Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000168737 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000168737 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Ovalentaria_B ANCESTRAL SPECIES 24 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Cichlidae ANCESTRAL SPECIES 37 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00390000005794 #33 ENSGT00550000074910 #34 Midas cichlid MODERN SPECIES 364 ap5s1 (ENSACIG00000005088) #19 CDC25B (ENSACIG00000005052) #20 noto (ENSACIG00000005040) #21 emx1 (ENSACIG00000005028) #22 sfxn5a (ENSACIG00000005012) #23 ENSACIG00000004987 #24 ENSACIG00000004976 #25 ENSACIG00000004960 #26 pank2 (ENSACIG00000004938) #27 loxl3b (ENSACIG00000004912) #28 mrps26 (ENSACIG00000004862) #29 si:dkey-33c12.3 (ENSACIG00000004840) #30 ENSACIG00000004805 #31 ENSACIG00000004801 #32 rab3gap2 (ENSACIG00000004724) #33 iars2 (ENSACIG00000004676) #34 Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00390000005794 #33 ENSGT00550000074910 #34 ENSGT00940000165614.x.a.b.b ENSGT00940000172724.d Nile tilapia MODERN SPECIES 10 foxi2 (ENSONIG00000012345) ENSONIG00000029006 ENSONIG00000012342 dnaaf9 (ENSONIG00000012327) ENSONIG00000012325 slc4a11 (ENSONIG00000012322) rpia (ENSONIG00000012320) EIF2AK3 (ENSONIG00000012314) ATRN (ENSONIG00000012302) gfra4a (ENSONIG00000041946) ENSONIG00000040004 ENSONIG00000028241 ap5s1 (ENSONIG00000012300) #19 CDC25B (ENSONIG00000012295) #20 noto (ENSONIG00000012292) #21 emx1 (ENSONIG00000031341) #22 ENSONIG00000012281 #24 ENSONIG00000031955 ENSONIG00000012279 #25 ENSONIG00000012278 #26 pank2 (ENSONIG00000012276) #27 loxl3b (ENSONIG00000012267) #28 mrps26 (ENSONIG00000012266) #29 si:dkey-33c12.3 (ENSONIG00000012264) #30 ENSONIG00000021034 #31 si:dkey-33c12.4 (ENSONIG00000028483) rab3gap2 (ENSONIG00000012257) #33 iars2 (ENSONIG00000012252) #34 ENSONIG00000035878 ENSONIG00000031305 ENSONIG00000012250 Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00390000005794 #33 ENSGT00550000074910 #34 ENSGT00940000172724.d.a.b ENSGT00390000017767.b.b.b Haplochromini ANCESTRAL SPECIES 42 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00390000005794 #33 ENSGT00550000074910 #34 ENSGT00940000165614.w ENSGT00940000172724.c Burton s mouthbrooder MODERN SPECIES 378 fgfr3 (ENSHBUG00000010008) ENSHBUG00000010022 foxi2 (ENSHBUG00000010027) ENSHBUG00000000869 ENSHBUG00000010053 ENSHBUG00000010073 ENSHBUG00000010095 ENSHBUG00000010107 slc4a11 (ENSHBUG00000010198) rpia (ENSHBUG00000000267) EIF2AK3 (ENSHBUG00000010330) ATRN (ENSHBUG00000010380) gfra4a (ENSHBUG00000010396) CDC25B (ENSHBUG00000010407) #20 noto (ENSHBUG00000010421) #21 emx1 (ENSHBUG00000010432) #22 sfxn5a (ENSHBUG00000010441) #23 RAB11FIP5 (ENSHBUG00000010460) #24 ENSHBUG00000010476 #25 ENSHBUG00000010545 #26 pank2 (ENSHBUG00000010594) #27 loxl3b (ENSHBUG00000010639) #28 mrps26 (ENSHBUG00000010675) #29 si:dkey-33c12.3 (ENSHBUG00000010692) #30 ENSHBUG00000010726 #31 