3orf33 (ENSCLAG00000004358) #22	PLCH1 (ENSCLAG00000002471) #23	ENSCLAG00000002045	MME (ENSCLAG00000001839) #25	GPR149 (ENSCLAG00000004034) #26	DHX36 (ENSCLAG00000003610) #27	ARHGEF26 (ENSCLAG00000003300) #28	RAP2B (ENSCLAG00000003050) #29	P2RY1 (ENSCLAG00000003012) #30	MBNL1 (ENSCLAG00000002450) #31	SUCNR1 (ENSCLAG00000002102) #32	ENSCLAG00000002033 #33	ENSCLAG00000001891 #33	AADACL2 (ENSCLAG00000001836) #34	IGSF10 (ENSCLAG00000001781) #35	P2RY12 (ENSCLAG00000002335) #37
Guinea pig	MODERN SPECIES	8	GFM1 (ENSCPOG00000001194)	MLF1 (ENSCPOG00000000426)	RSRC1 (ENSCPOG00000000876)	SHOX2 (ENSCPOG00000038435)	PTX3 (ENSCPOG00000037636)	VEPH1 (ENSCPOG00000010480)	ENSCPOG00000031670	ENSCPOG00000025111 #14	TIPARP (ENSCPOG00000000345) #15	SSR3 (ENSCPOG00000037065) #16	KCNAB1 (ENSCPOG00000004890) #17	ENSCPOG00000033396	ENSCPOG00000011335	GMPS (ENSCPOG00000011574) #19	SLC33A1 (ENSCPOG00000005212) #21	C3orf33 (ENSCPOG00000035789) #22	ENSCPOG00000040284	PLCH1 (ENSCPOG00000004751) #23	STRIT1 (ENSCPOG00000037602) #24	MME (ENSCPOG00000007994) #25	ENSCPOG00000022096	GPR149 (ENSCPOG00000009609) #26	DHX36 (ENSCPOG00000007716) #27	ARHGEF26 (ENSCPOG00000007710) #28	RAP2B (ENSCPOG00000012843) #29	P2RY1 (ENSCPOG00000015545) #30	MBNL1 (ENSCPOG00000040271) #31	SUCNR1 (ENSCPOG00000036828) #32	AADAC (ENSCPOG00000004154) #33	AADACL2 (ENSCPOG00000030571) #34	ENSCPOG00000014355
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000167272	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000004493 #22
Hedgehog	MODERN SPECIES	6975																C3orf33 (ENSEEUG00000003750) #22
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000167272	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Suina	ANCESTRAL SPECIES	1	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Chacoan peccary	MODERN SPECIES	944	RARRES1 (ENSCWAG00000005368)	LXN (ENSCWAG00000005330)	GFM1 (ENSCWAG00000005248)	MLF1 (ENSCWAG00000004549)	RSRC1 (ENSCWAG00000004465)	SHOX2 (ENSCWAG00000021164)	PTX3 (ENSCWAG00000021153)	VEPH1 (ENSCWAG00000021141)	CCNL1 (ENSCWAG00000021119)	LEKR1 (ENSCWAG00000021096)	TIPARP (ENSCWAG00000021084) #15	SSR3 (ENSCWAG00000021071) #16	KCNAB1 (ENSCWAG00000020534) #17	GMPS (ENSCWAG00000020402) #19	SLC33A1 (ENSCWAG00000020377) #21	C3orf33 (ENSCWAG00000020351) #22	PLCH1 (ENSCWAG00000019684) #23	ENSCWAG00000019615	STRIT1 (ENSCWAG00000019605) #24	MME (ENSCWAG00000019525) #25	GPR149 (ENSCWAG00000019481) #26	DHX36 (ENSCWAG00000019200) #27	ARHGEF26 (ENSCWAG00000019051) #28	RAP2B (ENSCWAG00000019034) #29	P2RY1 (ENSCWAG00000019026) #30	MBNL1 (ENSCWAG00000018748) #31	ENSCWAG00000018680	SUCNR1 (ENSCWAG00000018665) #32	ENSCWAG00000018616 #33	ENSCWAG00000018587 #33	ENSCWAG00000018577
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Camelidae	ANCESTRAL SPECIES		ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000167272	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Arabian camel	MODERN SPECIES		LXN (ENSCDRG00005002303)	GFM1 (ENSCDRG00005002271)	MLF1 (ENSCDRG00005002182)	RSRC1 (ENSCDRG00005002140)	SHOX2 (ENSCDRG00005002041)	ENSCDRG00005002025	PTX3 (ENSCDRG00005002009)	VEPH1 (ENSCDRG00005001946)	CCNL1 (ENSCDRG00005001866)	LEKR1 (ENSCDRG00005001799)	TIPARP (ENSCDRG00005001771) #15	SSR3 (ENSCDRG00005001758) #16	KCNAB1 (ENSCDRG00005000711) #17	GMPS (ENSCDRG00005000518) #19	SLC33A1 (ENSCDRG00005000479) #21	C3orf33 (ENSCDRG00005000461) #22	PLCH1 (ENSCDRG00005000373) #23	STRIT1 (ENSCDRG00005000324) #24	MME (ENSCDRG00005000270) #25	GPR149 (ENSCDRG00005000230) #26	DHX36 (ENSCDRG00005000096) #27	ARHGEF26 (ENSCDRG00005000067) #28	RAP2B (ENSCDRG00005000053) #29	P2RY1 (ENSCDRG00005000045) #30	MBNL1 (ENSCDRG00005000024) #31	SUCNR1 (ENSCDRG00005000008) #32	AADAC (ENSCDRG00005000004) #33	ENSCDRG00005016968	AADACL2 (ENSCDRG00005016866) #34	ENSCDRG00005016844	IGSF10 (ENSCDRG00005016817) #35
Alpaca	MODERN SPECIES	2603										TIPARP (ENSVPAG00000008484) #15	SSR3 (ENSVPAG00000008483) #16	KCNAB1 (ENSVPAG00000008482) #17	ENSVPAG00000008480	GMPS (ENSVPAG00000008478) #19	SLC33A1 (ENSVPAG00000008477) #21	C3orf33 (ENSVPAG00000008476) #22	PLCH1 (ENSVPAG00000008474) #23	MME (ENSVPAG00000008471) #25
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000167272	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b.f #16	ENSGT00940000154586.g.a	ENSGT00940000156760 #17	ENSGT00730000111029.h	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000165902	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b.f #16	ENSGT00940000154586.g.a	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000165902	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b.f #16	ENSGT00940000154586.g.a	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000165902	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b.f #16	ENSGT00940000154586.g.a	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Monodontidae	ANCESTRAL SPECIES	23	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b.f #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000153096.b.c.b.a.a.a.b.a.a	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Narwhal	MODERN SPECIES	297	ENSMMNG00015001295	GFM1 (ENSMMNG00015001384)	MLF1 (ENSMMNG00015001539)	RSRC1 (ENSMMNG00015001723)	SHOX2 (ENSMMNG00015001781)	VEPH1 (ENSMMNG00015001888)	PTX3 (ENSMMNG00015001964)	CCNL1 (ENSMMNG00015002007)	LEKR1 (ENSMMNG00015002068)	TIPARP (ENSMMNG00015002122) #15	ENSMMNG00015002141 #16	KCNAB1 (ENSMMNG00015002282) #17	ENSMMNG00015002576	GMPS (ENSMMNG00015002623) #19	SLC33A1 (ENSMMNG00015002672) #21	C3orf33 (ENSMMNG00015002700) #22	PLCH1 (ENSMMNG00015002782) #23	ENSMMNG00015002948	ENSMMNG00015002967	STRIT1 (ENSMMNG00015002983) #24	MME (ENSMMNG00015003033) #25	ENSMMNG00015003103	GPR149 (ENSMMNG00015003118) #26	DHX36 (ENSMMNG00015003153) #27	ARHGEF26 (ENSMMNG00015003214) #28	RAP2B (ENSMMNG00015003241) #29	P2RY1 (ENSMMNG00015003258) #30	MBNL1 (ENSMMNG00015003348) #31	SUCNR1 (ENSMMNG00015003482) #32	ENSMMNG00015003497	IGSF10 (ENSMMNG00015003512) #35
Vaquita	MODERN SPECIES	15	RSRC1 (ENSPSNG00000000561)	SHOX2 (ENSPSNG00000000501)	ENSPSNG00000000457	PTX3 (ENSPSNG00000000445)	VEPH1 (ENSPSNG00000000364)	CCNL1 (ENSPSNG00000000286)	ENSPSNG00000000259	LEKR1 (ENSPSNG00000000223)	TIPARP (ENSPSNG00000000170) #15	SSR3 (ENSPSNG00000000147) #16	ENSPSNG00000000110	KCNAB1 (ENSPSNG00000019449) #17	ENSPSNG00000019296	GMPS (ENSPSNG00000019139) #19	SLC33A1 (ENSPSNG00000019036) #21	C3orf33 (ENSPSNG00000018983) #22	ENSPSNG00000018941	PLCH1 (ENSPSNG00000018233) #23	STRIT1 (ENSPSNG00000018071) #24	MME (ENSPSNG00000018017) #25	ENSPSNG00000017990	ENSPSNG00000017948	GPR149 (ENSPSNG00000017896) #26	DHX36 (ENSPSNG00000017807) #27	ARHGEF26 (ENSPSNG00000017750) #28	RAP2B (ENSPSNG00000017713) #29	P2RY1 (ENSPSNG00000017690) #30	MBNL1 (ENSPSNG00000017290) #31	SUCNR1 (ENSPSNG00000017164) #32	ENSPSNG00000017111	IGSF10 (ENSPSNG00000017040) #35
Dolphin	MODERN SPECIES	3523													ENSTTRG00000014797	GMPS (ENSTTRG00000014796) #19	SLC33A1 (ENSTTRG00000014795) #21	CUNH3orf33 (ENSTTRG00000014794) #22	PLCH1 (ENSTTRG00000014793) #23
Sperm whale	MODERN SPECIES		SHOX2 (ENSPCTG00005003800)	ENSPCTG00005003773	PTX3 (ENSPCTG00005003765)	VEPH1 (ENSPCTG00005003733)	CCNL1 (ENSPCTG00005003663)	ENSPCTG00005003638	LEKR1 (ENSPCTG00005003617)	TIPARP (ENSPCTG00005003592) #15	SSR3 (ENSPCTG00005003579) #16	ENSPCTG00005003569	KCNAB1 (ENSPCTG00005003144) #17	ENSPCTG00005003068	ENSPCTG00005003035	GMPS (ENSPCTG00005003000) #19	SLC33A1 (ENSPCTG00005002962) #21	C1H3orf33 (ENSPCTG00005002945) #22	ENSPCTG00005002938	PLCH1 (ENSPCTG00005002793) #23	ENSPCTG00005002721	ENSPCTG00005002714	LRRC3B (ENSPCTG00005002693)	OXSM (ENSPCTG00005002681)	NGLY1 (ENSPCTG00005002617)	TOP2B (ENSPCTG00005002467)	RARB (ENSPCTG00005002435)	ENSPCTG00005002423	ENSPCTG00005002407	THRB (ENSPCTG00005002356)	NR1D2 (ENSPCTG00005002323)	ENSPCTG00005002311	NKIRAS1 (ENSPCTG00005002302)
Blue whale	MODERN SPECIES	15	RSRC1 (ENSBMSG00010003618)	SHOX2 (ENSBMSG00010003594)	ENSBMSG00010003577	PTX3 (ENSBMSG00010003568)	VEPH1 (ENSBMSG00010003516)	CCNL1 (ENSBMSG00010003451)	LEKR1 (ENSBMSG00010003429)	TIPARP (ENSBMSG00010003410) #15	ENSBMSG00010003398 #16	ENSBMSG00010003383	KCNAB1 (ENSBMSG00010003309) #17	ENSBMSG00010003257	ENSBMSG00010003213	GMPS (ENSBMSG00010003175) #19	SLC33A1 (ENSBMSG00010003142) #21	C3orf33 (ENSBMSG00010003125) #22	ENSBMSG00010003115	PLCH1 (ENSBMSG00010002496) #23	STRIT1 (ENSBMSG00010002387) #24	MME (ENSBMSG00010002306) #25	ENSBMSG00010002280	ENSBMSG00010002266	GPR149 (ENSBMSG00010002240) #26	DHX36 (ENSBMSG00010002188) #27	ARHGEF26 (ENSBMSG00010002131) #28	ENSBMSG00010002101	RAP2B (ENSBMSG00010002082) #29	P2RY1 (ENSBMSG00010002069) #30	ENSBMSG00010002061	MBNL1 (ENSBMSG00010001872) #31	ENSBMSG00010001822
Pecora	ANCESTRAL SPECIES	8	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.o.b #33	ENSGT00940000155975.o.a #33	ENSGT00940000161405.g #34	ENSGT00940000155975.p #33
Percora_a	ANCESTRAL SPECIES	7	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.o.b #33	ENSGT00940000155975.o.a #33	ENSGT00940000155975.p #33	ENSGT00940000161405.g #34
Bovidae	ANCESTRAL SPECIES	9	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.o.b #33	ENSGT00940000155975.o.a #33	ENSGT00940000155975.p #33
Caprinae	ANCESTRAL SPECIES	8	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970.b.g #16	ENSGT00940000156760 #17	ENSGT00950000182995.e.a.a.a.fb.a.b	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00900000143541	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.o.a #33	ENSGT00940000155975.p #33	ENSGT00940000161405.g #34
Rambouillet Sheep	MODERN SPECIES		LXN (ENSOARG00020000302)	MLF1 (ENSOARG00020000362)	RSRC1 (ENSOARG00020000715)	SHOX2 (ENSOARG00020000755)	VEPH1 (ENSOARG00020000860)	PTX3 (ENSOARG00020000946)	CCNL1 (ENSOARG00020000976)	LEKR1 (ENSOARG00020001026)	ENSOARG00020001059	TIPARP (ENSOARG00020001069) #15	SSR3 (ENSOARG00020001079) #16	KCNAB1 (ENSOARG00020001172) #17	ENSOARG00020001823	GMPS (ENSOARG00020001873) #19	SLC33A1 (ENSOARG00020002067) #21	C3orf33 (ENSOARG00020002111) #22	PLCH1 (ENSOARG00020002177) #23	STRIT1 (ENSOARG00020002364) #24	MME (ENSOARG00020002391) #25	GPR149 (ENSOARG00020002480) #26	DHX36 (ENSOARG00020002569) #27	ARHGEF26 (ENSOARG00020002906) #28	ENSOARG00020002971	RAP2B (ENSOARG00020002980) #29	P2RY1 (ENSOARG00020002995) #30	MBNL1 (ENSOARG00020003112) #31	ENSOARG00020003630	ENSOARG00020003641 #33	ENSOARG00020003670 #33	ENSOARG00020003743	ENSOARG00020003749
Goat	MODERN SPECIES		MLF1 (ENSCHIG00000018923)	ENSCHIG00000011968	SHOX2 (ENSCHIG00000016128)	VEPH1 (ENSCHIG00000027071)	PTX3 (ENSCHIG00000012523)	CCNL1 (ENSCHIG00000015405)	ENSCHIG00000010147	ENSCHIG00000023809	TIPARP (ENSCHIG00000018721) #15	SSR3 (ENSCHIG00000012338) #16	KCNAB1 (ENSCHIG00000023684) #17	ENSCHIG00000025482	ENSCHIG00000020039	GMPS (ENSCHIG00000022844) #19	SLC33A1 (ENSCHIG00000013645) #21	C3orf33 (ENSCHIG00000025795) #22	ENSCHIG00000011194	PLCH1 (ENSCHIG00000024716) #23	MME (ENSCHIG00000018324) #25	ENSCHIG00000017243	GPR149 (ENSCHIG00000005003) #26	DHX36 (ENSCHIG00000017463) #27	ARHGEF26 (ENSCHIG00000012613) #28	ENSCHIG00000025851	RAP2B (ENSCHIG00000011695) #29	P2RY1 (ENSCHIG00000008918) #30	ENSCHIG00000019221	MBNL1 (ENSCHIG00000019308) #31	ENSCHIG00000024419	SUCNR1 (ENSCHIG00000008127) #32	ENSCHIG00000020191 #33
Bovinae	ANCESTRAL SPECIES	6	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000013771.f.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.o.b #33	ENSGT00940000155975.o.a #33	ENSGT00940000155975.p #33
Bos	ANCESTRAL SPECIES	7	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01080000259023	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000013771.f.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00390000009588.pb.a.a.a	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.o.b #33
Bos_b	ANCESTRAL SPECIES	5	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01080000259023	ENSGT00940000156745 #25	ENSGT00390000013771.f.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT00940000163420	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00390000009588.pb.a.a.a	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.o.b #33	ENSGT00940000155975.o.a #33
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005012116	SHOX2 (ENSBIXG00005012090)	VEPH1 (ENSBIXG00005011960)	PTX3 (ENSBIXG00005011820)	ENSBIXG00005011803	CCNL1 (ENSBIXG00005011760)	LEKR1 (ENSBIXG00005011662)	TIPARP (ENSBIXG00005011554) #15	ENSBIXG00005001118	SSR3 (ENSBIXG00005001116) #16	KCNAB1 (ENSBIXG00005011415) #17	ENSBIXG00005011267	GMPS (ENSBIXG00005011224) #19	ENSBIXG00005011169	SLC33A1 (ENSBIXG00005011151) #21	C3orf33 (ENSBIXG00005001018) #22	PLCH1 (ENSBIXG00005011013) #23	ENSBIXG00005010857	MME (ENSBIXG00005010777) #25	ENSBIXG00005010519	GPR149 (ENSBIXG00005010478) #26	DHX36 (ENSBIXG00005010428) #27	ENSBIXG00005010192	ENSBIXG00005010090	RAP2B (ENSBIXG00005000777) #29	ENSBIXG00005010071	P2RY1 (ENSBIXG00005010036) #30	ENSBIXG00005009997	MBNL1 (ENSBIXG00005009946) #31	SUCNR1 (ENSBIXG00005006769) #32	ENSBIXG00005009787 #33
Cow	MODERN SPECIES		GFM1 (ENSBTAG00000027795)	LXN (ENSBTAG00000009336)	MLF1 (ENSBTAG00000004126)	RSRC1 (ENSBTAG00000031561)	SHOX2 (ENSBTAG00000005230)	VEPH1 (ENSBTAG00000024643)	PTX3 (ENSBTAG00000009012)	CCNL1 (ENSBTAG00000003851)	ENSBTAG00000018009	ENSBTAG00000050129 #14	TIPARP (ENSBTAG00000012120) #15	SSR3 (ENSBTAG00000018471) #16	KCNAB1 (ENSBTAG00000018465) #17	GMPS (ENSBTAG00000013013) #19	SLC33A1 (ENSBTAG00000014318) #21	C1H3orf33 (ENSBTAG00000005203) #22	PLCH1 (ENSBTAG00000008307) #23	MME (ENSBTAG00000002075) #25	ENSBTAG00000024623	GPR149 (ENSBTAG00000006147) #26	DHX36 (ENSBTAG00000006142) #27	ARHGEF26 (ENSBTAG00000013439)	ENSBTAG00000047341	RAP2B (ENSBTAG00000055257) #29	P2RY1 (ENSBTAG00000001465) #30	ENSBTAG00000033740	MBNL1 (ENSBTAG00000004564) #31	SUCNR1 (ENSBTAG00000053581) #32	ENSBTAG00000049884 #33	AADAC (ENSBTAG00000011569) #33	ENSBTAG00000050308 #33
Bos_a	ANCESTRAL SPECIES	5	ENSGT00530000063813.a	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01080000259023	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000013771.f.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00390000009588.pb.a.a.a	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.o.b #33
Wild yak	MODERN SPECIES	821												SSR3 (ENSBMUG00000006226) #16	KCNAB1 (ENSBMUG00000006586) #17	GMPS (ENSBMUG00000006738) #19	SLC33A1 (ENSBMUG00000006768) #21	C3orf33 (ENSBMUG00000006782) #22	PLCH1 (ENSBMUG00000006875) #23	ENSBMUG00000006966
Domestic yak	MODERN SPECIES		RSRC1 (ENSBGRG00000015425)	ENSBGRG00000015623	SHOX2 (ENSBGRG00000015647)	VEPH1 (ENSBGRG00000016007)	PTX3 (ENSBGRG00000016322)	CCNL1 (ENSBGRG00000016437)	LEKR1 (ENSBGRG00000016645)	ENSBGRG00000016728	TIPARP (ENSBGRG00000016750) #15	SSR3 (ENSBGRG00000016835) #16	KCNAB1 (ENSBGRG00000017121) #17	ENSBGRG00000017938	GMPS (ENSBGRG00000007144) #19	SLC33A1 (ENSBGRG00000007545) #21	ENSBGRG00000007689	C3orf33 (ENSBGRG00000007709) #22	PLCH1 (ENSBGRG00000007957) #23	ENSBGRG00000009536	STRIT1 (ENSBGRG00000009547) #24	MME (ENSBGRG00000009643) #25	ENSBGRG00000010202	GPR149 (ENSBGRG00000010222) #26	DHX36 (ENSBGRG00000010375) #27	ARHGEF26 (ENSBGRG00000011886) #28	ENSBGRG00000012249	ENSBGRG00000012278	P2RY1 (ENSBGRG00000012398) #30	ENSBGRG00000012435	ENSBGRG00000012450	MBNL1 (ENSBGRG00000012526) #31	SUCNR1 (ENSBGRG00000013608) #32
American bison	MODERN SPECIES	3125													ENSBBBG00000001279	GMPS (ENSBBBG00000001297) #19	SLC33A1 (ENSBBBG00000001364) #21	C3orf33 (ENSBBBG00000001389) #22	PLCH1 (ENSBBBG00000015311) #23	STRIT1 (ENSBBBG00000015180) #24	MME (ENSBBBG00000015170) #25	ENSBBBG00000015065	GPR149 (ENSBBBG00000015060) #26	DHX36 (ENSBBBG00000015040) #27	ENSBBBG00000014942
