Tetrapoda	ANCESTRAL SPECIES	12	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000165173	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT01100000263565.b.b	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT01100000263536.B.d	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Amniota	ANCESTRAL SPECIES	13	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Mammalia	ANCESTRAL SPECIES	7	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Theria	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Eutheria	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Primates	ANCESTRAL SPECIES	1	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Lemuriformes	ANCESTRAL SPECIES	30	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Lemuriformes_a	ANCESTRAL SPECIES	77	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Greater bamboo lemur	MODERN SPECIES	448			SHOX2 (ENSPSMG00000001995) #9	ENSPSMG00000002005 #10	VEPH1 (ENSPSMG00000002055) #11	PTX3 (ENSPSMG00000002124) #12	CCNL1 (ENSPSMG00000002156) #13	LEKR1 (ENSPSMG00000002201) #14	ENSPSMG00000002207 #15	TIPARP (ENSPSMG00000002213) #16	SSR3 (ENSPSMG00000002232) #17	KCNAB1 (ENSPSMG00000002464) #18	ENSPSMG00000002894 #19	GMPS (ENSPSMG00000003004) #20	ENSPSMG00000003046 #21	C3orf33 (ENSPSMG00000003083) #22	PLCH1 (ENSPSMG00000003152) #23	STRIT1 (ENSPSMG00000003191) #24	MME (ENSPSMG00000003300) #25	GPR149 (ENSPSMG00000003410) #26	DHX36 (ENSPSMG00000003457) #27	ARHGEF26 (ENSPSMG00000003482) #28	RAP2B (ENSPSMG00000003499) #29	ENSPSMG00000003506 #30	P2RY1 (ENSPSMG00000003519) #31	ENSPSMG00000003526 #32	MBNL1 (ENSPSMG00000003701) #33	SUCNR1 (ENSPSMG00000004001) #34	AADAC (ENSPSMG00000004101) #35	AADACL2 (ENSPSMG00000004164) #36	IGSF10 (ENSPSMG00000004167) #37
Coquerels sifaka	MODERN SPECIES	274	GFM1 (ENSPCOG00000022259)	LXN (ENSPCOG00000027480)	MLF1 (ENSPCOG00000024606)	RSRC1 (ENSPCOG00000024048)	SHOX2 (ENSPCOG00000028731) #9	ENSPCOG00000001436	VEPH1 (ENSPCOG00000018922) #11	PTX3 (ENSPCOG00000024857) #12	CCNL1 (ENSPCOG00000015763) #13	LEKR1 (ENSPCOG00000008154) #14	TIPARP (ENSPCOG00000018471) #16	SSR3 (ENSPCOG00000017371) #17	KCNAB1 (ENSPCOG00000013343) #18	GMPS (ENSPCOG00000024460) #20	SLC33A1 (ENSPCOG00000021978) #21	C3orf33 (ENSPCOG00000007724) #22	PLCH1 (ENSPCOG00000028591) #23	STRIT1 (ENSPCOG00000015379) #24	MME (ENSPCOG00000013543) #25	GPR149 (ENSPCOG00000027399) #26	ENSPCOG00000011695 #27	ARHGEF26 (ENSPCOG00000012536) #28	ENSPCOG00000022566	RAP2B (ENSPCOG00000009740) #29	P2RY1 (ENSPCOG00000026439) #31	MBNL1 (ENSPCOG00000023511) #33	SUCNR1 (ENSPCOG00000019814) #34	AADACL2 (ENSPCOG00000003911) #36	IGSF10 (ENSPCOG00000018106) #37	MED12L (ENSPCOG00000020951)	P2RY12 (ENSPCOG00000011471)
Mouse lemur	MODERN SPECIES		TRANK1 (ENSMICG00000048569)	DCLK3 (ENSMICG00000049233)	STAC (ENSMICG00000048960)	ENSMICG00000049147	ARPP21 (ENSMICG00000049108)	ENSMICG00000049253	ENSMICG00000048912	ENSMICG00000048653	TIPARP (ENSMICG00000049557) #16	SSR3 (ENSMICG00000049476) #17	KCNAB1 (ENSMICG00000049495) #18	ENSMICG00000049259	ENSMICG00000049568 #20	ENSMICG00000049266	SLC33A1 (ENSMICG00000048976) #21	C3orf33 (ENSMICG00000049160) #22	PLCH1 (ENSMICG00000049386) #23	STRIT1 (ENSMICG00000048533) #24	MME (ENSMICG00000049514) #25	GPR149 (ENSMICG00000049352) #26	DHX36 (ENSMICG00000049093) #27	ARHGEF26 (ENSMICG00000049586) #28	RAP2B (ENSMICG00000049585) #29	P2RY1 (ENSMICG00000049127) #31	MBNL1 (ENSMICG00000049530) #33	SUCNR1 (ENSMICG00000049176) #34	AADAC (ENSMICG00000049479) #35	AADACL2 (ENSMICG00000048956) #36	IGSF10 (ENSMICG00000048902) #37	MED12L (ENSMICG00000049284)	P2RY12 (ENSMICG00000048971)
Bushbaby	MODERN SPECIES	191	GFM1 (ENSOGAG00000008298)	MLF1 (ENSOGAG00000008294)	ENSOGAG00000025716	ENSOGAG00000008290	SHOX2 (ENSOGAG00000008288) #9	PTX3 (ENSOGAG00000007529) #12	VEPH1 (ENSOGAG00000007526) #11	CCNL1 (ENSOGAG00000011592) #13	ENSOGAG00000016012 #14	TIPARP (ENSOGAG00000003455) #16	SSR3 (ENSOGAG00000010589) #17	KCNAB1 (ENSOGAG00000010587) #18	ENSOGAG00000028827 #19	GMPS (ENSOGAG00000008523) #20	SLC33A1 (ENSOGAG00000008518) #21	C3orf33 (ENSOGAG00000014996) #22	PLCH1 (ENSOGAG00000031120) #23	MME (ENSOGAG00000010918) #25	GPR149 (ENSOGAG00000011263) #26	DHX36 (ENSOGAG00000011256) #27	ARHGEF26 (ENSOGAG00000011252) #28	RAP2B (ENSOGAG00000033694) #29	P2RY1 (ENSOGAG00000030721) #31	MBNL1 (ENSOGAG00000032201) #33	SUCNR1 (ENSOGAG00000000482) #34	ENSOGAG00000014492 #35	ENSOGAG00000009739 #35
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Hominidae	ANCESTRAL SPECIES	2	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37
Pan	ANCESTRAL SPECIES	2	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000154281.m.b.a.a.b.a	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000017288.d	ENSGT00390000008647.e.a.a.a.b.a.a	ENSGT00940000154891.g.a.b.a.a	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00950000183755	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35
Chimpanzee	MODERN SPECIES	16	SLC66A1L (ENSPTRG00000015566)	PTX3 (ENSPTRG00000015565) #12	VEPH1 (ENSPTRG00000022665) #11	CCNL1 (ENSPTRG00000015563) #13	LEKR1 (ENSPTRG00000024220) #14	ENSPTRG00000040050	TIPARP (ENSPTRG00000015561) #16	SSR3 (ENSPTRG00000048398) #17	KCNAB1 (ENSPTRG00000044809) #18	ENSPTRG00000051749	ENSPTRG00000052355	ENSPTRG00000041304	ENSPTRG00000032585	GMPS (ENSPTRG00000015555) #20	SLC33A1 (ENSPTRG00000015554) #21	C3H3orf33 (ENSPTRG00000015553) #22	PLCH1 (ENSPTRG00000015551) #23	ENSPTRG00000045319	STRIT1 (ENSPTRG00000051466) #24	MME (ENSPTRG00000015550) #25	ENSPTRG00000045019	ENSPTRG00000044913	GPR149 (ENSPTRG00000015549) #26	DHX36 (ENSPTRG00000015548) #27	ARHGEF26 (ENSPTRG00000015546) #28	RAP2B (ENSPTRG00000052751) #29	ENSPTRG00000043810	ENSPTRG00000042826	P2RY1 (ENSPTRG00000015543) #31	MBNL1 (ENSPTRG00000015542) #33	SUCNR1 (ENSPTRG00000030092) #34
Bonobo	MODERN SPECIES	16	RSRC1 (ENSPPAG00000034990)	SHOX2 (ENSPPAG00000022372) #9	PTX3 (ENSPPAG00000035181) #12	VEPH1 (ENSPPAG00000034788) #11	CCNL1 (ENSPPAG00000033713) #13	LEKR1 (ENSPPAG00000028869) #14	ENSPPAG00000033599	TIPARP (ENSPPAG00000029528) #16	SSR3 (ENSPPAG00000034664) #17	KCNAB1 (ENSPPAG00000030046) #18	ENSPPAG00000031413	ENSPPAG00000008889	ENSPPAG00000031281	GMPS (ENSPPAG00000042787) #20	SLC33A1 (ENSPPAG00000028834) #21	C3orf33 (ENSPPAG00000040302) #22	PLCH1 (ENSPPAG00000015015) #23	ENSPPAG00000037955	STRIT1 (ENSPPAG00000028301) #24	MME (ENSPPAG00000019817) #25	SLC43A3 (ENSPPAG00000028764)	PRG2 (ENSPPAG00000005293)	PRG3 (ENSPPAG00000039813)	P2RX3 (ENSPPAG00000037750)	SSRP1 (ENSPPAG00000039088)	TNKS1BP1 (ENSPPAG00000039200)	APLNR (ENSPPAG00000007352)	LRRC55 (ENSPPAG00000030647)	OR5AK2 (ENSPPAG00000006294)	OR5AK3P (ENSPPAG00000008152)	ENSPPAG00000033428
Human	MODERN SPECIES	15	RARRES1 (ENSG00000118849)	LXN (ENSG00000079257)	GFM1 (ENSG00000168827)	MLF1 (ENSG00000178053)	RSRC1 (ENSG00000174891)	SHOX2 (ENSG00000168779) #9	PTX3 (ENSG00000163661) #12	VEPH1 (ENSG00000197415) #11	CCNL1 (ENSG00000163660) #13	LEKR1 (ENSG00000197980) #14	TIPARP (ENSG00000163659) #16	SSR3 (ENSG00000114850) #17	KCNAB1 (ENSG00000169282) #18	GMPS (ENSG00000163655) #20	SLC33A1 (ENSG00000169359) #21	C3orf33 (ENSG00000174928) #22	PLCH1 (ENSG00000114805) #23	STRIT1 (ENSG00000240045) #24	MME (ENSG00000196549) #25	GPR149 (ENSG00000174948) #26	DHX36 (ENSG00000174953) #27	ARHGEF26 (ENSG00000114790) #28	RAP2B (ENSG00000181467) #29	P2RY1 (ENSG00000169860) #31	MBNL1 (ENSG00000152601) #33	SUCNR1 (ENSG00000198829) #34	AADAC (ENSG00000114771) #35	AADACL2 (ENSG00000197953) #36	IGSF10 (ENSG00000152580) #37	P2RY12 (ENSG00000169313)	P2RY13 (ENSG00000181631)
Gorilla	MODERN SPECIES	16	RSRC1 (ENSGGOG00000042322)	SHOX2 (ENSGGOG00000011637) #9	ENSGGOG00000028322	PTX3 (ENSGGOG00000015338) #12	VEPH1 (ENSGGOG00000034894) #11	CCNL1 (ENSGGOG00000006249) #13	LEKR1 (ENSGGOG00000025297) #14	TIPARP (ENSGGOG00000026270) #16	SSR3 (ENSGGOG00000024038) #17	ENSGGOG00000023817	KCNAB1 (ENSGGOG00000007488) #18	ENSGGOG00000024916	ENSGGOG00000041405	GMPS (ENSGGOG00000017082) #20	SLC33A1 (ENSGGOG00000013029) #21	C3orf33 (ENSGGOG00000024967) #22	ENSGGOG00000038553	ENSGGOG00000039947	PLCH1 (ENSGGOG00000009552) #23	ENSGGOG00000039851	STRIT1 (ENSGGOG00000037301) #24	MME (ENSGGOG00000013260) #25	ENSGGOG00000022568	GPR149 (ENSGGOG00000001655) #26	DHX36 (ENSGGOG00000034937) #27	ARHGEF26 (ENSGGOG00000009951) #28	RAP2B (ENSGGOG00000041894) #29	ENSGGOG00000039329	ENSGGOG00000039036	P2RY1 (ENSGGOG00000000031) #31	MBNL1 (ENSGGOG00000009430) #33
Orangutan	MODERN SPECIES	16	GFM1 (ENSPPYG00000014244)	MLF1 (ENSPPYG00000037889)	RSRC1 (ENSPPYG00000014242)	SHOX2 (ENSPPYG00000032262) #9	ENSPPYG00000040849	PTX3 (ENSPPYG00000014239) #12	VEPH1 (ENSPPYG00000014238) #11	CCNL1 (ENSPPYG00000014237) #13	LEKR1 (ENSPPYG00000014236) #14	ENSPPYG00000032921	TIPARP (ENSPPYG00000014234) #16	SSR3 (ENSPPYG00000014233) #17	KCNAB1 (ENSPPYG00000014232) #18	GMPS (ENSPPYG00000014229) #20	SLC33A1 (ENSPPYG00000014228) #21	C3orf33 (ENSPPYG00000014227) #22	PLCH1 (ENSPPYG00000014225) #23	STRIT1 (ENSPPYG00000039457) #24	MME (ENSPPYG00000014224) #25	GPR149 (ENSPPYG00000014223) #26	DHX36 (ENSPPYG00000014222) #27	ARHGEF26 (ENSPPYG00000014221) #28	RAP2B (ENSPPYG00000014220) #29	P2RY1 (ENSPPYG00000014219) #31	MBNL1 (ENSPPYG00000014218) #33	SUCNR1 (ENSPPYG00000030493) #34	AADAC (ENSPPYG00000041034) #35	AADACL2 (ENSPPYG00000014217) #36	IGSF10 (ENSPPYG00000014216) #37	P2RY12 (ENSPPYG00000014215)	P2RY13 (ENSPPYG00000014214)
Gibbon	MODERN SPECIES	1	RSRC1 (ENSNLEG00000004137)	SHOX2 (ENSNLEG00000004124) #9	ENSNLEG00000004110	PTX3 (ENSNLEG00000004099) #12	VEPH1 (ENSNLEG00000004031) #11	CCNL1 (ENSNLEG00000003998) #13	LEKR1 (ENSNLEG00000003993) #14	ENSNLEG00000028927	TIPARP (ENSNLEG00000003977) #16	SSR3 (ENSNLEG00000003961) #17	ENSNLEG00000029311	KCNAB1 (ENSNLEG00000028736) #18	ENSNLEG00000034563	GMPS (ENSNLEG00000003856) #20	SLC33A1 (ENSNLEG00000031523) #21	C3orf33 (ENSNLEG00000032487) #22	PLCH1 (ENSNLEG00000003776) #23	ENSNLEG00000030011	STRIT1 (ENSNLEG00000028242) #24	MME (ENSNLEG00000003737) #25	ENSNLEG00000035506	GPR149 (ENSNLEG00000003727) #26	DHX36 (ENSNLEG00000003640) #27	ARHGEF26 (ENSNLEG00000003599) #28	RAP2B (ENSNLEG00000030720) #29	P2RY1 (ENSNLEG00000018933) #31	MBNL1 (ENSNLEG00000003537) #33	SUCNR1 (ENSNLEG00000003536) #34	AADAC (ENSNLEG00000031553) #35	AADACL2 (ENSNLEG00000003525) #36	IGSF10 (ENSNLEG00000003516) #37
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.u #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Macaca	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.u #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00910000148059	ENSGT00390000017288.d	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Pig-tailed macaque	MODERN SPECIES	147	MLF1 (ENSMNEG00000037020)	RSRC1 (ENSMNEG00000037212)	SHOX2 (ENSMNEG00000044817) #9	ENSMNEG00000013326	VEPH1 (ENSMNEG00000032781) #11	PTX3 (ENSMNEG00000032162) #12	CCNL1 (ENSMNEG00000042991) #13	LEKR1 (ENSMNEG00000032090) #14	TIPARP (ENSMNEG00000041085) #16	SSR3 (ENSMNEG00000043849) #17	KCNAB1 (ENSMNEG00000030568) #18	ENSMNEG00000038579	ENSMNEG00000037898	GMPS (ENSMNEG00000029760) #20	SLC33A1 (ENSMNEG00000041243) #21	C3orf33 (ENSMNEG00000039740) #22	PLCH1 (ENSMNEG00000041537) #23	STRIT1 (ENSMNEG00000034812) #24
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00950000183087.A.a.b.b.g.e.b.b.b.b.a	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.u #17	ENSGT00940000156760 #18	ENSGT00390000017288.d	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01100000263493.a.a.b.a.b.a.a.b.a
Rhesus	MODERN SPECIES	11	RSRC1 (ENSMMUG00000004956)	SHOX2 (ENSMMUG00000019030) #9	ENSMMUG00000051699	SLC66A1L (ENSMMUG00000012046)	PTX3 (ENSMMUG00000062582) #12	VEPH1 (ENSMMUG00000022848) #11	CCNL1 (ENSMMUG00000016497) #13	ENSMMUG00000058575	LEKR1 (ENSMMUG00000016495) #14	TIPARP (ENSMMUG00000000366) #16	SSR3 (ENSMMUG00000016970) #17	KCNAB1 (ENSMMUG00000016968) #18	ENSMMUG00000062803	GMPS (ENSMMUG00000007324) #20	SLC33A1 (ENSMMUG00000040085) #21	C2H3orf33 (ENSMMUG00000049932) #22	PLCH1 (ENSMMUG00000018341) #23	STRIT1 (ENSMMUG00000060633) #24	MME (ENSMMUG00000006662) #25	GPR149 (ENSMMUG00000056924) #26	DHX36 (ENSMMUG00000011347) #27	ARHGEF26 (ENSMMUG00000009036) #28	RAP2B (ENSMMUG00000015779) #29	ENSMMUG00000031543	P2RY1 (ENSMMUG00000031540) #31	MBNL1 (ENSMMUG00000015910) #33	ENSMMUG00000061194	SUCNR1 (ENSMMUG00000060077) #34	AADAC (ENSMMUG00000001664) #35	AADACL2 (ENSMMUG00000018774) #36	ENSMMUG00000031537
Crab-eating macaque	MODERN SPECIES	11	MLF1 (ENSMFAG00000032723)	RSRC1 (ENSMFAG00000006023)	SHOX2 (ENSMFAG00000029366) #9	ENSMFAG00000011761	ENSMFAG00000002259	PTX3 (ENSMFAG00000040863) #12	VEPH1 (ENSMFAG00000043410) #11	CCNL1 (ENSMFAG00000030104) #13	LEKR1 (ENSMFAG00000032575) #14	TIPARP (ENSMFAG00000040611) #16	SSR3 (ENSMFAG00000065033) #17	KCNAB1 (ENSMFAG00000032077) #18	ENSMFAG00000035446	GMPS (ENSMFAG00000039350) #20	SLC33A1 (ENSMFAG00000057969) #21	C3orf33 (ENSMFAG00000004239) #22	ENSMFAG00000039668	PLCH1 (ENSMFAG00000042166) #23	STRIT1 (ENSMFAG00000039645) #24	MME (ENSMFAG00000039633) #25	GPR149 (ENSMFAG00000030860) #26	DHX36 (ENSMFAG00000032288) #27	ARHGEF26 (ENSMFAG00000031011) #28	RAP2B (ENSMFAG00000006078) #29	P2RY1 (ENSMFAG00000005982) #31	ENSMFAG00000039510	ENSMFAG00000064185	MBNL1 (ENSMFAG00000001066) #33	SUCNR1 (ENSMFAG00000064553) #34	AADACL2 (ENSMFAG00000042922) #36	ENSMFAG00000058559
