Euarchontoglires_A	ANCESTRAL SPECIES	19	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.s.a ##19	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00940000161506 #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00730000111514	ENSGT00730000111571
Glires	ANCESTRAL SPECIES	20	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.s.a ##19	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00940000161506 #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00730000111514	ENSGT00730000111571
Rodentia	ANCESTRAL SPECIES	19	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.s.a ##19	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506 #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332
Rodentia_B	ANCESTRAL SPECIES	17	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506 #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332	ENSGT00730000111514
Myomorpha	ANCESTRAL SPECIES	18	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506 #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332	ENSGT00730000111514
Muroidea	ANCESTRAL SPECIES	14	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506 #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332	ENSGT00730000111514
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.g ##30	ENSGT00940000161506.h #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00950000183014.f.b.a.a.s.a ##19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.g ##30	ENSGT00940000161506.h #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.g ##30	ENSGT00940000159966.B	ENSGT00940000161506.h #30	ENSGT00520000061332	ENSGT00730000111514	ENSGT00730000111571
Golden Hamster	MODERN SPECIES	828	BC024139 (ENSMAUG00000020348) #7	Nrbp2 (ENSMAUG00000003416) #8	ENSMAUG00000014267 #9	ENSMAUG00000012655 #10	Iqank1 (ENSMAUG00000020827) #11	Fam83h (ENSMAUG00000018667) #12	Mapk15 (ENSMAUG00000015444) #13	ENSMAUG00000017254 #14	Zfp707 (ENSMAUG00000019306) #15	Gfus (ENSMAUG00000011454) #16	Pycrl (ENSMAUG00000018085) #17	Tigd5 (ENSMAUG00000005967) #18	ENSMAUG00000000730 #19	Mroh6 (ENSMAUG00000017993) #20	Gsdmd (ENSMAUG00000010559) #21	Zc3h3 (ENSMAUG00000011009) #22	Rhpn1 (ENSMAUG00000012757) #23	Top1mt (ENSMAUG00000021425) #24	Gpihbp1 (ENSMAUG00000020734) #25	Ly6h (ENSMAUG00000017401) #26	Ly6l (ENSMAUG00000008061) #27	ENSMAUG00000014385 #28	Ly6m (ENSMAUG00000003450) #29	ENSMAUG00000012477 #30
Chinese hamster chok1gshd	MODERN SPECIES	1	Puf60 (ENSCGRG00001017442) #9	Scrib (ENSCGRG00001018290)	Iqank1 (ENSCGRG00001015411) #11	Fam83h (ENSCGRG00001013512) #12	Mapk15 (ENSCGRG00001013199) #13	ENSCGRG00001017466 #14	Zfp707 (ENSCGRG00001017122) #15	Zfp623 (ENSCGRG00001009589)	Gfus (ENSCGRG00001015305) #16	Pycrl (ENSCGRG00001022822) #17	Tigd5 (ENSCGRG00001010766) #18	Eef1d (ENSCGRG00001014276) #19	Naprt (ENSCGRG00001013665)	Mroh6 (ENSCGRG00001013151) #20	Gsdmd (ENSCGRG00001012963) #21	Zc3h3 (ENSCGRG00001016268) #22	Rhpn1 (ENSCGRG00001008904) #23	