Siberian musk deer	MODERN SPECIES	1183										ENSMMSG00000011383 #14	TIPARP (ENSMMSG00000011420) #15	SSR3 (ENSMMSG00000011432) #16	KCNAB1 (ENSMMSG00000011581) #17	GMPS (ENSMMSG00000013100) #19	SLC33A1 (ENSMMSG00000013176) #21	C3orf33 (ENSMMSG00000013217) #22	PLCH1 (ENSMMSG00000013316) #23	STRIT1 (ENSMMSG00000014519) #24	MME (ENSMMSG00000014537) #25	ENSMMSG00000014648 ##18	GPR149 (ENSMMSG00000014655) #26	DHX36 (ENSMMSG00000014726) #27	ENSMMSG00000015280	ENSMMSG00000015319	RAP2B (ENSMMSG00000015344) #29	ENSMMSG00000015354	P2RY1 (ENSMMSG00000015380) #30	MBNL1 (ENSMMSG00000015435) #31	SUCNR1 (ENSMMSG00000015945) #32	ENSMMSG00000015969 #33	ENSMMSG00000016002 #33
Yarkand deer	MODERN SPECIES	10	RARRES1 (ENSCHYG00000018389)	GFM1 (ENSCHYG00000018556)	MLF1 (ENSCHYG00000018977)	RSRC1 (ENSCHYG00000019368)	SHOX2 (ENSCHYG00000019538)	VEPH1 (ENSCHYG00000019688)	PTX3 (ENSCHYG00000019896)	CCNL1 (ENSCHYG00000005169)	LEKR1 (ENSCHYG00000005267)	TIPARP (ENSCHYG00000005381) #15	SSR3 (ENSCHYG00000005427) #16	KCNAB1 (ENSCHYG00000005549) #17	GMPS (ENSCHYG00000006185) #19	ENSCHYG00000006350	SLC33A1 (ENSCHYG00000006374) #21	C3orf33 (ENSCHYG00000006450) #22	PLCH1 (ENSCHYG00000006524) #23	ENSCHYG00000006823	MME (ENSCHYG00000006865) #25	GPR149 (ENSCHYG00000007062) #26	DHX36 (ENSCHYG00000007110) #27	ARHGEF26 (ENSCHYG00000007452) #28	RAP2B (ENSCHYG00000007516) #29	P2RY1 (ENSCHYG00000007564) #30	MBNL1 (ENSCHYG00000007632) #31	SUCNR1 (ENSCHYG00000008303) #32	ENSCHYG00000008311 #33	ENSCHYG00000008329 #33	AADACL2 (ENSCHYG00000008371) #34	ENSCHYG00000008458	IGSF10 (ENSCHYG00000008469) #35
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000167272	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Carnivora	ANCESTRAL SPECIES	10	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000167272	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Caniformia	ANCESTRAL SPECIES		ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Caniformia_b	ANCESTRAL SPECIES		ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Ursidae	ANCESTRAL SPECIES	1	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745.d #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Ursus	ANCESTRAL SPECIES	14	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745.d #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
American black bear	MODERN SPECIES	1991														GMPS (ENSUAMG00000015465) #19	SLC33A1 (ENSUAMG00000015462) #21	C3orf33 (ENSUAMG00000015459) #22
Polar bear	MODERN SPECIES	112	GFM1 (ENSUMAG00000011268)	LXN (ENSUMAG00000011274)	MLF1 (ENSUMAG00000011284)	RSRC1 (ENSUMAG00000011315)	ENSUMAG00000011328	VEPH1 (ENSUMAG00000011364)	ENSUMAG00000011385	CCNL1 (ENSUMAG00000011392)	ENSUMAG00000011399	ENSUMAG00000011444 #14	TIPARP (ENSUMAG00000011453) #15	SSR3 (ENSUMAG00000011504) #16	KCNAB1 (ENSUMAG00000011542) #17	GMPS (ENSUMAG00000011640) #19	SLC33A1 (ENSUMAG00000011735) #21	C3orf33 (ENSUMAG00000011751) #22	PLCH1 (ENSUMAG00000011780) #23	ENSUMAG00000011864	ENSUMAG00000011878 #25	ENSUMAG00000011884 #25	GPR149 (ENSUMAG00000011899) #26	DHX36 (ENSUMAG00000011908) #27	ARHGEF26 (ENSUMAG00000011949) #28	RAP2B (ENSUMAG00000011989) #29	P2RY1 (ENSUMAG00000011991) #30	MBNL1 (ENSUMAG00000012004) #31	SUCNR1 (ENSUMAG00000012017) #32	AADAC (ENSUMAG00000012022) #33	AADACL2 (ENSUMAG00000012027) #34	IGSF10 (ENSUMAG00000012038) #35	MED12L (ENSUMAG00000012075) #36
Giant Panda	MODERN SPECIES		GFM1 (ENSAMEG00000013542)	LXN (ENSAMEG00000013580)	MLF1 (ENSAMEG00000013527)	RSRC1 (ENSAMEG00000029988)	SHOX2 (ENSAMEG00000013513)	VEPH1 (ENSAMEG00000003085)	PTX3 (ENSAMEG00000013511)	CCNL1 (ENSAMEG00000003092)	LEKR1 (ENSAMEG00000003113)	TIPARP (ENSAMEG00000003118) #15	ENSAMEG00000018879	SSR3 (ENSAMEG00000030214) #16	KCNAB1 (ENSAMEG00000003137) #17	GMPS (ENSAMEG00000002551) #19	SLC33A1 (ENSAMEG00000002592) #21	C3orf33 (ENSAMEG00000024093) #22	PLCH1 (ENSAMEG00000002608) #23	STRIT1 (ENSAMEG00000024481) #24	MME (ENSAMEG00000001740) #25	GPR149 (ENSAMEG00000011712) #26	DHX36 (ENSAMEG00000011721) #27	ARHGEF26 (ENSAMEG00000011755) #28	RAP2B (ENSAMEG00000019139) #29	P2RY1 (ENSAMEG00000019110) #30	MBNL1 (ENSAMEG00000008884) #31	SUCNR1 (ENSAMEG00000008881) #32	AADAC (ENSAMEG00000008866) #33	AADACL2 (ENSAMEG00000008864) #34	IGSF10 (ENSAMEG00000008858) #35	ENSAMEG00000008749 #36	P2RY12 (ENSAMEG00000019091) #37
Mustelinae	ANCESTRAL SPECIES	59	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Ferret	MODERN SPECIES	211	LXN (ENSMPUG00000002863)	GFM1 (ENSMPUG00000002859)	MLF1 (ENSMPUG00000002854)	RSRC1 (ENSMPUG00000002851)	SHOX2 (ENSMPUG00000002839)	PTX3 (ENSMPUG00000002835)	VEPH1 (ENSMPUG00000002831)	CCNL1 (ENSMPUG00000002825)	ENSMPUG00000002816	TIPARP (ENSMPUG00000002811) #15	SSR3 (ENSMPUG00000002806) #16	KCNAB1 (ENSMPUG00000002795) #17	ENSMPUG00000002788	GMPS (ENSMPUG00000002781) #19	SLC33A1 (ENSMPUG00000002776) #21	C3orf33 (ENSMPUG00000002773) #22	PLCH1 (ENSMPUG00000002757) #23	MME (ENSMPUG00000002746) #25	ENSMPUG00000002741	GPR149 (ENSMPUG00000002729) #26	DHX36 (ENSMPUG00000002723) #27	ARHGEF26 (ENSMPUG00000002716) #28	RAP2B (ENSMPUG00000018988) #29	ENSMPUG00000018985	P2RY1 (ENSMPUG00000018978) #30	MBNL1 (ENSMPUG00000002708) #31	SUCNR1 (ENSMPUG00000002700) #32	ENSMPUG00000002674	AADACL2 (ENSMPUG00000002670) #34	IGSF10 (ENSMPUG00000002663) #35	P2RY12 (ENSMPUG00000018975) #37
American mink	MODERN SPECIES	61														GMPS (ENSNVIG00000012092) #19	SLC33A1 (ENSNVIG00000012116) #21	C3orf33 (ENSNVIG00000012169) #22	PLCH1 (ENSNVIG00000012209) #23	STRIT1 (ENSNVIG00000012323) #24	MME (ENSNVIG00000012334) #25	GPR149 (ENSNVIG00000012479) #26	DHX36 (ENSNVIG00000012493) #27	ARHGQ (ENSNVIG00000012585) #28	RAP2B (ENSNVIG00000012670) #29	P2RY1 (ENSNVIG00000012681) #30	MBNL1 (ENSNVIG00000012696) #31	SUCNR1 (ENSNVIG00000012963) #32	AADACL2 (ENSNVIG00000012970) #34	IGSF10 (ENSNVIG00000013004) #35	MED12L (ENSNVIG00000013027) #36	P2RY12 (ENSNVIG00000013274) #37	P2RY13 (ENSNVIG00000013277) ##37
Canidae	ANCESTRAL SPECIES	24	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.a.a ##16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Red fox	DUPLICATION
Red fox	MODERN SPECIES	56	GFM1 (ENSVVUG00000020091)	MLF1 (ENSVVUG00000020071)	ENSVVUG00000020068	ENSVVUG00000020061	SHOX2 (ENSVVUG00000020055)	ENSVVUG00000020036	ENSVVUG00000020034	ENSVVUG00000020028	CCNL1 (ENSVVUG00000019906)	LEKR1 (ENSVVUG00000019882)	TIPARP (ENSVVUG00000019862) #15	ENSVVUG00000019852 ##16	KCNAB1 (ENSVVUG00000019840) #17	GMPS (ENSVVUG00000019829) #19	SLC33A1 (ENSVVUG00000019826) #21	ENSVVUG00000019825 #22	PCLO (ENSVVUG00000019718)	CACNA2D1 (ENSVVUG00000019647)	HGF (ENSVVUG00000019636)	ENSVVUG00000019629	SEMA3C (ENSVVUG00000019617)	CD36 (ENSVVUG00000019582)	GNAT3 (ENSVVUG00000019546)	ENSVVUG00000019542	GNAI1 (ENSVVUG00000019537)	MAGI2 (ENSVVUG00000019514)	PHTF2 (ENSVVUG00000019501)	TMEM60 (ENSVVUG00000019495)	RSBN1L (ENSVVUG00000019480)	ENSVVUG00000019476	PTPN12 (ENSVVUG00000019465)
Red fox	MODERN SPECIES	26	AHI1 (ENSVVUG00000000451)	ENSVVUG00000000569	PDE7B (ENSVVUG00000000584)	MTFR2 (ENSVVUG00000000593)	ENSVVUG00000000603	ENSVVUG00000000623	MAP7 (ENSVVUG00000000652)	MAP3K5 (ENSVVUG00000000760)	ENSVVUG00000002154	PEX7 (ENSVVUG00000002175)	SLC35D3 (ENSVVUG00000002202)	IL20RA (ENSVVUG00000002217)	IL22RA2 (ENSVVUG00000002229)	IFNGR1 (ENSVVUG00000002286)	ENSVVUG00000002326	ENSVVUG00000002335 #22	OLIG3 (ENSVVUG00000002352)	ENSVVUG00000002359	TNFAIP3 (ENSVVUG00000002369)	ENSVVUG00000002382	ARFGEF3 (ENSVVUG00000002408)	HEBP2 (ENSVVUG00000002586)	NHSL1 (ENSVVUG00000002603)	CCDC28A (ENSVVUG00000002636)	ENSVVUG00000002647	REPS1 (ENSVVUG00000002733)	ABRACL (ENSVVUG00000004368)	ENSVVUG00000004375	TXLNB (ENSVVUG00000004389)	ENSVVUG00000004483	NMBR (ENSVVUG00000004507)
Canis_lupus	ANCESTRAL SPECIES	27	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.a.b.a ##16	ENSGT00390000000970.a.a ##16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Dingo	MODERN SPECIES	115	GFM1 (ENSCAFG00020005878)	ENSCAFG00020005828	RSRC1 (ENSCAFG00020005818)	SHOX2 (ENSCAFG00020005811)	ENSCAFG00020005806	ENSCAFG00020005804	CCNL1 (ENSCAFG00020005656)	LEKR1 (ENSCAFG00020005636)	ENSCAFG00020005632 #14	TIPARP (ENSCAFG00020005619) #15	ENSCAFG00020005606 ##16	ENSCAFG00020005601	KCNAB1 (ENSCAFG00020005593) #17	GMPS (ENSCAFG00020005568) #19	SLC33A1 (ENSCAFG00020005560) #21	C3orf33 (ENSCAFG00020005555) #22	PLCH1 (ENSCAFG00020005412) #23	ENSCAFG00020005383 #25	ENSCAFG00020005378 #25	GPR149 (ENSCAFG00020005372) #26	DHX36 (ENSCAFG00020004966) #27	ARHGEF26 (ENSCAFG00020004904) #28	RAP2B (ENSCAFG00020004894) #29	P2RY1 (ENSCAFG00020004892) #30	MBNL1 (ENSCAFG00020004737) #31	SUCNR1 (ENSCAFG00020004722) #32	AADAC (ENSCAFG00020004717) #33	AADACL2 (ENSCAFG00020004698) #34	IGSF10 (ENSCAFG00020004678) #35	P2RY12 (ENSCAFG00020004675) #37	P2RY13 (ENSCAFG00020004672) ##37
Dog	MODERN SPECIES	15	ENSCAFG00845025008	LXN (ENSCAFG00845024952)	GFM1 (ENSCAFG00845024782)	MLF1 (ENSCAFG00845024615)	RSRC1 (ENSCAFG00845024332)	SHOX2 (ENSCAFG00845024168)	ENSCAFG00845024115	VEPH1 (ENSCAFG00845023758)	CCNL1 (ENSCAFG00845023534)	LEKR1 (ENSCAFG00845023191)	TIPARP (ENSCAFG00845023055) #15	ENSCAFG00845023016 ##16	KCNAB1 (ENSCAFG00845022469) #17	GMPS (ENSCAFG00845021930) #19	SLC33A1 (ENSCAFG00845021734) #21	C3orf33 (ENSCAFG00845021566) #22	ENSCAFG00845021471	PLCH1 (ENSCAFG00845021263) #23	STRIT1 (ENSCAFG00845021186) #24	MME (ENSCAFG00845020957) #25	GPR149 (ENSCAFG00845020850) #26	DHX36 (ENSCAFG00845020573) #27	ARHGEF26 (ENSCAFG00845020247) #28	RAP2B (ENSCAFG00845020015) #29	P2RY1 (ENSCAFG00845027994) #30	MBNL1 (ENSCAFG00845027626) #31	ENSCAFG00845027427	SUCNR1 (ENSCAFG00845027383) #32	AADAC (ENSCAFG00845027279) #33	AADAC (ENSCAFG00845027240) #34	IGSF10 (ENSCAFG00845027170) #35
Felidae	ANCESTRAL SPECIES	9	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000167272	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Panthera	ANCESTRAL SPECIES	12	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000167272	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Panthera_a	ANCESTRAL SPECIES	17	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000167272	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
leopard	MODERN SPECIES	5	GFM1 (ENSPPRG00000009281)	MLF1 (ENSPPRG00000010057)	ENSPPRG00000010610	RSRC1 (ENSPPRG00000012590)	SHOX2 (ENSPPRG00000012987)	ENSPPRG00000013159	PTX3 (ENSPPRG00000013280)	VEPH1 (ENSPPRG00000014553)	CCNL1 (ENSPPRG00000015223)	LEKR1 (ENSPPRG00000016442)	TIPARP (ENSPPRG00000017076) #15	SSR3 (ENSPPRG00000018310) #16	KCNAB1 (ENSPPRG00000024997) #17	GMPS (ENSPPRG00000024889) #19	SLC33A1 (ENSPPRG00000024861) #21	C3orf33 (ENSPPRG00000024803) #22	PLCH1 (ENSPPRG00000023905) #23	STRIT1 (ENSPPRG00000023798) #24	MME (ENSPPRG00000023388) #25	GPR149 (ENSPPRG00000023313) #26	DHX36 (ENSPPRG00000002879) #27	ARHGEF26 (ENSPPRG00000003558) #28	ENSPPRG00000003876	RAP2B (ENSPPRG00000014584) #29	P2RY1 (ENSPPRG00000014596) #30	MBNL1 (ENSPPRG00000005721) #31	SUCNR1 (ENSPPRG00000014600) #32	AADAC (ENSPPRG00000006081) #33	AADACL2 (ENSPPRG00000006624) #34	ENSPPRG00000006746 #34	IGSF10 (ENSPPRG00000006930) #35
lion	MODERN SPECIES	9	LXN (ENSPLOG00000013849)	GFM1 (ENSPLOG00000013707)	MLF1 (ENSPLOG00000013649)	ENSPLOG00000013628	RSRC1 (ENSPLOG00000013528)	SHOX2 (ENSPLOG00000013339)	PTX3 (ENSPLOG00000013109)	VEPH1 (ENSPLOG00000012921)	CCNL1 (ENSPLOG00000012698)	LEKR1 (ENSPLOG00000012490)	TIPARP (ENSPLOG00000012424) #15	SSR3 (ENSPLOG00000012356) #16	KCNAB1 (ENSPLOG00000011367) #17	GMPS (ENSPLOG00000010967) #19	SLC33A1 (ENSPLOG00000010862) #21	C3orf33 (ENSPLOG00000010806) #22	PLCH1 (ENSPLOG00000010097) #23	STRIT1 (ENSPLOG00000009947) #24	MME (ENSPLOG00000009835) #25	GPR149 (ENSPLOG00000009781) #26	DHX36 (ENSPLOG00000009521) #27	ARHGEF26 (ENSPLOG00000009339) #28	RAP2B (ENSPLOG00000009294) #29	P2RY1 (ENSPLOG00000009202) #30	MBNL1 (ENSPLOG00000008833) #31	SUCNR1 (ENSPLOG00000008719) #32	AADACL2 (ENSPLOG00000008683) #34	ENSPLOG00000008594 #34	IGSF10 (ENSPLOG00000008540) #35	P2RY12 (ENSPLOG00000008519) #37	P2RY13 (ENSPLOG00000008510) ##37
Tiger	MODERN SPECIES	242	GFM1 (ENSPTIG00000012416)	LXN (ENSPTIG00000013811)	MLF1 (ENSPTIG00000014178)	RSRC1 (ENSPTIG00000017358)	SHOX2 (ENSPTIG00000002610)	ENSPTIG00000007545	VEPH1 (ENSPTIG00000007873)	PTX3 (ENSPTIG00000011127)	CCNL1 (ENSPTIG00000011507)	LEKR1 (ENSPTIG00000013039)	TIPARP (ENSPTIG00000014258) #15	SSR3 (ENSPTIG00000016314) #16	KCNAB1 (ENSPTIG00000018164) #17	GMPS (ENSPTIG00000012623) #19	SLC33A1 (ENSPTIG00000014526) #21	C3orf33 (ENSPTIG00000014993) #22	PLCH1 (ENSPTIG00000015618) #23	STRIT1 (ENSPTIG00000010401) #24	MME (ENSPTIG00000016196) #25	GPR149 (ENSPTIG00000017502) #26	DHX36 (ENSPTIG00000018478) #27	ARHGEF26 (ENSPTIG00000021954) #28	P2RY1 (ENSPTIG00000002203) #30	MBNL1 (ENSPTIG00000022119) #31	SUCNR1 (ENSPTIG00000012951) #32	AADACL2 (ENSPTIG00000014555) #34	ENSPTIG00000015317 #34	IGSF10 (ENSPTIG00000015886) #35	MED12L (ENSPTIG00000017099) #36	P2RY12 (ENSPTIG00000003600) #37	P2RY13 (ENSPTIG00000009474) ##37
Cat	MODERN SPECIES	240	LXN (ENSFCAG00000013292)	MLF1 (ENSFCAG00000022176)	RSRC1 (ENSFCAG00000013290)	ENSFCAG00000051036	SHOX2 (ENSFCAG00000037357)	VEPH1 (ENSFCAG00000015589)	PTX3 (ENSFCAG00000003464)	ENSFCAG00000047506	CCNL1 (ENSFCAG00000005138)	LEKR1 (ENSFCAG00000025717)	TIPARP (ENSFCAG00000013314) #15	SSR3 (ENSFCAG00000028606) #16	KCNAB1 (ENSFCAG00000005945) #17	GMPS (ENSFCAG00000025327) #19	SLC33A1 (ENSFCAG00000027140) #21	CC2H3orf33 (ENSFCAG00000044100) #22	PLCH1 (ENSFCAG00000012834) #23	STRIT1 (ENSFCAG00000046459) #24	MME (ENSFCAG00000004615) #25	GPR149 (ENSFCAG00000004861) #26	DHX36 (ENSFCAG00000004860) #27	ARHGEF26 (ENSFCAG00000028110) #28	RAP2B (ENSFCAG00000005952) #29	P2RY1 (ENSFCAG00000013018) #30	MBNL1 (ENSFCAG00000028419) #31	SUCNR1 (ENSFCAG00000000221) #32	AADACL2 (ENSFCAG00000022581) #34	ENSFCAG00000026683 #34	IGSF10 (ENSFCAG00000010400) #35	MED12L (ENSFCAG00000010395) #36	P2RY13 (ENSFCAG00000046452) ##37
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Equus	ANCESTRAL SPECIES	5													ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00950000182895.a.a.a.b.f	ENSGT00940000157185 #23	ENSGT01080000259939	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975.j #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT01060000248592.E #37
Donkey	MODERN SPECIES	13	IFNGR1 (ENSEASG00005011722)	OLIG3 (ENSEASG00005011723)	TNFAIP3 (ENSEASG00005011724)	ENSEASG00005034498	ARFGEF3 (ENSEASG00005011767)	SMIM28 (ENSEASG00005028436)	HEBP2 (ENSEASG00005034494)	ENSEASG00005028125	ENSEASG00005037446	CCDC28A (ENSEASG00005011995)	ECT2L (ENSEASG00005012001)	ENSEASG00005012008	ENSEASG00005022521	ENSEASG00005022509 #19	SLC33A1 (ENSEASG00005022505) #21	C3orf33 (ENSEASG00005022502) #22	ENSEASG00005022500	PLCH1 (ENSEASG00005022484) #23	ENSEASG00005038568	MME (ENSEASG00005022266) #25	GPR149 (ENSEASG00005020678) #26	DHX36 (ENSEASG00005020682) #27	ARHGEF26 (ENSEASG00005020696) #28	RAP2B (ENSEASG00005034390) #29	P2RY1 (ENSEASG00005025565) #30	MBNL1 (ENSEASG00005020731) #31	SUCNR1 (ENSEASG00005025304) #32	AADAC (ENSEASG00005025316) #33	ENSEASG00005035766	ENSEASG00005020751 #33	AADACL2 (ENSEASG00005020769) #34
Horse	MODERN SPECIES	7													ENSECAG00000024575	GMPS (ENSECAG00000023269) #19	SLC33A1 (ENSECAG00000022461) #21	C3orf33 (ENSECAG00000053423) #22	ENSECAG00000001897	PLCH1 (ENSECAG00000016623) #23	ENSECAG00000039581	MME (ENSECAG00000009138) #25	ENSECAG00000054272	GPR149 (ENSECAG00000009123) #26	DHX36 (ENSECAG00000025100) #27	ENSECAG00000023848	ARHGEF26 (ENSECAG00000025019) #28	RAP2B (ENSECAG00000024986) #29	P2RY1 (ENSECAG00000001845) #30	MBNL1 (ENSECAG00000024349) #31	SUCNR1 (ENSECAG00000024345) #32	ENSECAG00000042933 #33	ENSECAG00000027989
Chiroptera	ANCESTRAL SPECIES	13	ENSGT00530000063813.a	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Megabat	MODERN SPECIES	31																C3orf33 (ENSPVAG00000007212) #22	PLCH1 (ENSPVAG00000007208) #23
Microchiroptera	ANCESTRAL SPECIES	11	ENSGT00530000063813.a	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34