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660.e #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.u #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00910000148059	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Cercopithecinae_d	ANCESTRAL SPECIES	81	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660.e #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.u #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00910000148059	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.b.a.a.b	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00940000155901.a.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00940000164615	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Sooty mangabey	MODERN SPECIES	99	RSRC1 (ENSCATG00000036643)	SHOX2 (ENSCATG00000036242) #9	ENSCATG00000011015	PTX3 (ENSCATG00000039761) #12	VEPH1 (ENSCATG00000029319) #11	CCNL1 (ENSCATG00000035386) #13	LEKR1 (ENSCATG00000045022) #14	TIPARP (ENSCATG00000030375) #16	SSR3 (ENSCATG00000044932) #17	ENSCATG00000037986	KCNAB1 (ENSCATG00000015065) #18	ENSCATG00000039951	ENSCATG00000022003	GMPS (ENSCATG00000031121) #20	SLC33A1 (ENSCATG00000034638) #21	C3orf33 (ENSCATG00000030263) #22	PLCH1 (ENSCATG00000043865) #23	ENSCATG00000045341	STRIT1 (ENSCATG00000043299) #24	MME (ENSCATG00000038410) #25	ENSCATG00000039259	GPR149 (ENSCATG00000027247) #26	DHX36 (ENSCATG00000037545) #27	ARHGEF26 (ENSCATG00000003554) #28	RAP2B (ENSCATG00000022021) #29	ENSCATG00000021763	P2RY1 (ENSCATG00000018152) #31	MBNL1 (ENSCATG00000042844) #33	SUCNR1 (ENSCATG00000042069) #34	AADAC (ENSCATG00000013681) #35	AADACL2 (ENSCATG00000036536) #36
Drill	MODERN SPECIES	1253									TIPARP (ENSMLEG00000043232) #16	ENSMLEG00000016223 #17	KCNAB1 (ENSMLEG00000038935) #18	ENSMLEG00000028241	ENSMLEG00000010425	ENSMLEG00000035612 #20	SLC33A1 (ENSMLEG00000035020) #21	C3orf33 (ENSMLEG00000008346) #22	PLCH1 (ENSMLEG00000038044) #23	ENSMLEG00000041649	STRIT1 (ENSMLEG00000032440) #24	MME (ENSMLEG00000041566) #25
Olive baboon	MODERN SPECIES	11	SHOX2 (ENSPANG00000008663) #9	ENSPANG00000008659	ENSPANG00000037645	ENSPANG00000038418	ENSPANG00000006508	VEPH1 (ENSPANG00000010193) #11	PTX3 (ENSPANG00000015656) #12	CCNL1 (ENSPANG00000015798) #13	LEKR1 (ENSPANG00000006077) #14	TIPARP (ENSPANG00000007235) #16	ENSPANG00000006131 #17	KCNAB1 (ENSPANG00000015726) #18	ENSPANG00000029453	GMPS (ENSPANG00000017625) #20	SLC33A1 (ENSPANG00000015696) #21	C3orf33 (ENSPANG00000011556) #22	PLCH1 (ENSPANG00000020169) #23	ENSPANG00000034846	STRIT1 (ENSPANG00000034540) #24	MME (ENSPANG00000005579) #25	GPR149 (ENSPANG00000010538) #26	DHX36 (ENSPANG00000007914) #27	ARHGEF26 (ENSPANG00000022038) #28	ENSPANG00000041442	RAP2B (ENSPANG00000009630) #29	ENSPANG00000043948	ENSPANG00000005554	P2RY1 (ENSPANG00000003462) #31	MBNL1 (ENSPANG00000024746) #33	ENSPANG00000045690	ENSPANG00000045764
Vervet Monkey	MODERN SPECIES	6	LXN (ENSCSAG00000012154)	MLF1 (ENSCSAG00000012151)	RSRC1 (ENSCSAG00000012145)	SHOX2 (ENSCSAG00000012131) #9	ENSCSAG00000012112	VEPH1 (ENSCSAG00000012098) #11	PTX3 (ENSCSAG00000012090) #12	CCNL1 (ENSCSAG00000012077) #13	LEKR1 (ENSCSAG00000012071) #14	ENSCSAG00000012064	TIPARP (ENSCSAG00000012060) #16	ENSCSAG00000012048 #17	KCNAB1 (ENSCSAG00000012031) #18	GMPS (ENSCSAG00000012022) #20	SLC33A1 (ENSCSAG00000012012) #21	C3orf33 (ENSCSAG00000012008) #22	ENSCSAG00000012000 #23	MME (ENSCSAG00000011987) #25	GPR149 (ENSCSAG00000011972) #26	DHX36 (ENSCSAG00000011962) #27	ARHGEF26 (ENSCSAG00000011952) #28	RAP2B (ENSCSAG00000018898) #29	MBNL1 (ENSCSAG00000011943) #33	SUCNR1 (ENSCSAG00000011937) #34	AADAC (ENSCSAG00000011936) #35	AADACL2 (ENSCSAG00000011925) #36	IGSF10 (ENSCSAG00000011903) #37	MED12L (ENSCSAG00000011846)	P2RY12 (ENSCSAG00000018899)	P2RY13 (ENSCSAG00000011681)	GPR87 (ENSCSAG00000011679)
Rhinopithecus	ANCESTRAL SPECIES	257	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.p.a #17	ENSGT00940000156760 #18	ENSGT00940000155058.e.b	ENSGT00390000017288.d	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22
Golden snub-nosed monkey	MODERN SPECIES	1252				PTX3 (ENSRROG00000035614) #12	VEPH1 (ENSRROG00000039187) #11	CCNL1 (ENSRROG00000034433) #13	LEKR1 (ENSRROG00000044541) #14	TIPARP (ENSRROG00000041667) #16	SSR3 (ENSRROG00000037341) #17	ENSRROG00000030984	KCNAB1 (ENSRROG00000003220) #18	ENSRROG00000002902	GMPS (ENSRROG00000035915) #20	SLC33A1 (ENSRROG00000040669) #21	ENSRROG00000036896	C3orf33 (ENSRROG00000033959) #22	ENSRROG00000033946
Black snub-nosed monkey	MODERN SPECIES	154										ENSRBIG00000036028 #17	KCNAB1 (ENSRBIG00000036516) #18	ENSRBIG00000042112	ENSRBIG00000015935	GMPS (ENSRBIG00000019515) #20	SLC33A1 (ENSRBIG00000041101) #21	C3orf33 (ENSRBIG00000044890) #22	NSUN3 (ENSRBIG00000031551)	ARL13B (ENSRBIG00000005607)	STX19 (ENSRBIG00000036539)	PROS1 (ENSRBIG00000028014)
Platyrrhini	ANCESTRAL SPECIES	22	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251.a	ENSGT00730000111251.b	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.n.a.a #17	ENSGT00940000156760 #18	ENSGT00390000006591.d #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586
Cebidae	ANCESTRAL SPECIES	22	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251.b	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.n.a.b #17	ENSGT00940000156760 #18	ENSGT00390000006591.d #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Cebidae_a	ANCESTRAL SPECIES	12	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251.b	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b.n.a.b #17	ENSGT00940000156760 #18	ENSGT00390000006591.d #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000153773.a.a.b.c.a	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT00390000013091.q.a	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37
Capuchin	MODERN SPECIES	25	IAPP (ENSCCAG00000020992)	SLCO1A2 (ENSCCAG00000027720)	ENSCCAG00000033442	SLCO1B1 (ENSCCAG00000032141)	ENSCCAG00000020147	ENSCCAG00000037892	ENSCCAG00000006745	SLC35E3 (ENSCCAG00000031394)	NUP107 (ENSCCAG00000018046)	RAP1B (ENSCCAG00000034811)	TIPARP (ENSCCAG00000029051) #16	ENSCCAG00000033345 #17	KCNAB1 (ENSCCAG00000026437) #18	ENSCCAG00000031267 #20	SLC33A1 (ENSCCAG00000036825) #21	C3orf33 (ENSCCAG00000020896) #22	PLCH1 (ENSCCAG00000027178) #23	ENSCCAG00000028512	STRIT1 (ENSCCAG00000034361) #24	MME (ENSCCAG00000033778) #25	GPR149 (ENSCCAG00000037844) #26	DHX36 (ENSCCAG00000035199) #27	ARHGEF26 (ENSCCAG00000025030) #28	ENSCCAG00000028759	ENSCCAG00000030504	RAP2B (ENSCCAG00000019904) #29	P2RY1 (ENSCCAG00000001488) #31	MBNL1 (ENSCCAG00000036732) #33	ENSCCAG00000033295	SUCNR1 (ENSCCAG00000036210) #34	AADAC (ENSCCAG00000029588) #35
Bolivian squirrel monkey	MODERN SPECIES	54	GFM1 (ENSSBOG00000023252)	LXN (ENSSBOG00000034211)	MLF1 (ENSSBOG00000024403)	RSRC1 (ENSSBOG00000027990)	SHOX2 (ENSSBOG00000035166) #9	ENSSBOG00000021272	VEPH1 (ENSSBOG00000027631) #11	PTX3 (ENSSBOG00000030163) #12	CCNL1 (ENSSBOG00000035767) #13	LEKR1 (ENSSBOG00000035709) #14	TIPARP (ENSSBOG00000030511) #16	ENSSBOG00000036066 #17	KCNAB1 (ENSSBOG00000022593) #18	GMPS (ENSSBOG00000033046) #20	SLC33A1 (ENSSBOG00000022127) #21	C3orf33 (ENSSBOG00000022745) #22	PLCH1 (ENSSBOG00000035699) #23	ENSSBOG00000005590	STRIT1 (ENSSBOG00000010194) #24	ENSSBOG00000028023	MME (ENSSBOG00000016144) #25	GPR149 (ENSSBOG00000019206) #26	ENSSBOG00000014186	DHX36 (ENSSBOG00000024666) #27	ARHGEF26 (ENSSBOG00000019075) #28	RAP2B (ENSSBOG00000010993) #29	P2RY1 (ENSSBOG00000017142) #31	MBNL1 (ENSSBOG00000020980) #33	ENSSBOG00000036049	SUCNR1 (ENSSBOG00000035745) #34	AADAC (ENSSBOG00000018433) #35
Marmoset	MODERN SPECIES	8	SHOX2 (ENSCJAG00000073951) #9	ENSCJAG00000084466	ENSCJAG00000022309	ENSCJAG00000043693	VEPH1 (ENSCJAG00000004747) #11	PTX3 (ENSCJAG00000004771) #12	CCNL1 (ENSCJAG00000004692) #13	LEKR1 (ENSCJAG00000004676) #14	TIPARP (ENSCJAG00000004657) #16	ENSCJAG00000045770 #17	KCNAB1 (ENSCJAG00000004577) #18	ENSCJAG00000065233	ENSCJAG00000001100	GMPS (ENSCJAG00000000863) #20	SLC33A1 (ENSCJAG00000000902) #21	C3orf33 (ENSCJAG00000000910) #22	PLCH1 (ENSCJAG00000000917) #23	ENSCJAG00000078846	ENSCJAG00000072151	ENSCJAG00000073626	STRIT1 (ENSCJAG00000042341) #24	MME (ENSCJAG00000000959) #25	GPR149 (ENSCJAG00000000982) #26	DHX36 (ENSCJAG00000000986) #27	ARHGEF26 (ENSCJAG00000001036) #28	ENSCJAG00000075144	P2RY1 (ENSCJAG00000046851) #31	MBNL1 (ENSCJAG00000040560) #33	SUCNR1 (ENSCJAG00000064247) #34	AADAC (ENSCJAG00000001084) #35	ENSCJAG00000051341 #35
Mas night monkey	MODERN SPECIES	400	LXN (ENSANAG00000024771)	MLF1 (ENSANAG00000026540)	ENSANAG00000029278	SHOX2 (ENSANAG00000013863) #9	ENSANAG00000036049	VEPH1 (ENSANAG00000020731) #11	PTX3 (ENSANAG00000021902) #12	ENSANAG00000037179	CCNL1 (ENSANAG00000035618) #13	LEKR1 (ENSANAG00000025264) #14	TIPARP (ENSANAG00000036588) #16	ENSANAG00000025983 #17	KCNAB1 (ENSANAG00000032104) #18	ENSANAG00000036394 #20	SLC33A1 (ENSANAG00000036331) #21	C3orf33 (ENSANAG00000037818) #22	PLCH1 (ENSANAG00000037829) #23	ENSANAG00000026678	STRIT1 (ENSANAG00000035345) #24
Tarsier	MODERN SPECIES	5499															SLC33A1 (ENSTSYG00000006999) #21	C3orf33 (ENSTSYG00000002939) #22	PLCH1 (ENSTSYG00000007326) #23
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Tree shrew	MODERN SPECIES	3998														GMPS (ENSTBEG00000000630) #20	SLC33A1 (ENSTBEG00000000568) #21	C3orf33 (ENSTBEG00000000470) #22
Glires	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Lagomorpha	ANCESTRAL SPECIES	6	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01080000259023	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT01060000248592.C	ENSGT01060000248589.B	ENSGT00440000037505.a	ENSGT00850000132319.a.a.a	ENSGT00940000162644
Rabbit	MODERN SPECIES	5	SHOX2 (ENSOCUG00000029123) #9	ENSOCUG00000035608	PTX3 (ENSOCUG00000010142) #12	VEPH1 (ENSOCUG00000010133) #11	CCNL1 (ENSOCUG00000003451) #13	ENSOCUG00000034465	LEKR1 (ENSOCUG00000011073) #14	TIPARP (ENSOCUG00000014910) #16	SSR3 (ENSOCUG00000007898) #17	ENSOCUG00000011704	KCNAB1 (ENSOCUG00000007885) #18	ENSOCUG00000002314 #19	ENSOCUG00000002317 #19	GMPS (ENSOCUG00000001480) #20	SLC33A1 (ENSOCUG00000001478) #21	C3orf33 (ENSOCUG00000017756) #22	PLCH1 (ENSOCUG00000009260) #23	ENSOCUG00000029864	ENSOCUG00000030899	ENSOCUG00000036761	MME (ENSOCUG00000017924) #25	ENSOCUG00000038376	DHX36 (ENSOCUG00000001180) #27	ARHGEF26 (ENSOCUG00000001179) #28	ENSOCUG00000036257	ENSOCUG00000027959	RAP2B (ENSOCUG00000014398) #29	P2RY1 (ENSOCUG00000010828) #31	ENSOCUG00000024369	MBNL1 (ENSOCUG00000007601) #33	ENSOCUG00000034635
Rodentia	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Myomorpha	ANCESTRAL SPECIES	38	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Muroidea	ANCESTRAL SPECIES	44	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a	ENSGT00940000158290 #37
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.a
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b.a	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.a
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b.a	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.a	ENSGT00940000158290 #37
Chinese hamster chok1gshd	MODERN SPECIES	352	Shox2 (ENSCGRG00001011092) #9	Veph1 (ENSCGRG00001013806) #11	Ptx3 (ENSCGRG00001000361) #12	ENSCGRG00001019867	Ccnl1 (ENSCGRG00001000165) #13	ENSCGRG00001012986 #14	ENSCGRG00001018287	Tiparp (ENSCGRG00001011123) #16	Ssr3 (ENSCGRG00001019723) #17	Kcnab1 (ENSCGRG00001005457) #18	ENSCGRG00001005615 #19	ENSCGRG00001017013 #19	Vmn2r1 (ENSCGRG00001023200) #19	Gmps (ENSCGRG00001018772) #20	Slc33a1 (ENSCGRG00001018761) #21	E130311K13Rik (ENSCGRG00001024290) #22	Plch1 (ENSCGRG00001000217) #23	ENSCGRG00001021700	ENSCGRG00001022762	Mme (ENSCGRG00001000828) #25	ENSCGRG00001008438	ENSCGRG00001007190	Gpr149 (ENSCGRG00001013143) #26	Dhx36 (ENSCGRG00001013722) #27	Arhgef26 (ENSCGRG00001017827) #28	Rap2b (ENSCGRG00001008789) #29	P2ry1 (ENSCGRG00001004469) #31	Mbnl1 (ENSCGRG00001007139) #33	Sucnr1 (ENSCGRG00001017063) #34	Aadac (ENSCGRG00001018575) #35	Aadacl2 (ENSCGRG00001019320) #36
Golden Hamster	MODERN SPECIES	694	ENSMAUG00000010396	Lxn (ENSMAUG00000005608)	Gfm1 (ENSMAUG00000000611)	ENSMAUG00000014811	Rsrc1 (ENSMAUG00000012551)	Shox2 (ENSMAUG00000010791) #9	Ptx3 (ENSMAUG00000013157) #12	Veph1 (ENSMAUG00000011592) #11	Ccnl1 (ENSMAUG00000010127) #13	ENSMAUG00000008702	Tiparp (ENSMAUG00000013170) #16	Ssr3 (ENSMAUG00000012131) #17	Kcnab1 (ENSMAUG00000008327) #18	Gmps (ENSMAUG00000009597) #20	Slc33a1 (ENSMAUG00000007872) #21	E130311K13Rik (ENSMAUG00000016143) #22	Plch1 (ENSMAUG00000015272) #23	ENSMAUG00000010321	Mme (ENSMAUG00000005415) #25	Gpr149 (ENSMAUG00000002545) #26	Dhx36 (ENSMAUG00000000158) #27	Arhgef26 (ENSMAUG00000020238) #28	Rap2b (ENSMAUG00000017777) #29	P2ry1 (ENSMAUG00000017609) #31	Mbnl1 (ENSMAUG00000004011) #33	Sucnr1 (ENSMAUG00000019748) #34	Aadac (ENSMAUG00000018889) #35	Aadacl2 (ENSMAUG00000007333) #36	Aadacl2fm1 (ENSMAUG00000004388)	ENSMAUG00000001015	Aadacl2fm2 (ENSMAUG00000007314)
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b.a	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.b.b
Prairie vole	MODERN SPECIES		Gfm1 (ENSMOCG00000000465)	Mlf1 (ENSMOCG00000018934)	Rsrc1 (ENSMOCG00000021372)	Shox2 (ENSMOCG00000018618) #9	Ptx3 (ENSMOCG00000022316) #12	Veph1 (ENSMOCG00000021347) #11	Ccnl1 (ENSMOCG00000020951) #13	ENSMOCG00000001595	Tiparp (ENSMOCG00000011217) #16	Ssr3 (ENSMOCG00000000580) #17	Kcnab1 (ENSMOCG00000006596) #18	ENSMOCG00000018463 #19	Vmn2r1 (ENSMOCG00000016363) #19	Gmps (ENSMOCG00000021456) #20	Slc33a1 (ENSMOCG00000015778) #21	E130311K13Rik (ENSMOCG00000022255) #22	Plch1 (ENSMOCG00000021300) #23	ENSMOCG00000013101	ENSMOCG00000013919	Mme (ENSMOCG00000019325) #25	Gpr149 (ENSMOCG00000021487) #26	Dhx36 (ENSMOCG00000006684) #27	ENSMOCG00000015894	Rap2b (ENSMOCG00000008675) #29	P2ry1 (ENSMOCG00000008589) #31	Mbnl1 (ENSMOCG00000016746) #33	Sucnr1 (ENSMOCG00000001555) #34	Aadac (ENSMOCG00000012125) #35	Aadacl2 (ENSMOCG00000010261) #36	ENSMOCG00000012366	Aadacl2fm3 (ENSMOCG00000018185)