Top1mt (ENSCGRG00001013641) #24	ENSCGRG00001013239	Zfp41 (ENSCGRG00001009367)	Gpihbp1 (ENSCGRG00001020841) #25	Ly6h (ENSCGRG00001020640) #26	Ly6l (ENSCGRG00001013702) #27	ENSCGRG00001012836 #27	Ly6e (ENSCGRG00001013220) #28	Ly6m (ENSCGRG00001013038) #29	Cyp11b2 (ENSCGRG00001013624) ##30	Ly6k (ENSCGRG00001021995)	Cyp11b1 (ENSCGRG00001022151) #30	ENSCGRG00001013496	Ly6g6g (ENSCGRG00001013227)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.s.a ##19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.g ##30	ENSGT00940000161506.h #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332
Prairie vole	MODERN SPECIES	2	Nrbp2 (ENSMOCG00000002147) #8	Puf60 (ENSMOCG00000018780) #9	Scrib (ENSMOCG00000011374)	Iqank1 (ENSMOCG00000004464) #11	Fam83h (ENSMOCG00000007730) #12	Mapk15 (ENSMOCG00000011658) #13	ENSMOCG00000019019 #14	Zfp707 (ENSMOCG00000017775) #15	Zfp623 (ENSMOCG00000014910)	Gfus (ENSMOCG00000008645) #16	Pycrl (ENSMOCG00000006633) #17	Tigd5 (ENSMOCG00000004161) #18	ENSMOCG00000010950 ##19	Naprt (ENSMOCG00000017024)	Mroh6 (ENSMOCG00000011231) #20	Zc3h3 (ENSMOCG00000000733) #22	Mafa (ENSMOCG00000021750)	Rhpn1 (ENSMOCG00000001034) #23	Top1mt (ENSMOCG00000014699) #24	ENSMOCG00000004387	Zfp41 (ENSMOCG00000008888)	Gpihbp1 (ENSMOCG00000004404) #25	Ly6h (ENSMOCG00000006704) #26	Ly6l (ENSMOCG00000001807) #27	ENSMOCG00000018112	Ly6e (ENSMOCG00000021450) #28	Ly6m (ENSMOCG00000018758) #29	Cyp11b2 (ENSMOCG00000001733) ##30	Cyp11b1 (ENSMOCG00000020170) #30	ENSMOCG00000015409	ENSMOCG00000008187
Northern American deer mouse	MODERN SPECIES	12	Puf60 (ENSPEMG00000008820) #9	Scrib (ENSPEMG00000011210)	Iqank1 (ENSPEMG00000016003) #11	Fam83h (ENSPEMG00000025375) #12	Mapk15 (ENSPEMG00000002190) #13	ENSPEMG00000031059 #14	Zfp707 (ENSPEMG00000010804) #15	Zfp623 (ENSPEMG00000011533)	Gfus (ENSPEMG00000018796) #16	Pycrl (ENSPEMG00000008129) #17	Tigd5 (ENSPEMG00000006475) #18	Eef1d (ENSPEMG00000012989) ##19	Naprt (ENSPEMG00000001062)	Mroh6 (ENSPEMG00000009446) #20	ENSPEMG00000015784 #21	Zc3h3 (ENSPEMG00000013893) #22	Rhpn1 (ENSPEMG00000014071) #23	Top1mt (ENSPEMG00000012997) #24	ENSPEMG00000025643	Zfp41 (ENSPEMG00000030065)	Gpihbp1 (ENSPEMG00000014054) #25	Ly6h (ENSPEMG00000029128) #26	ENSPEMG00000025986	Ly6l (ENSPEMG00000019007) #27	ENSPEMG00000028943 #27	Ly6e (ENSPEMG00000030435) #28	Ly6m (ENSPEMG00000006943) #29	Cyp11b2 (ENSPEMG00000009946) ##30	Cyp11b1 (ENSPEMG00000010313) #30	ENSPEMG00000009436	Ly6k (ENSPEMG00000017865)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a.b #27	ENSGT00940000154560.a.a.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.g ##30	ENSGT00940000161506.h #30	ENSGT00940000159966.A	ENSGT00940000159966.B
Mus	ANCESTRAL SPECIES	11	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a.a.a.a.b #27	ENSGT00940000154560.a.a.a.a.a.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.g ##30	ENSGT00940000161506.h #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a.b #27	ENSGT00940000154560.a.a.a.a.a.a.a.a #27	ENSGT00940000154560.a.a.a.a.a.b #27	ENSGT00940000154560.a.a.a.b #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.g ##30	ENSGT00940000161506.h #30	ENSGT00940000159966.A.p