Microbat	MODERN SPECIES	1007	GFM1 (ENSMLUG00000000452)	LXN (ENSMLUG00000000462)	MLF1 (ENSMLUG00000000447)	SHOX2 (ENSMLUG00000024898)	VEPH1 (ENSMLUG00000000477)	PTX3 (ENSMLUG00000000487)	CCNL1 (ENSMLUG00000015049)	LEKR1 (ENSMLUG00000012119)	TIPARP (ENSMLUG00000006995) #15	ENSMLUG00000009885	SSR3 (ENSMLUG00000015478) #16	KCNAB1 (ENSMLUG00000015462) #17	GMPS (ENSMLUG00000015442) #19	ENSMLUG00000024763	SLC33A1 (ENSMLUG00000001019) #21	C3orf33 (ENSMLUG00000026622) #22	ENSMLUG00000005520 #23	ENSMLUG00000027166	MME (ENSMLUG00000014941) #25	GPR149 (ENSMLUG00000012000) #26	DHX36 (ENSMLUG00000002318) #27	ARHGEF26 (ENSMLUG00000002307) #28	P2RY1 (ENSMLUG00000027366) #30
Atlantogenata	ANCESTRAL SPECIES	45	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Xenarthra	ANCESTRAL SPECIES	142	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23
Armadillo	MODERN SPECIES	1154	PTX3 (ENSDNOG00000036438)	ENSDNOG00000031998	CCNL1 (ENSDNOG00000009325)	ENSDNOG00000039650	ENSDNOG00000031446 #13	ENSDNOG00000046381 #14	TIPARP (ENSDNOG00000006676) #15	ENSDNOG00000048811	ENSDNOG00000000752 #16	KCNAB1 (ENSDNOG00000000745) #17	ENSDNOG00000038913	ENSDNOG00000019348	GMPS (ENSDNOG00000017772) #19	ENSDNOG00000040652	SLC33A1 (ENSDNOG00000045008) #21	C3orf33 (ENSDNOG00000031969) #22	PLCH1 (ENSDNOG00000008919) #23	ENSDNOG00000041013
Sloth	MODERN SPECIES	6195																C3orf33 (ENSCHOG00000013532) #22
Afrotheria	ANCESTRAL SPECIES	59	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37	ENSGT01060000248592.C ##37
Tenrec	MODERN SPECIES	6803															SLC33A1 (ENSETEG00000008625) #21	C3orf33 (ENSETEG00000008620) #22
Afrotheria_a	ANCESTRAL SPECIES	57	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT00940000155975 #33	ENSGT00940000161405 #34	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37	ENSGT01060000248592.C ##37
Hyrax	MODERN SPECIES	5751																C3orf33 (ENSPCAG00000015165) #22
Elephant	MODERN SPECIES	383	MLF1 (ENSLAFG00000010939)	ENSLAFG00000017819	SHOX2 (ENSLAFG00000017816)	ENSLAFG00000000904	VEPH1 (ENSLAFG00000011038)	PTX3 (ENSLAFG00000011043)	CCNL1 (ENSLAFG00000007715)	ENSLAFG00000014510	ENSLAFG00000029018	TIPARP (ENSLAFG00000008210) #15	SSR3 (ENSLAFG00000014757) #16	KCNAB1 (ENSLAFG00000014751) #17	ENSLAFG00000010095	GMPS (ENSLAFG00000012230) #19	SLC33A1 (ENSLAFG00000015062) #21	C3orf33 (ENSLAFG00000015059) #22	PLCH1 (ENSLAFG00000001248) #23	MME (ENSLAFG00000015397) #25	GPR149 (ENSLAFG00000015353) #26	DHX36 (ENSLAFG00000015342) #27	ENSLAFG00000011446 #28	P2RY1 (ENSLAFG00000028360) #30	MBNL1 (ENSLAFG00000017683) #31	ENSLAFG00000028332	AADAC (ENSLAFG00000016283) #33	AADACL2 (ENSLAFG00000007175) #34	ENSLAFG00000029762 #34	IGSF10 (ENSLAFG00000000038) #35	MED12L (ENSLAFG00000000027) #36	P2RY12 (ENSLAFG00000003890) #37	P2RY13 (ENSLAFG00000022576) ##37
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00950000182930.B	ENSGT00950000182930.A.a	ENSGT00950000182930.A.b	ENSGT00950000182930.C	ENSGT00940000159865
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00950000182930.B	ENSGT00950000182930.A.a	ENSGT00950000182930.A.b	ENSGT00950000182930.C
Diprotodontia	ANCESTRAL SPECIES	17	ENSGT00530000063813.a	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00950000182930.B	ENSGT00950000182930.A.a	ENSGT00950000182930.A.b	ENSGT00950000182930.C	ENSGT00940000159865
Diprotodontia_a	ANCESTRAL SPECIES	19	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970.b #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00950000182930.B	ENSGT00950000182930.A.a	ENSGT00950000182930.A.b	ENSGT00950000182930.C	ENSGT00940000159865
Common wonbat	MODERN SPECIES	1046	ENSVURG00010016763	MLF1 (ENSVURG00010016775)	RSRC1 (ENSVURG00010016788)	SHOX2 (ENSVURG00010016800)	VEPH1 (ENSVURG00010016819)	PTX3 (ENSVURG00010016844)	CCNL1 (ENSVURG00010016857)	ENSVURG00010016876	ENSVURG00010016886 #14	TIPARP (ENSVURG00010016896) #15	SSR3 (ENSVURG00010016903) #16	KCNAB1 (ENSVURG00010016914) #17	ENSVURG00010016928	GMPS (ENSVURG00010016941) #19	SLC33A1 (ENSVURG00010016955) #21	ENSVURG00010016972 #22	PLCH1 (ENSVURG00010017004) #23	ENSVURG00010017174	MME (ENSVURG00010017187) #25	GPR149 (ENSVURG00010017273) #26	DHX36 (ENSVURG00010017291) #27	ARHGEF26 (ENSVURG00010017313) #28	RAP2B (ENSVURG00010017346) #29	P2RY1 (ENSVURG00010017360) #30	MBNL1 (ENSVURG00010017405) #31	SUCNR1 (ENSVURG00010017482) #32	AADAC (ENSVURG00010017488) #33	ENSVURG00010017495	ENSVURG00010017506	ENSVURG00010017518	AHSG (ENSVURG00010017527)
koala	MODERN SPECIES	33	MLF1 (ENSPCIG00000020160)	RSRC1 (ENSPCIG00000032999)	SHOX2 (ENSPCIG00000001160)	VEPH1 (ENSPCIG00000003684)	PTX3 (ENSPCIG00000036781)	ENSPCIG00000003670	ENSPCIG00000031903	ENSPCIG00000003648 #14	TIPARP (ENSPCIG00000003641) #15	ENSPCIG00000003630 ##16	KCNAB1 (ENSPCIG00000003598) #17	ENSPCIG00000037318	ENSPCIG00000000035	GMPS (ENSPCIG00000000036) #19	SLC33A1 (ENSPCIG00000000037) #21	C3orf33 (ENSPCIG00000000038) #22	PLCH1 (ENSPCIG00000000039) #23	MME (ENSPCIG00000000041) #25	GPR149 (ENSPCIG00000000044) #26	DHX36 (ENSPCIG00000000045) #27	ARHGEF26 (ENSPCIG00000036495) #28	ENSPCIG00000027226	RAP2B (ENSPCIG00000028767) #29	P2RY1 (ENSPCIG00000034707) #30	MBNL1 (ENSPCIG00000019478) #31	SUCNR1 (ENSPCIG00000005188) #32	ENSPCIG00000005183 #33	ENSPCIG00000033990	ENSPCIG00000010050	AHSG (ENSPCIG00000010049)	ENSPCIG00000005171
Wallaby	MODERN SPECIES	8343																C3orf33 (ENSMEUG00000010993) #22
Tasmanian devil	MODERN SPECIES	2	LXN (ENSSHAG00000023262)	GFM1 (ENSSHAG00000017772)	MLF1 (ENSSHAG00000017825)	RSRC1 (ENSSHAG00000021746)	ENSSHAG00000025260	PTX3 (ENSSHAG00000032216)	VEPH1 (ENSSHAG00000018730)	CCNL1 (ENSSHAG00000018819)	ENSSHAG00000026588	TIPARP (ENSSHAG00000028913) #15	SSR3 (ENSSHAG00000023585) #16	KCNAB1 (ENSSHAG00000004797) #17	ENSSHAG00000009677	GMPS (ENSSHAG00000010345) #19	SLC33A1 (ENSSHAG00000029855) #21	ENSSHAG00000028439 #22	PLCH1 (ENSSHAG00000012063) #23	STRIT1 (ENSSHAG00000031937) #24	MME (ENSSHAG00000013418) #25	GPR149 (ENSSHAG00000029857) #26	DHX36 (ENSSHAG00000016292) #27	ARHGEF26 (ENSSHAG00000016399) #28	P2RY1 (ENSSHAG00000025343) #30	MBNL1 (ENSSHAG00000018364) #31	ENSSHAG00000031492 #32	ENSSHAG00000001815 #33	ENSSHAG00000003664	ENSSHAG00000004328	ENSSHAG00000026129	ENSSHAG00000027914	ENSSHAG00000029302
Platypus	MODERN SPECIES		RBP1 (ENSOANG00000002683)	ENSOANG00000041359	ENSOANG00000002680	CLSTN2 (ENSOANG00000000204)	TRIM42 (ENSOANG00000014969)	ENSOANG00000012051	SLC25A36 (ENSOANG00000050040)	PXYLP1 (ENSOANG00000022504)	LEKR1 (ENSOANG00000028954)	TIPARP (ENSOANG00000051335) #15	SSR3 (ENSOANG00000041038) #16	KCNAB1 (ENSOANG00000038732) #17	ENSOANG00000010029	GMPS (ENSOANG00000013670) #19	SLC33A1 (ENSOANG00000010031) #21	ENSOANG00000010032 #22	PLCH1 (ENSOANG00000012464) #23	MME (ENSOANG00000009510) #25	GPR149 (ENSOANG00000041736) #26	DHX36 (ENSOANG00000007079) #27	ARHGEF26 (ENSOANG00000044706) #28	RAP2B (ENSOANG00000045350) #29	P2RY1 (ENSOANG00000011870) #30	MBNL1 (ENSOANG00000007992) #31	ENSOANG00000045237 #32	ENSOANG00000037737 #32	AADAC (ENSOANG00000009529) #33	IGSF10 (ENSOANG00000010952) #35	MED12L (ENSOANG00000013198) #36	P2RY12 (ENSOANG00000012173) #37	P2RY13 (ENSOANG00000013417) ##37
Sauria	ANCESTRAL SPECIES	9	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Archelosauria	ANCESTRAL SPECIES	11	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Archosauria	ANCESTRAL SPECIES	10	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Aves	ANCESTRAL SPECIES	13	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Neognathae	ANCESTRAL SPECIES	9	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Galloanserae	ANCESTRAL SPECIES	16	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Anatidae	ANCESTRAL SPECIES	31	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT00850000132319.a.a.a	ENSGT00940000159812	ENSGT00940000153655.A.b
Pink-footed goose	MODERN SPECIES	97	LXN (ENSABRG00000002995)	GFM1 (ENSABRG00000001459)	MLF1 (ENSABRG00000001346)	RSRC1 (ENSABRG00000001329)	ENSABRG00000001255	PTX3 (ENSABRG00000001205)	VEPH1 (ENSABRG00000001126)	CCNL1 (ENSABRG00000001075)	LEKR1 (ENSABRG00000000923)	TIPARP (ENSABRG00000000888) #15	SSR3 (ENSABRG00000000872) #16	KCNAB1 (ENSABRG00000000815) #17	ENSABRG00000019823 #17	GMPS (ENSABRG00000019797) #19	SLC33A1 (ENSABRG00000019790) #21	C3orf33 (ENSABRG00000019787) #22	PLCH1 (ENSABRG00000019784) #23	MME (ENSABRG00000019778) #25	GPR149 (ENSABRG00000019773) #26	DHX36 (ENSABRG00000019769) #27	ARHGEF26 (ENSABRG00000019762) #28	RAP2B (ENSABRG00000019748) #29	P2RY1 (ENSABRG00000019744) #30	MBNL1 (ENSABRG00000019722) #31	SUCNR1 (ENSABRG00000019709) #32	AADAC (ENSABRG00000019699) #33	IGSF10 (ENSABRG00000019669) #35	GPR87 (ENSABRG00000019665) ##37	P2RY14 (ENSABRG00000019663) ##37	MED12L (ENSABRG00000019397) #36	CLRN1 (ENSABRG00000019386)
Duck	MODERN SPECIES	27	GFM1 (ENSAPLG00000005022)	LXN (ENSAPLG00000005337)	MLF1 (ENSAPLG00000005007)	RSRC1 (ENSAPLG00000004783)	SHOX2 (ENSAPLG00000028948)	ENSAPLG00000004823	VEPH1 (ENSAPLG00000004613)	PTX3 (ENSAPLG00000004626)	CCNL1 (ENSAPLG00000010427)	LEKR1 (ENSAPLG00000010703)	TIPARP (ENSAPLG00000010788) #15	SSR3 (ENSAPLG00000010825) #16	KCNAB1 (ENSAPLG00000011083) #17	GMPS (ENSAPLG00000011347) #19	SLC33A1 (ENSAPLG00000018174) #21	C3orf33 (ENSAPLG00000015160) #22	PLCH1 (ENSAPLG00000014302) #23	MME (ENSAPLG00000013114) #25	GPR149 (ENSAPLG00000013026) #26	DHX36 (ENSAPLG00000012597) #27	ARHGEF26 (ENSAPLG00000012467) #28	RAP2B (ENSAPLG00000022231) #29	P2RY1 (ENSAPLG00000001615) #30	MBNL1 (ENSAPLG00000012049) #31	SUCNR1 (ENSAPLG00000011989) #32	AADAC (ENSAPLG00000011863) #33	ENSAPLG00000019073	IGSF10 (ENSAPLG00000011740) #35	MED12L (ENSAPLG00000010557) #36	P2RY13 (ENSAPLG00000001613) ##37	GPR171 (ENSAPLG00000011531)
Phasianidae	ANCESTRAL SPECIES	9	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660.a	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Japanese quail	MODERN SPECIES	27	LXN (ENSCJPG00005018105)	MLF1 (ENSCJPG00005018106)	RSRC1 (ENSCJPG00005018107)	SHOX2 (ENSCJPG00005018108)	ENSCJPG00005018111	ENSCJPG00005018112	PTX3 (ENSCJPG00005018113)	ENSCJPG00005018114	CCNL1 (ENSCJPG00005018116)	LEKR1 (ENSCJPG00005018118)	TIPARP (ENSCJPG00005018120) #15	SSR3 (ENSCJPG00005018121) #16	KCNAB1 (ENSCJPG00005018122) #17	GMPS (ENSCJPG00005018125) #19	SLC33A1 (ENSCJPG00005018128) #21	C3orf33 (ENSCJPG00005018129) #22	PLCH1 (ENSCJPG00005018132) #23	MME (ENSCJPG00005018136) #25	GPR149 (ENSCJPG00005018139) #26	DHX36 (ENSCJPG00005018141) #27	ARHGEF26 (ENSCJPG00005018143) #28	RAP2B (ENSCJPG00005018144) #29	P2RY1 (ENSCJPG00005018145) #30	MBNL1 (ENSCJPG00005018147) #31	ENSCJPG00005018148	SUCNR1 (ENSCJPG00005018150) #32	AADAC (ENSCJPG00005018151) #33	IGSF10 (ENSCJPG00005018154) #35	MED12L (ENSCJPG00005018213) #36	P2RY12 (ENSCJPG00005018732) #37	P2RY13 (ENSCJPG00005018733) ##37
Phasianidae_b	ANCESTRAL SPECIES	12	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660.a	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Chicken	MODERN SPECIES	38	LXN (ENSGALG00010001190)	MLF1 (ENSGALG00010001192)	RSRC1 (ENSGALG00010001206)	SHOX2 (ENSGALG00010001216)	ENSGALG00010001217	ENSGALG00010001218	VEPH1 (ENSGALG00010001226)	PTX3 (ENSGALG00010001230)	CCNL1 (ENSGALG00010001495)	LEKR1 (ENSGALG00010001497)	TIPARP (ENSGALG00010001499) #15	SSR3 (ENSGALG00010001505) #16	KCNAB1 (ENSGALG00010001520) #17	GMPS (ENSGALG00010001301) #19	SLC33A1 (ENSGALG00010001066) #21	C3orf33 (ENSGALG00010001070) #22	PLCH1 (ENSGALG00010001333) #23	MME (ENSGALG00010001385) #25	GPR149 (ENSGALG00010001450) #26	DHX36 (ENSGALG00010001462) #27	ARHGEF26 (ENSGALG00010001469) #28	ENSGALG00010001493	RAP2B (ENSGALG00010001535) #29	P2RY1 (ENSGALG00010001082) #30	MBNL1 (ENSGALG00010001104) #31	SUCNR1 (ENSGALG00010001111) #32	AADAC (ENSGALG00010001708) #33	IGSF10 (ENSGALG00010001113) #35	MED12L (ENSGALG00010001114) #36	P2RY12 (ENSGALG00010001118) #37	P2RY13 (ENSGALG00010001117) ##37
Turkey	MODERN SPECIES	2	GFM1 (ENSMGAG00000010641)	LXN (ENSMGAG00000018871)	MLF1 (ENSMGAG00000010656)	RSRC1 (ENSMGAG00000010633)	SHOX2 (ENSMGAG00000021833)	ENSMGAG00000022083	VEPH1 (ENSMGAG00000010670)	PTX3 (ENSMGAG00000010676)	CCNL1 (ENSMGAG00000010679)	ENSMGAG00000010696	TIPARP (ENSMGAG00000010699) #15	SSR3 (ENSMGAG00000010707) #16	KCNAB1 (ENSMGAG00000010715) #17	GMPS (ENSMGAG00000010733) #19	SLC33A1 (ENSMGAG00000010750) #21	C3orf33 (ENSMGAG00000010753) #22	PLCH1 (ENSMGAG00000010755) #23	MME (ENSMGAG00000010779) #25	GPR149 (ENSMGAG00000010831) #26	DHX36 (ENSMGAG00000010853) #27	ARHGEF26 (ENSMGAG00000010835) #28	RAP2B (ENSMGAG00000010860) #29	P2RY1 (ENSMGAG00000016075) #30	ENSMGAG00000020939	MBNL1 (ENSMGAG00000010862) #31	SUCNR1 (ENSMGAG00000010883) #32	AADAC (ENSMGAG00000010885) #33	ENSMGAG00000022260 #35	ENSMGAG00000010910 #36	P2RY12 (ENSMGAG00000020686) #37	GPR87 (ENSMGAG00000010921) ##37
Neognathae_b	ANCESTRAL SPECIES	11	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Passeriformes	ANCESTRAL SPECIES	9	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00960000189716	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37	ENSGT01060000248592.C ##37
Great tit	MODERN SPECIES	29	GFM1 (ENSPMJG00000005877)	MLF1 (ENSPMJG00000006472)	ENSPMJG00000006474	ENSPMJG00000006475	SHOX2 (ENSPMJG00000006476)	VEPH1 (ENSPMJG00000006562)	PTX3 (ENSPMJG00000006575)	CCNL1 (ENSPMJG00000006580)	LEKR1 (ENSPMJG00000006710)	TIPARP (ENSPMJG00000006715) #15	SSR3 (ENSPMJG00000006717) #16	KCNAB1 (ENSPMJG00000006726) #17	ENSPMJG00000006735	GMPS (ENSPMJG00000006742) #19	SLC33A1 (ENSPMJG00000006748) #21	C3orf33 (ENSPMJG00000006750) #22	PLCH1 (ENSPMJG00000006754) #23	MME (ENSPMJG00000006763) #25	GPR149 (ENSPMJG00000006770) #26	DHX36 (ENSPMJG00000006774) #27	ARHGEF26 (ENSPMJG00000006839) #28	RAP2B (ENSPMJG00000006998) #29	P2RY1 (ENSPMJG00000007004) #30	MBNL1 (ENSPMJG00000007009) #31	SUCNR1 (ENSPMJG00000007026) #32	AADAC (ENSPMJG00000007027) #33	ENSPMJG00000007037 #35	P2RY12 (ENSPMJG00000007055) #37	P2RY13 (ENSPMJG00000007057) ##37	GPR87 (ENSPMJG00000007060) ##37	ENSPMJG00000007062
Passeriformes_d	ANCESTRAL SPECIES	10	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00960000189716	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37	ENSGT01060000248592.C ##37
Passeriformes_g	ANCESTRAL SPECIES	11	ENSGT00530000063813.a	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37	ENSGT01060000248592.C ##37
Passeroidea	ANCESTRAL SPECIES	13	ENSGT00530000063813.a	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37	ENSGT01060000248592.C ##37
Zebra finch	MODERN SPECIES	31	GFM1 (ENSTGUG00000028908)	MLF1 (ENSTGUG00000011211)	RSRC1 (ENSTGUG00000011212)	ENSTGUG00000021027	ENSTGUG00000028427	SHOX2 (ENSTGUG00000011221)	VEPH1 (ENSTGUG00000011225)	PTX3 (ENSTGUG00000011229)	CCNL1 (ENSTGUG00000011231)	LEKR1 (ENSTGUG00000011239)	TIPARP (ENSTGUG00000017448) #15	SSR3 (ENSTGUG00000011245) #16	KCNAB1 (ENSTGUG00000011253) #17	GMPS (ENSTGUG00000011256) #19	SLC33A1 (ENSTGUG00000011271) #21	C3orf33 (ENSTGUG00000019088) #22	PLCH1 (ENSTGUG00000011275) #23	MME (ENSTGUG00000011304) #25	ENSTGUG00000028744	GPR149 (ENSTGUG00000011327) #26	DHX36 (ENSTGUG00000011317) #27	ARHGEF26 (ENSTGUG00000011330) #28	RAP2B (ENSTGUG00000018897) #29	ENSTGUG00000020230	P2RY1 (ENSTGUG00000011335) #30	MBNL1 (ENSTGUG00000011341) #31	SUCNR1 (ENSTGUG00000011348) #32	AADAC (ENSTGUG00000023040) #33	IGSF10 (ENSTGUG00000019363) #35	P2RY12 (ENSTGUG00000026372) #37	P2RY13 (ENSTGUG00000024805) ##37
Common canary	MODERN SPECIES	10	RARRES1 (ENSSCAG00000009619)	LXN (ENSSCAG00000009605)	GFM1 (ENSSCAG00000009269)	ENSSCAG00000009210	ENSSCAG00000009201	ENSSCAG00000009194	PTX3 (ENSSCAG00000009186)	VEPH1 (ENSSCAG00000009174)	CCNL1 (ENSSCAG00000009169)	LEKR1 (ENSSCAG00000009161)	TIPARP (ENSSCAG00000009150) #15	SSR3 (ENSSCAG00000009147) #16	KCNAB1 (ENSSCAG00000009142) #17	GMPS (ENSSCAG00000009120) #19	SLC33A1 (ENSSCAG00000009014) #21	C3orf33 (ENSSCAG00000008985) #22	PLCH1 (ENSSCAG00000008936) #23	MME (ENSSCAG00000008911) #25	DHX36 (ENSSCAG00000008892) #27	ARHGEF26 (ENSSCAG00000008816) #28	P2RY1 (ENSSCAG00000008798) #30	MBNL1 (ENSSCAG00000008785) #31	SUCNR1 (ENSSCAG00000008778) #32	AADAC (ENSSCAG00000008769) #33	IGSF10 (ENSSCAG00000008723) #35	P2RY12 (ENSSCAG00000008717) #37	P2RY13 (ENSSCAG00000008714) ##37	GPR87 (ENSSCAG00000008711) ##37	P2RY14 (ENSSCAG00000008704) ##37	GPR171 (ENSSCAG00000008701)	CLRN1 (ENSSCAG00000008686)