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000010988	Shox2 (ENSPEMG00000024952) #9	Ptx3 (ENSPEMG00000029412) #12	Veph1 (ENSPEMG00000020957) #11	Ccnl1 (ENSPEMG00000000691) #13	ENSPEMG00000027465 #14	ENSPEMG00000016123	Tiparp (ENSPEMG00000014866) #16	Ssr3 (ENSPEMG00000008767) #17	Kcnab1 (ENSPEMG00000020802) #18	ENSPEMG00000003936	ENSPEMG00000005018 #19	Vmn2r1 (ENSPEMG00000000138) #19	Gmps (ENSPEMG00000009799) #20	Slc33a1 (ENSPEMG00000011599) #21	E130311K13Rik (ENSPEMG00000024310) #22	Plch1 (ENSPEMG00000003317) #23	Strit1 (ENSPEMG00000012153)	Mme (ENSPEMG00000018942) #25	Gpr149 (ENSPEMG00000008920) #26	ENSPEMG00000031240	Dhx36 (ENSPEMG00000010012) #27	Arhgef26 (ENSPEMG00000017934) #28	Rap2b (ENSPEMG00000001736) #29	P2ry1 (ENSPEMG00000016052) #31	ENSPEMG00000027344	ENSPEMG00000027982	ENSPEMG00000026946 #32	Mbnl1 (ENSPEMG00000011590) #33	Sucnr1 (ENSPEMG00000013535) #34	ENSPEMG00000005479 #35
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j.c.b #19	ENSGT00940000160473.j.c.a #19	ENSGT00940000160473.j.d #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT00860000136157	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b.c	ENSGT00940000163586.b.b
Mus	ANCESTRAL SPECIES	7	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j.c.a #19	ENSGT00940000160473.j.d.a #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00860000136157	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b.c	ENSGT00940000163586.b.b
Mus_A	ANCESTRAL SPECIES	9	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j.c.a #19	ENSGT00940000160473.j.d.a #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00860000136157	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b.c.a	ENSGT00940000163586.b.b
Ryukyu mouse	MODERN SPECIES	12	Mlf1 (MGP_CAROLIEiJ_G0025051)	Rsrc1 (MGP_CAROLIEiJ_G0025050)	Shox2 (MGP_CAROLIEiJ_G0025049) #9	Ptx3 (MGP_CAROLIEiJ_G0025048) #12	Veph1 (MGP_CAROLIEiJ_G0025047) #11	Ccnl1 (MGP_CAROLIEiJ_G0025046) #13	MGP_CAROLIEiJ_G0025045	Tiparp (MGP_CAROLIEiJ_G0025044) #16	Ssr3 (MGP_CAROLIEiJ_G0025043) #17	Kcnab1 (MGP_CAROLIEiJ_G0025042) #18	MGP_CAROLIEiJ_G0025041 #19	Vmn2r1 (MGP_CAROLIEiJ_G0025040) #19	MGP_CAROLIEiJ_G0025039 #19	Gmps (MGP_CAROLIEiJ_G0025038) #20	Slc33a1 (MGP_CAROLIEiJ_G0025037) #21	MGP_CAROLIEiJ_G0025036 #22	Plch1 (MGP_CAROLIEiJ_G0025035) #23	Mme (MGP_CAROLIEiJ_G0025034) #25	Gpr149 (MGP_CAROLIEiJ_G0025033) #26	Dhx36 (MGP_CAROLIEiJ_G0025032) #27	Arhgef26 (MGP_CAROLIEiJ_G0025031) #28	MGP_CAROLIEiJ_G0025030	Rap2b (MGP_CAROLIEiJ_G0025029) #29	P2ry1 (MGP_CAROLIEiJ_G0025028) #31	Mbnl1 (MGP_CAROLIEiJ_G0025027) #33	Sucnr1 (MGP_CAROLIEiJ_G0025026) #34	Aadac (MGP_CAROLIEiJ_G0025025) #35	Aadacl2 (MGP_CAROLIEiJ_G0025024) #36	Aadacl2fm1 (MGP_CAROLIEiJ_G0025023)	Aadacl2fm2 (MGP_CAROLIEiJ_G0025021)	Igsf10 (MGP_CAROLIEiJ_G0025020) #37
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j.d.a #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00860000136157	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b.c.a	ENSGT00940000163586.b.b
Mouse	MODERN SPECIES	12	Ccnl1 (ENSMUSG00000027829) #13	Lekr1 (ENSMUSG00000074579) #14	Tiparp (ENSMUSG00000034640) #16	Ssr3 (ENSMUSG00000027828) #17	Kcnab1 (ENSMUSG00000027827) #18	Vmn2r7 (ENSMUSG00000062200) #19	Vmn2r6 (ENSMUSG00000090581) #19	Vmn2r5 (ENSMUSG00000068999) #19	Vmn2r4 (ENSMUSG00000092049) #19	Vmn2r128 (ENSMUSG00000091967) #19	Vmn2r3 (ENSMUSG00000091572) #19	Vmn2r2 (ENSMUSG00000043897) #19	Vmn2r1 (ENSMUSG00000027824) #19	Gmps (ENSMUSG00000027823) #20	Slc33a1 (ENSMUSG00000027822) #21	E130311K13Rik (ENSMUSG00000048581) #22	Plch1 (ENSMUSG00000036834) #23	Strit1 (ENSMUSG00000103476)	Mme (ENSMUSG00000027820) #25	Gpr149 (ENSMUSG00000043441) #26	Dhx36 (ENSMUSG00000027770) #27	Arhgef26 (ENSMUSG00000036885) #28	Rap2b (ENSMUSG00000036894) #29	P2ry1 (ENSMUSG00000027765) #31	Mbnl1 (ENSMUSG00000027763) #33	Sucnr1 (ENSMUSG00000027762) #34	Aadac (ENSMUSG00000027761) #35	Aadacl2 (ENSMUSG00000091376) #36	Aadacl2fm1 (ENSMUSG00000036951)	Aadacl2fm3 (ENSMUSG00000095522)	Aadacl2fm2 (ENSMUSG00000090527)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473.j.d.a #19	ENSGT00940000160473.i #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00860000136157	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586.b.a.b.c.a	ENSGT00940000163586.b.b	ENSGT00940000163586.b.a.a.b
Steppe mouse	MODERN SPECIES	3174											Vmn2r3 (ENSMSIG00000029815) #19	ENSMSIG00000029810 #19	Vmn2r2 (ENSMSIG00000029806) #19	ENSMSIG00000029546 #20	Slc33a1 (ENSMSIG00000029527) #21	E130311K13Rik (ENSMSIG00000029523) #22	Plch1 (ENSMSIG00000029344) #23	ENSMSIG00000029333	Mme (ENSMSIG00000029325) #25	ENSMSIG00000029317	ENSMSIG00000029312	Gpr149 (ENSMSIG00000029310) #26	Dhx36 (ENSMSIG00000029300) #27	Arhgef26 (ENSMSIG00000029279) #28
spretus	MODERN SPECIES	12	Shox2 (MGP_SPRETEiJ_G0025991) #9	Ptx3 (MGP_SPRETEiJ_G0025990) #12	Veph1 (MGP_SPRETEiJ_G0025989) #11	Ccnl1 (MGP_SPRETEiJ_G0025988) #13	MGP_SPRETEiJ_G0025987	Tiparp (MGP_SPRETEiJ_G0025986) #16	Ssr3 (MGP_SPRETEiJ_G0025985) #17	Kcnab1 (MGP_SPRETEiJ_G0025984) #18	MGP_SPRETEiJ_G0025983 #19	MGP_SPRETEiJ_G0025982 #19	MGP_SPRETEiJ_G0025981 #19	MGP_SPRETEiJ_G0025980 #19	MGP_SPRETEiJ_G0025979 #19	MGP_SPRETEiJ_G0025978 #20	Slc33a1 (MGP_SPRETEiJ_G0025977) #21	E130311K13Rik (MGP_SPRETEiJ_G0025976) #22	Plch1 (MGP_SPRETEiJ_G0025975) #23	Mme (MGP_SPRETEiJ_G0025974) #25	Gpr149 (MGP_SPRETEiJ_G0025973) #26	Dhx36 (MGP_SPRETEiJ_G0025972) #27	Arhgef26 (MGP_SPRETEiJ_G0025971) #28	MGP_SPRETEiJ_G0025970	Rap2b (MGP_SPRETEiJ_G0025969) #29	P2ry1 (MGP_SPRETEiJ_G0025968) #31	Mbnl1 (MGP_SPRETEiJ_G0025967) #33	Sucnr1 (MGP_SPRETEiJ_G0025966) #34	Aadac (MGP_SPRETEiJ_G0025965) #35	Aadacl2 (MGP_SPRETEiJ_G0025964) #36	Aadacl2fm1 (MGP_SPRETEiJ_G0025963)	MGP_SPRETEiJ_G0025961	MGP_SPRETEiJ_G0025960 #37
Shrew mouse	MODERN SPECIES	17	Gfm1 (MGP_PahariEiJ_G0026495)	Mlf1 (MGP_PahariEiJ_G0026494)	Rsrc1 (MGP_PahariEiJ_G0026493)	Shox2 (MGP_PahariEiJ_G0026492) #9	Ptx3 (MGP_PahariEiJ_G0026491) #12	Veph1 (MGP_PahariEiJ_G0026490) #11	Ccnl1 (MGP_PahariEiJ_G0026489) #13	MGP_PahariEiJ_G0026488	Tiparp (MGP_PahariEiJ_G0026487) #16	Ssr3 (MGP_PahariEiJ_G0026486) #17	Kcnab1 (MGP_PahariEiJ_G0026485) #18	MGP_PahariEiJ_G0026484 #19	Vmn2r1 (MGP_PahariEiJ_G0026483) #19	Gmps (MGP_PahariEiJ_G0026482) #20	Slc33a1 (MGP_PahariEiJ_G0026481) #21	E130311K13Rik (MGP_PahariEiJ_G0026480) #22	Plch1 (MGP_PahariEiJ_G0026479) #23	Mme (MGP_PahariEiJ_G0026478) #25	Gpr149 (MGP_PahariEiJ_G0026477) #26	Dhx36 (MGP_PahariEiJ_G0026476) #27	Arhgef26 (MGP_PahariEiJ_G0026475) #28	MGP_PahariEiJ_G0026474	Rap2b (MGP_PahariEiJ_G0026473) #29	P2ry1 (MGP_PahariEiJ_G0026472) #31	Mbnl1 (MGP_PahariEiJ_G0026471) #33	Sucnr1 (MGP_PahariEiJ_G0026470) #34	Aadac (MGP_PahariEiJ_G0026469) #35	MGP_PahariEiJ_G0026468 #36	Aadacl2fm1 (MGP_PahariEiJ_G0026467)	MGP_PahariEiJ_G0026465	Igsf10 (MGP_PahariEiJ_G0026464) #37
Rat	MODERN SPECIES	11	Veph1 (ENSRNOG00000012427) #11	Ccnl1 (ENSRNOG00000011586) #13	Lekr1 (ENSRNOG00000031247) #14	Tiparp (ENSRNOG00000011238) #16	Ssr3 (ENSRNOG00000011148) #17	Kcnab1 (ENSRNOG00000056697) #18	Vom2r47 (ENSRNOG00000028345) #19	AABR07010333.1 (ENSRNOG00000031248)	LOC120100835 (ENSRNOG00000066617) #19	ENSRNOG00000064787	Vom2r46 (ENSRNOG00000068452) #19	Vom2r45 (ENSRNOG00000064237) #19	Vom2r44 (ENSRNOG00000030104) #19	Gmps (ENSRNOG00000051151) #20	Slc33a1 (ENSRNOG00000010023) #21	C2h3orf33 (ENSRNOG00000021324) #22	Plch1 (ENSRNOG00000009955) #23	Strit1 (ENSRNOG00000066453)	Mme (ENSRNOG00000009514) #25	Gpr149 (ENSRNOG00000014793) #26	Dhx36 (ENSRNOG00000014599) #27	Arhgef26 (ENSRNOG00000014549) #28	ENSRNOG00000066767	Rap2b (ENSRNOG00000065432) #29	AABR07010787.1 (ENSRNOG00000053939)	P2ry1 (ENSRNOG00000014232) #31	Mbnl1 (ENSRNOG00000014076) #33	ENSRNOG00000065517	Sucnr1 (ENSRNOG00000014039) #34	Aadac (ENSRNOG00000013950) #35	RGD1560162 (ENSRNOG00000038008)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1112														Gmps (ENSNGAG00000019127) #20	Slc33a1 (ENSNGAG00000017451) #21	E130311K13Rik (ENSNGAG00000015579) #22	ENSNGAG00000004094	Plch1 (ENSNGAG00000000313) #23	ENSNGAG00000020116 #24	ENSNGAG00000019113 #25	Gpr149 (ENSNGAG00000014103) #26	Dhx36 (ENSNGAG00000015307) #27	Arhgef26 (ENSNGAG00000008817) #28
Lesser Egyptian jerboa	MODERN SPECIES	47												ENSJJAG00000022420 #19	ENSJJAG00000019470 #19	Gmps (ENSJJAG00000023127) #20	Slc33a1 (ENSJJAG00000003795) #21	E130311K13Rik (ENSJJAG00000013831) #22	Il9r (ENSJJAG00000010972)	Polr3k (ENSJJAG00000022791)	ENSJJAG00000021564	Rhbdf1 (ENSJJAG00000007873)	Mpg (ENSJJAG00000020414)	Nprl3 (ENSJJAG00000010629)	Hba-x (ENSJJAG00000010184)	ENSJJAG00000023100	ENSJJAG00000011884	ENSJJAG00000015959	Luc7l (ENSJJAG00000002974)	Fam234a (ENSJJAG00000021311)	Rgs11 (ENSJJAG00000012965)	Arhgdig (ENSJJAG00000023913)	Pdia2 (ENSJJAG00000021893)
Kangaroo rat	MODERN SPECIES	349	Gfm1 (ENSDORG00000014165)	Mlf1 (ENSDORG00000014164)	ENSDORG00000014162	Shox2 (ENSDORG00000006033) #9	Ptx3 (ENSDORG00000014563) #12	Veph1 (ENSDORG00000014560) #11	Ccnl1 (ENSDORG00000008224) #13	ENSDORG00000023530	Tiparp (ENSDORG00000013554) #16	ENSDORG00000024089 #17	Kcnab1 (ENSDORG00000000796) #18	ENSDORG00000029512 #19	ENSDORG00000001855 #19	Gmps (ENSDORG00000014996) #20	Slc33a1 (ENSDORG00000013954) #21	E130311K13Rik (ENSDORG00000023719) #22	Plch1 (ENSDORG00000009727) #23	Mme (ENSDORG00000005785) #25	Dhx36 (ENSDORG00000004848) #27	Arhgef26 (ENSDORG00000004847) #28	P2ry1 (ENSDORG00000000159) #31	Mbnl1 (ENSDORG00000029896) #33	Sucnr1 (ENSDORG00000027346) #34
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37
Sciuridae	ANCESTRAL SPECIES	26	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000163586	ENSGT00940000158290 #37	ENSGT01060000248592.E
Marmotini	ANCESTRAL SPECIES	25	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000163586	ENSGT00940000158290 #37
Alpin marmot	MODERN SPECIES	19	RSRC1 (ENSMMMG00000016000)	ENSMMMG00000015978 #12	VEPH1 (ENSMMMG00000015959) #11	ENSMMMG00000015953	CCNL1 (ENSMMMG00000015946) #13	ENSMMMG00000015936 #14	ENSMMMG00000015928	TIPARP (ENSMMMG00000015913) #16	ENSMMMG00000015911	SSR3 (ENSMMMG00000015908) #17	KCNAB1 (ENSMMMG00000015897) #18	ENSMMMG00000015856 #19	GMPS (ENSMMMG00000015827) #20	ENSMMMG00000015821	SLC33A1 (ENSMMMG00000015806) #21	C3orf33 (ENSMMMG00000015801) #22	PLCH1 (ENSMMMG00000015750) #23	ENSMMMG00000015745	ENSMMMG00000015738	MME (ENSMMMG00000015658) #25	GPR149 (ENSMMMG00000015632) #26	ENSMMMG00000015607 #27	ARHGEF26 (ENSMMMG00000015536) #28	RAP2B (ENSMMMG00000015534) #29	P2RY1 (ENSMMMG00000015529) #31	ENSMMMG00000015517 #32	MBNL1 (ENSMMMG00000015300) #33	SUCNR1 (ENSMMMG00000015288) #34	AADAC (ENSMMMG00000015181) #35	ENSMMMG00000015169	IGSF10 (ENSMMMG00000015152) #37
Marmotini_b	ANCESTRAL SPECIES	46	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01100000265011	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000163586	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Arctic ground squirrel	MODERN SPECIES	111	MLF1 (ENSUPAG00010007820)	RSRC1 (ENSUPAG00010007492)	SHOX2 (ENSUPAG00010007482) #9	PTX3 (ENSUPAG00010007477) #12	VEPH1 (ENSUPAG00010007462) #11	CCNL1 (ENSUPAG00010007457) #13	LEKR1 (ENSUPAG00010007452) #14	ENSUPAG00010007447	TIPARP (ENSUPAG00010007433) #16	ENSUPAG00010007423	SSR3 (ENSUPAG00010007397) #17	KCNAB1 (ENSUPAG00010007381) #18	ENSUPAG00010007272 #19	GMPS (ENSUPAG00010007230) #20	SLC33A1 (ENSUPAG00010007214) #21	C3orf33 (ENSUPAG00010007194) #22	ENSUPAG00010007178	PLCH1 (ENSUPAG00010006835) #23	ENSUPAG00010006817	MME (ENSUPAG00010006795) #25	GPR149 (ENSUPAG00010006785) #26	DHX36 (ENSUPAG00010006741) #27	ARHGEF26 (ENSUPAG00010006714) #28	RAP2B (ENSUPAG00010006710) #29	P2RY1 (ENSUPAG00010006704) #31
Squirrel	MODERN SPECIES	119	MLF1 (ENSSTOG00000010142)	ENSSTOG00000004812	RSRC1 (ENSSTOG00000021591)	SHOX2 (ENSSTOG00000010121) #9	PTX3 (ENSSTOG00000023681) #12	VEPH1 (ENSSTOG00000014695) #11	CCNL1 (ENSSTOG00000011805) #13	LEKR1 (ENSSTOG00000026813) #14	ENSSTOG00000031297	TIPARP (ENSSTOG00000027682) #16	SSR3 (ENSSTOG00000013773) #17	KCNAB1 (ENSSTOG00000025723) #18	ENSSTOG00000011094 #19	GMPS (ENSSTOG00000026541) #20	SLC33A1 (ENSSTOG00000000095) #21	C3orf33 (ENSSTOG00000027383) #22	PLCH1 (ENSSTOG00000000090) #23	ENSSTOG00000030767	MME (ENSSTOG00000000081) #25	GPR149 (ENSSTOG00000003946) #26	DHX36 (ENSSTOG00000003917) #27	ARHGEF26 (ENSSTOG00000021966) #28	RAP2B (ENSSTOG00000029014) #29	P2RY1 (ENSSTOG00000005370) #31	MBNL1 (ENSSTOG00000026711) #33	SUCNR1 (ENSSTOG00000015405) #34
Eurasian red squirrel	MODERN SPECIES	1	LXN (ENSSVLG00005004800)	MLF1 (ENSSVLG00005004886)	RSRC1 (ENSSVLG00005005040)	SHOX2 (ENSSVLG00005005099) #9	VEPH1 (ENSSVLG00005005203) #11	PTX3 (ENSSVLG00005005353) #12	ENSSVLG00005005378	CCNL1 (ENSSVLG00005005434) #13	LEKR1 (ENSSVLG00005005558) #14	TIPARP (ENSSVLG00005005579) #16	ENSSVLG00005005598 #17	KCNAB1 (ENSSVLG00005005761) #18	ENSSVLG00005006157 #19	GMPS (ENSSVLG00005006221) #20	SLC33A1 (ENSSVLG00005006332) #21	C3orf33 (ENSSVLG00005006407) #22	ENSSVLG00005006455	PLCH1 (ENSSVLG00005006514) #23	STRIT1 (ENSSVLG00005006829) #24	MME (ENSSVLG00005006865) #25	ENSSVLG00005006949	GPR149 (ENSSVLG00005006960) #26	DHX36 (ENSSVLG00005007041) #27	ARHGEF26 (ENSSVLG00005007133) #28	RAP2B (ENSSVLG00005007246) #29	P2RY1 (ENSSVLG00005007265) #31	ENSSVLG00005007281	MBNL1 (ENSSVLG00005007413) #33	SUCNR1 (ENSSVLG00005007593) #34	AADAC (ENSSVLG00005007632) #35	IGSF10 (ENSSVLG00005007686) #37
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.u.a #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37	ENSGT01060000248592.E