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a.b #27	ENSGT00940000154560.a.a.a.a.a.a.a.a #27	ENSGT00940000154560.a.a.a.a.a.b #27	ENSGT00940000154560.a.a.a.b.a #27	ENSGT00940000154560.a.a.a.a.a.a.a.b #27	ENSGT00940000154560.a.a.a.b.b #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.g ##30
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a.b #27	ENSGT00940000154560.a.a.a.a.a.a.a.a #27	ENSGT00940000154560.a.a.a.a.a.b #27	ENSGT00940000154560.a.a.a.b.a #27	ENSGT00940000154560.a.a.a.a.a.a.a.b #27	ENSGT00940000154560.a.a.a.b.b #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29
spretus	MODERN SPECIES	6	Puf60 (MGP_SPRETEiJ_G0020812) #9	Scrib (MGP_SPRETEiJ_G0020811)	MGP_SPRETEiJ_G0020810 #11	Fam83h (MGP_SPRETEiJ_G0020809) #12	Mapk15 (MGP_SPRETEiJ_G0020808) #13	Ccdc166 (MGP_SPRETEiJ_G0020807)	Zfp707 (MGP_SPRETEiJ_G0020806) #15	Zfp623 (MGP_SPRETEiJ_G0020805)	MGP_SPRETEiJ_G0020804 #16	Pycrl (MGP_SPRETEiJ_G0020803) #17	Tigd5 (MGP_SPRETEiJ_G0020802) #18	Eef1d (MGP_SPRETEiJ_G0020801) #19	Naprt (MGP_SPRETEiJ_G0020800)	Mroh6 (MGP_SPRETEiJ_G0020799) #20	Gsdmd (MGP_SPRETEiJ_G0020798) #21	Zc3h3 (MGP_SPRETEiJ_G0020797) #22	Mafa (MGP_SPRETEiJ_G0020796)	Rhpn1 (MGP_SPRETEiJ_G0020795) #23	Top1mt (MGP_SPRETEiJ_G0020794) #24	Zfp41 (MGP_SPRETEiJ_G0020793)	Gpihbp1 (MGP_SPRETEiJ_G0020792) #25	Ly6h (MGP_SPRETEiJ_G0020791) #26	Ly6l (MGP_SPRETEiJ_G0020790) #27	MGP_SPRETEiJ_G0020789	Ly6g2 (MGP_SPRETEiJ_G0020788) #27	MGP_SPRETEiJ_G0020787 #27	MGP_SPRETEiJ_G0020785 #27	Ly6e (MGP_SPRETEiJ_G0020784) #28	Ly6m (MGP_SPRETEiJ_G0020783) #29	Gml (MGP_SPRETEiJ_G0020782)	Gml2 (MGP_SPRETEiJ_G0020781)
Steppe mouse	MODERN SPECIES	2988	Nrbp2 (ENSMSIG00000022514) #8	Puf60 (ENSMSIG00000022454) #9	ENSMSIG00000021768	Fam83h (ENSMSIG00000021720) #12	Mapk15 (ENSMSIG00000021708) #13	ENSMSIG00000021702 #14	Zfp707 (ENSMSIG00000021670) #15	Zfp623 (ENSMSIG00000021664)	ENSMSIG00000021506 #16	Pycrl (ENSMSIG00000021499) #17	Tigd5 (ENSMSIG00000021495) #18	Eef1d (ENSMSIG00000021333) #19	Naprt (ENSMSIG00000021307)	Mroh6 (ENSMSIG00000021287) #20	Gsdmd (ENSMSIG00000021268) #21	Zc3h3 (ENSMSIG00000021237) #22	Mafa (ENSMSIG00000021226)	Rhpn1 (ENSMSIG00000021180) #23	Top1mt (ENSMSIG00000021154) #24	ENSMSIG00000021147	Zfp41 (ENSMSIG00000021141)	Gpihbp1 (ENSMSIG00000021118) #25	Ly6h (ENSMSIG00000021100) #26	Ly6l (ENSMSIG00000021075) #27