Medium ground finch	MODERN SPECIES	12	MFSD1 (ENSGFOG00000012904)	RARRES1 (ENSGFOG00000012908)	ENSGFOG00000012911	GFM1 (ENSGFOG00000012913)	MLF1 (ENSGFOG00000012919)	ENSGFOG00000012925	VEPH1 (ENSGFOG00000012933)	PTX3 (ENSGFOG00000012963)	CCNL1 (ENSGFOG00000012965)	LEKR1 (ENSGFOG00000013001)	TIPARP (ENSGFOG00000013011) #15	SSR3 (ENSGFOG00000013018) #16	KCNAB1 (ENSGFOG00000013021) #17	GMPS (ENSGFOG00000013032) #19	SLC33A1 (ENSGFOG00000013063) #21	C3orf33 (ENSGFOG00000013072) #22	PLCH1 (ENSGFOG00000000177) #23	MME (ENSGFOG00000000194) #25	GPR149 (ENSGFOG00000000220) #26	DHX36 (ENSGFOG00000000241) #27	ARHGEF26 (ENSGFOG00000000262) #28	RAP2B (ENSGFOG00000000269) #29	ENSGFOG00000000274	P2RY1 (ENSGFOG00000000280) #30	MBNL1 (ENSGFOG00000000288) #31	SUCNR1 (ENSGFOG00000000303) #32	AADAC (ENSGFOG00000000310) #33	ENSGFOG00000000317 #35	P2RY12 (ENSGFOG00000000325) #37	P2RY13 (ENSGFOG00000000329) ##37	GPR87 (ENSGFOG00000000331) ##37
Flycatcher	MODERN SPECIES	28	ENSFALG00000025108	SHOX2 (ENSFALG00000004733)	ENSFALG00000025231	ENSFALG00000026953	ENSFALG00000024357	VEPH1 (ENSFALG00000004742)	PTX3 (ENSFALG00000024281)	CCNL1 (ENSFALG00000004760)	LEKR1 (ENSFALG00000004778)	ENSFALG00000027016	TIPARP (ENSFALG00000004781) #15	SSR3 (ENSFALG00000004786) #16	KCNAB1 (ENSFALG00000004804) #17	GMPS (ENSFALG00000004855) #19	SLC33A1 (ENSFALG00000004880) #21	C3orf33 (ENSFALG00000028770) #22	PLCH1 (ENSFALG00000004898) #23	MME (ENSFALG00000004943) #25	GPR149 (ENSFALG00000005032) #26	DHX36 (ENSFALG00000005045) #27	ARHGEF26 (ENSFALG00000005061) #28	RAP2B (ENSFALG00000014478) #29	P2RY1 (ENSFALG00000014494) #30	MBNL1 (ENSFALG00000005088) #31	SUCNR1 (ENSFALG00000028931) #32	ENSFALG00000024123	AADAC (ENSFALG00000005120) #33	ENSFALG00000027454 #35	ENSFALG00000005138 #35	P2RY12 (ENSFALG00000014524) #37	P2RY13 (ENSFALG00000005151) ##37
Neognathae_c	ANCESTRAL SPECIES	13	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Golden eagle	MODERN SPECIES	1	LXN (ENSACCG00020001533)	GFM1 (ENSACCG00020001505)	ENSACCG00020001466	ENSACCG00020001412	SHOX2 (ENSACCG00020001394)	ENSACCG00020001370	PTX3 (ENSACCG00020001339)	VEPH1 (ENSACCG00020001324)	CCNL1 (ENSACCG00020001281)	LEKR1 (ENSACCG00020001243)	TIPARP (ENSACCG00020001217) #15	SSR3 (ENSACCG00020001198) #16	KCNAB1 (ENSACCG00020001172) #17	GMPS (ENSACCG00020001127) #19	SLC33A1 (ENSACCG00020001098) #21	C3orf33 (ENSACCG00020001078) #22	PLCH1 (ENSACCG00020001034) #23	ENSACCG00020001003	MME (ENSACCG00020000944) #25	GPR149 (ENSACCG00020000890) #26	DHX36 (ENSACCG00020000846) #27	ARHGEF26 (ENSACCG00020000809) #28	RAP2B (ENSACCG00020000788) #29	P2RY1 (ENSACCG00020000776) #30	MBNL1 (ENSACCG00020000739) #31	ENSACCG00020000688	SUCNR1 (ENSACCG00020000665) #32	AADAC (ENSACCG00020000652) #33	IGSF10 (ENSACCG00020000574) #35	P2RY12 (ENSACCG00020005071) #37	P2RY13 (ENSACCG00020005065) ##37
African ostrich	MODERN SPECIES	390	RARRES1 (ENSSCUG00000002614)	LXN (ENSSCUG00000002613)	GFM1 (ENSSCUG00000002605)	MLF1 (ENSSCUG00000002592)	ENSSCUG00000002589	ENSSCUG00000002586	PTX3 (ENSSCUG00000002584)	VEPH1 (ENSSCUG00000002582)	CCNL1 (ENSSCUG00000002573)	LEKR1 (ENSSCUG00000002565)	ENSSCUG00000002561	TIPARP (ENSSCUG00000002559) #15	SSR3 (ENSSCUG00000002556) #16	GMPS (ENSSCUG00000002543) #19	SLC33A1 (ENSSCUG00000002533) #21	C3orf33 (ENSSCUG00000002525) #22	PLCH1 (ENSSCUG00000002520) #23	MME (ENSSCUG00000002517) #25
Australian saltwater crocodile	MODERN SPECIES	30	GFM1 (ENSCPRG00005007644)	MLF1 (ENSCPRG00005007594)	RSRC1 (ENSCPRG00005007591)	SHOX2 (ENSCPRG00005007578)	ENSCPRG00005007569	PTX3 (ENSCPRG00005007560)	VEPH1 (ENSCPRG00005007546)	CCNL1 (ENSCPRG00005007539)	LEKR1 (ENSCPRG00005007525)	ENSCPRG00005007521 #14	TIPARP (ENSCPRG00005007501) #15	SSR3 (ENSCPRG00005007494) #16	KCNAB1 (ENSCPRG00005007460) #17	GMPS (ENSCPRG00005007269) #19	SLC33A1 (ENSCPRG00005007251) #21	C3orf33 (ENSCPRG00005007249) #22	PLCH1 (ENSCPRG00005007105) #23	MME (ENSCPRG00005007060) #25	GPR149 (ENSCPRG00005007044) #26	DHX36 (ENSCPRG00005007029) #27	ARHGEF26 (ENSCPRG00005007023) #28	RAP2B (ENSCPRG00005007004) #29	P2RY1 (ENSCPRG00005007002) #30	MBNL1 (ENSCPRG00005006983) #31	SUCNR1 (ENSCPRG00005006969) #32	AADAC (ENSCPRG00005006960) #33	IGSF10 (ENSCPRG00005006947) #35	P2RY12 (ENSCPRG00005006944) #37	P2RY13 (ENSCPRG00005006940) ##37	GPR87 (ENSCPRG00005006938) ##37	P2RY14 (ENSCPRG00005006934) ##37
Cryptodira	ANCESTRAL SPECIES	16	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Testudinoidea	ANCESTRAL SPECIES	9	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Emydidae	ANCESTRAL SPECIES	3	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
painted turtle	MODERN SPECIES	2423	MLF1 (ENSCPBG00000018371)	ENSCPBG00000018373	SHOX2 (ENSCPBG00000018375)	ENSCPBG00000018381	VEPH1 (ENSCPBG00000018387)	PTX3 (ENSCPBG00000018395)	CCNL1 (ENSCPBG00000018400)	LEKR1 (ENSCPBG00000018407)	TIPARP (ENSCPBG00000018420) #15	SSR3 (ENSCPBG00000018423) #16	KCNAB1 (ENSCPBG00000018428) #17	ENSCPBG00000018435	ENSCPBG00000018447	GMPS (ENSCPBG00000018525) #19	SLC33A1 (ENSCPBG00000018529) #21	C3orf33 (ENSCPBG00000018534) #22	PLCH1 (ENSCPBG00000018581) #23	MME (ENSCPBG00000018771) #25	GPR149 (ENSCPBG00000018780) #26	DHX36 (ENSCPBG00000018783) #27	ADAM20 (ENSCPBG00000018787)	ARHGEF26 (ENSCPBG00000018793) #28	ENSCPBG00000018802	P2RY1 (ENSCPBG00000018803) #30	MBNL1 (ENSCPBG00000018808) #31	SUCNR1 (ENSCPBG00000018811) #32	AADAC (ENSCPBG00000018813) #33	IGSF10 (ENSCPBG00000018816) #35	MED12L (ENSCPBG00000018827) #36	P2RY12 (ENSCPBG00000018838) #37	P2RY13 (ENSCPBG00000018839) ##37
Three-toed box turtle	MODERN SPECIES	32	GFM1 (ENSTMTG00000003990)	MLF1 (ENSTMTG00000003966)	SHOX2 (ENSTMTG00000003924)	ENSTMTG00000003903	ENSTMTG00000003885	PTX3 (ENSTMTG00000003870)	CCNL1 (ENSTMTG00000003843)	LEKR1 (ENSTMTG00000003806)	ENSTMTG00000003797 #14	TIPARP (ENSTMTG00000003776) #15	SSR3 (ENSTMTG00000003756) #16	KCNAB1 (ENSTMTG00000003735) #17	ENSTMTG00000003217	GMPS (ENSTMTG00000003156) #19	SLC33A1 (ENSTMTG00000003141) #21	C3orf33 (ENSTMTG00000003126) #22	PLCH1 (ENSTMTG00000003000) #23	ENSTMTG00000002984	MME (ENSTMTG00000002970) #25	GPR149 (ENSTMTG00000002963) #26	DHX36 (ENSTMTG00000002945) #27	ENSTMTG00000002939	ARHGEF26 (ENSTMTG00000002930) #28	RAP2B (ENSTMTG00000002923) #29	P2RY1 (ENSTMTG00000002918) #30	MBNL1 (ENSTMTG00000002899) #31	SUCNR1 (ENSTMTG00000002889) #32	AADAC (ENSTMTG00000002883) #33	IGSF10 (ENSTMTG00000002805) #35	P2RY12 (ENSTMTG00000002791) #37	P2RY13 (ENSTMTG00000002784) ##37
Testudinidae	ANCESTRAL SPECIES	7	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT00440000037505.a #36	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Abingdon island giant tortoise	MODERN SPECIES	1249												KCNAB1 (ENSCABG00000002069) #17	ENSCABG00000002066	GMPS (ENSCABG00000002041) #19	SLC33A1 (ENSCABG00000002009) #21	C3orf33 (ENSCABG00000001981) #22	PLCH1 (ENSCABG00000001970) #23	ENSCABG00000001967	MME (ENSCABG00000001963) #25	GPR149 (ENSCABG00000001959) #26	DHX36 (ENSCABG00000000855) #27	ENSCABG00000000799	ARHGEF26 (ENSCABG00000000792) #28	RAP2B (ENSCABG00000000777) #29	P2RY1 (ENSCABG00000000774) #30	MBNL1 (ENSCABG00000000760) #31	SUCNR1 (ENSCABG00000000751) #32
Goode s thornscrub tortoise	MODERN SPECIES	23	MLF1 (ENSGEVG00005007034)	ENSGEVG00005007057	SHOX2 (ENSGEVG00005007084)	ENSGEVG00005007142	ENSGEVG00005007163	PTX3 (ENSGEVG00005007195)	CCNL1 (ENSGEVG00005007228)	LEKR1 (ENSGEVG00005007259)	ENSGEVG00005007292 #14	TIPARP (ENSGEVG00005007304) #15	SSR3 (ENSGEVG00005007317) #16	KCNAB1 (ENSGEVG00005007345) #17	ENSGEVG00005007450	GMPS (ENSGEVG00005007539) #19	SLC33A1 (ENSGEVG00005007570) #21	C3orf33 (ENSGEVG00005007608) #22	PLCH1 (ENSGEVG00005007682) #23	ENSGEVG00005007858	MME (ENSGEVG00005007888) #25	GPR149 (ENSGEVG00005008015) #26	DHX36 (ENSGEVG00005008060) #27	ARHGEF26 (ENSGEVG00005008115) #28	RAP2B (ENSGEVG00005008169) #29	P2RY1 (ENSGEVG00005008183) #30	MBNL1 (ENSGEVG00005008219) #31	SUCNR1 (ENSGEVG00005008269) #32	AADAC (ENSGEVG00005008292) #33	IGSF10 (ENSGEVG00005008410) #35	MED12L (ENSGEVG00005008629) #36	P2RY13 (ENSGEVG00005008753) ##37	GPR87 (ENSGEVG00005008779) ##37
Chinese turtle	MODERN SPECIES	1130	SHOX2 (ENSPSIG00000004319)	ENSPSIG00000004391	VEPH1 (ENSPSIG00000004402)	PTX3 (ENSPSIG00000004651)	ENSPSIG00000004707	CCNL1 (ENSPSIG00000004759)	LEKR1 (ENSPSIG00000005103)	ENSPSIG00000005121	ENSPSIG00000005143 #14	TIPARP (ENSPSIG00000005160) #15	SSR3 (ENSPSIG00000005346) #16	KCNAB1 (ENSPSIG00000005640) #17	ENSPSIG00000007102	GMPS (ENSPSIG00000007196) #19	SLC33A1 (ENSPSIG00000008579) #21	C3orf33 (ENSPSIG00000008805) #22	PLCH1 (ENSPSIG00000008812) #23	MME (ENSPSIG00000010434) #25	ENSPSIG00000000971	GPR149 (ENSPSIG00000012627) #26	DHX36 (ENSPSIG00000012755) #27	ENSPSIG00000012875	ARHGEF26 (ENSPSIG00000012932) #28
Lepidosauria	ANCESTRAL SPECIES	12	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Episquamata	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00940000178902	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b.d	ENSGT00950000183207.b.c.b.c.b	ENSGT00950000183207.b.c.b.c.a	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35
Elapidae_a	ANCESTRAL SPECIES		ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b.d	ENSGT00950000183207.b.c.b.c.b	ENSGT00950000183207.b.c.b.c.a	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b.d	ENSGT00950000183207.b.c.b.c.b	ENSGT00950000183207.b.c.b.c.a	ENSGT00940000156745 #25	ENSGT00990000212711	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33
Eastern brown snake	MODERN SPECIES	29	ENSPTXG00000013541	RSRC1 (ENSPTXG00000013543)	SHOX2 (ENSPTXG00000013546)	ENSPTXG00000013547	ENSPTXG00000013548	PTX3 (ENSPTXG00000013549)	CCNL1 (ENSPTXG00000013550)	ENSPTXG00000013552	ENSPTXG00000013553 #14	TIPARP (ENSPTXG00000013554) #15	SSR3 (ENSPTXG00000013556) #16	KCNAB1 (ENSPTXG00000013558) #17	ENSPTXG00000013560	GMPS (ENSPTXG00000013562) #19	SLC33A1 (ENSPTXG00000013564) #21	C3orf33 (ENSPTXG00000013565) #22	PLCH1 (ENSPTXG00000013567) #23	ENSPTXG00000013568	ENSPTXG00000013569
Mainland tiger snake	MODERN SPECIES		MLF1 (ENSNSUG00000018827)	SHOX2 (ENSNSUG00000018826)	ENSNSUG00000018825	ENSNSUG00000018824	PTX3 (ENSNSUG00000018823)	CCNL1 (ENSNSUG00000018821)	ENSNSUG00000018820	ENSNSUG00000018819	TIPARP (ENSNSUG00000018818) #15	SSR3 (ENSNSUG00000018817) #16	KCNAB1 (ENSNSUG00000018814) #17	ENSNSUG00000018586	GMPS (ENSNSUG00000018581) #19	SLC33A1 (ENSNSUG00000018579) #21	ENSNSUG00000018578	C3orf33 (ENSNSUG00000018576) #22	PLCH1 (ENSNSUG00000018574) #23	ENSNSUG00000018573	ENSNSUG00000018572	ENSNSUG00000018570	ENSNSUG00000018567	MME (ENSNSUG00000018560) #25	ENSNSUG00000018558	GPR149 (ENSNSUG00000018557) #26	DHX36 (ENSNSUG00000018534) #27	ARHGEF26 (ENSNSUG00000018513) #28	RAP2B (ENSNSUG00000018512) #29	P2RY1 (ENSNSUG00000018511) #30	MBNL1 (ENSNSUG00000018510) #31	SUCNR1 (ENSNSUG00000018508) #32	AADAC (ENSNSUG00000018506) #33
Blue-lipped sea krait	MODERN SPECIES	7544																ENSLLTG00000005403 #22
Indian cobra	MODERN SPECIES	3	RSRC1 (ENSNNAG00000004026)	SHOX2 (ENSNNAG00000003957)	ENSNNAG00000003943	ENSNNAG00000003910	PTX3 (ENSNNAG00000003894)	CCNL1 (ENSNNAG00000003834)	ENSNNAG00000003816	ENSNNAG00000003789	TIPARP (ENSNNAG00000003776) #15	SSR3 (ENSNNAG00000003750) #16	KCNAB1 (ENSNNAG00000003738) #17	ENSNNAG00000003709 #17	ENSNNAG00000003654	GMPS (ENSNNAG00000003593) #19	SLC33A1 (ENSNNAG00000003569) #21	C3orf33 (ENSNNAG00000003552) #22	PLCH1 (ENSNNAG00000003522) #23	ENSNNAG00000003510	ENSNNAG00000003501	ENSNNAG00000003480	ENSNNAG00000003459	MME (ENSNNAG00000003372) #25	GPR149 (ENSNNAG00000003351) #26	DHX36 (ENSNNAG00000003262) #27	ARHGEF26 (ENSNNAG00000003235) #28	RAP2B (ENSNNAG00000003226) #29	P2RY1 (ENSNNAG00000003197) #30	MBNL1 (ENSNNAG00000003111) #31	SUCNR1 (ENSNNAG00000003061) #32	AADAC (ENSNNAG00000014973) #33	ENSNNAG00000014963 #35
Lizard	MODERN SPECIES	2	PTX3 (ENSACAG00000039556)	ENSACAG00000039237	ENSACAG00000044882	CCNL1 (ENSACAG00000001547)	LEKR1 (ENSACAG00000023624)	TIPARP (ENSACAG00000001488) #15	SSR3 (ENSACAG00000040361) #16	ENSACAG00000028304	KCNAB1 (ENSACAG00000000831) #17	ENSACAG00000045220	ENSACAG00000029010	ENSACAG00000036237	ENSACAG00000000779	GMPS (ENSACAG00000000556) #19	SLC33A1 (ENSACAG00000000483) #21	C3orf33 (ENSACAG00000039040) #22	PLCH1 (ENSACAG00000004239) #23	ENSACAG00000042678	ENSACAG00000004167	MME (ENSACAG00000003903) #25	ENSACAG00000040679	GPR149 (ENSACAG00000006974) #26	DHX36 (ENSACAG00000006905) #27	ARHGEF26 (ENSACAG00000006849) #28	RAP2B (ENSACAG00000011260) #29	P2RY1 (ENSACAG00000011271) #30	MBNL1 (ENSACAG00000029116) #31	SUCNR1 (ENSACAG00000029121) #32	AADAC (ENSACAG00000008002) #33	IGSF10 (ENSACAG00000007981) #35	ENSACAG00000007814 #36
Laterata	ANCESTRAL SPECIES		ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37
Common wall lizard	MODERN SPECIES	13	MLF1 (ENSPMRG00000003927)	RSRC1 (ENSPMRG00000003920)	SHOX2 (ENSPMRG00000003913)	ENSPMRG00000003907	ENSPMRG00000003905	PTX3 (ENSPMRG00000010050)	VEPH1 (ENSPMRG00000010035)	LEKR1 (ENSPMRG00000010016)	TIPARP (ENSPMRG00000009998) #15	SSR3 (ENSPMRG00000009989) #16	ENSPMRG00000009983	KCNAB1 (ENSPMRG00000009966) #17	ENSPMRG00000009953	GMPS (ENSPMRG00000009928) #19	SLC33A1 (ENSPMRG00000009920) #21	C3orf33 (ENSPMRG00000009919) #22	PLCH1 (ENSPMRG00000009890) #23	ENSPMRG00000009875	ENSPMRG00000009866	MME (ENSPMRG00000009855) #25	GPR149 (ENSPMRG00000009850) #26	DHX36 (ENSPMRG00000009836) #27	ARHGEF26 (ENSPMRG00000009827) #28	RAP2B (ENSPMRG00000009822) #29	P2RY1 (ENSPMRG00000009816) #30	ENSPMRG00000009811	MBNL1 (ENSPMRG00000009794) #31	ENSPMRG00000009779	SUCNR1 (ENSPMRG00000009774) #32	AADAC (ENSPMRG00000009763) #33	IGSF10 (ENSPMRG00000009740) #35
Argentine black and white tegu	MODERN SPECIES	21	LXN (ENSSMRG00000001436)	MLF1 (ENSSMRG00000001439)	RSRC1 (ENSSMRG00000001470)	SHOX2 (ENSSMRG00000001482)	VEPH1 (ENSSMRG00000001521)	PTX3 (ENSSMRG00000001575)	CCNL1 (ENSSMRG00000001583)	LEKR1 (ENSSMRG00000001605)	ENSSMRG00000001629	TIPARP (ENSSMRG00000001646) #15	SSR3 (ENSSMRG00000001650) #16	KCNAB1 (ENSSMRG00000001682) #17	ENSSMRG00000002028	GMPS (ENSSMRG00000003393) #19	SLC33A1 (ENSSMRG00000003412) #21	C3orf33 (ENSSMRG00000003415) #22	PLCH1 (ENSSMRG00000003423) #23	ENSSMRG00000003436	ENSSMRG00000003439	MME (ENSSMRG00000003452) #25	GPR149 (ENSSMRG00000003478) #26	DHX36 (ENSSMRG00000003496) #27	ARHGEF26 (ENSSMRG00000003502) #28	RAP2B (ENSSMRG00000003512) #29	P2RY1 (ENSSMRG00000003521) #30	MBNL1 (ENSSMRG00000003536) #31	SUCNR1 (ENSSMRG00000003560) #32	AADAC (ENSSMRG00000003580) #33	IGSF10 (ENSSMRG00000003584) #35	MED12L (ENSSMRG00000003588) #36	P2RY12 (ENSSMRG00000004783) #37
tuatara	MODERN SPECIES	1215					ENSSPUG00000015823	PTX3 (ENSSPUG00000015818)	VEPH1 (ENSSPUG00000015803)	CCNL1 (ENSSPUG00000015793)	LEKR1 (ENSSPUG00000015780)	TIPARP (ENSSPUG00000015764) #15	SSR3 (ENSSPUG00000015748) #16	KCNAB1 (ENSSPUG00000015736) #17	ENSSPUG00000015567	ENSSPUG00000015523 #19	SLC33A1 (ENSSPUG00000015504) #21	C3orf33 (ENSSPUG00000015495) #22	PLCH1 (ENSSPUG00000015450) #23	ENSSPUG00000015438	MME (ENSSPUG00000015405) #25
Anura	ANCESTRAL SPECIES	13	ENSGT00730000111251	ENSGT00940000154287.b	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a	ENSGT00940000169328.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368.md #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT01100000263565.b.b	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT01100000263536.B.d	ENSGT00940000155975 #33	ENSGT00940000158290 #35	ENSGT01060000248592.E #37	ENSGT01060000248592.B ##37	ENSGT01060000248592.D ##37