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	28	ENSHGLG00000007708	ENSHGLG00000048329	ENSHGLG00000003049	OSBPL10 (ENSHGLG00000003154)	GPD1L (ENSHGLG00000046132)	ENSHGLG00000035456	ENSHGLG00000047272	ENSHGLG00000037369	CMTM8 (ENSHGLG00000003541)	CMTM7 (ENSHGLG00000001487)	ENSHGLG00000034894	ENSHGLG00000001574	ENSHGLG00000001731	ENSHGLG00000019891	ENSHGLG00000039776	ENSHGLG00000047516 #22	ENSHGLG00000001826	ENSHGLG00000002090	GLB1 (ENSHGLG00000002150)	ENSHGLG00000002496	ENSHGLG00000037229	CRTAP (ENSHGLG00000002614)	SUSD5 (ENSHGLG00000040528)	ENSHGLG00000037082	ENSHGLG00000002747	FBXL2 (ENSHGLG00000002144)	UBP1 (ENSHGLG00000002333)	ENSHGLG00000003013	PDCD6IP (ENSHGLG00000004033)	ENSHGLG00000001187	ENSHGLG00000040644
Naked mole-rat female	MODERN SPECIES	27	PTX3 (ENSHGLG00000012461) #12	ENSHGLG00000045178	ENSHGLG00000012347	ENSHGLG00000011933 #13	ENSHGLG00000011740	ENSHGLG00000045711	ENSHGLG00000034810	ENSHGLG00000010960 #16	ENSHGLG00000020605	SSR3 (ENSHGLG00000037144) #17	KCNAB1 (ENSHGLG00000019332) #18	ENSHGLG00000039018	ENSHGLG00000019405 #19	ENSHGLG00000019482 #20	SLC33A1 (ENSHGLG00000042989) #21	ENSHGLG00000019192 #22	PLCH1 (ENSHGLG00000017434) #23	ENSHGLG00000035877	MME (ENSHGLG00000013970) #25	ENSHGLG00000041038	ENSHGLG00000039740	ENSHGLG00000049890	ENSHGLG00000042929	GPR149 (ENSHGLG00000013607) #26	DHX36 (ENSHGLG00000017407) #27	ARHGEF26 (ENSHGLG00000017391)	RAP2B (ENSHGLG00000032240) #29	ENSHGLG00000013739	P2RY1 (ENSHGLG00000012962) #31	MBNL1 (ENSHGLG00000012911) #33	ENSHGLG00000032291
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.u.a #35	ENSGT00940000161405 #36	ENSGT00940000163586	ENSGT00940000158290 #37	ENSGT01060000248592.E
Hystricomorpha_b	ANCESTRAL SPECIES	9	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.u.a #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Long-tailed chinchilla	MODERN SPECIES	155	GFM1 (ENSCLAG00000002503)	MLF1 (ENSCLAG00000002260)	RSRC1 (ENSCLAG00000003542)	SHOX2 (ENSCLAG00000003167) #9	PTX3 (ENSCLAG00000003570) #12	VEPH1 (ENSCLAG00000003443) #11	ENSCLAG00000002842 #13	ENSCLAG00000002747 #14	ENSCLAG00000002596	TIPARP (ENSCLAG00000002423) #16	SSR3 (ENSCLAG00000002284) #17	KCNAB1 (ENSCLAG00000012692) #18	ENSCLAG00000012602 #19	GMPS (ENSCLAG00000007499) #20	SLC33A1 (ENSCLAG00000007266) #21	C3orf33 (ENSCLAG00000004358) #22	PLCH1 (ENSCLAG00000002471) #23	ENSCLAG00000002045	MME (ENSCLAG00000001839) #25	GPR149 (ENSCLAG00000004034) #26	DHX36 (ENSCLAG00000003610) #27	ARHGEF26 (ENSCLAG00000003300) #28	RAP2B (ENSCLAG00000003050) #29	P2RY1 (ENSCLAG00000003012) #31	MBNL1 (ENSCLAG00000002450) #33	SUCNR1 (ENSCLAG00000002102) #34	ENSCLAG00000002033 #35	ENSCLAG00000001891 #35	AADACL2 (ENSCLAG00000001836) #36	IGSF10 (ENSCLAG00000001781) #37	P2RY12 (ENSCLAG00000002335)
Guinea pig	MODERN SPECIES	8	GFM1 (ENSCPOG00000001194)	MLF1 (ENSCPOG00000000426)	RSRC1 (ENSCPOG00000000876)	SHOX2 (ENSCPOG00000038435) #9	PTX3 (ENSCPOG00000037636) #12	VEPH1 (ENSCPOG00000010480) #11	ENSCPOG00000031670 #13	ENSCPOG00000025111	TIPARP (ENSCPOG00000000345) #16	SSR3 (ENSCPOG00000037065) #17	KCNAB1 (ENSCPOG00000004890) #18	ENSCPOG00000033396	ENSCPOG00000011335 #19	GMPS (ENSCPOG00000011574) #20	SLC33A1 (ENSCPOG00000005212) #21	C3orf33 (ENSCPOG00000035789) #22	ENSCPOG00000040284	PLCH1 (ENSCPOG00000004751) #23	STRIT1 (ENSCPOG00000037602) #24	MME (ENSCPOG00000007994) #25	ENSCPOG00000022096	GPR149 (ENSCPOG00000009609) #26	DHX36 (ENSCPOG00000007716) #27	ARHGEF26 (ENSCPOG00000007710) #28	RAP2B (ENSCPOG00000012843) #29	P2RY1 (ENSCPOG00000015545) #31	MBNL1 (ENSCPOG00000040271) #33	SUCNR1 (ENSCPOG00000036828) #34	AADAC (ENSCPOG00000004154) #35	AADACL2 (ENSCPOG00000030571) #36	ENSCPOG00000014355
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000167272	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000004493 #22
Hedgehog	MODERN SPECIES	6975																C3orf33 (ENSEEUG00000003750) #22
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000167272	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Suina	ANCESTRAL SPECIES	1	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Chacoan peccary	MODERN SPECIES	944	RARRES1 (ENSCWAG00000005368)	LXN (ENSCWAG00000005330)	GFM1 (ENSCWAG00000005248)	MLF1 (ENSCWAG00000004549)	RSRC1 (ENSCWAG00000004465)	SHOX2 (ENSCWAG00000021164) #9	PTX3 (ENSCWAG00000021153) #12	VEPH1 (ENSCWAG00000021141) #11	CCNL1 (ENSCWAG00000021119) #13	LEKR1 (ENSCWAG00000021096) #14	TIPARP (ENSCWAG00000021084) #16	SSR3 (ENSCWAG00000021071) #17	KCNAB1 (ENSCWAG00000020534) #18	GMPS (ENSCWAG00000020402) #20	SLC33A1 (ENSCWAG00000020377) #21	C3orf33 (ENSCWAG00000020351) #22	PLCH1 (ENSCWAG00000019684) #23	ENSCWAG00000019615	STRIT1 (ENSCWAG00000019605) #24	MME (ENSCWAG00000019525) #25	GPR149 (ENSCWAG00000019481) #26	DHX36 (ENSCWAG00000019200) #27	ARHGEF26 (ENSCWAG00000019051) #28	RAP2B (ENSCWAG00000019034) #29	P2RY1 (ENSCWAG00000019026) #31	MBNL1 (ENSCWAG00000018748) #33	ENSCWAG00000018680	SUCNR1 (ENSCWAG00000018665) #34	ENSCWAG00000018616 #35	ENSCWAG00000018587 #35	ENSCWAG00000018577
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Camelidae	ANCESTRAL SPECIES		ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000167272	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Arabian camel	MODERN SPECIES		LXN (ENSCDRG00005002303)	GFM1 (ENSCDRG00005002271)	MLF1 (ENSCDRG00005002182)	RSRC1 (ENSCDRG00005002140)	SHOX2 (ENSCDRG00005002041) #9	ENSCDRG00005002025	PTX3 (ENSCDRG00005002009) #12	VEPH1 (ENSCDRG00005001946) #11	CCNL1 (ENSCDRG00005001866) #13	LEKR1 (ENSCDRG00005001799) #14	TIPARP (ENSCDRG00005001771) #16	SSR3 (ENSCDRG00005001758) #17	KCNAB1 (ENSCDRG00005000711) #18	GMPS (ENSCDRG00005000518) #20	SLC33A1 (ENSCDRG00005000479) #21	C3orf33 (ENSCDRG00005000461) #22	PLCH1 (ENSCDRG00005000373) #23	STRIT1 (ENSCDRG00005000324) #24	MME (ENSCDRG00005000270) #25	GPR149 (ENSCDRG00005000230) #26	DHX36 (ENSCDRG00005000096) #27	ARHGEF26 (ENSCDRG00005000067) #28	RAP2B (ENSCDRG00005000053) #29	P2RY1 (ENSCDRG00005000045) #31	MBNL1 (ENSCDRG00005000024) #33	SUCNR1 (ENSCDRG00005000008) #34	AADAC (ENSCDRG00005000004) #35	ENSCDRG00005016968	AADACL2 (ENSCDRG00005016866) #36	ENSCDRG00005016844	IGSF10 (ENSCDRG00005016817) #37
Alpaca	MODERN SPECIES	2603										TIPARP (ENSVPAG00000008484) #16	SSR3 (ENSVPAG00000008483) #17	KCNAB1 (ENSVPAG00000008482) #18	ENSVPAG00000008480 #19	GMPS (ENSVPAG00000008478) #20	SLC33A1 (ENSVPAG00000008477) #21	C3orf33 (ENSVPAG00000008476) #22	PLCH1 (ENSVPAG00000008474) #23	MME (ENSVPAG00000008471) #25
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000167272	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b.f #17	ENSGT00940000154586.g.a	ENSGT00940000156760 #18	ENSGT00730000111029.h	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000158290 #37	ENSGT01060000248592.E
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000165902	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b.f #17	ENSGT00940000154586.g.a	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000165902	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b.f #17	ENSGT00940000154586.g.a	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000165902	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b.f #17	ENSGT00940000154586.g.a	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Monodontidae	ANCESTRAL SPECIES	23	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b.f #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000172218	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00550000075103.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000153096.b.c.b.a.a.a.b.a.a	ENSGT00940000158290 #37	ENSGT01060000248592.E
Narwhal	MODERN SPECIES	297	ENSMMNG00015001295	GFM1 (ENSMMNG00015001384)	MLF1 (ENSMMNG00015001539)	RSRC1 (ENSMMNG00015001723)	SHOX2 (ENSMMNG00015001781) #9	VEPH1 (ENSMMNG00015001888) #11	PTX3 (ENSMMNG00015001964) #12	CCNL1 (ENSMMNG00015002007) #13	LEKR1 (ENSMMNG00015002068) #14	TIPARP (ENSMMNG00015002122) #16	ENSMMNG00015002141 #17	KCNAB1 (ENSMMNG00015002282) #18	ENSMMNG00015002576	GMPS (ENSMMNG00015002623) #20	SLC33A1 (ENSMMNG00015002672) #21	C3orf33 (ENSMMNG00015002700) #22	PLCH1 (ENSMMNG00015002782) #23	ENSMMNG00015002948	ENSMMNG00015002967	STRIT1 (ENSMMNG00015002983) #24	MME (ENSMMNG00015003033) #25	ENSMMNG00015003103	GPR149 (ENSMMNG00015003118) #26	DHX36 (ENSMMNG00015003153) #27	ARHGEF26 (ENSMMNG00015003214) #28	RAP2B (ENSMMNG00015003241) #29	P2RY1 (ENSMMNG00015003258) #31	MBNL1 (ENSMMNG00015003348) #33	SUCNR1 (ENSMMNG00015003482) #34	ENSMMNG00015003497	IGSF10 (ENSMMNG00015003512) #37
Vaquita	MODERN SPECIES	15	RSRC1 (ENSPSNG00000000561)	SHOX2 (ENSPSNG00000000501) #9	ENSPSNG00000000457	PTX3 (ENSPSNG00000000445) #12	VEPH1 (ENSPSNG00000000364) #11	CCNL1 (ENSPSNG00000000286) #13	ENSPSNG00000000259	LEKR1 (ENSPSNG00000000223) #14	TIPARP (ENSPSNG00000000170) #16	SSR3 (ENSPSNG00000000147) #17	ENSPSNG00000000110	KCNAB1 (ENSPSNG00000019449) #18	ENSPSNG00000019296 #19	GMPS (ENSPSNG00000019139) #20	SLC33A1 (ENSPSNG00000019036) #21	C3orf33 (ENSPSNG00000018983) #22	ENSPSNG00000018941	PLCH1 (ENSPSNG00000018233) #23	STRIT1 (ENSPSNG00000018071) #24	MME (ENSPSNG00000018017) #25	ENSPSNG00000017990	ENSPSNG00000017948	GPR149 (ENSPSNG00000017896) #26	DHX36 (ENSPSNG00000017807) #27	ARHGEF26 (ENSPSNG00000017750) #28	RAP2B (ENSPSNG00000017713) #29	P2RY1 (ENSPSNG00000017690) #31	MBNL1 (ENSPSNG00000017290) #33	SUCNR1 (ENSPSNG00000017164) #34	ENSPSNG00000017111	IGSF10 (ENSPSNG00000017040) #37
Dolphin	MODERN SPECIES	3523													ENSTTRG00000014797 #19	GMPS (ENSTTRG00000014796) #20	SLC33A1 (ENSTTRG00000014795) #21	CUNH3orf33 (ENSTTRG00000014794) #22	PLCH1 (ENSTTRG00000014793) #23
Sperm whale	MODERN SPECIES		SHOX2 (ENSPCTG00005003800) #9	ENSPCTG00005003773	PTX3 (ENSPCTG00005003765) #12	VEPH1 (ENSPCTG00005003733) #11	CCNL1 (ENSPCTG00005003663) #13	ENSPCTG00005003638	LEKR1 (ENSPCTG00005003617) #14	TIPARP (ENSPCTG00005003592) #16	SSR3 (ENSPCTG00005003579) #17	ENSPCTG00005003569	KCNAB1 (ENSPCTG00005003144) #18	ENSPCTG00005003068	ENSPCTG00005003035 #19	GMPS (ENSPCTG00005003000) #20	SLC33A1 (ENSPCTG00005002962) #21	C1H3orf33 (ENSPCTG00005002945) #22	ENSPCTG00005002938	PLCH1 (ENSPCTG00005002793) #23	ENSPCTG00005002721	ENSPCTG00005002714	LRRC3B (ENSPCTG00005002693)	OXSM (ENSPCTG00005002681)	NGLY1 (ENSPCTG00005002617)	TOP2B (ENSPCTG00005002467)	RARB (ENSPCTG00005002435)	ENSPCTG00005002423	ENSPCTG00005002407	THRB (ENSPCTG00005002356)	NR1D2 (ENSPCTG00005002323)	ENSPCTG00005002311	NKIRAS1 (ENSPCTG00005002302)
Blue whale	MODERN SPECIES	15	RSRC1 (ENSBMSG00010003618)	SHOX2 (ENSBMSG00010003594) #9	ENSBMSG00010003577	PTX3 (ENSBMSG00010003568) #12	VEPH1 (ENSBMSG00010003516) #11	CCNL1 (ENSBMSG00010003451) #13	LEKR1 (ENSBMSG00010003429) #14	TIPARP (ENSBMSG00010003410) #16	ENSBMSG00010003398 #17	ENSBMSG00010003383	KCNAB1 (ENSBMSG00010003309) #18	ENSBMSG00010003257	ENSBMSG00010003213 #19	GMPS (ENSBMSG00010003175) #20	SLC33A1 (ENSBMSG00010003142) #21	C3orf33 (ENSBMSG00010003125) #22	ENSBMSG00010003115	PLCH1 (ENSBMSG00010002496) #23	STRIT1 (ENSBMSG00010002387) #24	MME (ENSBMSG00010002306) #25	ENSBMSG00010002280	ENSBMSG00010002266	GPR149 (ENSBMSG00010002240) #26	DHX36 (ENSBMSG00010002188) #27	ARHGEF26 (ENSBMSG00010002131) #28	ENSBMSG00010002101	RAP2B (ENSBMSG00010002082) #29	P2RY1 (ENSBMSG00010002069) #31	ENSBMSG00010002061 #32	MBNL1 (ENSBMSG00010001872) #33	ENSBMSG00010001822
Pecora	ANCESTRAL SPECIES	8	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.o.b #35	ENSGT00940000155975.o.a #35	ENSGT00940000161405.g #36	ENSGT00940000155975.p #35
Percora_a	ANCESTRAL SPECIES	7	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.o.b #35	ENSGT00940000155975.o.a #35	ENSGT00940000155975.p #35	ENSGT00940000161405.g #36
Bovidae	ANCESTRAL SPECIES	9	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.o.b #35	ENSGT00940000155975.o.a #35	ENSGT00940000155975.p #35
Caprinae	ANCESTRAL SPECIES	8	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000155368 #16	ENSGT00390000000970.b.g #17	ENSGT00940000156760 #18	ENSGT00950000182995.e.a.a.a.fb.a.b	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00900000143541 #32	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.o.a #35	ENSGT00940000155975.p #35	ENSGT00940000161405.g #36
Rambouillet Sheep	MODERN SPECIES		LXN (ENSOARG00020000302)	MLF1 (ENSOARG00020000362)	RSRC1 (ENSOARG00020000715)	SHOX2 (ENSOARG00020000755) #9	VEPH1 (ENSOARG00020000860) #11	PTX3 (ENSOARG00020000946) #12	CCNL1 (ENSOARG00020000976) #13	LEKR1 (ENSOARG00020001026) #14	ENSOARG00020001059	TIPARP (ENSOARG00020001069) #16	SSR3 (ENSOARG00020001079) #17	KCNAB1 (ENSOARG00020001172) #18	ENSOARG00020001823	GMPS (ENSOARG00020001873) #20	SLC33A1 (ENSOARG00020002067) #21	C3orf33 (ENSOARG00020002111) #22	PLCH1 (ENSOARG00020002177) #23	STRIT1 (ENSOARG00020002364) #24	MME (ENSOARG00020002391) #25	GPR149 (ENSOARG00020002480) #26	DHX36 (ENSOARG00020002569) #27	ARHGEF26 (ENSOARG00020002906) #28	ENSOARG00020002971	RAP2B (ENSOARG00020002980) #29	P2RY1 (ENSOARG00020002995) #31	MBNL1 (ENSOARG00020003112) #33	ENSOARG00020003630	ENSOARG00020003641 #35	ENSOARG00020003670 #35	ENSOARG00020003743	ENSOARG00020003749
Goat	MODERN SPECIES		MLF1 (ENSCHIG00000018923)	ENSCHIG00000011968	SHOX2 (ENSCHIG00000016128) #9	VEPH1 (ENSCHIG00000027071) #11	PTX3 (ENSCHIG00000012523) #12	CCNL1 (ENSCHIG00000015405) #13	ENSCHIG00000010147 #14	ENSCHIG00000023809	TIPARP (ENSCHIG00000018721) #16	SSR3 (ENSCHIG00000012338) #17	KCNAB1 (ENSCHIG00000023684) #18	ENSCHIG00000025482	ENSCHIG00000020039	GMPS (ENSCHIG00000022844) #20	SLC33A1 (ENSCHIG00000013645) #21	C3orf33 (ENSCHIG00000025795) #22	ENSCHIG00000011194	PLCH1 (ENSCHIG00000024716) #23	MME (ENSCHIG00000018324) #25	ENSCHIG00000017243	GPR149 (ENSCHIG00000005003) #26	DHX36 (ENSCHIG00000017463) #27	ARHGEF26 (ENSCHIG00000012613) #28	ENSCHIG00000025851	RAP2B (ENSCHIG00000011695) #29	P2RY1 (ENSCHIG00000008918) #31	ENSCHIG00000019221 #32	MBNL1 (ENSCHIG00000019308) #33	ENSCHIG00000024419	SUCNR1 (ENSCHIG00000008127) #34	ENSCHIG00000020191 #35