Mouse	MODERN SPECIES	6	Puf60 (ENSMUSG00000002524) #9	Scrib (ENSMUSG00000022568)	Iqank1 (ENSMUSG00000102018) #11	Fam83h (ENSMUSG00000046761) #12	Mapk15 (ENSMUSG00000063704) #13	Ccdc166 (ENSMUSG00000098176)	Zfp707 (ENSMUSG00000034429) #15	Zfp623 (ENSMUSG00000050846)	Gfus (ENSMUSG00000022570) #16	Pycrl (ENSMUSG00000022571) #17	Tigd5 (ENSMUSG00000103906) #18	Eef1d (ENSMUSG00000055762) #19	Naprt (ENSMUSG00000022574)	Mroh6 (ENSMUSG00000098678) #20	Gsdmd (ENSMUSG00000022575) #21	Zc3h3 (ENSMUSG00000075600) #22	Mafa (ENSMUSG00000047591)	Rhpn1 (ENSMUSG00000022580) #23	Top1mt (ENSMUSG00000000934) #24	Zfp41 (ENSMUSG00000047003)	Gpihbp1 (ENSMUSG00000022579) #25	Ly6h (ENSMUSG00000022577) #26	Ly6l (ENSMUSG00000093626) #27	Ly6f (ENSMUSG00000022583) #27	Ly6g2 (ENSMUSG00000047728) #27	Ly6g (ENSMUSG00000022582) #27	Ly6c2 (ENSMUSG00000022584) #27	Ly6c1 (ENSMUSG00000079018) #27	Ly6a (ENSMUSG00000075602) #27	Ly6i (ENSMUSG00000022586) #27	Ly6e (ENSMUSG00000022587) #28
Ryukyu mouse	MODERN SPECIES	6	BC024139 (MGP_CAROLIEiJ_G0019912) #7	Nrbp2 (MGP_CAROLIEiJ_G0019911) #8	Puf60 (MGP_CAROLIEiJ_G0019910) #9	Scrib (MGP_CAROLIEiJ_G0019909)	MGP_CAROLIEiJ_G0019908 #11	Fam83h (MGP_CAROLIEiJ_G0019907) #12	Mapk15 (MGP_CAROLIEiJ_G0019906) #13	Zfp623 (MGP_CAROLIEiJ_G0019905)	MGP_CAROLIEiJ_G0019904 #16	Pycrl (MGP_CAROLIEiJ_G0019903) #17	Tigd5 (MGP_CAROLIEiJ_G0019902) #18	Eef1d (MGP_CAROLIEiJ_G0019901) #19	Naprt (MGP_CAROLIEiJ_G0019900)	Mroh6 (MGP_CAROLIEiJ_G0019899) #20	Gsdmd (MGP_CAROLIEiJ_G0019898) #21	Zc3h3 (MGP_CAROLIEiJ_G0019897) #22	Mafa (MGP_CAROLIEiJ_G0019896)	Rhpn1 (MGP_CAROLIEiJ_G0019895) #23	Top1mt (MGP_CAROLIEiJ_G0019894) #24	Zfp41 (MGP_CAROLIEiJ_G0019893)	Gpihbp1 (MGP_CAROLIEiJ_G0019892) #25	Ly6h (MGP_CAROLIEiJ_G0019891) #26	Ly6g2 (MGP_CAROLIEiJ_G0019890) #27	MGP_CAROLIEiJ_G0019888 #27	MGP_CAROLIEiJ_G0019887 #27	Ly6e (MGP_CAROLIEiJ_G0019886) #28	Ly6m (MGP_CAROLIEiJ_G0019885) #29	MGP_CAROLIEiJ_G0019884 ##30	Cyp11b1 (MGP_CAROLIEiJ_G0019883) #30	MGP_CAROLIEiJ_G0019882	MGP_CAROLIEiJ_G0019881
Shrew mouse	MODERN SPECIES	8	Puf60 (MGP_PahariEiJ_G0019920) #9	Scrib (MGP_PahariEiJ_G0019919)	MGP_PahariEiJ_G0019918 #11	Fam83h (MGP_PahariEiJ_G0019917) #12	Mapk15 (MGP_PahariEiJ_G0019916) #13	Ccdc166 (MGP_PahariEiJ_G0019915)	Zfp707 (MGP_PahariEiJ_G0019914) #15	Zfp623 (MGP_PahariEiJ_G0019913)	MGP_PahariEiJ_G0019912 #16	Pycrl (MGP_PahariEiJ_G0019911) #17	Tigd5 (MGP_PahariEiJ_G0019910) #18	Eef1d (MGP_PahariEiJ_G0019909) #19	Naprt (MGP_PahariEiJ_G0019908)	Mroh6 (MGP_PahariEiJ_G0019907) #20	Gsdmd (MGP_PahariEiJ_G0019906) #21	Zc3h3 (MGP_PahariEiJ_G0019905) #22	Mafa (MGP_PahariEiJ_G0019904)	Rhpn1 (MGP_PahariEiJ_G0019903) #23	Top1mt (MGP_PahariEiJ_G0019902) #24	Zfp41 (MGP_PahariEiJ_G0019901)	Gpihbp1 (MGP_PahariEiJ_G0019900) #25	Ly6h (MGP_PahariEiJ_G0019899) #26	MGP_PahariEiJ_G0019898 #27	Ly6g (MGP_PahariEiJ_G0019897) #27	MGP_PahariEiJ_G0019896 #27	Ly6e (MGP_PahariEiJ_G0019893) #28	Ly6m (MGP_PahariEiJ_G0019892) #29	MGP_PahariEiJ_G0019891 ##30	Cyp11b1 (MGP_PahariEiJ_G0019890) #30	MGP_PahariEiJ_G0019888	MGP_PahariEiJ_G0019887