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000013793	ENSLLEG00000013711	CCNL1 (ENSLLEG00000013395)	ENSLLEG00000013369	LEKR1 (ENSLLEG00000012851)	TIPARP (ENSLLEG00000012757) #15	ENSLLEG00000012737	SSR3 (ENSLLEG00000012692) #16	ENSLLEG00000012674	KCNAB1 (ENSLLEG00000012432) #17	ENSLLEG00000012374	ENSLLEG00000012287	ENSLLEG00000010956	GMPS (ENSLLEG00000010429) #19	SLC33A1 (ENSLLEG00000010196) #21	C3orf33 (ENSLLEG00000010088) #22	PLCH1 (ENSLLEG00000009486) #23	ENSLLEG00000009362	ENSLLEG00000009341	GPR149 (ENSLLEG00000009282) #26	DHX36 (ENSLLEG00000008869) #27	ARHGEF26 (ENSLLEG00000008442) #28	ENSLLEG00000008368	ENSLLEG00000008321	RAP2B (ENSLLEG00000008271) #29	ENSLLEG00000008254	ENSLLEG00000008230	ENSLLEG00000008215	ENSLLEG00000008194	ENSLLEG00000008146	ENSLLEG00000008112
Coelacanth	MODERN SPECIES	233	ENSLACG00000017961	ENSLACG00000017783	MVB12B (ENSLACG00000016934)	LMX1B (ENSLACG00000016220)	ZBTB43 (ENSLACG00000015621)	ZBTB34 (ENSLACG00000015537)	ANGPTL2 (ENSLACG00000014379)	VEPH1 (ENSLACG00000013468)	CCNL1 (ENSLACG00000013133)	LEKR1 (ENSLACG00000012224)	TIPARP (ENSLACG00000011215) #15	SSR3 (ENSLACG00000010812) #16	ENSLACG00000008495	GMPS (ENSLACG00000007529) #19	SLC33A1 (ENSLACG00000007165) #21	C3orf33 (ENSLACG00000006630) #22	PLCH1 (ENSLACG00000003777) #23	ENSLACG00000003042	ENSLACG00000002430	ENSLACG00000001166
Actinopterygii	ANCESTRAL SPECIES	10	ENSGT01100000263515.a.b.a.a	ENSGT00940000174128.B	ENSGT00940000169328.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000164154 #14	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT01100000263565.b.b	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000263565.b.a.a.b	ENSGT01100000263565.b.a.b.a	ENSGT01100000263565.b.a.b.b.a.a	ENSGT00940000156745.a #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000162467.a.b	ENSGT00390000005492.d	ENSGT01100000263536.B.d
Neopterygii	ANCESTRAL SPECIES	17	ENSGT00940000164637	ENSGT00940000163939	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760 #17	ENSGT00940000160473	ENSGT01100000263565.b.b	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000263565.b.a.a.b	ENSGT01050000244874.a.a.b	ENSGT01100000263565.b.a.b.a	ENSGT01100000263565.b.a.b.b.a.a	ENSGT00940000156745.a #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #30	ENSGT00950000182897.B.a.a #31	ENSGT01030000234621.A #32	ENSGT00940000162467.a.b	ENSGT00390000005492.d
Osteoglossocephalai	ANCESTRAL SPECIES	12	ENSGT00940000164637	ENSGT00940000163939	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000169328.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.b.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b
Clupeocephala	ANCESTRAL SPECIES	10	ENSGT00940000164637	ENSGT00940000163939	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000169328.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b	ENSGT01050000244874.a.a.a.b.a.a.b
Otomorpha	ANCESTRAL SPECIES	58	ENSGT00940000158168	ENSGT00390000015980	ENSGT00940000164637.ab	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a.c	ENSGT00940000159135.g	ENSGT00940000162647	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b	ENSGT01050000244874.a.a.a.b.a.a.b	ENSGT01100000263565.b.a.b.a
Clupeiformes	ANCESTRAL SPECIES	59	ENSGT00390000017913	ENSGT00940000158168	ENSGT00390000015980	ENSGT00940000164637.ab	ENSGT00940000163939	ENSGT00390000018660	ENSGT01100000263515.a.b.a.a.c	ENSGT00940000159135.g	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.b.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b	ENSGT01050000244874.a.a.a.b.a.a.b	ENSGT01100000263565.b.a.b.a	ENSGT01100000263565.b.a.b.b.a.a
Denticle herring	MODERN SPECIES	10	pdcd10a (ENSDCDG00000033772)	serpini1 (ENSDCDG00000033787)	ENSDCDG00000033791	ENSDCDG00000033794	ENSDCDG00000033799	veph1 (ENSDCDG00000033800)	PTX3 (ENSDCDG00000033807)	ccnl1a (ENSDCDG00000033814)	LEKR1 (ENSDCDG00000033925)	tiparp (ENSDCDG00000033932) #15	ssr3 (ENSDCDG00000033934) #16	KCNAB1 (ENSDCDG00000033942) #17	ENSDCDG00000033970	gmps (ENSDCDG00000023193) #19	slc33a1 (ENSDCDG00000023875) #21	c18h3orf33 (ENSDCDG00000023877) #22	PLCH1 (ENSDCDG00000023888) #23	ENSDCDG00000024000	ENSDCDG00000024005	ENSDCDG00000024028	ENSDCDG00000024132	ENSDCDG00000024141	olfcu1 (ENSDCDG00000024149)	ENSDCDG00000024263	ENSDCDG00000024271	ENSDCDG00000024273	ENSDCDG00000024278	ENSDCDG00000024320	ENSDCDG00000024584	ENSDCDG00000024873	ENSDCDG00000025093
Atlantic herring	MODERN SPECIES	25	serpini1 (ENSCHAG00000014217)	ENSCHAG00000014263	golim4a (ENSCHAG00000014307)	ENSCHAG00000014320	veph1 (ENSCHAG00000014331)	PTX3 (ENSCHAG00000014406)	ENSCHAG00000014413	ccnl1a (ENSCHAG00000014435)	ENSCHAG00000014573	tiparp (ENSCHAG00000014600) #15	ssr3 (ENSCHAG00000014611) #16	KCNAB1 (ENSCHAG00000014685) #17	ENSCHAG00000015878	gmps (ENSCHAG00000016061) #19	slc33a1 (ENSCHAG00000016285) #21	c18h3orf33 (ENSCHAG00000016303) #22	PLCH1 (ENSCHAG00000016341) #23	ENSCHAG00000016606	ENSCHAG00000016846	ENSCHAG00000017041	ENSCHAG00000017278	ENSCHAG00000017307	olfcu1 (ENSCHAG00000017401)	ENSCHAG00000017447	ENSCHAG00000017612	ENSCHAG00000017778	ENSCHAG00000017923	ENSCHAG00000017983	ENSCHAG00000018046	ENSCHAG00000018066	ENSCHAG00000018222
Otophysi	ANCESTRAL SPECIES	204						ENSGT01100000263515.a.b.a.a.c	ENSGT00390000018660	ENSGT00940000159135.g	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.e.b	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.b.a.b.e.a	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b	ENSGT01050000244874.a.a.a.b.a.a.b
Characiphysae	ANCESTRAL SPECIES	84					ENSGT01100000263515.a.b.a.a.c	ENSGT00390000018660	ENSGT00940000162060.c	ENSGT00940000159135.g	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.e.b	ENSGT01050000244874.a.a.a.b.a.a.a.b.h	ENSGT01050000244874.a.a.a.b.a.b.e.a	ENSGT01050000244874.a.a.a.b.a.a.a.b.g.a.a	ENSGT01050000244874.a.a.a.b.a.a.a.b.g.a.b	ENSGT01050000244874.a.a.a.a
Channel catfish	MODERN SPECIES	23	tuba1a (ENSIPUG00000015665)	ENSIPUG00000015640	CHST8 (ENSIPUG00000015627)	pepd (ENSIPUG00000015536)	ptx3 (ENSIPUG00000015521)	veph1 (ENSIPUG00000015485)	ENSIPUG00000015472	ccnl1 (ENSIPUG00000015420)	ENSIPUG00000015355	tiparp (ENSIPUG00000015335) #15	ssr3 (ENSIPUG00000015293) #16	Kcnab1 (ENSIPUG00000015241) #17	ENSIPUG00000015178	gmps (ENSIPUG00000015059) #19	slc33a1 (ENSIPUG00000015034) #21	c4h3orf33 (ENSIPUG00000014991) #22	plch1 (ENSIPUG00000014937) #23	ENSIPUG00000014909	ENSIPUG00000014894	ENSIPUG00000014877	ENSIPUG00000014862	ENSIPUG00000014584	ENSIPUG00000014554	ENSIPUG00000014354	ENSIPUG00000014312	ENSIPUG00000014293	ENSIPUG00000014284	ENSIPUG00000014023	ENSIPUG00000013953	ENSIPUG00000013923	ENSIPUG00000013704
Characiphysae_b	ANCESTRAL SPECIES	85	ENSGT00950000183181.B.b.l.b	ENSGT01100000263564.a	ENSGT00990000204162	ENSGT01100000263515.a.b.a.a.c	ENSGT00390000018660	ENSGT00940000162060.c	ENSGT00940000159135.g	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000156760.f #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.e.b	ENSGT01050000244874.a.a.a.b.a.a.a.b.h	ENSGT01050000244874.a.a.a.b.a.b.e.a	ENSGT01050000244874.a.a.a.b.a.a.a.b.g.a.a	ENSGT01050000244874.a.a.a.b.a.a.a.b.g.a.b	ENSGT01050000244874.a.a.a.a
Electric eel	MODERN SPECIES	730												ENSEEEG00000010676	ENSEEEG00000010529	gmps (ENSEEEG00000010080) #19	slc33a1 (ENSEEEG00000010062) #21	c18h3orf33 (ENSEEEG00000010059) #22	ENSEEEG00000010057 #23	ENSEEEG00000010052
Characoidei	ANCESTRAL SPECIES	98	ENSGT00950000183181.B.b.l.b	ENSGT01100000263564.a	ENSGT00990000204162	ENSGT01100000263515.a.b.a.a.c	ENSGT00390000018660	ENSGT00940000162060.c	ENSGT00940000159135.g	ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000156760.f #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT01100000263565.b.a.b.b.a.a.c.a	ENSGT01100000263565.b.a.b.b.a.a.c.b.a	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991.kb	ENSGT00940000163991.jb	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.e.b	ENSGT01050000244874.a.a.a.b.a.a.a.b.h	ENSGT01050000244874.a.a.a.b.a.b.e.a
Red-bellied piranha	MODERN SPECIES	253				PTX3 (ENSPNAG00000013831)	veph1 (ENSPNAG00000013868)	ENSPNAG00000013878	ccnl1a (ENSPNAG00000013922)	ENSPNAG00000013954	tiparp (ENSPNAG00000013979) #15	ssr3 (ENSPNAG00000014010) #16	KCNAB1 (ENSPNAG00000014158) #17	ENSPNAG00000014187	ENSPNAG00000014211	gmps (ENSPNAG00000014256) #19	slc33a1 (ENSPNAG00000004861) #21	c18h3orf33 (ENSPNAG00000003076) #22	PLCH1 (ENSPNAG00000014356) #23	ENSPNAG00000014373	ENSPNAG00000007110	ENSPNAG00000014407	ENSPNAG00000003119	ENSPNAG00000014464	olfcq3 (ENSPNAG00000003166)	olfcu1 (ENSPNAG00000014570)	ENSPNAG00000003182	ENSPNAG00000014654	ENSPNAG00000015094	ENSPNAG00000015162	ENSPNAG00000003377
Mexicana tetra	MODERN SPECIES	9	ENSAMXG00000040836	ENSAMXG00000025906	ENSAMXG00000037258	veph1 (ENSAMXG00000010844)	PTX3 (ENSAMXG00000041282)	ENSAMXG00000038923	ENSAMXG00000010827	ccnl1a (ENSAMXG00000010800)	ENSAMXG00000037577	TIPARP (ENSAMXG00000033452) #15	ssr3 (ENSAMXG00000034367) #16	kcnab1a (ENSAMXG00000043084) #17	ENSAMXG00000030419	gmps (ENSAMXG00000029474) #19	slc33a1 (ENSAMXG00000035355) #21	c18h3orf33 (ENSAMXG00000040372) #22	PLCH1 (ENSAMXG00000020205) #23	ENSAMXG00000020182	ENSAMXG00000020169	ENSAMXG00000041414	ENSAMXG00000020151	ENSAMXG00000041562	ENSAMXG00000030305	ENSAMXG00000020160	ENSAMXG00000020144	olfcq3 (ENSAMXG00000020111)	olfcu1 (ENSAMXG00000020101)	ENSAMXG00000037521	ENSAMXG00000037480	ENSAMXG00000020097	ENSAMXG00000020096
Cyprinoidei	ANCESTRAL SPECIES	101									ENSGT00940000165173	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000162782.s.a.a.a.a.a.a.a.b.b	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.a.a	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.a.b	ENSGT00940000162782.s.a.a.a.a.a.a.a.b.a	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.b	ENSGT00940000162782.s.a.a.a.a.b	ENSGT00940000162782.s.a.a.b	ENSGT00940000162782.s.a.b	ENSGT00940000162782.s.a.a.a.b.b	ENSGT01050000244874.a.a.a.b.a.a.b.i.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.a.b.f	ENSGT01050000244874.a.a.a.b.a.b.e.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	857														ENSGT00390000006591.t #19	ENSGT00940000154019.a.d #21	ENSGT00390000004493.e #22	ENSGT00940000157185.a.a #23	ENSGT00940000165453	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.a.a	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.a.b
Cyprininae_a	ANCESTRAL SPECIES	355														ENSGT00390000006591.t #19	ENSGT00940000154019.a.d #21	ENSGT00390000004493.e #22	ENSGT00940000157185.a.a #23	ENSGT00940000165453	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.a.a	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.a.b	ENSGT01100000263565.b.a.b.b.a.b.e.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.f	ENSGT01100000263565.b.a.b.b.b.m.a	ENSGT01100000263565.b.a.b.b.a.b.e.a	ENSGT01050000244874.a.a.a.b.a.b.e.b	ENSGT01050000244874.a.a.a.b.a.a.a.b.f	ENSGT01050000244874.a.a.a.b.a.b.e.a	ENSGT01050000244874.a.a.a.b.a.a.a.b.e.a	ENSGT01050000244874.a.a.a.b.a.a.b.i.a.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.b.i.a.b
Golden-line barbel	MODERN SPECIES	590														gmps (ENSSGRG00000023142) #19	slc33a1 (ENSSGRG00000023141) #21	c18h3orf33 (ENSSGRG00000023139) #22	PLCH1 (ENSSGRG00000023137) #23	ENSSGRG00000023132	olfcq19 (ENSSGRG00000023130)	ENSSGRG00000023129	ENSSGRG00000023127	ENSSGRG00000023126	ENSSGRG00000023125	ENSSGRG00000023124	ENSSGRG00000023086	ENSSGRG00000023085	ENSSGRG00000023084	ENSSGRG00000023083
Common carp reference	MODERN SPECIES	9	opa3 (ENSCCRG00000081683)	ENSCCRG00000030587	rasgrp4 (ENSCCRG00000019216)	ryr1b (ENSCCRG00000072696)	itpkcb (ENSCCRG00000076850)	snrpa (ENSCCRG00000036823)	tbrg1 (ENSCCRG00000011786)	cfap45 (ENSCCRG00000023501)	ENSCCRG00000059068	ssr3 (ENSCCRG00000067142) #16	tiparp (ENSCCRG00000003020) #15	KCNAB1 (ENSCCRG00000016900) #17	gmps (ENSCCRG00000042242) #19	slc33a1 (ENSCCRG00000042238) #21	ENSCCRG00000078576	c18h3orf33 (ENSCCRG00000042227) #22	PLCH1 (ENSCCRG00000028982) #23	ENSCCRG00000081273	ENSCCRG00000053022	ENSCCRG00000064014	olfcq19 (ENSCCRG00000074976)	ENSCCRG00000005726	ENSCCRG00000075329	ENSCCRG00000070172	ENSCCRG00000079598	ENSCCRG00000015668	ENSCCRG00000078427	ENSCCRG00000052663	ENSCCRG00000068691	ENSCCRG00000053595	ENSCCRG00000060076
Goldfish	MODERN SPECIES	37	si:ch211-132b12.7 (ENSCARG00000068616)	ccnp (ENSCARG00000068588)	akt2 (ENSCARG00000068546)	VASP (ENSCARG00000068501)	snrpd2 (ENSCARG00000068466)	ENSCARG00000068461	pglyrp5 (ENSCARG00000068450)	polr2i (ENSCARG00000068427)	ENSCARG00000068419	tiparp (ENSCARG00000068409) #15	ssr3 (ENSCARG00000068399) #16	ENSCARG00000068393	kcnab1a (ENSCARG00000068358) #17	gmps (ENSCARG00000068231) #19	slc33a1 (ENSCARG00000068205) #21	c18h3orf33 (ENSCARG00000068178) #22	PLCH1 (ENSCARG00000067074) #23	ENSCARG00000066925	ENSCARG00000066913	ENSCARG00000066908	ENSCARG00000066896	olfcq19 (ENSCARG00000066888)	ENSCARG00000066878	ENSCARG00000066873	ENSCARG00000066857	ENSCARG00000066826	ENSCARG00000066797	ENSCARG00000066789	ENSCARG00000066710	ENSCARG00000066704	ENSCARG00000066688
Cyprininae	ANCESTRAL SPECIES	209									ENSGT00940000165173	ENSGT00940000155368.e #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591.s #19	ENSGT00940000154019.a.c #21	ENSGT00390000004493.f #22	ENSGT00940000157185.a.b #23	ENSGT00940000162782.s.a.a.a.a.a.a.a.b.b	ENSGT00940000162782.s.a.a.a.a.a.a.a.b.a	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.b	ENSGT00940000162782.s.a.a.a.a.b	ENSGT00940000162782.s.a.a.b	ENSGT00940000162782.s.a.b	ENSGT00940000162782.s.a.a.a.b.b	ENSGT00940000162782.s.a.a.a.b.a.b	ENSGT00940000162782.s.a.a.a.a.a.a.b	ENSGT01100000263565.b.a.b.b.b.m.a	ENSGT01100000263565.b.a.b.b.a.b.e.a	ENSGT01050000244874.a.a.a.b.a.b.e.b	ENSGT01100000263565.b.a.b.b.a.b.f	ENSGT01100000263565.b.a.b.b.b.n
Goldfish	MODERN SPECIES	9	ENSCARG00000013198	ENSCARG00000013213	kti12 (ENSCARG00000013224)	nmba (ENSCARG00000013245)	sec11a (ENSCARG00000013258)	znf592 (ENSCARG00000013277)	ENSCARG00000013283	ENSCARG00000013290	tiparp (ENSCARG00000013296) #15	ssr3 (ENSCARG00000013298) #16	KCNAB1 (ENSCARG00000013321) #17	ENSCARG00000013653	gmps (ENSCARG00000013666) #19	ENSCARG00000013721	slc33a1 (ENSCARG00000013728) #21	c18h3orf33 (ENSCARG00000013737) #22	PLCH1 (ENSCARG00000013908) #23	ENSCARG00000016558	ENSCARG00000016566	ENSCARG00000016588	ENSCARG00000016624	ENSCARG00000016646	ENSCARG00000016670	ENSCARG00000016683	ENSCARG00000016689	olfcq3 (ENSCARG00000016707)	ENSCARG00000016713	ENSCARG00000016716	olfcq1 (ENSCARG00000016720)	olfcu1 (ENSCARG00000016737)	ENSCARG00000016764
Cyprininae_a	ANCESTRAL SPECIES	374									ENSGT00940000165173	ENSGT00940000155368.e #15	ENSGT00390000000970.f #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591.s #19	ENSGT00940000154019.a.c #21	ENSGT00390000004493.f #22	ENSGT00940000157185.a.b #23	ENSGT00940000162782.s.a.a.a.a.a.a.a.b.a	ENSGT00940000162782.s.a.a.a.a.a.a.a.a.b	ENSGT00940000162782.s.a.a.a.a.b	ENSGT00940000162782.s.a.a.b	ENSGT00940000162782.s.a.b	ENSGT00940000162782.s.a.a.a.b.b	ENSGT00940000162782.s.a.a.a.b.a.b	ENSGT00940000162782.s.a.a.a.a.a.a.b	ENSGT00940000162782.s.a.a.a.b.a.a	ENSGT00940000162782.s.b.a.a	ENSGT00940000162782.s.b.a.b	ENSGT00940000162782.s.b.b	ENSGT00940000166814	ENSGT00940000163991.lb.b.b
Common carp reference	MODERN SPECIES	19	snrpa (ENSCCRG00000011793)	ENSCCRG00000060665	ENSCCRG00000073773	ENSCCRG00000080896	tbrg1 (ENSCCRG00000028561)	ENSCCRG00000080868	ENSCCRG00000059335	ENSCCRG00000074782	ENSCCRG00000071483	tiparp (ENSCCRG00000016895) #15	ssr3 (ENSCCRG00000016834) #16	KCNAB1 (ENSCCRG00000060609) #17	ENSCCRG00000036724	gmps (ENSCCRG00000071571) #19	slc33a1 (ENSCCRG00000011315) #21	c18h3orf33 (ENSCCRG00000072700) #22	PLCH1 (ENSCCRG00000008589) #23	ENSCCRG00000074824	ENSCCRG00000053065	ENSCCRG00000061151	ENSCCRG00000054512	ENSCCRG00000053884	ENSCCRG00000063077	ENSCCRG00000059441	ENSCCRG00000051228	ENSCCRG00000078131	ENSCCRG00000054525	ENSCCRG00000075765	ENSCCRG00000069560	ENSCCRG00000080435	olfcu1 (ENSCCRG00000015673)