Bovinae	ANCESTRAL SPECIES	6	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000013771.f.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.o.b #35	ENSGT00940000155975.o.a #35	ENSGT00940000155975.p #35
Bos	ANCESTRAL SPECIES	7	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01080000259023	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000013771.f.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00390000009588.pb.a.a.a	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.o.b #35
Bos_b	ANCESTRAL SPECIES	5	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01080000259023	ENSGT00940000156745 #25	ENSGT00390000013771.f.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT00940000163420	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00390000009588.pb.a.a.a	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.o.b #35	ENSGT00940000155975.o.a #35
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005012116	SHOX2 (ENSBIXG00005012090) #9	VEPH1 (ENSBIXG00005011960) #11	PTX3 (ENSBIXG00005011820) #12	ENSBIXG00005011803	CCNL1 (ENSBIXG00005011760) #13	LEKR1 (ENSBIXG00005011662) #14	TIPARP (ENSBIXG00005011554) #16	ENSBIXG00005001118	SSR3 (ENSBIXG00005001116) #17	KCNAB1 (ENSBIXG00005011415) #18	ENSBIXG00005011267	GMPS (ENSBIXG00005011224) #20	ENSBIXG00005011169	SLC33A1 (ENSBIXG00005011151) #21	C3orf33 (ENSBIXG00005001018) #22	PLCH1 (ENSBIXG00005011013) #23	ENSBIXG00005010857	MME (ENSBIXG00005010777) #25	ENSBIXG00005010519	GPR149 (ENSBIXG00005010478) #26	DHX36 (ENSBIXG00005010428) #27	ENSBIXG00005010192	ENSBIXG00005010090	RAP2B (ENSBIXG00005000777) #29	ENSBIXG00005010071	P2RY1 (ENSBIXG00005010036) #31	ENSBIXG00005009997	MBNL1 (ENSBIXG00005009946) #33	SUCNR1 (ENSBIXG00005006769) #34	ENSBIXG00005009787 #35
Cow	MODERN SPECIES		GFM1 (ENSBTAG00000027795)	LXN (ENSBTAG00000009336)	MLF1 (ENSBTAG00000004126)	RSRC1 (ENSBTAG00000031561)	SHOX2 (ENSBTAG00000005230) #9	VEPH1 (ENSBTAG00000024643) #11	PTX3 (ENSBTAG00000009012) #12	CCNL1 (ENSBTAG00000003851) #13	ENSBTAG00000018009 #14	ENSBTAG00000050129	TIPARP (ENSBTAG00000012120) #16	SSR3 (ENSBTAG00000018471) #17	KCNAB1 (ENSBTAG00000018465) #18	GMPS (ENSBTAG00000013013) #20	SLC33A1 (ENSBTAG00000014318) #21	C1H3orf33 (ENSBTAG00000005203) #22	PLCH1 (ENSBTAG00000008307) #23	MME (ENSBTAG00000002075) #25	ENSBTAG00000024623	GPR149 (ENSBTAG00000006147) #26	DHX36 (ENSBTAG00000006142) #27	ARHGEF26 (ENSBTAG00000013439)	ENSBTAG00000047341	RAP2B (ENSBTAG00000055257) #29	P2RY1 (ENSBTAG00000001465) #31	ENSBTAG00000033740	MBNL1 (ENSBTAG00000004564) #33	SUCNR1 (ENSBTAG00000053581) #34	ENSBTAG00000049884 #35	AADAC (ENSBTAG00000011569) #35	ENSBTAG00000050308 #35
Bos_a	ANCESTRAL SPECIES	5	ENSGT00530000063813.a	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01080000259023	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000013771.f.a.b	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00710000106792.p	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00390000009588.pb.a.a.a	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.o.b #35
Wild yak	MODERN SPECIES	821												SSR3 (ENSBMUG00000006226) #17	KCNAB1 (ENSBMUG00000006586) #18	GMPS (ENSBMUG00000006738) #20	SLC33A1 (ENSBMUG00000006768) #21	C3orf33 (ENSBMUG00000006782) #22	PLCH1 (ENSBMUG00000006875) #23	ENSBMUG00000006966
Domestic yak	MODERN SPECIES		RSRC1 (ENSBGRG00000015425)	ENSBGRG00000015623	SHOX2 (ENSBGRG00000015647) #9	VEPH1 (ENSBGRG00000016007) #11	PTX3 (ENSBGRG00000016322) #12	CCNL1 (ENSBGRG00000016437) #13	LEKR1 (ENSBGRG00000016645) #14	ENSBGRG00000016728	TIPARP (ENSBGRG00000016750) #16	SSR3 (ENSBGRG00000016835) #17	KCNAB1 (ENSBGRG00000017121) #18	ENSBGRG00000017938	GMPS (ENSBGRG00000007144) #20	SLC33A1 (ENSBGRG00000007545) #21	ENSBGRG00000007689	C3orf33 (ENSBGRG00000007709) #22	PLCH1 (ENSBGRG00000007957) #23	ENSBGRG00000009536	STRIT1 (ENSBGRG00000009547) #24	MME (ENSBGRG00000009643) #25	ENSBGRG00000010202	GPR149 (ENSBGRG00000010222) #26	DHX36 (ENSBGRG00000010375) #27	ARHGEF26 (ENSBGRG00000011886) #28	ENSBGRG00000012249	ENSBGRG00000012278	P2RY1 (ENSBGRG00000012398) #31	ENSBGRG00000012435	ENSBGRG00000012450	MBNL1 (ENSBGRG00000012526) #33	SUCNR1 (ENSBGRG00000013608) #34
American bison	MODERN SPECIES	3125													ENSBBBG00000001279 #19	GMPS (ENSBBBG00000001297) #20	SLC33A1 (ENSBBBG00000001364) #21	C3orf33 (ENSBBBG00000001389) #22	PLCH1 (ENSBBBG00000015311) #23	STRIT1 (ENSBBBG00000015180) #24	MME (ENSBBBG00000015170) #25	ENSBBBG00000015065	GPR149 (ENSBBBG00000015060) #26	DHX36 (ENSBBBG00000015040) #27	ENSBBBG00000014942
Siberian musk deer	MODERN SPECIES	1183										ENSMMSG00000011383	TIPARP (ENSMMSG00000011420) #16	SSR3 (ENSMMSG00000011432) #17	KCNAB1 (ENSMMSG00000011581) #18	GMPS (ENSMMSG00000013100) #20	SLC33A1 (ENSMMSG00000013176) #21	C3orf33 (ENSMMSG00000013217) #22	PLCH1 (ENSMMSG00000013316) #23	STRIT1 (ENSMMSG00000014519) #24	MME (ENSMMSG00000014537) #25	ENSMMSG00000014648	GPR149 (ENSMMSG00000014655) #26	DHX36 (ENSMMSG00000014726) #27	ENSMMSG00000015280	ENSMMSG00000015319	RAP2B (ENSMMSG00000015344) #29	ENSMMSG00000015354	P2RY1 (ENSMMSG00000015380) #31	MBNL1 (ENSMMSG00000015435) #33	SUCNR1 (ENSMMSG00000015945) #34	ENSMMSG00000015969 #35	ENSMMSG00000016002 #35
Yarkand deer	MODERN SPECIES	10	RARRES1 (ENSCHYG00000018389)	GFM1 (ENSCHYG00000018556)	MLF1 (ENSCHYG00000018977)	RSRC1 (ENSCHYG00000019368)	SHOX2 (ENSCHYG00000019538) #9	VEPH1 (ENSCHYG00000019688) #11	PTX3 (ENSCHYG00000019896) #12	CCNL1 (ENSCHYG00000005169) #13	LEKR1 (ENSCHYG00000005267) #14	TIPARP (ENSCHYG00000005381) #16	SSR3 (ENSCHYG00000005427) #17	KCNAB1 (ENSCHYG00000005549) #18	GMPS (ENSCHYG00000006185) #20	ENSCHYG00000006350	SLC33A1 (ENSCHYG00000006374) #21	C3orf33 (ENSCHYG00000006450) #22	PLCH1 (ENSCHYG00000006524) #23	ENSCHYG00000006823	MME (ENSCHYG00000006865) #25	GPR149 (ENSCHYG00000007062) #26	DHX36 (ENSCHYG00000007110) #27	ARHGEF26 (ENSCHYG00000007452) #28	RAP2B (ENSCHYG00000007516) #29	P2RY1 (ENSCHYG00000007564) #31	MBNL1 (ENSCHYG00000007632) #33	SUCNR1 (ENSCHYG00000008303) #34	ENSCHYG00000008311 #35	ENSCHYG00000008329 #35	AADACL2 (ENSCHYG00000008371) #36	ENSCHYG00000008458	IGSF10 (ENSCHYG00000008469) #37
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000167272	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Carnivora	ANCESTRAL SPECIES	10	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000167272	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Caniformia	ANCESTRAL SPECIES		ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Caniformia_b	ANCESTRAL SPECIES		ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Ursidae	ANCESTRAL SPECIES	1	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745.d #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Ursus	ANCESTRAL SPECIES	14	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745.d #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B
American black bear	MODERN SPECIES	1991														GMPS (ENSUAMG00000015465) #20	SLC33A1 (ENSUAMG00000015462) #21	C3orf33 (ENSUAMG00000015459) #22
Polar bear	MODERN SPECIES	112	GFM1 (ENSUMAG00000011268)	LXN (ENSUMAG00000011274)	MLF1 (ENSUMAG00000011284)	RSRC1 (ENSUMAG00000011315)	ENSUMAG00000011328 #9	VEPH1 (ENSUMAG00000011364) #11	ENSUMAG00000011385 #12	CCNL1 (ENSUMAG00000011392) #13	ENSUMAG00000011399 #14	ENSUMAG00000011444	TIPARP (ENSUMAG00000011453) #16	SSR3 (ENSUMAG00000011504) #17	KCNAB1 (ENSUMAG00000011542) #18	GMPS (ENSUMAG00000011640) #20	SLC33A1 (ENSUMAG00000011735) #21	C3orf33 (ENSUMAG00000011751) #22	PLCH1 (ENSUMAG00000011780) #23	ENSUMAG00000011864	ENSUMAG00000011878 #25	ENSUMAG00000011884 #25	GPR149 (ENSUMAG00000011899) #26	DHX36 (ENSUMAG00000011908) #27	ARHGEF26 (ENSUMAG00000011949) #28	RAP2B (ENSUMAG00000011989) #29	P2RY1 (ENSUMAG00000011991) #31	MBNL1 (ENSUMAG00000012004) #33	SUCNR1 (ENSUMAG00000012017) #34	AADAC (ENSUMAG00000012022) #35	AADACL2 (ENSUMAG00000012027) #36	IGSF10 (ENSUMAG00000012038) #37	MED12L (ENSUMAG00000012075)
Giant Panda	MODERN SPECIES		GFM1 (ENSAMEG00000013542)	LXN (ENSAMEG00000013580)	MLF1 (ENSAMEG00000013527)	RSRC1 (ENSAMEG00000029988)	SHOX2 (ENSAMEG00000013513) #9	VEPH1 (ENSAMEG00000003085) #11	PTX3 (ENSAMEG00000013511) #12	CCNL1 (ENSAMEG00000003092) #13	LEKR1 (ENSAMEG00000003113) #14	TIPARP (ENSAMEG00000003118) #16	ENSAMEG00000018879	SSR3 (ENSAMEG00000030214) #17	KCNAB1 (ENSAMEG00000003137) #18	GMPS (ENSAMEG00000002551) #20	SLC33A1 (ENSAMEG00000002592) #21	C3orf33 (ENSAMEG00000024093) #22	PLCH1 (ENSAMEG00000002608) #23	STRIT1 (ENSAMEG00000024481) #24	MME (ENSAMEG00000001740) #25	GPR149 (ENSAMEG00000011712) #26	DHX36 (ENSAMEG00000011721) #27	ARHGEF26 (ENSAMEG00000011755) #28	RAP2B (ENSAMEG00000019139) #29	P2RY1 (ENSAMEG00000019110) #31	MBNL1 (ENSAMEG00000008884) #33	SUCNR1 (ENSAMEG00000008881) #34	AADAC (ENSAMEG00000008866) #35	AADACL2 (ENSAMEG00000008864) #36	IGSF10 (ENSAMEG00000008858) #37	ENSAMEG00000008749	P2RY12 (ENSAMEG00000019091)
Mustelinae	ANCESTRAL SPECIES	59	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Ferret	MODERN SPECIES	211	LXN (ENSMPUG00000002863)	GFM1 (ENSMPUG00000002859)	MLF1 (ENSMPUG00000002854)	RSRC1 (ENSMPUG00000002851)	SHOX2 (ENSMPUG00000002839) #9	PTX3 (ENSMPUG00000002835) #12	VEPH1 (ENSMPUG00000002831) #11	CCNL1 (ENSMPUG00000002825) #13	ENSMPUG00000002816 #14	TIPARP (ENSMPUG00000002811) #16	SSR3 (ENSMPUG00000002806) #17	KCNAB1 (ENSMPUG00000002795) #18	ENSMPUG00000002788 #19	GMPS (ENSMPUG00000002781) #20	SLC33A1 (ENSMPUG00000002776) #21	C3orf33 (ENSMPUG00000002773) #22	PLCH1 (ENSMPUG00000002757) #23	MME (ENSMPUG00000002746) #25	ENSMPUG00000002741	GPR149 (ENSMPUG00000002729) #26	DHX36 (ENSMPUG00000002723) #27	ARHGEF26 (ENSMPUG00000002716) #28	RAP2B (ENSMPUG00000018988) #29	ENSMPUG00000018985	P2RY1 (ENSMPUG00000018978) #31	MBNL1 (ENSMPUG00000002708) #33	SUCNR1 (ENSMPUG00000002700) #34	ENSMPUG00000002674	AADACL2 (ENSMPUG00000002670) #36	IGSF10 (ENSMPUG00000002663) #37	P2RY12 (ENSMPUG00000018975)
American mink	MODERN SPECIES	61														GMPS (ENSNVIG00000012092) #20	SLC33A1 (ENSNVIG00000012116) #21	C3orf33 (ENSNVIG00000012169) #22	PLCH1 (ENSNVIG00000012209) #23	STRIT1 (ENSNVIG00000012323) #24	MME (ENSNVIG00000012334) #25	GPR149 (ENSNVIG00000012479) #26	DHX36 (ENSNVIG00000012493) #27	ARHGQ (ENSNVIG00000012585) #28	RAP2B (ENSNVIG00000012670) #29	P2RY1 (ENSNVIG00000012681) #31	MBNL1 (ENSNVIG00000012696) #33	SUCNR1 (ENSNVIG00000012963) #34	AADACL2 (ENSNVIG00000012970) #36	IGSF10 (ENSNVIG00000013004) #37	MED12L (ENSNVIG00000013027)	P2RY12 (ENSNVIG00000013274)	P2RY13 (ENSNVIG00000013277)
Canidae	ANCESTRAL SPECIES	24	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.a.a ##17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Red fox	DUPLICATION
Red fox	MODERN SPECIES	56	GFM1 (ENSVVUG00000020091)	MLF1 (ENSVVUG00000020071)	ENSVVUG00000020068	ENSVVUG00000020061	SHOX2 (ENSVVUG00000020055) #9	ENSVVUG00000020036 #11	ENSVVUG00000020034 #12	ENSVVUG00000020028 #11	CCNL1 (ENSVVUG00000019906) #13	LEKR1 (ENSVVUG00000019882) #14	TIPARP (ENSVVUG00000019862) #16	ENSVVUG00000019852 ##17	KCNAB1 (ENSVVUG00000019840) #18	GMPS (ENSVVUG00000019829) #20	SLC33A1 (ENSVVUG00000019826) #21	ENSVVUG00000019825 #22	PCLO (ENSVVUG00000019718)	CACNA2D1 (ENSVVUG00000019647)	HGF (ENSVVUG00000019636)	ENSVVUG00000019629	SEMA3C (ENSVVUG00000019617)	CD36 (ENSVVUG00000019582)	GNAT3 (ENSVVUG00000019546)	ENSVVUG00000019542	GNAI1 (ENSVVUG00000019537)	MAGI2 (ENSVVUG00000019514)	PHTF2 (ENSVVUG00000019501)	TMEM60 (ENSVVUG00000019495)	RSBN1L (ENSVVUG00000019480)	ENSVVUG00000019476	PTPN12 (ENSVVUG00000019465)
Red fox	MODERN SPECIES	26	AHI1 (ENSVVUG00000000451)	ENSVVUG00000000569	PDE7B (ENSVVUG00000000584)	MTFR2 (ENSVVUG00000000593)	ENSVVUG00000000603	ENSVVUG00000000623	MAP7 (ENSVVUG00000000652)	MAP3K5 (ENSVVUG00000000760)	ENSVVUG00000002154	PEX7 (ENSVVUG00000002175)	SLC35D3 (ENSVVUG00000002202)	IL20RA (ENSVVUG00000002217)	IL22RA2 (ENSVVUG00000002229)	IFNGR1 (ENSVVUG00000002286)	ENSVVUG00000002326	ENSVVUG00000002335 #22	OLIG3 (ENSVVUG00000002352)	ENSVVUG00000002359	TNFAIP3 (ENSVVUG00000002369)	ENSVVUG00000002382	ARFGEF3 (ENSVVUG00000002408)	HEBP2 (ENSVVUG00000002586)	NHSL1 (ENSVVUG00000002603)	CCDC28A (ENSVVUG00000002636)	ENSVVUG00000002647	REPS1 (ENSVVUG00000002733)	ABRACL (ENSVVUG00000004368)	ENSVVUG00000004375	TXLNB (ENSVVUG00000004389)	ENSVVUG00000004483	NMBR (ENSVVUG00000004507)
Canis_lupus	ANCESTRAL SPECIES	27	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000178902	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.a.b.a ##17	ENSGT00390000000970.a.a ##17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Dingo	MODERN SPECIES	115	GFM1 (ENSCAFG00020005878)	ENSCAFG00020005828	RSRC1 (ENSCAFG00020005818)	SHOX2 (ENSCAFG00020005811) #9	ENSCAFG00020005806	ENSCAFG00020005804 #12	CCNL1 (ENSCAFG00020005656) #13	LEKR1 (ENSCAFG00020005636) #14	ENSCAFG00020005632	TIPARP (ENSCAFG00020005619) #16	ENSCAFG00020005606 ##17	ENSCAFG00020005601	KCNAB1 (ENSCAFG00020005593) #18	GMPS (ENSCAFG00020005568) #20	SLC33A1 (ENSCAFG00020005560) #21	C3orf33 (ENSCAFG00020005555) #22	PLCH1 (ENSCAFG00020005412) #23	ENSCAFG00020005383 #25	ENSCAFG00020005378 #25	GPR149 (ENSCAFG00020005372) #26	DHX36 (ENSCAFG00020004966) #27	ARHGEF26 (ENSCAFG00020004904) #28	RAP2B (ENSCAFG00020004894) #29	P2RY1 (ENSCAFG00020004892) #31	MBNL1 (ENSCAFG00020004737) #33	SUCNR1 (ENSCAFG00020004722) #34	AADAC (ENSCAFG00020004717) #35	AADACL2 (ENSCAFG00020004698) #36	IGSF10 (ENSCAFG00020004678) #37	P2RY12 (ENSCAFG00020004675)	P2RY13 (ENSCAFG00020004672)