Rat	MODERN SPECIES	17	Nrbp2 (ENSRNOG00000029535) #8	Puf60 (ENSRNOG00000009960) #9	Scrib (ENSRNOG00000032574)	Iqank1 (ENSRNOG00000063360) #11	Fam83h (ENSRNOG00000030264) #12	Mapk15 (ENSRNOG00000009336) #13	Ccdc166 (ENSRNOG00000047521) #14	Zfp707l1 (ENSRNOG00000057901) #15	Zfp623 (ENSRNOG00000009302)	Gfus (ENSRNOG00000009020) #16	Tigd5 (ENSRNOG00000008686)	Pycr3 (ENSRNOG00000021638) #19	Naprt (ENSRNOG00000007939)	Mroh6 (ENSRNOG00000032231) #20	Gsdmd (ENSRNOG00000007728) #21	Zc3h3 (ENSRNOG00000007684) #22	Mafa (ENSRNOG00000007668)	Rhpn1 (ENSRNOG00000007597) #23	Top1mt (ENSRNOG00000007500) #24	Gli4 (ENSRNOG00000021765)	Zfp41 (ENSRNOG00000007489)	Gpihbp1 (ENSRNOG00000064680) #25	Ly6h (ENSRNOG00000007334) #26	Ly6al (ENSRNOG00000037374) #27	Ly6l (ENSRNOG00000048148) #27	Ly6i (ENSRNOG00000007137) #27	LOC300024 (ENSRNOG00000048850) #27	RGD1565410 (ENSRNOG00000037375) #27	ENSRNOG00000070877 #27	Ly6c (ENSRNOG00000061813) #27	Ly6e (ENSRNOG00000007091) #28
Upper Galilee mountains blind mole rat	MODERN SPECIES	887	Plec (ENSNGAG00000008931)	BC024139 (ENSNGAG00000018326) #7	Nrbp2 (ENSNGAG00000017478) #8	Puf60 (ENSNGAG00000000712) #9	Scrib (ENSNGAG00000020420)	Fam83h (ENSNGAG00000020634) #12	Mapk15 (ENSNGAG00000013212) #13	ENSNGAG00000022071 #14	Zfp707 (ENSNGAG00000008924) #15	Gfus (ENSNGAG00000016673) #16	Pycrl (ENSNGAG00000020709) #17	Tigd5 (ENSNGAG00000016409) #18	Eef1d (ENSNGAG00000020992) #19	Naprt (ENSNGAG00000024126)	Gsdmd (ENSNGAG00000010971) #21	Zc3h3 (ENSNGAG00000008574) #22	Mafa (ENSNGAG00000000584)	Rhpn1 (ENSNGAG00000022376) #23	Top1mt (ENSNGAG00000000704) #24
Lesser Egyptian jerboa	MODERN SPECIES	59	Nrbp2 (ENSJJAG00000015418) #8	Puf60 (ENSJJAG00000001076) #9	Scrib (ENSJJAG00000016202)	Iqank1 (ENSJJAG00000022777) #11	Fam83h (ENSJJAG00000021217) #12	Mapk15 (ENSJJAG00000001348) #13	ENSJJAG00000024374 #14	Zfp707 (ENSJJAG00000015665) #15	Gfus (ENSJJAG00000015612) #16	Pycrl (ENSJJAG00000006190) #17	Tigd5 (ENSJJAG00000018444) #18	Eef1d (ENSJJAG00000012433) #19	Naprt (ENSJJAG00000023431)	Mroh6 (ENSJJAG00000021126) #20	Gsdmd (ENSJJAG00000014659) #21	Zc3h3 (ENSJJAG00000023757) #22	Mafa (ENSJJAG00000009961)	Rhpn1 (ENSJJAG00000019332) #23	Zfp41 (ENSJJAG00000021551)	Gpihbp1 (ENSJJAG00000014382) #25	Ly6h (ENSJJAG00000003342) #26	Ly6l (ENSJJAG00000024262) #27	Ly6e (ENSJJAG00000015921) #28	Ly6m (ENSJJAG00000017358) #29
Kangaroo rat	MODERN SPECIES	497	ENSDORG00000010839	ENSDORG00000029086	ENSDORG00000029564	Nrbp2 (ENSDORG00000004589) #8	Puf60 (ENSDORG00000004585) #9	Scrib (ENSDORG00000004583)	Iqank1 (ENSDORG00000027220) #11	ENSDORG00000025620 #12	Zfp623 (ENSDORG00000026298)	Gfus (ENSDORG00000000596) #16	Pycrl (ENSDORG00000000595) #17	Eef1d (ENSDORG00000000593) #19	Naprt (ENSDORG00000000591)	Gsdmd (ENSDORG00000000580) #21	Tigd5 (ENSDORG00000025658) #18	Zc3h3 (ENSDORG00000023832) #22	Rhpn1 (ENSDORG00000000889) #23	Top1mt (ENSDORG00000012850) #24	Zfp41 (ENSDORG00000026127)	ENSDORG00000011422 #25	Ly6h (ENSDORG00000023303) #26
Rodentia_A	ANCESTRAL SPECIES	18	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506 #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332