Golden-line barbel	MODERN SPECIES	1083										tiparp (ENSSGRG00000026906) #15	ssr3 (ENSSGRG00000026888) #16	kcnab1a (ENSSGRG00000026844) #17	ENSSGRG00000026653	gmps (ENSSGRG00000026086) #19	slc33a1 (ENSSGRG00000026077) #21	c18h3orf33 (ENSSGRG00000026074) #22
Zebrafish	MODERN SPECIES	9	itpkcb (ENSDARG00000067741)	ACTMAP (ENSDARG00000039513)	snrpa (ENSDARG00000018890)	ENSDARG00000068104	tbrg1 (ENSDARG00000074996)	cfap45 (ENSDARG00000068103)	ENSDARG00000096365	ENSDARG00000114191	ENSDARG00000100141	tiparp (ENSDARG00000061841) #15	ssr3 (ENSDARG00000014165) #16	kcnab1a (ENSDARG00000008140) #17	ENSDARG00000005942	gmps (ENSDARG00000079848) #19	slc33a1 (ENSDARG00000020085) #21	C18H3orf33 (ENSDARG00000040582) #22	PLCH1 (ENSDARG00000079253) #23	ENSDARG00000053036	ENSDARG00000091790	olfcq19 (ENSDARG00000068566)	NAMPT (ENSDARG00000076694)	ENSDARG00000078738	ENSDARG00000095263	ENSDARG00000093764	ENSDARG00000055920	ENSDARG00000035214	ENSDARG00000056014	ENSDARG00000115763	ENSDARG00000068549	ENSDARG00000029635	ENSDARG00000056006
Euteleosteomorpha	ANCESTRAL SPECIES	66	ENSGT00940000164637	ENSGT00940000163939	ENSGT00390000018660.l	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT01030000235461	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000156760.f #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b	ENSGT01050000244874.a.a.a.b.a.a.b
Acanthomorphata	ANCESTRAL SPECIES	8	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.b	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	8	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.b	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b
Percomorphaceae	ANCESTRAL SPECIES	8	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j	ENSGT00940000162782.g.b	ENSGT00940000163991	ENSGT00940000162782.g.a.b.a	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.b	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b	ENSGT01050000244874.a.a.a.a
Tiger tail seahorse	MODERN SPECIES	232	acad8 (ENSHCOG00000002276)	ENSHCOG00000002285	zgc:77784 (ENSHCOG00000002300)	lim2.3 (ENSHCOG00000002311)	ENSHCOG00000002326	ENSHCOG00000002339	ENSHCOG00000002372	picalmb (ENSHCOG00000002408)	ZPLD1 (ENSHCOG00000002420)	alcamb (ENSHCOG00000002436)	dyrk1ab (ENSHCOG00000002462)	thap12b (ENSHCOG00000002469)	ENSHCOG00000002478	zgc:112083 (ENSHCOG00000002493)	med13b (ENSHCOG00000002558)	c18h3orf33 (ENSHCOG00000002587) #22	PLCH1 (ENSHCOG00000002619) #23	ENSHCOG00000002633	olfcq3 (ENSHCOG00000002644)	ENSHCOG00000002650	ENSHCOG00000002777	ENSHCOG00000003433	ENSHCOG00000003525	MME (ENSHCOG00000003594) #25	GPR149 (ENSHCOG00000003626) #26	dhx36 (ENSHCOG00000003686) #27	ARHGEF26 (ENSHCOG00000003787) #28	RAP2B (ENSHCOG00000003830) #29	ENSHCOG00000003844	P2RY1 (ENSHCOG00000003853) #30	MBNL1 (ENSHCOG00000003903) #31
Percomorphaceae_B	ANCESTRAL SPECIES	13	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b
Ovalentaria	ANCESTRAL SPECIES	8	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a
Ovalentaria_B	ANCESTRAL SPECIES	11	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a
Pomacentridae	ANCESTRAL SPECIES	5	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d
Pomacentridae_A	ANCESTRAL SPECIES	4	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d
Amphiprion	ANCESTRAL SPECIES	36	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b.z	ENSGT00940000162782.g.b.y	ENSGT00940000162782.g.a.b.b.x	ENSGT00940000162782.g.a.b.b.w.a	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b.y	ENSGT01050000244874.b.z
Orange clownfish	MODERN SPECIES	23	ENSAPEG00000007205	ROBO3 (ENSAPEG00000007164)	lim2.3 (ENSAPEG00000007150)	hspa8b (ENSAPEG00000007104)	ENSAPEG00000007055	ENSAPEG00000007021	picalmb (ENSAPEG00000006786)	ZPLD1 (ENSAPEG00000006703)	ENSAPEG00000006671	alcamb (ENSAPEG00000006052)	dyrk1ab (ENSAPEG00000005935)	thap12b (ENSAPEG00000005902)	ENSAPEG00000005894	zgc:112083 (ENSAPEG00000005850)	med13b (ENSAPEG00000005695)	c18h3orf33 (ENSAPEG00000005605) #22	ENSAPEG00000005580 #23	ENSAPEG00000005571	ENSAPEG00000005527	ENSAPEG00000005435	ENSAPEG00000005381	ENSAPEG00000005341	ENSAPEG00000005150	ENSAPEG00000005051	ENSAPEG00000005012	ENSAPEG00000004774	ENSAPEG00000004638	olfcu1 (ENSAPEG00000004584)	ENSAPEG00000004171	ENSAPEG00000003602	ENSAPEG00000003144
Clown anemonefish	MODERN SPECIES	2583															med13b (ENSAOCG00000010710)	c18h3orf33 (ENSAOCG00000010755) #22	PLCH1 (ENSAOCG00000002102) #23	ENSAOCG00000010926	ENSAOCG00000010962	ENSAOCG00000010985
Spiny chromis	MODERN SPECIES	1035									ZPLD1 (ENSAPOG00000013767)	alcamb (ENSAPOG00000013795)	dyrk1ab (ENSAPOG00000013865)	thap12b (ENSAPOG00000013874)	ENSAPOG00000013903	zgc:112083 (ENSAPOG00000013922)	med13b (ENSAPOG00000014074)	c18h3orf33 (ENSAPOG00000014094) #22
Bicolor damselfish	MODERN SPECIES	981							picalmb (ENSSPAG00000004724)	ZPLD1 (ENSSPAG00000004679)	ENSSPAG00000004658	alcamb (ENSSPAG00000004637)	dyrk1ab (ENSSPAG00000004605)	thap12b (ENSSPAG00000004579)	ENSSPAG00000004566	zgc:112083 (ENSSPAG00000004531)	med13b (ENSSPAG00000004486)	c18h3orf33 (ENSSPAG00000004457) #22	ENSSPAG00000004412 #23	ENSSPAG00000004330	ENSSPAG00000004164	ENSSPAG00000004140
Cichlidae	ANCESTRAL SPECIES	21	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.q.a.a.b	ENSGT00940000163991.r	ENSGT00940000166814.k.b.b	ENSGT00940000163991.q.a.a.a	ENSGT00940000166814.k.a	ENSGT00940000166814.l
Pseudocrenilabrinae	ANCESTRAL SPECIES	19	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b.`b.a.b.a.b.a.a.b.a	ENSGT00940000162782.g.b.`b.a.b.a.a.b	ENSGT00940000162782.g.b.`b.a.a.a.b	ENSGT00940000162782.g.b.`b.a.a.b.b.b	ENSGT00940000162782.g.b.`b.a.a.a.a.a.b	ENSGT00940000162782.g.b.`b.a.a.a.a.a.a	ENSGT00940000162782.g.b.`b.a.a.b.b.a	ENSGT00940000162782.g.b.`b.a.a.b.a	ENSGT00940000162782.g.b.`b.b	ENSGT00940000162782.g.a.b.b
Nile tilapia	MODERN SPECIES	5	acad8 (ENSONIG00000011133)	ENSONIG00000011137	ENSONIG00000011140	lim2.3 (ENSONIG00000011143)	hspa8b (ENSONIG00000011144)	ENSONIG00000011147	ENSONIG00000011149	picalmb (ENSONIG00000011152)	ZPLD1 (ENSONIG00000011156)	alcamb (ENSONIG00000011158)	dyrk1ab (ENSONIG00000011165)	thap12b (ENSONIG00000011168)	ENSONIG00000011169	zgc:112083 (ENSONIG00000029489)	med13b (ENSONIG00000011173)	c18h3orf33 (ENSONIG00000011179) #22	PLCH1 (ENSONIG00000011181) #23	ENSONIG00000011186	ENSONIG00000040171	ENSONIG00000011187	ENSONIG00000031182	ENSONIG00000029788	ENSONIG00000039685	ENSONIG00000039756	ENSONIG00000038058	ENSONIG00000031272	ENSONIG00000040464	ENSONIG00000038313	ENSONIG00000043201	ENSONIG00000040684	ENSONIG00000041658
Midas cichlid	MODERN SPECIES	1363	acad8 (ENSACIG00000007273)	ENSACIG00000007309	ENSACIG00000007369	lim2.3 (ENSACIG00000007397)	hspa8b (ENSACIG00000007410)	ENSACIG00000007436	ENSACIG00000007463	picalmb (ENSACIG00000007509)	ZPLD1 (ENSACIG00000007645)	alcamb (ENSACIG00000007668)	dyrk1ab (ENSACIG00000007706)	thap12b (ENSACIG00000007744)	ENSACIG00000007812	zgc:112083 (ENSACIG00000007823)	med13b (ENSACIG00000007856)	c18h3orf33 (ENSACIG00000007920) #22	PLCH1 (ENSACIG00000008031) #23	ENSACIG00000008084
Atherinomorphae	ANCESTRAL SPECIES	15	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.c.a
Oryzias	ANCESTRAL SPECIES	8	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.s	ENSGT00940000163991.t	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b.o	ENSGT01050000244874.a.a.b.p	ENSGT01050000244874.a.a.a.b.a.a.b
Oryzias_b	ANCESTRAL SPECIES	14	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.a.a	ENSGT00940000162782.g.a.b.a.a.a.b	ENSGT00940000163991.s.a.a	ENSGT00940000163991.s.a.b	ENSGT00940000163991.t.b	ENSGT00940000163991.t.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d.i	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d.j
Javanese ricefish	MODERN SPECIES	4	acad8 (ENSOJAG00000012612)	ENSOJAG00000012566	ENSOJAG00000012300	lim2.3 (ENSOJAG00000012251)	hspa8b (ENSOJAG00000012185)	ENSOJAG00000012132	ENSOJAG00000012112	picalmb (ENSOJAG00000011701)	ZPLD1 (ENSOJAG00000011642)	alcamb (ENSOJAG00000011538)	dyrk1ab (ENSOJAG00000011298)	thap12b (ENSOJAG00000011274)	ENSOJAG00000011267	zgc:112083 (ENSOJAG00000011199)	med13b (ENSOJAG00000009294)	c18h3orf33 (ENSOJAG00000009211) #22	PLCH1 (ENSOJAG00000008705) #23	ENSOJAG00000008548	ENSOJAG00000007418	ENSOJAG00000007011	ENSOJAG00000006939	ENSOJAG00000006915	ENSOJAG00000006872	ENSOJAG00000006594	ENSOJAG00000006496	ENSOJAG00000006425	ENSOJAG00000006075	ENSOJAG00000005945	ENSOJAG00000014219	ENSOJAG00000014115	ENSOJAG00000013979
Indian medaka	MODERN SPECIES	12	acad8 (ENSOMEG00000005767)	ENSOMEG00000005813	ENSOMEG00000005863	lim2.3 (ENSOMEG00000005883)	hspa8b (ENSOMEG00000005909)	ENSOMEG00000005949	ENSOMEG00000005977	picalmb (ENSOMEG00000006282)	ZPLD1 (ENSOMEG00000006407)	alcamb (ENSOMEG00000006443)	dyrk1ab (ENSOMEG00000006496)	thap12b (ENSOMEG00000006524)	ENSOMEG00000006536	zgc:112083 (ENSOMEG00000006575)	med13b (ENSOMEG00000006619)	c18h3orf33 (ENSOMEG00000006642) #22	PLCH1 (ENSOMEG00000006810) #23	ENSOMEG00000006876	ENSOMEG00000006983	ENSOMEG00000007102	ENSOMEG00000000169	ENSOMEG00000007216	ENSOMEG00000007235	ENSOMEG00000007321	ENSOMEG00000007376	ENSOMEG00000007383	ENSOMEG00000007550	ENSOMEG00000007739	ENSOMEG00000007896	olfcu1 (ENSOMEG00000007947)	ENSOMEG00000007966
Oryzias_a	ANCESTRAL SPECIES	8	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.t	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b.o	ENSGT01050000244874.a.a.b.p	ENSGT01050000244874.a.a.a.b.a.a.b	ENSGT01100000263565.b.a.b.a
Japanese Medaka HdrR	MODERN SPECIES	4	ENSORLG00000005242	ENSORLG00000005288	lim2.3 (ENSORLG00000005308)	hspa8b (ENSORLG00000005316)	ENSORLG00000005324	ENSORLG00000005336	picalmb (ENSORLG00000005354)	ENSORLG00000028637	ENSORLG00000005366	alcamb (ENSORLG00000005387)	dyrk1ab (ENSORLG00000005417)	thap12b (ENSORLG00000005427)	ENSORLG00000005434	zgc:112083 (ENSORLG00000005444)	med13b (ENSORLG00000005489)	c18h3orf33 (ENSORLG00000026796) #22	PLCH1 (ENSORLG00000005538) #23	ENSORLG00000005551	ENSORLG00000005562	ENSORLG00000005577	ENSORLG00000000902	ENSORLG00000005587	ENSORLG00000005596	ENSORLG00000022128	ENSORLG00000024926	ENSORLG00000005602	ENSORLG00000022535	ENSORLG00000028177	ENSORLG00000005616	olfcu1 (ENSORLG00000005648)	ENSORLG00000029371
Chinese medaka	MODERN SPECIES	211	acad8 (ENSOSIG00000000380)	ENSOSIG00000000508	ENSOSIG00000000524	lim2.3 (ENSOSIG00000004482)	hspa8b (ENSOSIG00000004501)	ENSOSIG00000004644	ENSOSIG00000004647	picalmb (ENSOSIG00000004762)	ZPLD1 (ENSOSIG00000012263)	alcamb (ENSOSIG00000012269)	dyrk1ab (ENSOSIG00000012276)	thap12b (ENSOSIG00000012387)	ENSOSIG00000012390	zgc:112083 (ENSOSIG00000012395)	med13b (ENSOSIG00000012442)	c18h3orf33 (ENSOSIG00000014328) #22	PLCH1 (ENSOSIG00000014333) #23	ENSOSIG00000015346	olfcq3 (ENSOSIG00000015350)
Cyprinodontiformes	ANCESTRAL SPECIES	12	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d.h	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d.g.a
Cyprinodontoidei	ANCESTRAL SPECIES	9	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.y.b.a	ENSGT00940000163991.y.a.a.b	ENSGT00940000163991.y.a.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b.db	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.a
Poeciliinae	ANCESTRAL SPECIES	14	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b.u	ENSGT00940000162782.g.b.v	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.y.a.a.a.c.a.a.a.b	ENSGT00940000163991.y.a.b	ENSGT00940000163991.y.a.a.b	ENSGT00940000163991.y.a.a.a.c.a.b.b	ENSGT00940000163991.y.a.a.a.c.a.b.a.b	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b
Poecilia	ANCESTRAL SPECIES	2	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b.u	ENSGT00940000162782.g.b.v	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.y.a.a.a.c.a.a.a.b	ENSGT00940000163991.y.a.b	ENSGT00940000163991.y.a.a.b	ENSGT00940000163991.y.a.a.a.c.a.b.b	ENSGT00940000163991.y.a.a.a.c.a.b.a.b	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b
NAME_6	ANCESTRAL SPECIES	94	ENSGT00940000157231.a.b	ENSGT00940000159616	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b.u	ENSGT00940000162782.g.b.v.a	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.y.a.a.a.c.a.a.a.b	ENSGT00940000163991.y.a.b	ENSGT00940000163991.y.a.a.b	ENSGT00940000163991.y.a.a.a.c.a.b.b
Sailfin molly	MODERN SPECIES	275		ENSPLAG00000016199	ENSPLAG00000016193	lim2.3 (ENSPLAG00000016175)	hspa8b (ENSPLAG00000016162)	ENSPLAG00000016142	ENSPLAG00000016117	picalmb (ENSPLAG00000016090)	ZPLD1 (ENSPLAG00000015965)	alcamb (ENSPLAG00000015937)	dyrk1ab (ENSPLAG00000015877)	thap12b (ENSPLAG00000015826)	ENSPLAG00000015822	zgc:112083 (ENSPLAG00000000360)	med13b (ENSPLAG00000015780)	c18h3orf33 (ENSPLAG00000015671) #22
Amazon molly	MODERN SPECIES	314	ENSPFOG00000007537	ENSPFOG00000007666	ENSPFOG00000007790	lim2.3 (ENSPFOG00000008222)	hspa8b (ENSPFOG00000008230)	ENSPFOG00000008442	ENSPFOG00000008517	picalmb (ENSPFOG00000008623)	ZPLD1 (ENSPFOG00000008964)	alcamb (ENSPFOG00000009060)	dyrk1ab (ENSPFOG00000009262)	thap12b (ENSPFOG00000009414)	ENSPFOG00000009487	zgc:112083 (ENSPFOG00000009515)	med13b (ENSPFOG00000009647)	c18h3orf33 (ENSPFOG00000009882) #22	PLCH1 (ENSPFOG00000009930) #23	ENSPFOG00000010265	ENSPFOG00000022980	ENSPFOG00000010528	ENSPFOG00000010702	ENSPFOG00000010757	ENSPFOG00000011111	ENSPFOG00000011184	ENSPFOG00000011346	ENSPFOG00000011358	ENSPFOG00000011551
Guppy	MODERN SPECIES	443	ENSPREG00000011275	ENSPREG00000011322	ENSPREG00000011400	lim2.3 (ENSPREG00000011412)	hspa8b (ENSPREG00000011434)	ENSPREG00000011457	ENSPREG00000011488	picalmb (ENSPREG00000011554)	ZPLD1 (ENSPREG00000011606)	alcamb (ENSPREG00000011648)	dyrk1ab (ENSPREG00000011700)	thap12b (ENSPREG00000011766)	ENSPREG00000011782	zgc:112083 (ENSPREG00000011788)	med13b (ENSPREG00000011827)	c18h3orf33 (ENSPREG00000011934) #22	ENSPREG00000011999 #23	ENSPREG00000012124	ENSPREG00000012141	ENSPREG00000012164	ENSPREG00000012207	ENSPREG00000012292	ENSPREG00000012317	ENSPREG00000012349	olfcu1 (ENSPREG00000012375)	ENSPREG00000012400	ENSPREG00000012455	ENSPREG00000012773	ENSPREG00000013097	ENSPREG00000013137	ENSPREG00000013153
Platyfish	MODERN SPECIES	9	ENSXMAG00000018057	rpgrb (ENSXMAG00000018068)	ENSXMAG00000001732	lim2.3 (ENSXMAG00000001731)	hsc70 (ENSXMAG00000001728)	ENSXMAG00000001727	ENSXMAG00000001725	picalmb (ENSXMAG00000026682)	ZPLD1 (ENSXMAG00000001718)	alcamb (ENSXMAG00000001715)	dyrk1ab (ENSXMAG00000001707)	thap12b (ENSXMAG00000022143)	ENSXMAG00000001705	zgc:112083 (ENSXMAG00000001698)	med13b (ENSXMAG00000001692)	c18h3orf33 (ENSXMAG00000018017) #22	PLCH1 (ENSXMAG00000001650) #23	ENSXMAG00000001647	ENSXMAG00000021836	ENSXMAG00000022372	ENSXMAG00000029791	ENSXMAG00000026197	ENSXMAG00000029746	ENSXMAG00000028705	ENSXMAG00000001645	ENSXMAG00000027620	ENSXMAG00000027228	ENSXMAG00000029957	ENSXMAG00000022150	ENSXMAG00000021106	ENSXMAG00000025953
NAME_4	ANCESTRAL SPECIES	40	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b.w	ENSGT00940000163991.y.a.b	ENSGT00940000163991.y.a.a.b.b	ENSGT00940000163991.y.a.a.a.a	ENSGT00940000163991.y.b.b	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b.db	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d.h	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d.g.a.a.b.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d.g.b.b.e.b
Mummichog	MODERN SPECIES	2484	ENSFHEG00000005093	lim2.3 (ENSFHEG00000005120)	hspa8b (ENSFHEG00000005182)	ENSFHEG00000005198	ENSFHEG00000005241	picalmb (ENSFHEG00000005380)	ZPLD1 (ENSFHEG00000005421)	alcamb (ENSFHEG00000005437)	dyrk1ab (ENSFHEG00000005499)	thap12b (ENSFHEG00000005514)	ENSFHEG00000005524	zgc:112083 (ENSFHEG00000000143)	ENSFHEG00000005571	ENSFHEG00000005601	ENSFHEG00000005618	c18h3orf33 (ENSFHEG00000005632) #22	ENSFHEG00000005698 #23	ENSFHEG00000005737