Dog	MODERN SPECIES	15	ENSCAFG00845025008	LXN (ENSCAFG00845024952)	GFM1 (ENSCAFG00845024782)	MLF1 (ENSCAFG00845024615)	RSRC1 (ENSCAFG00845024332)	SHOX2 (ENSCAFG00845024168) #9	ENSCAFG00845024115 #12	VEPH1 (ENSCAFG00845023758) #11	CCNL1 (ENSCAFG00845023534) #13	LEKR1 (ENSCAFG00845023191) #14	TIPARP (ENSCAFG00845023055) #16	ENSCAFG00845023016 ##17	KCNAB1 (ENSCAFG00845022469) #18	GMPS (ENSCAFG00845021930) #20	SLC33A1 (ENSCAFG00845021734) #21	C3orf33 (ENSCAFG00845021566) #22	ENSCAFG00845021471	PLCH1 (ENSCAFG00845021263) #23	STRIT1 (ENSCAFG00845021186) #24	MME (ENSCAFG00845020957) #25	GPR149 (ENSCAFG00845020850) #26	DHX36 (ENSCAFG00845020573) #27	ARHGEF26 (ENSCAFG00845020247) #28	RAP2B (ENSCAFG00845020015) #29	P2RY1 (ENSCAFG00845027994) #31	MBNL1 (ENSCAFG00845027626) #33	ENSCAFG00845027427	SUCNR1 (ENSCAFG00845027383) #34	AADAC (ENSCAFG00845027279) #35	AADAC (ENSCAFG00845027240) #36	IGSF10 (ENSCAFG00845027170) #37
Felidae	ANCESTRAL SPECIES	9	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000167272	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Panthera	ANCESTRAL SPECIES	12	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000167272	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Panthera_a	ANCESTRAL SPECIES	17	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000167272	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
leopard	MODERN SPECIES	5	GFM1 (ENSPPRG00000009281)	MLF1 (ENSPPRG00000010057)	ENSPPRG00000010610	RSRC1 (ENSPPRG00000012590)	SHOX2 (ENSPPRG00000012987) #9	ENSPPRG00000013159	PTX3 (ENSPPRG00000013280) #12	VEPH1 (ENSPPRG00000014553) #11	CCNL1 (ENSPPRG00000015223) #13	LEKR1 (ENSPPRG00000016442) #14	TIPARP (ENSPPRG00000017076) #16	SSR3 (ENSPPRG00000018310) #17	KCNAB1 (ENSPPRG00000024997) #18	GMPS (ENSPPRG00000024889) #20	SLC33A1 (ENSPPRG00000024861) #21	C3orf33 (ENSPPRG00000024803) #22	PLCH1 (ENSPPRG00000023905) #23	STRIT1 (ENSPPRG00000023798) #24	MME (ENSPPRG00000023388) #25	GPR149 (ENSPPRG00000023313) #26	DHX36 (ENSPPRG00000002879) #27	ARHGEF26 (ENSPPRG00000003558) #28	ENSPPRG00000003876	RAP2B (ENSPPRG00000014584) #29	P2RY1 (ENSPPRG00000014596) #31	MBNL1 (ENSPPRG00000005721) #33	SUCNR1 (ENSPPRG00000014600) #34	AADAC (ENSPPRG00000006081) #35	AADACL2 (ENSPPRG00000006624) #36	ENSPPRG00000006746 #36	IGSF10 (ENSPPRG00000006930) #37
lion	MODERN SPECIES	9	LXN (ENSPLOG00000013849)	GFM1 (ENSPLOG00000013707)	MLF1 (ENSPLOG00000013649)	ENSPLOG00000013628	RSRC1 (ENSPLOG00000013528)	SHOX2 (ENSPLOG00000013339) #9	PTX3 (ENSPLOG00000013109) #12	VEPH1 (ENSPLOG00000012921) #11	CCNL1 (ENSPLOG00000012698) #13	LEKR1 (ENSPLOG00000012490) #14	TIPARP (ENSPLOG00000012424) #16	SSR3 (ENSPLOG00000012356) #17	KCNAB1 (ENSPLOG00000011367) #18	GMPS (ENSPLOG00000010967) #20	SLC33A1 (ENSPLOG00000010862) #21	C3orf33 (ENSPLOG00000010806) #22	PLCH1 (ENSPLOG00000010097) #23	STRIT1 (ENSPLOG00000009947) #24	MME (ENSPLOG00000009835) #25	GPR149 (ENSPLOG00000009781) #26	DHX36 (ENSPLOG00000009521) #27	ARHGEF26 (ENSPLOG00000009339) #28	RAP2B (ENSPLOG00000009294) #29	P2RY1 (ENSPLOG00000009202) #31	MBNL1 (ENSPLOG00000008833) #33	SUCNR1 (ENSPLOG00000008719) #34	AADACL2 (ENSPLOG00000008683) #36	ENSPLOG00000008594 #36	IGSF10 (ENSPLOG00000008540) #37	P2RY12 (ENSPLOG00000008519)	P2RY13 (ENSPLOG00000008510)
Tiger	MODERN SPECIES	242	GFM1 (ENSPTIG00000012416)	LXN (ENSPTIG00000013811)	MLF1 (ENSPTIG00000014178)	RSRC1 (ENSPTIG00000017358)	SHOX2 (ENSPTIG00000002610) #9	ENSPTIG00000007545	VEPH1 (ENSPTIG00000007873) #11	PTX3 (ENSPTIG00000011127) #12	CCNL1 (ENSPTIG00000011507) #13	LEKR1 (ENSPTIG00000013039) #14	TIPARP (ENSPTIG00000014258) #16	SSR3 (ENSPTIG00000016314) #17	KCNAB1 (ENSPTIG00000018164) #18	GMPS (ENSPTIG00000012623) #20	SLC33A1 (ENSPTIG00000014526) #21	C3orf33 (ENSPTIG00000014993) #22	PLCH1 (ENSPTIG00000015618) #23	STRIT1 (ENSPTIG00000010401) #24	MME (ENSPTIG00000016196) #25	GPR149 (ENSPTIG00000017502) #26	DHX36 (ENSPTIG00000018478) #27	ARHGEF26 (ENSPTIG00000021954) #28	P2RY1 (ENSPTIG00000002203) #31	MBNL1 (ENSPTIG00000022119) #33	SUCNR1 (ENSPTIG00000012951) #34	AADACL2 (ENSPTIG00000014555) #36	ENSPTIG00000015317 #36	IGSF10 (ENSPTIG00000015886) #37	MED12L (ENSPTIG00000017099)	P2RY12 (ENSPTIG00000003600)	P2RY13 (ENSPTIG00000009474)
Cat	MODERN SPECIES	240	LXN (ENSFCAG00000013292)	MLF1 (ENSFCAG00000022176)	RSRC1 (ENSFCAG00000013290)	ENSFCAG00000051036	SHOX2 (ENSFCAG00000037357) #9	VEPH1 (ENSFCAG00000015589) #11	PTX3 (ENSFCAG00000003464) #12	ENSFCAG00000047506	CCNL1 (ENSFCAG00000005138) #13	LEKR1 (ENSFCAG00000025717) #14	TIPARP (ENSFCAG00000013314) #16	SSR3 (ENSFCAG00000028606) #17	KCNAB1 (ENSFCAG00000005945) #18	GMPS (ENSFCAG00000025327) #20	SLC33A1 (ENSFCAG00000027140) #21	CC2H3orf33 (ENSFCAG00000044100) #22	PLCH1 (ENSFCAG00000012834) #23	STRIT1 (ENSFCAG00000046459) #24	MME (ENSFCAG00000004615) #25	GPR149 (ENSFCAG00000004861) #26	DHX36 (ENSFCAG00000004860) #27	ARHGEF26 (ENSFCAG00000028110) #28	RAP2B (ENSFCAG00000005952) #29	P2RY1 (ENSFCAG00000013018) #31	MBNL1 (ENSFCAG00000028419) #33	SUCNR1 (ENSFCAG00000000221) #34	AADACL2 (ENSFCAG00000022581) #36	ENSFCAG00000026683 #36	IGSF10 (ENSFCAG00000010400) #37	MED12L (ENSFCAG00000010395)	P2RY13 (ENSFCAG00000046452)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Equus	ANCESTRAL SPECIES	5													ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00950000182895.a.a.a.b.f	ENSGT00940000157185 #23	ENSGT01080000259939	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975.j #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT01060000248592.E
Donkey	MODERN SPECIES	13	IFNGR1 (ENSEASG00005011722)	OLIG3 (ENSEASG00005011723)	TNFAIP3 (ENSEASG00005011724)	ENSEASG00005034498	ARFGEF3 (ENSEASG00005011767)	SMIM28 (ENSEASG00005028436)	HEBP2 (ENSEASG00005034494)	ENSEASG00005028125	ENSEASG00005037446	CCDC28A (ENSEASG00005011995)	ECT2L (ENSEASG00005012001)	ENSEASG00005012008	ENSEASG00005022521 #19	ENSEASG00005022509 #20	SLC33A1 (ENSEASG00005022505) #21	C3orf33 (ENSEASG00005022502) #22	ENSEASG00005022500	PLCH1 (ENSEASG00005022484) #23	ENSEASG00005038568	MME (ENSEASG00005022266) #25	GPR149 (ENSEASG00005020678) #26	DHX36 (ENSEASG00005020682) #27	ARHGEF26 (ENSEASG00005020696) #28	RAP2B (ENSEASG00005034390) #29	P2RY1 (ENSEASG00005025565) #31	MBNL1 (ENSEASG00005020731) #33	SUCNR1 (ENSEASG00005025304) #34	AADAC (ENSEASG00005025316) #35	ENSEASG00005035766	ENSEASG00005020751 #35	AADACL2 (ENSEASG00005020769) #36
Horse	MODERN SPECIES	7													ENSECAG00000024575 #19	GMPS (ENSECAG00000023269) #20	SLC33A1 (ENSECAG00000022461) #21	C3orf33 (ENSECAG00000053423) #22	ENSECAG00000001897	PLCH1 (ENSECAG00000016623) #23	ENSECAG00000039581	MME (ENSECAG00000009138) #25	ENSECAG00000054272	GPR149 (ENSECAG00000009123) #26	DHX36 (ENSECAG00000025100) #27	ENSECAG00000023848	ARHGEF26 (ENSECAG00000025019) #28	RAP2B (ENSECAG00000024986) #29	P2RY1 (ENSECAG00000001845) #31	MBNL1 (ENSECAG00000024349) #33	SUCNR1 (ENSECAG00000024345) #34	ENSECAG00000042933 #35	ENSECAG00000027989
Chiroptera	ANCESTRAL SPECIES	13	ENSGT00530000063813.a	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Megabat	MODERN SPECIES	31																C3orf33 (ENSPVAG00000007212) #22	PLCH1 (ENSPVAG00000007208) #23
Microchiroptera	ANCESTRAL SPECIES	11	ENSGT00530000063813.a	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36
Microbat	MODERN SPECIES	1007	GFM1 (ENSMLUG00000000452)	LXN (ENSMLUG00000000462)	MLF1 (ENSMLUG00000000447)	SHOX2 (ENSMLUG00000024898) #9	VEPH1 (ENSMLUG00000000477) #11	PTX3 (ENSMLUG00000000487) #12	CCNL1 (ENSMLUG00000015049) #13	LEKR1 (ENSMLUG00000012119) #14	TIPARP (ENSMLUG00000006995) #16	ENSMLUG00000009885	SSR3 (ENSMLUG00000015478) #17	KCNAB1 (ENSMLUG00000015462) #18	GMPS (ENSMLUG00000015442) #20	ENSMLUG00000024763	SLC33A1 (ENSMLUG00000001019) #21	C3orf33 (ENSMLUG00000026622) #22	ENSMLUG00000005520 #23	ENSMLUG00000027166	MME (ENSMLUG00000014941) #25	GPR149 (ENSMLUG00000012000) #26	DHX36 (ENSMLUG00000002318) #27	ARHGEF26 (ENSMLUG00000002307) #28	P2RY1 (ENSMLUG00000027366) #31
Atlantogenata	ANCESTRAL SPECIES	45	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B
Xenarthra	ANCESTRAL SPECIES	142	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23
Armadillo	MODERN SPECIES	1154	PTX3 (ENSDNOG00000036438) #12	ENSDNOG00000031998	CCNL1 (ENSDNOG00000009325) #13	ENSDNOG00000039650 #14	ENSDNOG00000031446	ENSDNOG00000046381	TIPARP (ENSDNOG00000006676) #16	ENSDNOG00000048811	ENSDNOG00000000752 #17	KCNAB1 (ENSDNOG00000000745) #18	ENSDNOG00000038913	ENSDNOG00000019348 #19	GMPS (ENSDNOG00000017772) #20	ENSDNOG00000040652	SLC33A1 (ENSDNOG00000045008) #21	C3orf33 (ENSDNOG00000031969) #22	PLCH1 (ENSDNOG00000008919) #23	ENSDNOG00000041013
Sloth	MODERN SPECIES	6195																C3orf33 (ENSCHOG00000013532) #22
Afrotheria	ANCESTRAL SPECIES	59	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D	ENSGT01060000248592.C
Tenrec	MODERN SPECIES	6803															SLC33A1 (ENSETEG00000008625) #21	C3orf33 (ENSETEG00000008620) #22
Afrotheria_a	ANCESTRAL SPECIES	57	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT00940000155975 #35	ENSGT00940000161405 #36	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D	ENSGT01060000248592.C
Hyrax	MODERN SPECIES	5751																C3orf33 (ENSPCAG00000015165) #22
Elephant	MODERN SPECIES	383	MLF1 (ENSLAFG00000010939)	ENSLAFG00000017819	SHOX2 (ENSLAFG00000017816) #9	ENSLAFG00000000904	VEPH1 (ENSLAFG00000011038) #11	PTX3 (ENSLAFG00000011043) #12	CCNL1 (ENSLAFG00000007715) #13	ENSLAFG00000014510 #14	ENSLAFG00000029018	TIPARP (ENSLAFG00000008210) #16	SSR3 (ENSLAFG00000014757) #17	KCNAB1 (ENSLAFG00000014751) #18	ENSLAFG00000010095 #19	GMPS (ENSLAFG00000012230) #20	SLC33A1 (ENSLAFG00000015062) #21	C3orf33 (ENSLAFG00000015059) #22	PLCH1 (ENSLAFG00000001248) #23	MME (ENSLAFG00000015397) #25	GPR149 (ENSLAFG00000015353) #26	DHX36 (ENSLAFG00000015342) #27	ENSLAFG00000011446 #28	P2RY1 (ENSLAFG00000028360) #31	MBNL1 (ENSLAFG00000017683) #33	ENSLAFG00000028332	AADAC (ENSLAFG00000016283) #35	AADACL2 (ENSLAFG00000007175) #36	ENSLAFG00000029762 #36	IGSF10 (ENSLAFG00000000038) #37	MED12L (ENSLAFG00000000027)	P2RY12 (ENSLAFG00000003890)	P2RY13 (ENSLAFG00000022576)
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00950000182930.B	ENSGT00950000182930.A.a	ENSGT00950000182930.A.b	ENSGT00950000182930.C	ENSGT00940000159865
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000166505 #24	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00950000182930.B	ENSGT00950000182930.A.a	ENSGT00950000182930.A.b	ENSGT00950000182930.C
Diprotodontia	ANCESTRAL SPECIES	17	ENSGT00530000063813.a	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00950000182930.B	ENSGT00950000182930.A.a	ENSGT00950000182930.A.b	ENSGT00950000182930.C	ENSGT00940000159865
Diprotodontia_a	ANCESTRAL SPECIES	19	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970.b #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00950000182930.B	ENSGT00950000182930.A.a	ENSGT00950000182930.A.b	ENSGT00950000182930.C	ENSGT00940000159865
Common wonbat	MODERN SPECIES	1046	ENSVURG00010016763	MLF1 (ENSVURG00010016775)	RSRC1 (ENSVURG00010016788)	SHOX2 (ENSVURG00010016800) #9	VEPH1 (ENSVURG00010016819) #11	PTX3 (ENSVURG00010016844) #12	CCNL1 (ENSVURG00010016857) #13	ENSVURG00010016876 #14	ENSVURG00010016886	TIPARP (ENSVURG00010016896) #16	SSR3 (ENSVURG00010016903) #17	KCNAB1 (ENSVURG00010016914) #18	ENSVURG00010016928 #19	GMPS (ENSVURG00010016941) #20	SLC33A1 (ENSVURG00010016955) #21	ENSVURG00010016972 #22	PLCH1 (ENSVURG00010017004) #23	ENSVURG00010017174	MME (ENSVURG00010017187) #25	GPR149 (ENSVURG00010017273) #26	DHX36 (ENSVURG00010017291) #27	ARHGEF26 (ENSVURG00010017313) #28	RAP2B (ENSVURG00010017346) #29	P2RY1 (ENSVURG00010017360) #31	MBNL1 (ENSVURG00010017405) #33	SUCNR1 (ENSVURG00010017482) #34	AADAC (ENSVURG00010017488) #35	ENSVURG00010017495	ENSVURG00010017506	ENSVURG00010017518	AHSG (ENSVURG00010017527)
koala	MODERN SPECIES	33	MLF1 (ENSPCIG00000020160)	RSRC1 (ENSPCIG00000032999)	SHOX2 (ENSPCIG00000001160) #9	VEPH1 (ENSPCIG00000003684) #11	PTX3 (ENSPCIG00000036781) #12	ENSPCIG00000003670 #13	ENSPCIG00000031903 #14	ENSPCIG00000003648	TIPARP (ENSPCIG00000003641) #16	ENSPCIG00000003630 ##17	KCNAB1 (ENSPCIG00000003598) #18	ENSPCIG00000037318	ENSPCIG00000000035 #19	GMPS (ENSPCIG00000000036) #20	SLC33A1 (ENSPCIG00000000037) #21	C3orf33 (ENSPCIG00000000038) #22	PLCH1 (ENSPCIG00000000039) #23	MME (ENSPCIG00000000041) #25	GPR149 (ENSPCIG00000000044) #26	DHX36 (ENSPCIG00000000045) #27	ARHGEF26 (ENSPCIG00000036495) #28	ENSPCIG00000027226	RAP2B (ENSPCIG00000028767) #29	P2RY1 (ENSPCIG00000034707) #31	MBNL1 (ENSPCIG00000019478) #33	SUCNR1 (ENSPCIG00000005188) #34	ENSPCIG00000005183 #35	ENSPCIG00000033990	ENSPCIG00000010050	AHSG (ENSPCIG00000010049)	ENSPCIG00000005171
Wallaby	MODERN SPECIES	8343																C3orf33 (ENSMEUG00000010993) #22
Tasmanian devil	MODERN SPECIES	2	LXN (ENSSHAG00000023262)	GFM1 (ENSSHAG00000017772)	MLF1 (ENSSHAG00000017825)	RSRC1 (ENSSHAG00000021746)	ENSSHAG00000025260 #9	PTX3 (ENSSHAG00000032216) #12	VEPH1 (ENSSHAG00000018730) #11	CCNL1 (ENSSHAG00000018819) #13	ENSSHAG00000026588 #14	TIPARP (ENSSHAG00000028913) #16	SSR3 (ENSSHAG00000023585) #17	KCNAB1 (ENSSHAG00000004797) #18	ENSSHAG00000009677 #19	GMPS (ENSSHAG00000010345) #20	SLC33A1 (ENSSHAG00000029855) #21	ENSSHAG00000028439 #22	PLCH1 (ENSSHAG00000012063) #23	STRIT1 (ENSSHAG00000031937) #24	MME (ENSSHAG00000013418) #25	GPR149 (ENSSHAG00000029857) #26	DHX36 (ENSSHAG00000016292) #27	ARHGEF26 (ENSSHAG00000016399) #28	P2RY1 (ENSSHAG00000025343) #31	MBNL1 (ENSSHAG00000018364) #33	ENSSHAG00000031492 #34	ENSSHAG00000001815 #35	ENSSHAG00000003664	ENSSHAG00000004328	ENSSHAG00000026129	ENSSHAG00000027914	ENSSHAG00000029302