Sciuridae	ANCESTRAL SPECIES	17	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00940000159966.A	ENSGT00940000161506 #30	ENSGT00520000061332	ENSGT00730000111514	ENSGT00730000111571	ENSGT00940000162197
Marmotini	ANCESTRAL SPECIES	10	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00940000159966.A	ENSGT00940000161506 #30	ENSGT00520000061332	ENSGT00730000111514	ENSGT00730000111571	ENSGT00940000162197
Marmotini_b	ANCESTRAL SPECIES	6	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000153378.b.b #28	ENSGT00940000159966.A	ENSGT00940000161506 #30	ENSGT00520000061332	ENSGT00730000111514	ENSGT00730000111571	ENSGT00940000162197	ENSGT00940000162933
Arctic ground squirrel	MODERN SPECIES	436	NRBP2 (ENSUPAG00010023491) #8	PUF60 (ENSUPAG00010023489) #9	IQANK1 (ENSUPAG00010023470) #11	FAM83H (ENSUPAG00010023469) #12	MAPK15 (ENSUPAG00010023467) #13	ENSUPAG00010023466 #14	ENSUPAG00010023465 #15	ZNF623 (ENSUPAG00010023464)	GFUS (ENSUPAG00010023461) #16	PYCR3 (ENSUPAG00010023460) #17	TIGD5 (ENSUPAG00010023459) #18	EEF1D (ENSUPAG00010023458) #19	NAPRT (ENSUPAG00010023457)	MROH6 (ENSUPAG00010023456) #20	GSDMD (ENSUPAG00010023455) #21	ZC3H3 (ENSUPAG00010023454) #22	MAFA (ENSUPAG00010023453)	RHPN1 (ENSUPAG00010023452) #23	ZNF696 (ENSUPAG00010023451)	GLI4 (ENSUPAG00010023449)	ZFP41 (ENSUPAG00010023448)	ENSUPAG00010023446 #25	LY6H (ENSUPAG00010023445) #26	LY6E (ENSUPAG00010023443) #28
Squirrel	MODERN SPECIES	70	ENSSTOG00000031359	OPLAH (ENSSTOG00000002587)	ENSSTOG00000026841	ENSSTOG00000025838	PLEC (ENSSTOG00000023061)	NRBP2 (ENSSTOG00000023485) #8	PUF60 (ENSSTOG00000025037) #9	SCRIB (ENSSTOG00000003571)	FAM83H (ENSSTOG00000020789) #12	MAPK15 (ENSSTOG00000024211) #13	GFUS (ENSSTOG00000003700) #16	PYCR3 (ENSSTOG00000003681) #17	EEF1D (ENSSTOG00000000025) #19	NAPRT (ENSSTOG00000000024)	GSDMD (ENSSTOG00000025332) #21	ZC3H3 (ENSSTOG00000004358) #22	MAFA (ENSSTOG00000026889)	RHPN1 (ENSSTOG00000020790) #23	ZNF696 (ENSSTOG00000033270)	GLI4 (ENSSTOG00000023930)	ZFP41 (ENSSTOG00000022550)	LY6H (ENSSTOG00000001914) #26	ENSSTOG00000001472 #30	LY6D (ENSSTOG00000016531)	ENSSTOG00000022520	THEM6 (ENSSTOG00000022145)	PSCA (ENSSTOG00000008313) ##25	JRK (ENSSTOG00000021183)	ARC (ENSSTOG00000005258)	ADGRB1 (ENSSTOG00000027177)	ENSSTOG00000024244
Alpin marmot	MODERN SPECIES	18	PARP10 (ENSMMMG00000007089)	PLEC (ENSMMMG00000006621)	ENSMMMG00000006594	NRBP2 (ENSMMMG00000006581) #8	PUF60 (ENSMMMG00000006516) #9	ENSMMMG00000006425	ENSMMMG00000006411 #14	ENSMMMG00000006401 #15	ZNF623 (ENSMMMG00000006391)	GFUS (ENSMMMG00000006361) #16	PYCR3 (ENSMMMG00000006350) #17	EEF1D (ENSMMMG00000006276) #19	NAPRT (ENSMMMG00000006266)	MROH6 (ENSMMMG00000006251) #20	GSDMD (ENSMMMG00000006237) #21	ZC3H3 (ENSMMMG00000006034) #22	RHPN1 (ENSMMMG00000006003) #23	ZNF696 (ENSMMMG00000005990)	GLI4 (ENSMMMG00000006001)	ZFP41 (ENSMMMG00000005975)	ENSMMMG00000005968 #25	LY6H (ENSMMMG00000005953) #26	LY6L (ENSMMMG00000005942) #27	ENSMMMG00000005911	LY6E (ENSMMMG00000005897) #28	ENSMMMG00000005886	ENSMMMG00000005875	ENSMMMG00000005862 #30	ENSMMMG00000005852	LY6D (ENSMMMG00000005846)	ENSMMMG00000005842