Sheepshead minnow	MODERN SPECIES	116		ENSCVAG00000008022	ENSCVAG00000008005	lim2.3 (ENSCVAG00000000887)	hspa8b (ENSCVAG00000007956)	ENSCVAG00000007909	ENSCVAG00000007893	picalmb (ENSCVAG00000007868)	ZPLD1 (ENSCVAG00000007569)	alcamb (ENSCVAG00000007545)	dyrk1ab (ENSCVAG00000007522)	thap12b (ENSCVAG00000007465)	ENSCVAG00000007442	zgc:112083 (ENSCVAG00000007430)	med13b (ENSCVAG00000007371)	c18h3orf33 (ENSCVAG00000000698) #22	ENSCVAG00000007108 #23	ENSCVAG00000007001	ENSCVAG00000006990	ENSCVAG00000006968	ENSCVAG00000006943	ENSCVAG00000006930	ENSCVAG00000006867	ENSCVAG00000006857	ENSCVAG00000006829	ENSCVAG00000006818	ENSCVAG00000006797	ENSCVAG00000006770	ENSCVAG00000006746	olfcu1 (ENSCVAG00000006739)	ENSCVAG00000006710
Aplocheiloidei	ANCESTRAL SPECIES	8	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT01100000263565.b.b	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d.g.b.a.b
Turquoise killifish	MODERN SPECIES	1615	ENSNFUG00015003012	ENSNFUG00015003003	ENSNFUG00015002997	ENSNFUG00015002987	PICALML (ENSNFUG00015002848)	ZPLD1 (ENSNFUG00015002777)	alcamb (ENSNFUG00015002765)	DYRK1AB (ENSNFUG00015002735)	PRKRIRB (ENSNFUG00015002714)	ENSNFUG00015002708	ENSNFUG00015002704	Nfu_g_1_000615 (ENSNFUG00015002696)	ENSNFUG00015002688	med13b (ENSNFUG00015002435)	ENSNFUG00015002365	c18h3orf33 (ENSNFUG00015002358) #22	PLCH1 (ENSNFUG00015002137) #23	ENSNFUG00015002041	ENSNFUG00015002016	ENSNFUG00015001963	ENSNFUG00015001948	ENSNFUG00015001927	ENSNFUG00015001867	ENSNFUG00015001841	ENSNFUG00015001813	ENSNFUG00015001709	ENSNFUG00015001678	ENSNFUG00015001672	ENSNFUG00015001663	ENSNFUG00015001650	ENSNFUG00015001631
Mangrove rivulus	MODERN SPECIES	343							ENSKMAG00000020072	picalmb (ENSKMAG00000020051)	ZPLD1 (ENSKMAG00000020004)	alcamb (ENSKMAG00000019971)	dyrk1ab (ENSKMAG00000019933)	thap12b (ENSKMAG00000019909)	ENSKMAG00000019895	zgc:112083 (ENSKMAG00000019874)	med13b (ENSKMAG00000019762)	c18h3orf33 (ENSKMAG00000019720) #22	PLCH1 (ENSKMAG00000019663) #23	ENSKMAG00000019620
Percomorphaceae_C	ANCESTRAL SPECIES	9	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b
Eupercaria	ANCESTRAL SPECIES	7	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.v	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b
Tetraodontidae	ANCESTRAL SPECIES	10	ENSGT00390000013297	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000162782.g.a.b.b.i	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.u.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.b	ENSGT01050000244874.a.a.a.b.a.a.b	ENSGT01100000263565.b.a.b.a
Fugu	MODERN SPECIES	2	JAM3 (ENSTRUG00000002858)	vps26b (ENSTRUG00000006004)	thyn1 (ENSTRUG00000027328)	ENSTRUG00000022225	ENSTRUG00000026045	lim2.3 (ENSTRUG00000025476)	ENSTRUG00000027762	ENSTRUG00000020315	picalmb (ENSTRUG00000005633)	alcamb (ENSTRUG00000006355)	dyrk1ab (ENSTRUG00000006869)	thap12b (ENSTRUG00000007070)	ENSTRUG00000007180	zgc:112083 (ENSTRUG00000007198)	med13b (ENSTRUG00000007405)	c18h3orf33 (ENSTRUG00000022793) #22	PLCH1 (ENSTRUG00000007875) #23	ENSTRUG00000014270	ENSTRUG00000028273	ENSTRUG00000004327	ENSTRUG00000029904	ENSTRUG00000029804	ENSTRUG00000030596	ENSTRUG00000019797	ENSTRUG00000030789	olfcu1 (ENSTRUG00000007182)	ENSTRUG00000026774	ENSTRUG00000023621	ENSTRUG00000020528	ENSTRUG00000032466	ENSTRUG00000031142
Eupecaria_A	ANCESTRAL SPECIES	9	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.v	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b
Ballan wrasse	MODERN SPECIES	12	ENSLBEG00000023254	ROBO3 (ENSLBEG00000023305)	lim2.3 (ENSLBEG00000023363)	hspa8b (ENSLBEG00000023383)	ENSLBEG00000023419	ENSLBEG00000023521	picalmb (ENSLBEG00000023640)	ZPLD1 (ENSLBEG00000023974)	ENSLBEG00000024000	alcamb (ENSLBEG00000024042)	dyrk1ab (ENSLBEG00000024100)	thap12b (ENSLBEG00000024136)	ENSLBEG00000024156	zgc:112083 (ENSLBEG00000024184)	med13b (ENSLBEG00000024246)	c18h3orf33 (ENSLBEG00000024303) #22	PLCH1 (ENSLBEG00000024359) #23	ENSLBEG00000024472	ENSLBEG00000024518
Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.v	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b
Perciformes	ANCESTRAL SPECIES	10	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.v	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.b
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.v	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a
Channel bull blenny	MODERN SPECIES	4	ENSCGOG00000019673	ENSCGOG00000019079	lim2.3 (ENSCGOG00000019056)	hspa8b (ENSCGOG00000012061)	ENSCGOG00000011877	ENSCGOG00000011863	ENSCGOG00000011855	picalmb (ENSCGOG00000006747)	ZPLD1 (ENSCGOG00000006602)	alcamb (ENSCGOG00000006583)	dyrk1ab (ENSCGOG00000006301)	thap12b (ENSCGOG00000006293)	ENSCGOG00000006292	zgc:112083 (ENSCGOG00000006289)	med13b (ENSCGOG00000003930)	c18h3orf33 (ENSCGOG00000003835) #22	PLCH1 (ENSCGOG00000003711) #23	ENSCGOG00000003660	ENSCGOG00000003637	ENSCGOG00000003525	ENSCGOG00000003405	ENSCGOG00000003280	olfcu1 (ENSCGOG00000003251)	ENSCGOG00000003201	ENSCGOG00000002870	ENSCGOG00000002688	ENSCGOG00000002537	ENSCGOG00000002397	olfcg6 (ENSCGOG00000002316)	ENSCGOG00000002282	MME (ENSCGOG00000002184) #25
Pike perch	MODERN SPECIES	130	acad8 (ENSSLUG00000020660)	ENSSLUG00000020677	ROBO3 (ENSSLUG00000020692)	lim2.3 (ENSSLUG00000020739)	hspa8b (ENSSLUG00000020839)	ENSSLUG00000023335	ENSSLUG00000023348	picalmb (ENSSLUG00000023384)	ZPLD1 (ENSSLUG00000023582)	alcamb (ENSSLUG00000023602)	dyrk1ab (ENSSLUG00000023674)	thap12b (ENSSLUG00000023696)	ENSSLUG00000023698	zgc:112083 (ENSSLUG00000023702)	med13b (ENSSLUG00000023748)	c18h3orf33 (ENSSLUG00000023969) #22	PLCH1 (ENSSLUG00000023973) #23	ENSSLUG00000023981	ENSSLUG00000023989	ENSSLUG00000023999	ENSSLUG00000024011	ENSSLUG00000024043	ENSSLUG00000024075	ENSSLUG00000024116	ENSSLUG00000024145	ENSSLUG00000024150	ENSSLUG00000024168	ENSSLUG00000002867	ENSSLUG00000002881	ENSSLUG00000002890
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.v	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.b	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d	ENSGT01050000244874.a.a.a.b.a.a.b
Lumpfish	MODERN SPECIES	4	ENSCLMG00005005550	lim2.3 (ENSCLMG00005005547)	hspa8b (ENSCLMG00005003689)	ENSCLMG00005003670	ENSCLMG00005003666	picalmb (ENSCLMG00005003650)	ZPLD1 (ENSCLMG00005003637)	ENSCLMG00005003635	alcamb (ENSCLMG00005003631)	dyrk1ab (ENSCLMG00005003472)	ENSCLMG00005003471	ENSCLMG00005003469	ENSCLMG00005003467	zgc:112083 (ENSCLMG00005003466)	med13b (ENSCLMG00005003188)	c18h3orf33 (ENSCLMG00005003165) #22	PLCH1 (ENSCLMG00005003153) #23	ENSCLMG00005003144	ENSCLMG00005003139	ENSCLMG00005003135	ENSCLMG00005002764	ENSCLMG00005002543	ENSCLMG00005002538	ENSCLMG00005002535	ENSCLMG00005002516	ENSCLMG00005002513	olfcu1 (ENSCLMG00005002510)	olfcu1 (ENSCLMG00005002503)	ENSCLMG00005002499	ENSCLMG00005002495	ENSCLMG00005002474
Stickleback	MODERN SPECIES		ENSGACG00000010573	ROBO3 (ENSGACG00000010555)	lim2.3 (ENSGACG00000010543)	hspa8b (ENSGACG00000010517)	ENSGACG00000010514	ENSGACG00000010497	picalmb (ENSGACG00000010488)	ZPLD1 (ENSGACG00000010482)	alcamb (ENSGACG00000010444)	dyrk1ab (ENSGACG00000010440)	thap12b (ENSGACG00000010435)	ENSGACG00000010429	zgc:112083 (ENSGACG00000010410)	ENSGACG00000010406	med13b (ENSGACG00000010389)	c18h3orf33 (ENSGACG00000010386) #22	PLCH1 (ENSGACG00000010371) #23	ENSGACG00000010364	ENSGACG00000010349	ENSGACG00000010344	ENSGACG00000010342	ENSGACG00000010337	ENSGACG00000010329	ENSGACG00000010326	ENSGACG00000010323	ENSGACG00000010322	olfch1 (ENSGACG00000010316)	olfcj1 (ENSGACG00000010313)	ENSGACG00000010309	MME (ENSGACG00000010305) #25	GPR149 (ENSGACG00000010302) #26
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.h.b	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991.g	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.u.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01100000263565.b.a.b.b.b.v
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000163991.h.b	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991.g	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b.u.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01100000263565.b.a.b.b.b.v	ENSGT01100000263565.b.a.b.b.a.b
Large yellow croaker	MODERN SPECIES	479	ENSLCRG00005004595	BLTP2 (ENSLCRG00005004588)	RSKR (ENSLCRG00005004581)	aldoca (ENSLCRG00005004174)	srsf1a (ENSLCRG00005004172)	ENSLCRG00005004170	dynll2a (ENSLCRG00005004169)	hnf1ba (ENSLCRG00005004164)	SYNRG (ENSLCRG00005003479)	dusp14 (ENSLCRG00005003466)	tada2a (ENSLCRG00005002474)	nek8 (ENSLCRG00005002258)	tlcd1 (ENSLCRG00005002242)	zgc:112083 (ENSLCRG00005002238)	med13b (ENSLCRG00005002155)	c18h3orf33 (ENSLCRG00005002144) #22	PLCH1 (ENSLCRG00005000358) #23	ENSLCRG00005000175	ENSLCRG00005000163	ENSLCRG00005000147	ENSLCRG00005000127	ENSLCRG00005010867	ENSLCRG00005010864	ENSLCRG00005010862	ENSLCRG00005010861	ENSLCRG00005010809	ENSLCRG00005010573	ENSLCRG00005010567	ENSLCRG00005010565	ENSLCRG00005010564	ENSLCRG00005010563
European seabass	MODERN SPECIES	3	lim2.3 (ENSDLAG00005032552)	hspa8b (ENSDLAG00005016006)	ENSDLAG00005015987	ENSDLAG00005015977	ENSDLAG00005015929	picalmb (ENSDLAG00005009388)	ENSDLAG00005009258	alcamb (ENSDLAG00005009037)	dyrk1ab (ENSDLAG00005008930)	thap12b (ENSDLAG00005030024)	thap12b (ENSDLAG00005028511)	zgc:112083 (ENSDLAG00005008894)	med13b (ENSDLAG00005029681)	med13b (ENSDLAG00005028154)	ENSDLAG00005028860	c18h3orf33 (ENSDLAG00005031058) #22	PLCH1 (ENSDLAG00005005058) #23	ENSDLAG00005004903	ENSDLAG00005031984	ENSDLAG00005004658	ENSDLAG00005033661	ENSDLAG00005031482	ENSDLAG00005004343	ENSDLAG00005015850	ENSDLAG00005015996	ENSDLAG00005027117	ENSDLAG00005033213	ENSDLAG00005026345	ENSDLAG00005033828	ENSDLAG00005030292	ENSDLAG00005032972
Gilthead seabream	MODERN SPECIES	11	ENSSAUG00010017166	lim2.3 (ENSSAUG00010019135)	hspa8b (ENSSAUG00010019139)	ENSSAUG00010019300	ENSSAUG00010019304	ENSSAUG00010019308	picalmb (ENSSAUG00010019361)	ZPLD1 (ENSSAUG00010023569)	ENSSAUG00010023570	alcamb (ENSSAUG00010023579)	dyrk1ab (ENSSAUG00010023595)	thap12b (ENSSAUG00010023602)	ENSSAUG00010023603	zgc:112083 (ENSSAUG00010023605)	med13b (ENSSAUG00010023635)	c18h3orf33 (ENSSAUG00010024280) #22	PLCH1 (ENSSAUG00010024282) #23	ENSSAUG00010024378	ENSSAUG00010024380	ENSSAUG00010024381	ENSSAUG00010024382	ENSSAUG00010024383	ENSSAUG00010024387	ENSSAUG00010003842	ENSSAUG00010003854	ENSSAUG00010003861	ENSSAUG00010003876	ENSSAUG00010003881	ENSSAUG00010003892	ENSSAUG00010003902	ENSSAUG00010003907
Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.i.b
Zig-zag eel	MODERN SPECIES	4	ENSMAMG00000016895	lim2.3 (ENSMAMG00000016873)	hspa8b (ENSMAMG00000016857)	ENSMAMG00000016800	ENSMAMG00000016764	picalmb (ENSMAMG00000016633)	ENSMAMG00000016618	alcamb (ENSMAMG00000016609)	dyrk1ab (ENSMAMG00000016573)	thap12b (ENSMAMG00000016548)	ENSMAMG00000016539	ENSMAMG00000025676	ENSMAMG00000025039	zgc:112083 (ENSMAMG00000016474)	med13b (ENSMAMG00000016385)	c18h3orf33 (ENSMAMG00000016365) #22	PLCH1 (ENSMAMG00000016301) #23	ENSMAMG00000016202	ENSMAMG00000016146	ENSMAMG00000016063	ENSMAMG00000016031	ENSMAMG00000016018	ENSMAMG00000015995	ENSMAMG00000015973	ENSMAMG00000015834	ENSMAMG00000026422	ENSMAMG00000015680	ENSMAMG00000015601	ENSMAMG00000015585	ENSMAMG00000026246	olfcu1 (ENSMAMG00000015139)
Anabantoidei	ANCESTRAL SPECIES	14	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b.s.a
Siamese fighting fish	MODERN SPECIES	4	ENSBSLG00000017774	ROBO3 (ENSBSLG00000017802)	lim2.3 (ENSBSLG00000018062)	hspa8b (ENSBSLG00000018126)	ENSBSLG00000020196	ENSBSLG00000020199	picalmb (ENSBSLG00000020221)	ZPLD1 (ENSBSLG00000020443)	alcamb (ENSBSLG00000020455)	dyrk1ab (ENSBSLG00000020562)	thap12b (ENSBSLG00000020588)	ENSBSLG00000020589	zgc:112083 (ENSBSLG00000020590)	med13b (ENSBSLG00000020591)	ENSBSLG00000020649	c18h3orf33 (ENSBSLG00000020652) #22	PLCH1 (ENSBSLG00000020672) #23	ENSBSLG00000020725	ENSBSLG00000020728	ENSBSLG00000020733	ENSBSLG00000020735	ENSBSLG00000020738	ENSBSLG00000020747	ENSBSLG00000002376	SUCNR1 (ENSBSLG00000002516) #32	SUCNR1 (ENSBSLG00000002521) #32	SUCNR1 (ENSBSLG00000002534) #32	ENSBSLG00000002555	ENSBSLG00000002667	ENSBSLG00000002689	ENSBSLG00000002764
Carangaria	ANCESTRAL SPECIES	8	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b
Pleuronectoidei	ANCESTRAL SPECIES	13	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000154813.f	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000162782.g.b	ENSGT00940000163991	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b.i.b	ENSGT01050000244874.a.a.a.b.a.b.i.a	ENSGT01050000244874.a.a.a.b.a.a.a.a.b.d	ENSGT01050000244874.a.a.a.a
Turbot	MODERN SPECIES	15	acad8 (ENSSMAG00000008465)	ENSSMAG00000008491	ENSSMAG00000008504	lim2.3 (ENSSMAG00000008530)	hspa8b (ENSSMAG00000008540)	ENSSMAG00000008574	ENSSMAG00000008594	picalmb (ENSSMAG00000008621)	ENSSMAG00000008908	alcamb (ENSSMAG00000008947)	dyrk1ab (ENSSMAG00000008975)	thap12b (ENSSMAG00000009044)	ENSSMAG00000009057	zgc:112083 (ENSSMAG00000009071)	med13b (ENSSMAG00000009131)	c18h3orf33 (ENSSMAG00000009270) #22	PLCH1 (ENSSMAG00000009303) #23	ENSSMAG00000009478	ENSSMAG00000029571	ENSSMAG00000035246	ENSSMAG00000032690	ENSSMAG00000009833	olfcu1 (ENSSMAG00000010562)	ENSSMAG00000010593	ENSSMAG00000010601	ENSSMAG00000010626	ENSSMAG00000011207	ENSSMAG00000011247	ENSSMAG00000011674	ENSSMAG00000011786	olfcw1 (ENSSMAG00000011799)
Tongue sole	MODERN SPECIES	14	cbl (ENSCSEG00000016298)	arrb1 (ENSCSEG00000016268)	ENSCSEG00000016250	ENSCSEG00000016244	ENSCSEG00000016229	ENSCSEG00000016206	ENSCSEG00000016197	OSTN (ENSCSEG00000016192)	ENSCSEG00000016186	rffl (ENSCSEG00000016181)	eif4h (ENSCSEG00000016175)	ANO7 (ENSCSEG00000016160)	ece2b (ENSCSEG00000016150)	MME (ENSCSEG00000016111) #25	med13b (ENSCSEG00000016046)	c18h3orf33 (ENSCSEG00000016021) #22	PLCH1 (ENSCSEG00000016003) #23	ENSCSEG00000015988	zgc:112083 (ENSCSEG00000015982)	ENSCSEG00000015979	thap12b (ENSCSEG00000015973)	dyrk1ab (ENSCSEG00000015961)	alcamb (ENSCSEG00000015944)	ENSCSEG00000015925	zgc:101731 (ENSCSEG00000015904)	ENSCSEG00000015880	dlc (ENSCSEG00000015865)	timm50 (ENSCSEG00000015842)	CLIP3 (ENSCSEG00000015832)	ENSCSEG00000015817	ENSCSEG00000015813
Carangaria_A	ANCESTRAL SPECIES	10	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000164443.b.b	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b.g.a	ENSGT00940000162782.g.a.b.b	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a	ENSGT00940000162782.g.a.b.a.b	ENSGT00940000163991	ENSGT00940000162782.g.a.a	ENSGT00940000166814	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b
Barramundi perch	MODERN SPECIES	309	ROBO3 (ENSLCAG00010024208)	lim2.3 (ENSLCAG00010024181)	hspa8b (ENSLCAG00010023953)	ENSLCAG00010023849	ENSLCAG00010023842	picalmb (ENSLCAG00010023624)	ZPLD1 (ENSLCAG00010023530)	ENSLCAG00010023527	alcamb (ENSLCAG00010023458)	dyrk1ab (ENSLCAG00010023327)	thap12b (ENSLCAG00010023308)	ENSLCAG00010023302	zgc:112083 (ENSLCAG00010023300)	med13b (ENSLCAG00010022778)	ENSLCAG00010022665	c18h3orf33 (ENSLCAG00010022664) #22	ENSLCAG00010022657 #23	ENSLCAG00010022654	ENSLCAG00010022644	ENSLCAG00010022638	ENSLCAG00010022633	ENSLCAG00010022626	ENSLCAG00010022620	ENSLCAG00010022616	ENSLCAG00010022609	ENSLCAG00010022600	ENSLCAG00010022596	ENSLCAG00010022585	ENSLCAG00010022487	ENSLCAG00010022463	ENSLCAG00010022455
Seriola	ANCESTRAL SPECIES	74	ENSGT00940000157590	ENSGT00940000157231.a.b	ENSGT00940000155457.a.b	ENSGT01050000244814.a.a.b.b.b.b.a	ENSGT00950000183206.a.b.a.a.a	ENSGT00940000166822	ENSGT00950000183068.a.b.d	ENSGT00940000156527.d	ENSGT00940000164443.a.a.b	ENSGT00940000156881.g	ENSGT00940000157408.a.b	ENSGT00530000063516.a.a.a.b	ENSGT00530000063947.C.c	ENSGT00870000136508.c.b	ENSGT00390000013680.b.b	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453.i	ENSGT00940000165453.j.b	ENSGT00940000165453.j.a	ENSGT00940000162782.g.b.g.a.c.b.a	ENSGT00940000162782.g.b.g.a.c.b.b	ENSGT00940000162782.g.b.g.a.c.a.a.b	ENSGT00940000162782.g.b.g.a.c.a.b	ENSGT00940000162782.g.b.g.b	ENSGT00940000162782.g.b.g.a.d	ENSGT00940000162782.g.b.g.a.c.a.a.a.a	ENSGT00940000162782.g.a.b.b.f	ENSGT00940000162782.g.a.b.b.e.a	ENSGT00940000162782.g.a.b.a.a.b	ENSGT00940000162782.g.a.b.a.a.a