si:dkey-33c12.4 (ENSHBUG00000010735) rab3gap2 (ENSHBUG00000000290) #33 iars2 (ENSHBUG00000010898) #34 ENSHBUG00000010954 ENSHBUG00000010969 ENSHBUG00000011146 Haplochromini_A ANCESTRAL SPECIES 44 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT01100000263664.a.a.b ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00390000005794 #33 ENSGT00550000074910 #34 ENSGT00940000165614.w ENSGT00940000172724.c Haplochromini_B ANCESTRAL SPECIES 55 ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT01100000263664.a.a.b ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00940000179604 ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00390000005794 #33 ENSGT00550000074910 #34 ENSGT00940000165614.w ENSGT00940000165614.x.b Zebra mbuna MODERN SPECIES 60 ap5s1 (ENSMZEG00005014824) #19 CDC25B (ENSMZEG00005014814) #20 noto (ENSMZEG00005014799) #21 emx1 (ENSMZEG00005014790) #22 sfxn5a (ENSMZEG00005014771) #23 ENSMZEG00005014757 #24 ENSMZEG00005014748 #25 ENSMZEG00005014743 #26 pank2 (ENSMZEG00005014719) #27 loxl3b (ENSMZEG00005014658) #28 mrps26 (ENSMZEG00005014646) #29 si:dkey-33c12.3 (ENSMZEG00005014642) #30 ENSMZEG00005014293 #31 si:dkey-33c12.4 (ENSMZEG00005014276) rab3gap2 (ENSMZEG00005014221) #33 iars2 (ENSMZEG00005014151) #34 ENSMZEG00005013550 ENSMZEG00005010776 ENSMZEG00005010749 Eastern happy MODERN SPECIES 10 ENSACLG00000012325 ENSACLG00000012317 dnaaf9 (ENSACLG00000012348) ENSACLG00000012416 slc4a11 (ENSACLG00000012446) ENSACLG00000012564 rpia (ENSACLG00000012576) EIF2AK3 (ENSACLG00000012653) ATRN (ENSACLG00000012747) gfra4a (ENSACLG00000013024) ENSACLG00000013029 ENSACLG00000013530 ap5s1 (ENSACLG00000013536) #19 ENSACLG00000013544 #20 noto (ENSACLG00000013615) #21 emx1 (ENSACLG00000013635) #22 sfxn5a (ENSACLG00000013646) #23 RAB11FIP5 (ENSACLG00000013769) #24 ENSACLG00000013789 ENSACLG00000013793 #25 ENSACLG00000013813 #26 pank2 (ENSACLG00000013827) #27 loxl3b (ENSACLG00000013885) #28 ENSACLG00000014096 mrps26 (ENSACLG00000014099) #29 si:dkey-33c12.3 (ENSACLG00000014116) #30 ENSACLG00000014135 #31 ENSACLG00000014166 si:dkey-33c12.4 (ENSACLG00000014192) rab3gap2 (ENSACLG00000014275) #33 iars2 (ENSACLG00000014763) #34 P. nyererei MODERN SPECIES 324 fgfr3 (ENSPNYG00000017549) ENSPNYG00000017588 foxi2 (ENSPNYG00000017605) ENSPNYG00000017640 ENSPNYG00000017649 ENSPNYG00000017663 ENSPNYG00000017676 slc4a11 (ENSPNYG00000017688) rpia (ENSPNYG00000017715) EIF2AK3 (ENSPNYG00000017747) ATRN (ENSPNYG00000017794) gfra4a (ENSPNYG00000017873) ap5s1 (ENSPNYG00000017952) #19 cdc25b (ENSPNYG00000017961) noto (ENSPNYG00000018017) #21 emx1 (ENSPNYG00000018039) #22 sfxn5a (ENSPNYG00000018107) #23 ENSPNYG00000018126 ENSPNYG00000018134 #24 ENSPNYG00000018142 #25 ENSPNYG00000018156 #26 loxl3b (ENSPNYG00000018176) #28 mrps26 (ENSPNYG00000018207) #29 si:dkey-33c12.3 (ENSPNYG00000018211) #30 ENSPNYG00000018230 #31 si:dkey-33c12.4 (ENSPNYG00000018262) rab3gap2 (ENSPNYG00000018342) #33 iars2 (ENSPNYG00000018793) #34 ENSPNYG00000018873 ENSPNYG00000018890 ENSPNYG00000018912 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 299 ENSNBRG00000023914 foxi2 (ENSNBRG00000023917) ENSNBRG00000023925 ENSNBRG00000023929 ENSNBRG00000023933 ENSNBRG00000023934 slc4a11 (ENSNBRG00000023937) rpia (ENSNBRG00000023943) EIF2AK3 (ENSNBRG00000023980) ATRN (ENSNBRG00000024070) gfra4a (ENSNBRG00000024085) ENSNBRG00000024090 ap5s1 (ENSNBRG00000024096) #19 ENSNBRG00000024099 #20 noto (ENSNBRG00000024104) #21 emx1 (ENSNBRG00000024109) #22 sfxn5a (ENSNBRG00000024115) #23 ENSNBRG00000024120 #24 ENSNBRG00000024121 #25 ENSNBRG00000024125 #26 pank2 (ENSNBRG00000024129) #27 loxl3b (ENSNBRG00000024138) #28 mrps26 (ENSNBRG00000024142) #29 si:dkey-33c12.3 (ENSNBRG00000024146) #30 ENSNBRG00000024149 #31 rab3gap2 (ENSNBRG00000024178) #33 iars2 (ENSNBRG00000024204) #34 ENSNBRG00000024206 ENSNBRG00000024209 ENSNBRG00000024211 ENSNBRG00000024213 Lyretail cichlid MODERN SPECIES 341 SLC44A1 (ENSNBRG00000013177) TBC1D2 (ENSNBRG00000013288) neurog1 (ENSNBRG00000013315) ENSNBRG00000013323 ENSNBRG00000013335 ENSNBRG00000013399 ENSNBRG00000013414 ENSNBRG00000013447 NFKB1 (ENSNBRG00000013462) DGKQ (ENSNBRG00000013510) mgat4b (ENSNBRG00000013586) canx (ENSNBRG00000013618) MAML1 (ENSNBRG00000013633) LTC4S (ENSNBRG00000013645) ENSNBRG00000013670 ENSNBRG00000013698 #22 b4galt7 (ENSNBRG00000013752) tmed9 (ENSNBRG00000013768) tmem216 (ENSNBRG00000013774) ENSNBRG00000013792 PCDH1 (ENSNBRG00000013804) ENSNBRG00000013827 ENSNBRG00000013836 PCDH12 (ENSNBRG00000013849) gm2a (ENSNBRG00000013855) ENSNBRG00000013871 ENSNBRG00000013910 thoc3 (ENSNBRG00000013917) cplx2 (ENSNBRG00000013942) ENSNBRG00000013963 ENSNBRG00000013981 Pomacentridae ANCESTRAL SPECIES 22 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000165600 ENSGT00940000165596 ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Pomacentridae_A ANCESTRAL SPECIES 31 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00940000165336.a.a.a.h ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Amphiprion ANCESTRAL SPECIES 27 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00940000165336.a.a.a.h.b ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000178332 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Clown anemonefish MODERN SPECIES 832 ap5s1 (ENSAOCG00000006403) #19 CDC25B (ENSAOCG00000006391) #20 noto (ENSAOCG00000006316) #21 emx1 (ENSAOCG00000006304) #22 sfxn5a (ENSAOCG00000006293) #23 ENSAOCG00000006284 Orange clownfish MODERN SPECIES 9 ENSAPEG00000004613 foxi2 (ENSAPEG00000004629) ENSAPEG00000004659 ENSAPEG00000004685 dnaaf9 (ENSAPEG00000004711) ENSAPEG00000004812 slc4a11 (ENSAPEG00000004828) rpia (ENSAPEG00000004888) EIF2AK3 (ENSAPEG00000004914) ATRN (ENSAPEG00000005019) gfra4a (ENSAPEG00000005102) selenou1b (ENSAPEG00000005140) ap5s1 (ENSAPEG00000005155) #19 CDC25B (ENSAPEG00000005167) #20 noto (ENSAPEG00000005298) #21 emx1 (ENSAPEG00000005317) #22 