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005000218	NRBP2 (ENSSVLG00005000166) #8	PUF60 (ENSSVLG00005024610) #9	ENSSVLG00005024516	FAM83H (ENSSVLG00005024372) #12	MAPK15 (ENSSVLG00005024296) #13	ENSSVLG00005024256 #14	ENSSVLG00005024227 #15	ZNF623 (ENSSVLG00005024218)	PYCR3 (ENSSVLG00005024114) #17	TIGD5 (ENSSVLG00005024082) #18	EEF1D (ENSSVLG00005023988) #19	NAPRT (ENSSVLG00005023946)	MROH6 (ENSSVLG00005023860) #20	GSDMD (ENSSVLG00005023840) #21	ZC3H3 (ENSSVLG00005023813) #22	MAFA (ENSSVLG00005023798)	GLI4 (ENSSVLG00005023630)	ENSSVLG00005023618	LY6H (ENSSVLG00005023525) #26	LY6E (ENSSVLG00005023441) #28	ENSSVLG00005023389	ENSSVLG00005023320	ENSSVLG00005023219	LY6D (ENSSVLG00005023172)	LYNX1 (ENSSVLG00005023135)	LYPD2 (ENSSVLG00005023079)	SLURP1 (ENSSVLG00005023055)	THEM6 (ENSSVLG00005023036)	PSCA (ENSSVLG00005023011) ##25	JRK (ENSSVLG00005022992)
Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT01100000266998	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b #28	ENSGT00730000111801 #29	ENSGT00940000161506.m.a #30	ENSGT00940000159966.A	ENSGT00940000159966.B	ENSGT00520000061332
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b.q.b #28	ENSGT00940000159966.A	ENSGT00940000161506.m.a #30	ENSGT00730000111801 #29	ENSGT00940000153378.b.b.q.a #28	ENSGT00520000061332
Hystricomorpha_b	ANCESTRAL SPECIES	27	ENSGT00940000155594 #9	ENSGT00940000154025.a	ENSGT00390000010763 #11	ENSGT00940000159342 #12	ENSGT00940000159758 #13	ENSGT00940000154427.B #14	ENSGT00940000164153 #15	ENSGT00940000163183	ENSGT00390000004681 #16	ENSGT00950000183044.a.b #17	ENSGT00940000154420.C.i #18	ENSGT00950000183014.f.b.a.a.t #19	ENSGT00940000153456.a	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747	ENSGT00940000153837.a.a #23	ENSGT00940000162943 #24	ENSGT00940000163493	ENSGT00940000163360	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b	ENSGT00940000153378.a.a #25	ENSGT00940000154560.b #26	ENSGT00940000154560.a #27	ENSGT00940000153378.b.b.q.b #28	ENSGT00940000159966.A	ENSGT00940000161506.m.a #30	ENSGT00730000111801 #29	ENSGT00940000153378.b.b.q.a #28	ENSGT00520000061332
Long-tailed chinchilla	MODERN SPECIES	161	PUF60 (ENSCLAG00000009154) #9	SCRIB (ENSCLAG00000010805)	IQANK1 (ENSCLAG00000013041) #11	FAM83H (ENSCLAG00000013519) #12	MAPK15 (ENSCLAG00000011011) #13	CCDC166 (ENSCLAG00000008849) #14	ENSCLAG00000011044 #15	ZNF623 (ENSCLAG00000014678)	GFUS (ENSCLAG00000008907) #16	PYCR3 (ENSCLAG00000010276) #17	TIGD5 (ENSCLAG00000018021) #18	ENSCLAG00000008571 #19	NAPRT (ENSCLAG00000014862)	MROH6 (ENSCLAG00000014422) #20	GSDMD (ENSCLAG00000009094) #21	ZC3H3 (ENSCLAG00000009999) #22	MAFA (ENSCLAG00000018099)	RHPN1 (ENSCLAG00000012218) #23	TOP1MT (ENSCLAG00000013877) #24	ZNF696 (ENSCLAG00000012633)	GLI4 (ENSCLAG00000012388)	ZFP41 (ENSCLAG00000009799)	GPIHBP1 (ENSCLAG00000008784) #25	LY6H (ENSCLAG00000008479) #26	LY6L (ENSCLAG00000010712) #27	ENSCLAG00000013664 #28	GML (ENSCLAG00000010524)	ENSCLAG00000013354 #30	ENSCLAG00000012302 #29	ENSCLAG00000014000 #28	ENSCLAG00000015365