Platypus	MODERN SPECIES		RBP1 (ENSOANG00000002683)	ENSOANG00000041359	ENSOANG00000002680	CLSTN2 (ENSOANG00000000204)	TRIM42 (ENSOANG00000014969)	ENSOANG00000012051	SLC25A36 (ENSOANG00000050040)	PXYLP1 (ENSOANG00000022504)	LEKR1 (ENSOANG00000028954) #14	TIPARP (ENSOANG00000051335) #16	SSR3 (ENSOANG00000041038) #17	KCNAB1 (ENSOANG00000038732) #18	ENSOANG00000010029 #19	GMPS (ENSOANG00000013670) #20	SLC33A1 (ENSOANG00000010031) #21	ENSOANG00000010032 #22	PLCH1 (ENSOANG00000012464) #23	MME (ENSOANG00000009510) #25	GPR149 (ENSOANG00000041736) #26	DHX36 (ENSOANG00000007079) #27	ARHGEF26 (ENSOANG00000044706) #28	RAP2B (ENSOANG00000045350) #29	P2RY1 (ENSOANG00000011870) #31	MBNL1 (ENSOANG00000007992) #33	ENSOANG00000045237 #34	ENSOANG00000037737 #34	AADAC (ENSOANG00000009529) #35	IGSF10 (ENSOANG00000010952) #37	MED12L (ENSOANG00000013198)	P2RY12 (ENSOANG00000012173)	P2RY13 (ENSOANG00000013417)
Sauria	ANCESTRAL SPECIES	9	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Archelosauria	ANCESTRAL SPECIES	11	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Archosauria	ANCESTRAL SPECIES	10	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Aves	ANCESTRAL SPECIES	13	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Neognathae	ANCESTRAL SPECIES	9	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Galloanserae	ANCESTRAL SPECIES	16	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Anatidae	ANCESTRAL SPECIES	31	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT00850000132319.a.a.a	ENSGT00940000159812	ENSGT00940000153655.A.b
Pink-footed goose	MODERN SPECIES	97	LXN (ENSABRG00000002995)	GFM1 (ENSABRG00000001459)	MLF1 (ENSABRG00000001346)	RSRC1 (ENSABRG00000001329)	ENSABRG00000001255	PTX3 (ENSABRG00000001205) #12	VEPH1 (ENSABRG00000001126) #11	CCNL1 (ENSABRG00000001075) #13	LEKR1 (ENSABRG00000000923) #14	TIPARP (ENSABRG00000000888) #16	SSR3 (ENSABRG00000000872) #17	KCNAB1 (ENSABRG00000000815) #18	ENSABRG00000019823 #18	GMPS (ENSABRG00000019797) #20	SLC33A1 (ENSABRG00000019790) #21	C3orf33 (ENSABRG00000019787) #22	PLCH1 (ENSABRG00000019784) #23	MME (ENSABRG00000019778) #25	GPR149 (ENSABRG00000019773) #26	DHX36 (ENSABRG00000019769) #27	ARHGEF26 (ENSABRG00000019762) #28	RAP2B (ENSABRG00000019748) #29	P2RY1 (ENSABRG00000019744) #31	MBNL1 (ENSABRG00000019722) #33	SUCNR1 (ENSABRG00000019709) #34	AADAC (ENSABRG00000019699) #35	IGSF10 (ENSABRG00000019669) #37	GPR87 (ENSABRG00000019665)	P2RY14 (ENSABRG00000019663)	MED12L (ENSABRG00000019397)	CLRN1 (ENSABRG00000019386)
Duck	MODERN SPECIES	27	GFM1 (ENSAPLG00000005022)	LXN (ENSAPLG00000005337)	MLF1 (ENSAPLG00000005007)	RSRC1 (ENSAPLG00000004783)	SHOX2 (ENSAPLG00000028948) #9	ENSAPLG00000004823	VEPH1 (ENSAPLG00000004613) #11	PTX3 (ENSAPLG00000004626) #12	CCNL1 (ENSAPLG00000010427) #13	LEKR1 (ENSAPLG00000010703) #14	TIPARP (ENSAPLG00000010788) #16	SSR3 (ENSAPLG00000010825) #17	KCNAB1 (ENSAPLG00000011083) #18	GMPS (ENSAPLG00000011347) #20	SLC33A1 (ENSAPLG00000018174) #21	C3orf33 (ENSAPLG00000015160) #22	PLCH1 (ENSAPLG00000014302) #23	MME (ENSAPLG00000013114) #25	GPR149 (ENSAPLG00000013026) #26	DHX36 (ENSAPLG00000012597) #27	ARHGEF26 (ENSAPLG00000012467) #28	RAP2B (ENSAPLG00000022231) #29	P2RY1 (ENSAPLG00000001615) #31	MBNL1 (ENSAPLG00000012049) #33	SUCNR1 (ENSAPLG00000011989) #34	AADAC (ENSAPLG00000011863) #35	ENSAPLG00000019073	IGSF10 (ENSAPLG00000011740) #37	MED12L (ENSAPLG00000010557)	P2RY13 (ENSAPLG00000001613)	GPR171 (ENSAPLG00000011531)
Phasianidae	ANCESTRAL SPECIES	9	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660.a #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Japanese quail	MODERN SPECIES	27	LXN (ENSCJPG00005018105)	MLF1 (ENSCJPG00005018106)	RSRC1 (ENSCJPG00005018107)	SHOX2 (ENSCJPG00005018108) #9	ENSCJPG00005018111	ENSCJPG00005018112 #11	PTX3 (ENSCJPG00005018113) #12	ENSCJPG00005018114 #11	CCNL1 (ENSCJPG00005018116) #13	LEKR1 (ENSCJPG00005018118) #14	TIPARP (ENSCJPG00005018120) #16	SSR3 (ENSCJPG00005018121) #17	KCNAB1 (ENSCJPG00005018122) #18	GMPS (ENSCJPG00005018125) #20	SLC33A1 (ENSCJPG00005018128) #21	C3orf33 (ENSCJPG00005018129) #22	PLCH1 (ENSCJPG00005018132) #23	MME (ENSCJPG00005018136) #25	GPR149 (ENSCJPG00005018139) #26	DHX36 (ENSCJPG00005018141) #27	ARHGEF26 (ENSCJPG00005018143) #28	RAP2B (ENSCJPG00005018144) #29	P2RY1 (ENSCJPG00005018145) #31	MBNL1 (ENSCJPG00005018147) #33	ENSCJPG00005018148	SUCNR1 (ENSCJPG00005018150) #34	AADAC (ENSCJPG00005018151) #35	IGSF10 (ENSCJPG00005018154) #37	MED12L (ENSCJPG00005018213)	P2RY12 (ENSCJPG00005018732)	P2RY13 (ENSCJPG00005018733)
Phasianidae_b	ANCESTRAL SPECIES	12	ENSGT00550000074911	ENSGT00530000063813.b	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660.a #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Chicken	MODERN SPECIES	38	LXN (ENSGALG00010001190)	MLF1 (ENSGALG00010001192)	RSRC1 (ENSGALG00010001206)	SHOX2 (ENSGALG00010001216) #9	ENSGALG00010001217	ENSGALG00010001218	VEPH1 (ENSGALG00010001226) #11	PTX3 (ENSGALG00010001230) #12	CCNL1 (ENSGALG00010001495) #13	LEKR1 (ENSGALG00010001497) #14	TIPARP (ENSGALG00010001499) #16	SSR3 (ENSGALG00010001505) #17	KCNAB1 (ENSGALG00010001520) #18	GMPS (ENSGALG00010001301) #20	SLC33A1 (ENSGALG00010001066) #21	C3orf33 (ENSGALG00010001070) #22	PLCH1 (ENSGALG00010001333) #23	MME (ENSGALG00010001385) #25	GPR149 (ENSGALG00010001450) #26	DHX36 (ENSGALG00010001462) #27	ARHGEF26 (ENSGALG00010001469) #28	ENSGALG00010001493	RAP2B (ENSGALG00010001535) #29	P2RY1 (ENSGALG00010001082) #31	MBNL1 (ENSGALG00010001104) #33	SUCNR1 (ENSGALG00010001111) #34	AADAC (ENSGALG00010001708) #35	IGSF10 (ENSGALG00010001113) #37	MED12L (ENSGALG00010001114)	P2RY12 (ENSGALG00010001118)	P2RY13 (ENSGALG00010001117)
Turkey	MODERN SPECIES	2	GFM1 (ENSMGAG00000010641)	LXN (ENSMGAG00000018871)	MLF1 (ENSMGAG00000010656)	RSRC1 (ENSMGAG00000010633)	SHOX2 (ENSMGAG00000021833) #9	ENSMGAG00000022083	VEPH1 (ENSMGAG00000010670) #11	PTX3 (ENSMGAG00000010676) #12	CCNL1 (ENSMGAG00000010679) #13	ENSMGAG00000010696	TIPARP (ENSMGAG00000010699) #16	SSR3 (ENSMGAG00000010707) #17	KCNAB1 (ENSMGAG00000010715) #18	GMPS (ENSMGAG00000010733) #20	SLC33A1 (ENSMGAG00000010750) #21	C3orf33 (ENSMGAG00000010753) #22	PLCH1 (ENSMGAG00000010755) #23	MME (ENSMGAG00000010779) #25	GPR149 (ENSMGAG00000010831) #26	DHX36 (ENSMGAG00000010853) #27	ARHGEF26 (ENSMGAG00000010835) #28	RAP2B (ENSMGAG00000010860) #29	P2RY1 (ENSMGAG00000016075) #31	ENSMGAG00000020939	MBNL1 (ENSMGAG00000010862) #33	SUCNR1 (ENSMGAG00000010883) #34	AADAC (ENSMGAG00000010885) #35	ENSMGAG00000022260 #37	ENSMGAG00000010910	P2RY12 (ENSMGAG00000020686)	GPR87 (ENSMGAG00000010921)
Neognathae_b	ANCESTRAL SPECIES	11	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Passeriformes	ANCESTRAL SPECIES	9	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00960000189716	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D	ENSGT01060000248592.C
Great tit	MODERN SPECIES	29	GFM1 (ENSPMJG00000005877)	MLF1 (ENSPMJG00000006472)	ENSPMJG00000006474	ENSPMJG00000006475	SHOX2 (ENSPMJG00000006476) #9	VEPH1 (ENSPMJG00000006562) #11	PTX3 (ENSPMJG00000006575) #12	CCNL1 (ENSPMJG00000006580) #13	LEKR1 (ENSPMJG00000006710) #14	TIPARP (ENSPMJG00000006715) #16	SSR3 (ENSPMJG00000006717) #17	KCNAB1 (ENSPMJG00000006726) #18	ENSPMJG00000006735	GMPS (ENSPMJG00000006742) #20	SLC33A1 (ENSPMJG00000006748) #21	C3orf33 (ENSPMJG00000006750) #22	PLCH1 (ENSPMJG00000006754) #23	MME (ENSPMJG00000006763) #25	GPR149 (ENSPMJG00000006770) #26	DHX36 (ENSPMJG00000006774) #27	ARHGEF26 (ENSPMJG00000006839) #28	RAP2B (ENSPMJG00000006998) #29	P2RY1 (ENSPMJG00000007004) #31	MBNL1 (ENSPMJG00000007009) #33	SUCNR1 (ENSPMJG00000007026) #34	AADAC (ENSPMJG00000007027) #35	ENSPMJG00000007037 #37	P2RY12 (ENSPMJG00000007055)	P2RY13 (ENSPMJG00000007057)	GPR87 (ENSPMJG00000007060)	ENSPMJG00000007062
Passeriformes_d	ANCESTRAL SPECIES	10	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00960000189716	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D	ENSGT01060000248592.C
Passeriformes_g	ANCESTRAL SPECIES	11	ENSGT00530000063813.a	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D	ENSGT01060000248592.C
Passeroidea	ANCESTRAL SPECIES	13	ENSGT00530000063813.a	ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D	ENSGT01060000248592.C
Zebra finch	MODERN SPECIES	31	GFM1 (ENSTGUG00000028908)	MLF1 (ENSTGUG00000011211)	RSRC1 (ENSTGUG00000011212)	ENSTGUG00000021027	ENSTGUG00000028427	SHOX2 (ENSTGUG00000011221) #9	VEPH1 (ENSTGUG00000011225) #11	PTX3 (ENSTGUG00000011229) #12	CCNL1 (ENSTGUG00000011231) #13	LEKR1 (ENSTGUG00000011239) #14	TIPARP (ENSTGUG00000017448) #16	SSR3 (ENSTGUG00000011245) #17	KCNAB1 (ENSTGUG00000011253) #18	GMPS (ENSTGUG00000011256) #20	SLC33A1 (ENSTGUG00000011271) #21	C3orf33 (ENSTGUG00000019088) #22	PLCH1 (ENSTGUG00000011275) #23	MME (ENSTGUG00000011304) #25	ENSTGUG00000028744	GPR149 (ENSTGUG00000011327) #26	DHX36 (ENSTGUG00000011317) #27	ARHGEF26 (ENSTGUG00000011330) #28	RAP2B (ENSTGUG00000018897) #29	ENSTGUG00000020230	P2RY1 (ENSTGUG00000011335) #31	MBNL1 (ENSTGUG00000011341) #33	SUCNR1 (ENSTGUG00000011348) #34	AADAC (ENSTGUG00000023040) #35	IGSF10 (ENSTGUG00000019363) #37	P2RY12 (ENSTGUG00000026372)	P2RY13 (ENSTGUG00000024805)
Common canary	MODERN SPECIES	10	RARRES1 (ENSSCAG00000009619)	LXN (ENSSCAG00000009605)	GFM1 (ENSSCAG00000009269)	ENSSCAG00000009210	ENSSCAG00000009201	ENSSCAG00000009194	PTX3 (ENSSCAG00000009186) #12	VEPH1 (ENSSCAG00000009174) #11	CCNL1 (ENSSCAG00000009169) #13	LEKR1 (ENSSCAG00000009161) #14	TIPARP (ENSSCAG00000009150) #16	SSR3 (ENSSCAG00000009147) #17	KCNAB1 (ENSSCAG00000009142) #18	GMPS (ENSSCAG00000009120) #20	SLC33A1 (ENSSCAG00000009014) #21	C3orf33 (ENSSCAG00000008985) #22	PLCH1 (ENSSCAG00000008936) #23	MME (ENSSCAG00000008911) #25	DHX36 (ENSSCAG00000008892) #27	ARHGEF26 (ENSSCAG00000008816) #28	P2RY1 (ENSSCAG00000008798) #31	MBNL1 (ENSSCAG00000008785) #33	SUCNR1 (ENSSCAG00000008778) #34	AADAC (ENSSCAG00000008769) #35	IGSF10 (ENSSCAG00000008723) #37	P2RY12 (ENSSCAG00000008717)	P2RY13 (ENSSCAG00000008714)	GPR87 (ENSSCAG00000008711)	P2RY14 (ENSSCAG00000008704)	GPR171 (ENSSCAG00000008701)	CLRN1 (ENSSCAG00000008686)
Medium ground finch	MODERN SPECIES	12	MFSD1 (ENSGFOG00000012904)	RARRES1 (ENSGFOG00000012908)	ENSGFOG00000012911	GFM1 (ENSGFOG00000012913)	MLF1 (ENSGFOG00000012919)	ENSGFOG00000012925	VEPH1 (ENSGFOG00000012933) #11	PTX3 (ENSGFOG00000012963) #12	CCNL1 (ENSGFOG00000012965) #13	LEKR1 (ENSGFOG00000013001) #14	TIPARP (ENSGFOG00000013011) #16	SSR3 (ENSGFOG00000013018) #17	KCNAB1 (ENSGFOG00000013021) #18	GMPS (ENSGFOG00000013032) #20	SLC33A1 (ENSGFOG00000013063) #21	C3orf33 (ENSGFOG00000013072) #22	PLCH1 (ENSGFOG00000000177) #23	MME (ENSGFOG00000000194) #25	GPR149 (ENSGFOG00000000220) #26	DHX36 (ENSGFOG00000000241) #27	ARHGEF26 (ENSGFOG00000000262) #28	RAP2B (ENSGFOG00000000269) #29	ENSGFOG00000000274	P2RY1 (ENSGFOG00000000280) #31	MBNL1 (ENSGFOG00000000288) #33	SUCNR1 (ENSGFOG00000000303) #34	AADAC (ENSGFOG00000000310) #35	ENSGFOG00000000317 #37	P2RY12 (ENSGFOG00000000325)	P2RY13 (ENSGFOG00000000329)	GPR87 (ENSGFOG00000000331)
Flycatcher	MODERN SPECIES	28	ENSFALG00000025108	SHOX2 (ENSFALG00000004733) #9	ENSFALG00000025231	ENSFALG00000026953	ENSFALG00000024357	VEPH1 (ENSFALG00000004742) #11	PTX3 (ENSFALG00000024281) #12	CCNL1 (ENSFALG00000004760) #13	LEKR1 (ENSFALG00000004778) #14	ENSFALG00000027016	TIPARP (ENSFALG00000004781) #16	SSR3 (ENSFALG00000004786) #17	KCNAB1 (ENSFALG00000004804) #18	GMPS (ENSFALG00000004855) #20	SLC33A1 (ENSFALG00000004880) #21	C3orf33 (ENSFALG00000028770) #22	PLCH1 (ENSFALG00000004898) #23	MME (ENSFALG00000004943) #25	GPR149 (ENSFALG00000005032) #26	DHX36 (ENSFALG00000005045) #27	ARHGEF26 (ENSFALG00000005061) #28	RAP2B (ENSFALG00000014478) #29	P2RY1 (ENSFALG00000014494) #31	MBNL1 (ENSFALG00000005088) #33	SUCNR1 (ENSFALG00000028931) #34	ENSFALG00000024123	AADAC (ENSFALG00000005120) #35	ENSFALG00000027454 #37	ENSFALG00000005138 #37	P2RY12 (ENSFALG00000014524)	P2RY13 (ENSFALG00000005151)
Neognathae_c	ANCESTRAL SPECIES	13	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT01100000263515.a.b.a.a #12	ENSGT00390000018660 #11	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Golden eagle	MODERN SPECIES	1	LXN (ENSACCG00020001533)	GFM1 (ENSACCG00020001505)	ENSACCG00020001466	ENSACCG00020001412	SHOX2 (ENSACCG00020001394) #9	ENSACCG00020001370	PTX3 (ENSACCG00020001339) #12	VEPH1 (ENSACCG00020001324) #11	CCNL1 (ENSACCG00020001281) #13	LEKR1 (ENSACCG00020001243) #14	TIPARP (ENSACCG00020001217) #16	SSR3 (ENSACCG00020001198) #17	KCNAB1 (ENSACCG00020001172) #18	GMPS (ENSACCG00020001127) #20	SLC33A1 (ENSACCG00020001098) #21	C3orf33 (ENSACCG00020001078) #22	PLCH1 (ENSACCG00020001034) #23	ENSACCG00020001003	MME (ENSACCG00020000944) #25	GPR149 (ENSACCG00020000890) #26	DHX36 (ENSACCG00020000846) #27	ARHGEF26 (ENSACCG00020000809) #28	RAP2B (ENSACCG00020000788) #29	P2RY1 (ENSACCG00020000776) #31	MBNL1 (ENSACCG00020000739) #33	ENSACCG00020000688	SUCNR1 (ENSACCG00020000665) #34	AADAC (ENSACCG00020000652) #35	IGSF10 (ENSACCG00020000574) #37	P2RY12 (ENSACCG00020005071)	P2RY13 (ENSACCG00020005065)
African ostrich	MODERN SPECIES	390	RARRES1 (ENSSCUG00000002614)	LXN (ENSSCUG00000002613)	GFM1 (ENSSCUG00000002605)	MLF1 (ENSSCUG00000002592)	ENSSCUG00000002589	ENSSCUG00000002586	PTX3 (ENSSCUG00000002584) #12	VEPH1 (ENSSCUG00000002582) #11	CCNL1 (ENSSCUG00000002573) #13	LEKR1 (ENSSCUG00000002565) #14	ENSSCUG00000002561	TIPARP (ENSSCUG00000002559) #16	SSR3 (ENSSCUG00000002556) #17	GMPS (ENSSCUG00000002543) #20	SLC33A1 (ENSSCUG00000002533) #21	C3orf33 (ENSSCUG00000002525) #22	PLCH1 (ENSSCUG00000002520) #23	MME (ENSSCUG00000002517) #25