Greater amberjack	MODERN SPECIES	279	acad8 (ENSSDUG00000004188)	ENSSDUG00000004127	ROBO3 (ENSSDUG00000003540)	lim2.3 (ENSSDUG00000003310)	hspa8b (ENSSDUG00000003205)	ENSSDUG00000003041	picalmb (ENSSDUG00000002430)	ZPLD1 (ENSSDUG00000002218)	ENSSDUG00000002090	alcamb (ENSSDUG00000001971)	dyrk1ab (ENSSDUG00000001827)	thap12b (ENSSDUG00000001753)	ENSSDUG00000001717	zgc:112083 (ENSSDUG00000001614)	med13b (ENSSDUG00000001478)	c18h3orf33 (ENSSDUG00000001372) #22	PLCH1 (ENSSDUG00000001231) #23	ENSSDUG00000001162
Yellowtail amberjack	MODERN SPECIES	3212															med13b (ENSSLDG00000023137)	c18h3orf33 (ENSSLDG00000023116) #22	ENSSLDG00000023091 #23	ENSSLDG00000023052	ENSSLDG00000023003	ENSSLDG00000022963	ENSSLDG00000022905	ENSSLDG00000022789	ENSSLDG00000022758	ENSSLDG00000022743	ENSSLDG00000022693	ENSSLDG00000022682	ENSSLDG00000022662	ENSSLDG00000022526	ENSSLDG00000022485	ENSSLDG00000022458	ENSSLDG00000022369
Pinecone sodierfish	MODERN SPECIES	4	acad8 (ENSMMDG00005006510)	ENSMMDG00005006504	ENSMMDG00005006501	lim2.3 (ENSMMDG00005006496)	hspa8b (ENSMMDG00005006494)	ENSMMDG00005006493	ENSMMDG00005006492	picalmb (ENSMMDG00005006425)	ZPLD1 (ENSMMDG00005006396)	alcamb (ENSMMDG00005005570)	dyrk1ab (ENSMMDG00005005554)	thap12b (ENSMMDG00005005551)	ENSMMDG00005005549	zgc:112083 (ENSMMDG00005005542)	med13b (ENSMMDG00005005355)	c18h3orf33 (ENSMMDG00005005289) #22	ENSMMDG00005005235 #23	ENSMMDG00005005219	ENSMMDG00005005215	ENSMMDG00005005212	ENSMMDG00005005206	ENSMMDG00005005194	ENSMMDG00005005188	ENSMMDG00005005185	ENSMMDG00005005181	ENSMMDG00005005175	ENSMMDG00005005172	ENSMMDG00005005161	ENSMMDG00005005151	ENSMMDG00005005002	ENSMMDG00005005000
Cod	MODERN SPECIES	7	thyn1 (ENSGMOG00000008655)	acad8 (ENSGMOG00000010419)	ENSGMOG00000023941	ENSGMOG00000010366	lim2.3 (ENSGMOG00000010361)	ENSGMOG00000010352	ENSGMOG00000033771	picalmb (ENSGMOG00000010297)	ENSGMOG00000010288	ENSGMOG00000033683	alcamb (ENSGMOG00000010262)	dyrk1ab (ENSGMOG00000010249)	thap12b (ENSGMOG00000010245)	ENSGMOG00000010235	med13b (ENSGMOG00000010188)	c18h3orf33 (ENSGMOG00000030648) #22	ENSGMOG00000027078	ENSGMOG00000010228	PLCH1 (ENSGMOG00000036114) #23	ENSGMOG00000015158	ENSGMOG00000034475	ENSGMOG00000034167	ENSGMOG00000022220	ENSGMOG00000030321	ENSGMOG00000037119	ENSGMOG00000029950	ENSGMOG00000029803	ENSGMOG00000026734	ENSGMOG00000029710	ENSGMOG00000033833	ENSGMOG00000015132
Protacanthopterygii	ANCESTRAL SPECIES	51	ENSGT00940000164637	ENSGT00940000163939	ENSGT00390000018660.k.a	ENSGT00390000018660.k.b	ENSGT01100000263515.a.b.a.a	ENSGT00940000159135	ENSGT01030000235461	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991.cb	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.b	ENSGT01050000244874.a.a.b	ENSGT01100000263565.b.a.b.a	ENSGT01100000263565.b.a.b.b.a.a	ENSGT00940000156745.a #25
Salmoninae	ANCESTRAL SPECIES	44	ENSGT00940000158168.m	ENSGT00390000015980.e	ENSGT00940000164637.y	ENSGT00940000163939.d	ENSGT00390000018660.k.a	ENSGT01100000263515.a.b.a.a.e	ENSGT00940000159135.e.b	ENSGT00940000155368.g.b.b #15	ENSGT00390000000970.g #16	ENSGT00940000156760.e.b.b #17	ENSGT00940000156760.f #17	ENSGT00940000160473	ENSGT00390000006591.q.a #19	ENSGT00940000154019.a.e.a #21	ENSGT00940000154019.a.e.b.a #21	ENSGT00390000004493 #22	ENSGT00940000157185.c.a #23	ENSGT01030000235172.a.a	ENSGT00940000165453.f	ENSGT00940000166814	ENSGT00940000163991.cb.b.b.b	ENSGT00940000163991.cb.b.a.a	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.h	ENSGT01050000244874.a.a.a.b.a.b.g.a	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.b.ab	ENSGT01100000263565.b.a.b.b.a.a.j	ENSGT00940000156745.a.e #25	ENSGT00390000003715.d #26
Salmoninae_a	ANCESTRAL SPECIES	56	ENSGT00390000017913.`b.a.a	ENSGT00940000158168.m	ENSGT00390000015980.e	ENSGT00940000164637.y	ENSGT00940000163939.d	ENSGT00390000018660.k.a	ENSGT01100000263515.a.b.a.a.e	ENSGT00940000159135.f	ENSGT00940000159135.e.b	ENSGT00940000155368.g.b.b #15	ENSGT00390000000970.g #16	ENSGT00940000156760.f #17	ENSGT00940000160473	ENSGT00390000006591.q.a #19	ENSGT00940000154019.a.e.b.a.a #21	ENSGT00390000004493 #22	ENSGT00940000157185.c.a #23	ENSGT01030000235172.a.a	ENSGT00940000165453.f	ENSGT00940000166814	ENSGT00940000163991.cb.b.b.a.b.b	ENSGT00940000163991.cb.b.b.b.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.h	ENSGT01050000244874.a.a.a.b.a.b.g.a	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.b.ab	ENSGT01100000263565.b.a.b.b.a.a.j	ENSGT00940000156745.a.e #25	ENSGT00390000003715.d #26
Salmo	ANCESTRAL SPECIES	68	ENSGT00960000186767	ENSGT00390000017913.`b.a.a	ENSGT00940000158168.m	ENSGT00390000015980.e	ENSGT00940000164637.y	ENSGT00940000163939.d	ENSGT00390000018660.k.a	ENSGT01100000263515.a.b.a.a.e	ENSGT00940000159135.e.b	ENSGT00940000155368.g.b.b #15	ENSGT00390000000970.g #16	ENSGT00940000156760.e.b.b #17	ENSGT00940000160473	ENSGT00390000006591.q.a #19	ENSGT00940000154019.a.e.b.a.a #21	ENSGT00390000004493 #22	ENSGT00940000157185.c.a #23	ENSGT00940000165453.f	ENSGT00940000166814	ENSGT00940000163991.cb.b.b.b.a	ENSGT00940000163991.cb.b.a.a.a	ENSGT00940000163991.cb.a.a.a.b	ENSGT00940000163991.cb.a.a.a.a.a	ENSGT00940000163991.cb.b.b.a.a	ENSGT00940000163991.cb.a.a.b.a	ENSGT01050000244874.b	ENSGT00940000163991.bb	ENSGT01050000244874.a.a.a.b.a.b.g.a	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.b.ab
Atlantic salmon	MODERN SPECIES	28	ENSSSAG00000100476	pdcd10a (ENSSSAG00000068498)	ENSSSAG00000068526	ENSSSAG00000068532	ENSSSAG00000068529	ENSSSAG00000081861	ENSSSAG00000068542	ENSSSAG00000092865	ENSSSAG00000068573	tiparp (ENSSSAG00000068880) #15	ssr3 (ENSSSAG00000064882) #16	KCNAB1 (ENSSSAG00000091393) #17	ENSSSAG00000069209	gmps (ENSSSAG00000053700) #19	slc33a1 (ENSSSAG00000120200) #21	c18h3orf33 (ENSSSAG00000069197) #22	ENSSSAG00000088493	PLCH1 (ENSSSAG00000120376) #23	ENSSSAG00000069182	ENSSSAG00000069170	ENSSSAG00000057354	ENSSSAG00000120572	ENSSSAG00000111539	ENSSSAG00000069165	ENSSSAG00000094180	ENSSSAG00000086389	ENSSSAG00000038072	ENSSSAG00000108780	ENSSSAG00000038268	ENSSSAG00000039213	ENSSSAG00000039290
River trout	MODERN SPECIES	4	ENSSTUG00000032421	ENSSTUG00000032464	veph1 (ENSSTUG00000032474)	PTX3 (ENSSTUG00000032489)	ccnl1a (ENSSTUG00000032525)	ENSSTUG00000032630	ENSSTUG00000032633	ENSSTUG00000032641	ENSSTUG00000032652	tiparp (ENSSTUG00000032658) #15	ssr3 (ENSSTUG00000032661) #16	kcnab1a (ENSSTUG00000032680) #17	ENSSTUG00000032691	gmps (ENSSTUG00000032702) #19	slc33a1 (ENSSTUG00000032866) #21	ENSSTUG00000032880 #22	PLCH1 (ENSSTUG00000032901) #23	ENSSTUG00000032914	olfcu1 (ENSSTUG00000032931)	ENSSTUG00000032969	ENSSTUG00000032973	ENSSTUG00000033007	ENSSTUG00000033031	ENSSTUG00000033071	ENSSTUG00000033075	ENSSTUG00000033089	ENSSTUG00000033101	ENSSTUG00000033126	ENSSTUG00000033135	ENSSTUG00000033146	ENSSTUG00000033149
Oncorhynchus	ANCESTRAL SPECIES	69									ENSGT00940000159135.e.b	ENSGT00940000155368.g.b.b #15	ENSGT00390000000970.g #16	ENSGT00940000156760.f #17	ENSGT00940000160473	ENSGT00390000006591.q.a #19	ENSGT00940000154019.a.f #21	ENSGT00390000004493 #22	ENSGT00940000157185.c.a #23	ENSGT01030000235172.a.a	ENSGT00940000165453.f	ENSGT00940000166814	ENSGT00940000163991.cb.b.b.a.b.b	ENSGT00940000163991.cb.b.b.b.b.a	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.h	ENSGT01050000244874.a.a.a.b.a.b.g.a	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.b.ab	ENSGT01100000263565.b.a.b.b.a.a.j	ENSGT00940000156745.a.e #25	ENSGT00390000003715.d #26
Oncorhynchus_a	ANCESTRAL SPECIES	75									ENSGT00940000159135.e.b	ENSGT00940000155368.g.b.b #15	ENSGT00390000000970.g #16	ENSGT00940000156760.f #17	ENSGT00940000160473	ENSGT00390000006591.q.a #19	ENSGT00940000154019.a.f #21	ENSGT00390000004493 #22	ENSGT00940000157185.c.a #23	ENSGT01030000235172.a.a	ENSGT00940000165453.f	ENSGT00940000166814	ENSGT00940000163991.cb.b.a.b	ENSGT01100000263565.b.b	ENSGT00940000163991.cb.b.a.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.b.h	ENSGT01050000244874.a.a.a.b.a.b.g.a	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.b.ab	ENSGT01100000263565.b.a.b.b.a.a.j	ENSGT00940000156745.a.e #25
Coho salmon	MODERN SPECIES	9	CHAC2 (ENSOKIG00005004650)	ENSOKIG00005004643	ENSOKIG00005004599	ENSOKIG00005004591	ENTPD1 (ENSOKIG00005004543)	ccnl1a (ENSOKIG00005004382)	TIPARP (ENSOKIG00005004302) #15	ssr3 (ENSOKIG00005018628) #16	kcnab1a (ENSOKIG00005018523) #17	ENSOKIG00005018504	gmps (ENSOKIG00005018434) #19	ENSOKIG00005018409	ENSOKIG00005018403 #21	ENSOKIG00005018394	slc33a1 (ENSOKIG00005018390) #21	c18h3orf33 (ENSOKIG00005018371) #22	PLCH1 (ENSOKIG00005018324) #23	ENSOKIG00005018317	ENSOKIG00005018310	olfcu1 (ENSOKIG00005018264)	ENSOKIG00005018254	ENSOKIG00005018192	ENSOKIG00005018173	ENSOKIG00005018164	ENSOKIG00005018157	ENSOKIG00005018152	ENSOKIG00005018142	olfcj1 (ENSOKIG00005018134)	olfcg6 (ENSOKIG00005018127)	ENSOKIG00005018113	ENSOKIG00005018104
Chinook salmon	MODERN SPECIES	5	ENSOTSG00005004010	ENSOTSG00005003925	ENSOTSG00005003913	ENSOTSG00005003911	urb1 (ENSOTSG00005003888)	ENSOTSG00005003885	ENSOTSG00005003883	ift20 (ENSOTSG00005003881)	tnfaip1 (ENSOTSG00005003867)	ENSOTSG00005003866	cldn8.3 (ENSOTSG00005003865)	ENSOTSG00005003860	arrb1 (ENSOTSG00005003662)	ENSOTSG00005003660 #28	GPR149 (ENSOTSG00005003658) #26	c18h3orf33 (ENSOTSG00005003656) #22	ENSOTSG00005003654	ENSOTSG00005003648	ENSOTSG00005003646	ENSOTSG00005003644	ENSOTSG00005003578	ENSOTSG00005003571	ENSOTSG00005003301	olfcg6 (ENSOTSG00005003169)	olfcj1 (ENSOTSG00005003163)	ENSOTSG00005003153	ENSOTSG00005003124	ENSOTSG00005003096	ENSOTSG00005003060	ccnl1a (ENSOTSG00005002581)	ENSOTSG00005002241
Huchen	MODERN SPECIES	7149															slc33a1 (ENSHHUG00000014217) #21	c18h3orf33 (ENSHHUG00000014213) #22
Northern pike	MODERN SPECIES		serpini1 (ENSELUG00000008391)	ENSELUG00000008268	ENSELUG00000008467	ENSELUG00000008503	veph1 (ENSELUG00000008539)	PTX3 (ENSELUG00000008512)	ccnl1a (ENSELUG00000008590)	ENSELUG00000000325	tiparp (ENSELUG00000008647) #15	ssr3 (ENSELUG00000024805) #16	KCNAB1 (ENSELUG00000000328) #17	ENSELUG00000008754	gmps (ENSELUG00000008772) #19	slc33a1 (ENSELUG00000008801) #21	ENSELUG00000027243	c18h3orf33 (ENSELUG00000025667) #22	PLCH1 (ENSELUG00000008909) #23	ENSELUG00000008970	ENSELUG00000011279	olfcq3 (ENSELUG00000011328)	olfcu1 (ENSELUG00000011382)	ENSELUG00000012970	ENSELUG00000013484	ENSELUG00000014237	ENSELUG00000014482	ENSELUG00000014516	ENSELUG00000018064	ENSELUG00000014536	ENSELUG00000014573	ENSELUG00000026759	olfcj1 (ENSELUG00000018092)
Osteoglossiformes	ANCESTRAL SPECIES	14	ENSGT00940000158168	ENSGT00390000015980	ENSGT00940000164637	ENSGT00940000163939	ENSGT01100000263515.a.b.a.a	ENSGT00390000018660	ENSGT00940000169328.a.a	ENSGT00940000159135	ENSGT00940000162647	ENSGT00940000155368 #15	ENSGT00390000000970 #16	ENSGT00940000156760.e.b #17	ENSGT00940000160473	ENSGT00390000006591 #19	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000165453	ENSGT00940000162782	ENSGT00940000166814	ENSGT00940000163991	ENSGT01100000263565.b.a.b.b.b	ENSGT01100000263565.b.a.b.b.a.b	ENSGT01050000244874.b	ENSGT01050000244874.a.a.a.b.a.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.b	ENSGT01050000244874.a.a.a.b.a.a.a.b	ENSGT01050000244874.a.a.a.a	ENSGT01050000244874.a.a.a.b.a.a.b	ENSGT01050000244874.a.a.b	ENSGT01100000263565.b.a.b.a
P. kingsleyae	MODERN SPECIES	46	pdcd10b (ENSPKIG00000024386)	serpini1 (ENSPKIG00000024487)	ENSPKIG00000024500	ENSPKIG00000024512	ENSPKIG00000024528	veph1 (ENSPKIG00000024540)	ENSPKIG00000024554	ccnl1a (ENSPKIG00000024570)	ENSPKIG00000024595	tiparp (ENSPKIG00000024616) #15	ssr3 (ENSPKIG00000024635) #16	KCNAB1 (ENSPKIG00000024661) #17	ENSPKIG00000024685	gmps (ENSPKIG00000024697) #19	slc33a1 (ENSPKIG00000024720) #21	c18h3orf33 (ENSPKIG00000024734) #22	PLCH1 (ENSPKIG00000024765) #23	olfcq3 (ENSPKIG00000024812)	olfcu1 (ENSPKIG00000024822)	ENSPKIG00000024885
Asian bonytongue	MODERN SPECIES	1	serpini1 (ENSSFOG00015001922)	ENSSFOG00015032645	ENSSFOG00015001879	ENSSFOG00015001829	PTX3 (ENSSFOG00015028578)	veph1 (ENSSFOG00015028924)	ENSSFOG00015028603	ccnl1a (ENSSFOG00015001732)	ENSSFOG00015001719	TIPARP (ENSSFOG00015029700) #15	ssr3 (ENSSFOG00015033336) #16	KCNAB1 (ENSSFOG00015001635) #17	ENSSFOG00015001602	gmps (ENSSFOG00015001520) #19	slc33a1 (ENSSFOG00015001473) #21	c18h3orf33 (ENSSFOG00015001468) #22	PLCH1 (ENSSFOG00015001415) #23	ENSSFOG00015001221	olfcq3 (ENSSFOG00015001074)	olfcu1 (ENSSFOG00015001006)	ENSSFOG00015025748	ENSSFOG00015032124	ENSSFOG00015032259	ENSSFOG00015032557	ENSSFOG00015030213	ENSSFOG00015032269	ENSSFOG00015027108	ENSSFOG00015020552	ENSSFOG00015028007	ENSSFOG00015032040	ENSSFOG00015032755
Spotted gar	MODERN SPECIES	652	serpini1 (ENSLOCG00000003396)	ENSLOCG00000003382	ENSLOCG00000003367	PTX3 (ENSLOCG00000003357)	veph1 (ENSLOCG00000003346)	ENSLOCG00000003330	ccnl1a (ENSLOCG00000003314)	LEKR1 (ENSLOCG00000003307)	tiparp (ENSLOCG00000003293) #15	ssr3 (ENSLOCG00000003280) #16	kcnab1a (ENSLOCG00000003246) #17	ENSLOCG00000003230	ENSLOCG00000003204	gmps (ENSLOCG00000003174) #19	slc33a1 (ENSLOCG00000003159) #21	c18h3orf33 (ENSLOCG00000003149) #22	PLCH1 (ENSLOCG00000003130) #23	ENSLOCG00000003112	ENSLOCG00000003084	ENSLOCG00000003047	ENSLOCG00000003038	ENSLOCG00000003018	ENSLOCG00000003003	ENSLOCG00000002990	ENSLOCG00000002973	ENSLOCG00000002957	ENSLOCG00000002946	olfcu1 (ENSLOCG00000002932)	ENSLOCG00000002906	ENSLOCG00000002892	ENSLOCG00000002875
Reedfish	MODERN SPECIES	10	ENSECRG00000010278	veph1 (ENSECRG00000010298)	PTX3 (ENSECRG00000010311)	ENSECRG00000010331	ccnl1a (ENSECRG00000010360)	LEKR1 (ENSECRG00000010372)	ENSECRG00000010373 #14	TIPARP (ENSECRG00000010375) #15	ssr3 (ENSECRG00000010382) #16	kcnab1a (ENSECRG00000010388) #17	gale (ENSECRG00000010399)	ENSECRG00000010407	ENSECRG00000010428	gmps (ENSECRG00000010464) #19	slc33a1 (ENSECRG00000010484) #21	c18h3orf33 (ENSECRG00000010494) #22	PLCH1 (ENSECRG00000010521) #23	ENSECRG00000010565	ENSECRG00000010574	ENSECRG00000010597	ENSECRG00000010624	ENSECRG00000010646	ENSECRG00000010654	ENSECRG00000010659	ENSECRG00000010665	ENSECRG00000010672	ENSECRG00000010692	ENSECRG00000010784	ENSECRG00000010787	ENSECRG00000010791	ENSECRG00000010796
Elephant shark	MODERN SPECIES	1486	ENSCMIG00000018935	ENSCMIG00000018936	ENSCMIG00000018939	veph1 (ENSCMIG00000000184)	PTX3 (ENSCMIG00000000188)	ENSCMIG00000000199	ccnl1a (ENSCMIG00000000360)	LEKR1 (ENSCMIG00000000416)	TIPARP (ENSCMIG00000000432) #15	ssr3 (ENSCMIG00000000446) #16	kcnab1a (ENSCMIG00000000504) #17	ENSCMIG00000000520	ENSCMIG00000000536	gmps (ENSCMIG00000000610) #19	slc33a1 (ENSCMIG00000000865) #21	C3orf33 (ENSCMIG00000000870) #22	PLCH1 (ENSCMIG00000000888) #23	ENSCMIG00000001004	ENSCMIG00000001178	ENSCMIG00000001393	CCDC150 (ENSCMIG00000001447)	nceh1b.1 (ENSCMIG00000001486)	ect2 (ENSCMIG00000001575)	SPATA16 (ENSCMIG00000001766)	nlgn1 (ENSCMIG00000001796)	NAALADL2 (ENSCMIG00000001850)	TBL1XR1 (ENSCMIG00000002022)	kcnmb2 (ENSCMIG00000002407)	ZMAT3 (ENSCMIG00000002413)	PIK3CA (ENSCMIG00000002435)	MFN1 (ENSCMIG00000002484)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00390000004493 #22
Hagfish	MODERN SPECIES	874					ENSEBUG00000000339	ENSEBUG00000008059	ENSEBUG00000006539	ENSEBUG00000009154	ENSEBUG00000006003	ENSEBUG00000003049	ENSEBUG00000007247	ENSEBUG00000006912	ENSEBUG00000015490	ENSEBUG00000008830	ENSEBUG00000016949	ENSEBUG00000007067 #22	ENSEBUG00000013348	ENSEBUG00000008407	ENSEBUG00000012750	ENSEBUG00000010032	ENSEBUG00000001167	ENSEBUG00000002020	ENSEBUG00000005147	ENSEBUG00000011286	ENSEBUG00000014481	ENSEBUG00000011761	ENSEBUG00000002555