Degu	MODERN SPECIES	145	ENSODEG00000014024 #9	SCRIB (ENSODEG00000013795)	IQANK1 (ENSODEG00000013696) #11	FAM83H (ENSODEG00000014158) #12	MAPK15 (ENSODEG00000014999) #13	CCDC166 (ENSODEG00000014189) #14	ENSODEG00000014226 #15	ENSODEG00000013485	GFUS (ENSODEG00000014465) #16	PYCR3 (ENSODEG00000015350) #17	TIGD5 (ENSODEG00000013505) #18	ENSODEG00000013624 #19	NAPRT (ENSODEG00000014091)	MROH6 (ENSODEG00000013415) #20	GSDMD (ENSODEG00000014859) #21	ZC3H3 (ENSODEG00000014239) #22	MAFA (ENSODEG00000020376)	RHPN1 (ENSODEG00000013521) #23	TOP1MT (ENSODEG00000013839) #24	ENSODEG00000014235	ZFP41 (ENSODEG00000020283)	GPIHBP1 (ENSODEG00000014571) #25	LY6H (ENSODEG00000013867) #26	ENSODEG00000020306	LY6E (ENSODEG00000014194) #28	ENSODEG00000014405	ENSODEG00000013937 #29	ENSODEG00000014076 #30	ENSODEG00000014283	LY6D (ENSODEG00000013766)	ENSODEG00000014168 #25
Guinea pig	MODERN SPECIES	95	PUF60 (ENSCPOG00000014613) #9	SCRIB (ENSCPOG00000014605)	IQANK1 (ENSCPOG00000020895) #11	FAM83H (ENSCPOG00000013323) #12	MAPK15 (ENSCPOG00000013318) #13	CCDC166 (ENSCPOG00000024168) #14	ENSCPOG00000032341 #15	ZNF623 (ENSCPOG00000009794)	GFUS (ENSCPOG00000000051) #16	PYCR3 (ENSCPOG00000039640) #17	TIGD5 (ENSCPOG00000039267) #18	EEF1D (ENSCPOG00000000048) #19	NAPRT (ENSCPOG00000000047)	MROH6 (ENSCPOG00000000046) #20	GSDMD (ENSCPOG00000000044) #21	ZC3H3 (ENSCPOG00000006248) #22	MAFA (ENSCPOG00000021977)	RHPN1 (ENSCPOG00000006972) #23	TOP1MT (ENSCPOG00000022690) #24	GLI4 (ENSCPOG00000040511)	ZFP41 (ENSCPOG00000040680)	GPIHBP1 (ENSCPOG00000040336) #25	LY6H (ENSCPOG00000037598) #26	ENSCPOG00000033154	ENSCPOG00000013558 #30	ENSCPOG00000024809 #30	LY6E (ENSCPOG00000034097) #28	ENSCPOG00000034677	ENSCPOG00000014091	ENSCPOG00000039291	ENSCPOG00000024688
Naked mole-rat female	MODERN SPECIES	1	PUF60 (ENSHGLG00000006111) #9	FAM83H (ENSHGLG00000016899) #12	MAPK15 (ENSHGLG00000044970) #13	ENSHGLG00000015050 #14	ENSHGLG00000039178 #14	ENSHGLG00000039255 #15	ZNF623 (ENSHGLG00000044862)	GFUS (ENSHGLG00000009464) #16	ENSHGLG00000006778 #17	TIGD5 (ENSHGLG00000007775) #18	ENSHGLG00000038349	ENSHGLG00000043389 #19	NAPRT (ENSHGLG00000013733)	MROH6 (ENSHGLG00000018619) #20	GSDMD (ENSHGLG00000008317) #21	ZC3H3 (ENSHGLG00000011234) #22	MAFA (ENSHGLG00000020639)	RHPN1 (ENSHGLG00000007767) #23	GLI4 (ENSHGLG00000036792)	ZFP41 (ENSHGLG00000005516)	GPIHBP1 (ENSHGLG00000043232) #25	ENSHGLG00000032185 #26	ENSHGLG00000045037 #27	ENSHGLG00000004712	ENSHGLG00000006100	ENSHGLG00000042259 #28	ENSHGLG00000036086 #29	ENSHGLG00000016698 #30	ENSHGLG00000007913 #30	ENSHGLG00000042859	ENSHGLG00000050763
Tree shrew	MODERN SPECIES	90													ENSTBEG00000001903	ENSTBEG00000001542 #20	ENSTBEG00000009287 #21	ENSTBEG00000009096 #22