sfxn5a (ENSAPEG00000005348) #23 RAB11FIP5 (ENSAPEG00000005419) #24 ENSAPEG00000005438 #25 ENSAPEG00000005450 #26 pank2 (ENSAPEG00000005463) #27 loxl3b (ENSAPEG00000005513) #28 mrps26 (ENSAPEG00000005553) #29 si:dkey-33c12.3 (ENSAPEG00000005562) #30 ENSAPEG00000005585 #31 DCTN1 (ENSAPEG00000005690) SLC39A8 (ENSAPEG00000005921) manba (ENSAPEG00000005971) ube2d3 (ENSAPEG00000005990) ENSAPEG00000006007 CPXM1 (ENSAPEG00000006056) Spiny chromis MODERN SPECIES 40 selenou1b (ENSAPOG00000005517) ap5s1 (ENSAPOG00000005499) #19 CDC25B (ENSAPOG00000005494) #20 noto (ENSAPOG00000005478) #21 emx1 (ENSAPOG00000005459) #22 sfxn5a (ENSAPOG00000005445) #23 RAB11FIP5 (ENSAPOG00000005351) #24 ENSAPOG00000005328 #25 ENSAPOG00000005315 #26 pank2 (ENSAPOG00000005285) #27 loxl3b (ENSAPOG00000005233) #28 mrps26 (ENSAPOG00000005118) #29 si:dkey-33c12.3 (ENSAPOG00000005112) #30 ENSAPOG00000005093 #31 si:dkey-33c12.4 (ENSAPOG00000005058) DCTN1 (ENSAPOG00000005014) ENSAPOG00000004915 ENSAPOG00000004898 SLC39A8 (ENSAPOG00000004883) manba (ENSAPOG00000004855) Bicolor damselfish MODERN SPECIES 375 gfra4a (ENSSPAG00000014849) ENSSPAG00000014839 ap5s1 (ENSSPAG00000014829) #19 CDC25B (ENSSPAG00000014809) #20 noto (ENSSPAG00000014783) #21 emx1 (ENSSPAG00000014773) #22 sfxn5a (ENSSPAG00000014736) #23 ENSSPAG00000014725 ENSSPAG00000014719 #24 ENSSPAG00000014706 #25 ENSSPAG00000014692 #26 pank2 (ENSSPAG00000014665) #27 loxl3b (ENSSPAG00000014602) #28 mrps26 (ENSSPAG00000014577) #29 si:dkey-33c12.3 (ENSSPAG00000014572) #30 NANOS1 (ENSSPAG00000014569) #31 Atherinomorphae ANCESTRAL SPECIES 11 ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165600 ENSGT00940000168737 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Cyprinodontiformes ANCESTRAL SPECIES 21 ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165600 ENSGT00940000168737 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Aplocheiloidei ANCESTRAL SPECIES 29 ENSGT00940000166659 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Turquoise killifish MODERN SPECIES 1625 PEX12 (ENSNFUG00015023008) ENSNFUG00015023010 hoxb1a (ENSNFUG00015023012) hoxb2a (ENSNFUG00015023015) HOXB3A (ENSNFUG00015023020) HOXB4A (ENSNFUG00015023022) hoxb8a (ENSNFUG00015023025) hoxb9a (ENSNFUG00015023026) ENSNFUG00015023028 kcnc3a (ENSNFUG00015005093) AOC2 (ENSNFUG00015005121) ENSNFUG00015005204 ENSNFUG00015005595 GPS1 (ENSNFUG00015005639) NOTO (ENSNFUG00015005834) #21 emx1 (ENSNFUG00015005836) #22 RAB11FIP5A (ENSNFUG00015005839) #24 dkc1 (ENSNFUG00015005847) cinp (ENSNFUG00015005869) ZNF839 (ENSNFUG00015005891) TECPR2 (ENSNFUG00015005908) TRAF3 (ENSNFUG00015005951) MIPOL1 (ENSNFUG00015006068) C5orf63 (ENSNFUG00015006073) FOXA1 (ENSNFUG00015006080) ENSNFUG00015006084 SEC23A (ENSNFUG00015006109) ENSNFUG00015006170 srp54 (ENSNFUG00015006179) ENSNFUG00015006187 LRRC57 (ENSNFUG00015006190) Mangrove rivulus MODERN SPECIES 195 cdc25b (ENSKMAG00000016511) noto (ENSKMAG00000016549) #21 