Australian saltwater crocodile	MODERN SPECIES	30	GFM1 (ENSCPRG00005007644)	MLF1 (ENSCPRG00005007594)	RSRC1 (ENSCPRG00005007591)	SHOX2 (ENSCPRG00005007578) #9	ENSCPRG00005007569	PTX3 (ENSCPRG00005007560) #12	VEPH1 (ENSCPRG00005007546) #11	CCNL1 (ENSCPRG00005007539) #13	LEKR1 (ENSCPRG00005007525) #14	ENSCPRG00005007521	TIPARP (ENSCPRG00005007501) #16	SSR3 (ENSCPRG00005007494) #17	KCNAB1 (ENSCPRG00005007460) #18	GMPS (ENSCPRG00005007269) #20	SLC33A1 (ENSCPRG00005007251) #21	C3orf33 (ENSCPRG00005007249) #22	PLCH1 (ENSCPRG00005007105) #23	MME (ENSCPRG00005007060) #25	GPR149 (ENSCPRG00005007044) #26	DHX36 (ENSCPRG00005007029) #27	ARHGEF26 (ENSCPRG00005007023) #28	RAP2B (ENSCPRG00005007004) #29	P2RY1 (ENSCPRG00005007002) #31	MBNL1 (ENSCPRG00005006983) #33	SUCNR1 (ENSCPRG00005006969) #34	AADAC (ENSCPRG00005006960) #35	IGSF10 (ENSCPRG00005006947) #37	P2RY12 (ENSCPRG00005006944)	P2RY13 (ENSCPRG00005006940)	GPR87 (ENSCPRG00005006938)	P2RY14 (ENSCPRG00005006934)
Cryptodira	ANCESTRAL SPECIES	16	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000165173	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B
Testudinoidea	ANCESTRAL SPECIES	9	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B
Emydidae	ANCESTRAL SPECIES	3	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
painted turtle	MODERN SPECIES	2423	MLF1 (ENSCPBG00000018371)	ENSCPBG00000018373	SHOX2 (ENSCPBG00000018375) #9	ENSCPBG00000018381	VEPH1 (ENSCPBG00000018387) #11	PTX3 (ENSCPBG00000018395) #12	CCNL1 (ENSCPBG00000018400) #13	LEKR1 (ENSCPBG00000018407) #14	TIPARP (ENSCPBG00000018420) #16	SSR3 (ENSCPBG00000018423) #17	KCNAB1 (ENSCPBG00000018428) #18	ENSCPBG00000018435 #19	ENSCPBG00000018447 #19	GMPS (ENSCPBG00000018525) #20	SLC33A1 (ENSCPBG00000018529) #21	C3orf33 (ENSCPBG00000018534) #22	PLCH1 (ENSCPBG00000018581) #23	MME (ENSCPBG00000018771) #25	GPR149 (ENSCPBG00000018780) #26	DHX36 (ENSCPBG00000018783) #27	ADAM20 (ENSCPBG00000018787)	ARHGEF26 (ENSCPBG00000018793) #28	ENSCPBG00000018802	P2RY1 (ENSCPBG00000018803) #31	MBNL1 (ENSCPBG00000018808) #33	SUCNR1 (ENSCPBG00000018811) #34	AADAC (ENSCPBG00000018813) #35	IGSF10 (ENSCPBG00000018816) #37	MED12L (ENSCPBG00000018827)	P2RY12 (ENSCPBG00000018838)	P2RY13 (ENSCPBG00000018839)
Three-toed box turtle	MODERN SPECIES	32	GFM1 (ENSTMTG00000003990)	MLF1 (ENSTMTG00000003966)	SHOX2 (ENSTMTG00000003924) #9	ENSTMTG00000003903	ENSTMTG00000003885	PTX3 (ENSTMTG00000003870) #12	CCNL1 (ENSTMTG00000003843) #13	LEKR1 (ENSTMTG00000003806) #14	ENSTMTG00000003797	TIPARP (ENSTMTG00000003776) #16	SSR3 (ENSTMTG00000003756) #17	KCNAB1 (ENSTMTG00000003735) #18	ENSTMTG00000003217 #19	GMPS (ENSTMTG00000003156) #20	SLC33A1 (ENSTMTG00000003141) #21	C3orf33 (ENSTMTG00000003126) #22	PLCH1 (ENSTMTG00000003000) #23	ENSTMTG00000002984	MME (ENSTMTG00000002970) #25	GPR149 (ENSTMTG00000002963) #26	DHX36 (ENSTMTG00000002945) #27	ENSTMTG00000002939	ARHGEF26 (ENSTMTG00000002930) #28	RAP2B (ENSTMTG00000002923) #29	P2RY1 (ENSTMTG00000002918) #31	MBNL1 (ENSTMTG00000002899) #33	SUCNR1 (ENSTMTG00000002889) #34	AADAC (ENSTMTG00000002883) #35	IGSF10 (ENSTMTG00000002805) #37	P2RY12 (ENSTMTG00000002791)	P2RY13 (ENSTMTG00000002784)
Testudinidae	ANCESTRAL SPECIES	7	ENSGT00390000005023.b	ENSGT00940000164641	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT00440000037505.a	ENSGT01060000248592.E	ENSGT01060000248592.B
Abingdon island giant tortoise	MODERN SPECIES	1249												KCNAB1 (ENSCABG00000002069) #18	ENSCABG00000002066 #19	GMPS (ENSCABG00000002041) #20	SLC33A1 (ENSCABG00000002009) #21	C3orf33 (ENSCABG00000001981) #22	PLCH1 (ENSCABG00000001970) #23	ENSCABG00000001967	MME (ENSCABG00000001963) #25	GPR149 (ENSCABG00000001959) #26	DHX36 (ENSCABG00000000855) #27	ENSCABG00000000799	ARHGEF26 (ENSCABG00000000792) #28	RAP2B (ENSCABG00000000777) #29	P2RY1 (ENSCABG00000000774) #31	MBNL1 (ENSCABG00000000760) #33	SUCNR1 (ENSCABG00000000751) #34
Goode s thornscrub tortoise	MODERN SPECIES	23	MLF1 (ENSGEVG00005007034)	ENSGEVG00005007057	SHOX2 (ENSGEVG00005007084) #9	ENSGEVG00005007142	ENSGEVG00005007163 #11	PTX3 (ENSGEVG00005007195) #12	CCNL1 (ENSGEVG00005007228) #13	LEKR1 (ENSGEVG00005007259) #14	ENSGEVG00005007292	TIPARP (ENSGEVG00005007304) #16	SSR3 (ENSGEVG00005007317) #17	KCNAB1 (ENSGEVG00005007345) #18	ENSGEVG00005007450 #19	GMPS (ENSGEVG00005007539) #20	SLC33A1 (ENSGEVG00005007570) #21	C3orf33 (ENSGEVG00005007608) #22	PLCH1 (ENSGEVG00005007682) #23	ENSGEVG00005007858	MME (ENSGEVG00005007888) #25	GPR149 (ENSGEVG00005008015) #26	DHX36 (ENSGEVG00005008060) #27	ARHGEF26 (ENSGEVG00005008115) #28	RAP2B (ENSGEVG00005008169) #29	P2RY1 (ENSGEVG00005008183) #31	MBNL1 (ENSGEVG00005008219) #33	SUCNR1 (ENSGEVG00005008269) #34	AADAC (ENSGEVG00005008292) #35	IGSF10 (ENSGEVG00005008410) #37	MED12L (ENSGEVG00005008629)	P2RY13 (ENSGEVG00005008753)	GPR87 (ENSGEVG00005008779)
Chinese turtle	MODERN SPECIES	1130	SHOX2 (ENSPSIG00000004319) #9	ENSPSIG00000004391	VEPH1 (ENSPSIG00000004402) #11	PTX3 (ENSPSIG00000004651) #12	ENSPSIG00000004707	CCNL1 (ENSPSIG00000004759) #13	LEKR1 (ENSPSIG00000005103) #14	ENSPSIG00000005121	ENSPSIG00000005143	TIPARP (ENSPSIG00000005160) #16	SSR3 (ENSPSIG00000005346) #17	KCNAB1 (ENSPSIG00000005640) #18	ENSPSIG00000007102 #19	GMPS (ENSPSIG00000007196) #20	SLC33A1 (ENSPSIG00000008579) #21	C3orf33 (ENSPSIG00000008805) #22	PLCH1 (ENSPSIG00000008812) #23	MME (ENSPSIG00000010434) #25	ENSPSIG00000000971	GPR149 (ENSPSIG00000012627) #26	DHX36 (ENSPSIG00000012755) #27	ENSPSIG00000012875	ARHGEF26 (ENSPSIG00000012932) #28
Lepidosauria	ANCESTRAL SPECIES	12	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Episquamata	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00940000178902	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b.d	ENSGT00950000183207.b.c.b.c.b	ENSGT00950000183207.b.c.b.c.a	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37
Elapidae_a	ANCESTRAL SPECIES		ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b.d	ENSGT00950000183207.b.c.b.c.b	ENSGT00950000183207.b.c.b.c.a	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000164154	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00940000175614	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b.d	ENSGT00950000183207.b.c.b.c.b	ENSGT00950000183207.b.c.b.c.a	ENSGT00940000156745 #25	ENSGT00990000212711	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35
Eastern brown snake	MODERN SPECIES	29	ENSPTXG00000013541	RSRC1 (ENSPTXG00000013543)	SHOX2 (ENSPTXG00000013546) #9	ENSPTXG00000013547	ENSPTXG00000013548 #11	PTX3 (ENSPTXG00000013549) #12	CCNL1 (ENSPTXG00000013550) #13	ENSPTXG00000013552 #14	ENSPTXG00000013553	TIPARP (ENSPTXG00000013554) #16	SSR3 (ENSPTXG00000013556) #17	KCNAB1 (ENSPTXG00000013558) #18	ENSPTXG00000013560 #19	GMPS (ENSPTXG00000013562) #20	SLC33A1 (ENSPTXG00000013564) #21	C3orf33 (ENSPTXG00000013565) #22	PLCH1 (ENSPTXG00000013567) #23	ENSPTXG00000013568	ENSPTXG00000013569
Mainland tiger snake	MODERN SPECIES		MLF1 (ENSNSUG00000018827)	SHOX2 (ENSNSUG00000018826) #9	ENSNSUG00000018825	ENSNSUG00000018824 #11	PTX3 (ENSNSUG00000018823) #12	CCNL1 (ENSNSUG00000018821) #13	ENSNSUG00000018820 #14	ENSNSUG00000018819	TIPARP (ENSNSUG00000018818) #16	SSR3 (ENSNSUG00000018817) #17	KCNAB1 (ENSNSUG00000018814) #18	ENSNSUG00000018586 #19	GMPS (ENSNSUG00000018581) #20	SLC33A1 (ENSNSUG00000018579) #21	ENSNSUG00000018578	C3orf33 (ENSNSUG00000018576) #22	PLCH1 (ENSNSUG00000018574) #23	ENSNSUG00000018573	ENSNSUG00000018572	ENSNSUG00000018570	ENSNSUG00000018567	MME (ENSNSUG00000018560) #25	ENSNSUG00000018558	GPR149 (ENSNSUG00000018557) #26	DHX36 (ENSNSUG00000018534) #27	ARHGEF26 (ENSNSUG00000018513) #28	RAP2B (ENSNSUG00000018512) #29	P2RY1 (ENSNSUG00000018511) #31	MBNL1 (ENSNSUG00000018510) #33	SUCNR1 (ENSNSUG00000018508) #34	AADAC (ENSNSUG00000018506) #35
Blue-lipped sea krait	MODERN SPECIES	7544																ENSLLTG00000005403 #22
Indian cobra	MODERN SPECIES	3	RSRC1 (ENSNNAG00000004026)	SHOX2 (ENSNNAG00000003957) #9	ENSNNAG00000003943	ENSNNAG00000003910	PTX3 (ENSNNAG00000003894) #12	CCNL1 (ENSNNAG00000003834) #13	ENSNNAG00000003816	ENSNNAG00000003789	TIPARP (ENSNNAG00000003776) #16	SSR3 (ENSNNAG00000003750) #17	KCNAB1 (ENSNNAG00000003738) #18	ENSNNAG00000003709 #18	ENSNNAG00000003654 #19	GMPS (ENSNNAG00000003593) #20	SLC33A1 (ENSNNAG00000003569) #21	C3orf33 (ENSNNAG00000003552) #22	PLCH1 (ENSNNAG00000003522) #23	ENSNNAG00000003510	ENSNNAG00000003501	ENSNNAG00000003480	ENSNNAG00000003459	MME (ENSNNAG00000003372) #25	GPR149 (ENSNNAG00000003351) #26	DHX36 (ENSNNAG00000003262) #27	ARHGEF26 (ENSNNAG00000003235) #28	RAP2B (ENSNNAG00000003226) #29	P2RY1 (ENSNNAG00000003197) #31	MBNL1 (ENSNNAG00000003111) #33	SUCNR1 (ENSNNAG00000003061) #34	AADAC (ENSNNAG00000014973) #35	ENSNNAG00000014963 #37
Lizard	MODERN SPECIES	2	PTX3 (ENSACAG00000039556) #12	ENSACAG00000039237	ENSACAG00000044882	CCNL1 (ENSACAG00000001547) #13	LEKR1 (ENSACAG00000023624) #14	TIPARP (ENSACAG00000001488) #16	SSR3 (ENSACAG00000040361) #17	ENSACAG00000028304	KCNAB1 (ENSACAG00000000831) #18	ENSACAG00000045220	ENSACAG00000029010	ENSACAG00000036237	ENSACAG00000000779 #19	GMPS (ENSACAG00000000556) #20	SLC33A1 (ENSACAG00000000483) #21	C3orf33 (ENSACAG00000039040) #22	PLCH1 (ENSACAG00000004239) #23	ENSACAG00000042678	ENSACAG00000004167	MME (ENSACAG00000003903) #25	ENSACAG00000040679	GPR149 (ENSACAG00000006974) #26	DHX36 (ENSACAG00000006905) #27	ARHGEF26 (ENSACAG00000006849) #28	RAP2B (ENSACAG00000011260) #29	P2RY1 (ENSACAG00000011271) #31	MBNL1 (ENSACAG00000029116) #33	SUCNR1 (ENSACAG00000029121) #34	AADAC (ENSACAG00000008002) #35	IGSF10 (ENSACAG00000007981) #37	ENSACAG00000007814
Laterata	ANCESTRAL SPECIES		ENSGT00530000063813.b	ENSGT00550000074911	ENSGT00390000005023.b	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368 #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT01030000235172	ENSGT00950000183207.b.c.b	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B
Common wall lizard	MODERN SPECIES	13	MLF1 (ENSPMRG00000003927)	RSRC1 (ENSPMRG00000003920)	SHOX2 (ENSPMRG00000003913) #9	ENSPMRG00000003907	ENSPMRG00000003905	PTX3 (ENSPMRG00000010050) #12	VEPH1 (ENSPMRG00000010035) #11	LEKR1 (ENSPMRG00000010016) #14	TIPARP (ENSPMRG00000009998) #16	SSR3 (ENSPMRG00000009989) #17	ENSPMRG00000009983	KCNAB1 (ENSPMRG00000009966) #18	ENSPMRG00000009953 #19	GMPS (ENSPMRG00000009928) #20	SLC33A1 (ENSPMRG00000009920) #21	C3orf33 (ENSPMRG00000009919) #22	PLCH1 (ENSPMRG00000009890) #23	ENSPMRG00000009875	ENSPMRG00000009866	MME (ENSPMRG00000009855) #25	GPR149 (ENSPMRG00000009850) #26	DHX36 (ENSPMRG00000009836) #27	ARHGEF26 (ENSPMRG00000009827) #28	RAP2B (ENSPMRG00000009822) #29	P2RY1 (ENSPMRG00000009816) #31	ENSPMRG00000009811	MBNL1 (ENSPMRG00000009794) #33	ENSPMRG00000009779	SUCNR1 (ENSPMRG00000009774) #34	AADAC (ENSPMRG00000009763) #35	IGSF10 (ENSPMRG00000009740) #37
Argentine black and white tegu	MODERN SPECIES	21	LXN (ENSSMRG00000001436)	MLF1 (ENSSMRG00000001439)	RSRC1 (ENSSMRG00000001470)	SHOX2 (ENSSMRG00000001482) #9	VEPH1 (ENSSMRG00000001521) #11	PTX3 (ENSSMRG00000001575) #12	CCNL1 (ENSSMRG00000001583) #13	LEKR1 (ENSSMRG00000001605) #14	ENSSMRG00000001629	TIPARP (ENSSMRG00000001646) #16	SSR3 (ENSSMRG00000001650) #17	KCNAB1 (ENSSMRG00000001682) #18	ENSSMRG00000002028 #19	GMPS (ENSSMRG00000003393) #20	SLC33A1 (ENSSMRG00000003412) #21	C3orf33 (ENSSMRG00000003415) #22	PLCH1 (ENSSMRG00000003423) #23	ENSSMRG00000003436	ENSSMRG00000003439	MME (ENSSMRG00000003452) #25	GPR149 (ENSSMRG00000003478) #26	DHX36 (ENSSMRG00000003496) #27	ARHGEF26 (ENSSMRG00000003502) #28	RAP2B (ENSSMRG00000003512) #29	P2RY1 (ENSSMRG00000003521) #31	MBNL1 (ENSSMRG00000003536) #33	SUCNR1 (ENSSMRG00000003560) #34	AADAC (ENSSMRG00000003580) #35	IGSF10 (ENSSMRG00000003584) #37	MED12L (ENSSMRG00000003588)	P2RY12 (ENSSMRG00000004783)
tuatara	MODERN SPECIES	1215					ENSSPUG00000015823	PTX3 (ENSSPUG00000015818) #12	VEPH1 (ENSSPUG00000015803) #11	CCNL1 (ENSSPUG00000015793) #13	LEKR1 (ENSSPUG00000015780) #14	TIPARP (ENSSPUG00000015764) #16	SSR3 (ENSSPUG00000015748) #17	KCNAB1 (ENSSPUG00000015736) #18	ENSSPUG00000015567 #19	ENSSPUG00000015523 #20	SLC33A1 (ENSSPUG00000015504) #21	C3orf33 (ENSSPUG00000015495) #22	PLCH1 (ENSSPUG00000015450) #23	ENSSPUG00000015438	MME (ENSSPUG00000015405) #25
Anura	ANCESTRAL SPECIES	13	ENSGT00730000111251	ENSGT00940000154287.b #9	ENSGT00940000163939	ENSGT00390000018660 #11	ENSGT01100000263515.a.b.a.a #12	ENSGT00940000169328.a.a	ENSGT00940000159135 #13	ENSGT00940000162647 #14	ENSGT00940000155368.md #16	ENSGT00390000000970 #17	ENSGT00940000156760 #18	ENSGT00940000160473 #19	ENSGT01100000263565.b.b	ENSGT00390000006591 #20	ENSGT00940000154019.a #21	ENSGT00390000004493 #22	ENSGT00940000157185 #23	ENSGT00940000156745 #25	ENSGT00390000003715 #26	ENSGT00940000156903 #27	ENSGT01030000234571.a.a #28	ENSGT00940000160283 #29	ENSGT01030000234621.B #31	ENSGT00950000182897.B.a.a #33	ENSGT01030000234621.A #34	ENSGT01100000263536.B.d	ENSGT00940000155975 #35	ENSGT00940000158290 #37	ENSGT01060000248592.E	ENSGT01060000248592.B	ENSGT01060000248592.D
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000013793	ENSLLEG00000013711	CCNL1 (ENSLLEG00000013395) #13	ENSLLEG00000013369	LEKR1 (ENSLLEG00000012851) #14	TIPARP (ENSLLEG00000012757) #16	ENSLLEG00000012737	SSR3 (ENSLLEG00000012692) #17	ENSLLEG00000012674	KCNAB1 (ENSLLEG00000012432) #18	ENSLLEG00000012374	ENSLLEG00000012287 #19	ENSLLEG00000010956	GMPS (ENSLLEG00000010429) #20	SLC33A1 (ENSLLEG00000010196) #21	C3orf33 (ENSLLEG00000010088) #22	PLCH1 (ENSLLEG00000009486) #23	ENSLLEG00000009362	ENSLLEG00000009341	GPR149 (ENSLLEG00000009282) #26	DHX36 (ENSLLEG00000008869) #27	ARHGEF26 (ENSLLEG00000008442) #28	ENSLLEG00000008368	ENSLLEG00000008321	RAP2B (ENSLLEG00000008271) #29	ENSLLEG00000008254	ENSLLEG00000008230	ENSLLEG00000008215	ENSLLEG00000008194	ENSLLEG00000008146	ENSLLEG00000008112