emx1 (ENSKMAG00000016558) #22 sfxn5a (ENSKMAG00000016582) #23 ENSKMAG00000016621 #24 ENSKMAG00000016640 #25 ENSKMAG00000016732 #26 pank2 (ENSKMAG00000016753) #27 cntn2 (ENSKMAG00000016771) ENSKMAG00000016789 chia.3 (ENSKMAG00000016809) arfrp1 (ENSKMAG00000016837) PLEKHA6 (ENSKMAG00000016865) ENSKMAG00000016889 ENSKMAG00000016894 ENSKMAG00000016901 ENSKMAG00000016922 tmem129 (ENSKMAG00000016953) Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000168737 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Poeciliinae ANCESTRAL SPECIES 8 ENSGT00940000166929 ENSGT00940000161979.B.o.cb.d.a.a.b.a.a ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000168737 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Poecilia ANCESTRAL SPECIES 44 ENSGT00940000166929 ENSGT00940000161979.B.o.cb.d.a.a.b.a.a ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000168737 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 NAME_6 ANCESTRAL SPECIES 3 ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Sailfin molly MODERN SPECIES 830 noto (ENSPLAG00000022383) #21 emx1 (ENSPLAG00000022391) #22 sfxn5a (ENSPLAG00000022398) #23 RAB11FIP5 (ENSPLAG00000022408) #24 ENSPLAG00000022423 #25 ENSPLAG00000022426 #26 pank2 (ENSPLAG00000022432) #27 loxl3b (ENSPLAG00000022475) #28 mrps26 (ENSPLAG00000022482) #29 si:dkey-33c12.3 (ENSPLAG00000022501) #30 ENSPLAG00000022525 #31 si:dkey-33c12.4 (ENSPLAG00000022537) Amazon molly MODERN SPECIES 491 ap5s1 (ENSPFOG00000010079) #19 ENSPFOG00000009958 #20 noto (ENSPFOG00000009939) #21 emx1 (ENSPFOG00000009935) #22 sfxn5a (ENSPFOG00000009748) #23 RAB11FIP5 (ENSPFOG00000022278) #24 ENSPFOG00000020009 #25 ENSPFOG00000009715 #26 pank2 (ENSPFOG00000009622) #27 loxl3b (ENSPFOG00000009296) #28 mrps26 (ENSPFOG00000009251) #29 si:dkey-33c12.3 (ENSPFOG00000009210) #30 ENSPFOG00000020008 #31 si:dkey-33c12.4 (ENSPFOG00000009143) ENSPFOG00000022918 DCTN1 (ENSPFOG00000008720) ENSPFOG00000020007 ENSPFOG00000008696 SLC39A8 (ENSPFOG00000008619) Guppy MODERN SPECIES 453 foxi2 (ENSPREG00000006353) ENSPREG00000006360 ENSPREG00000006385 ENSPREG00000006376 dnaaf9 (ENSPREG00000006418) ENSPREG00000006519 ENSPREG00000006563 slc4a11 (ENSPREG00000006620) rpia (ENSPREG00000006713) EIF2AK3 (ENSPREG00000006747) ATRN (ENSPREG00000006804) gfra4a (ENSPREG00000006867) ap5s1 (ENSPREG00000006882) #19 CDC25B (ENSPREG00000006892) #20 noto (ENSPREG00000006929) #21 emx1 (ENSPREG00000006945) #22 sfxn5a (ENSPREG00000007011) #23 RAB11FIP5 (ENSPREG00000007054) #24 ENSPREG00000007069 #25 ENSPREG00000007080 #26 pank2 (ENSPREG00000007099) #27 loxl3b (ENSPREG00000007134) #28 mrps26 (ENSPREG00000007165) #29 si:dkey-33c12.3 (ENSPREG00000007200) #30 NANOS1 (ENSPREG00000007213) #31 DCTN1 (ENSPREG00000007253) ENSPREG00000007345 ENSPREG00000007357 SLC39A8 (ENSPREG00000007376) manba (ENSPREG00000007400) ube2d3 (ENSPREG00000007494) Platyfish MODERN SPECIES 10 foxi2 (ENSXMAG00000025063) ENSXMAG00000023134 ENSXMAG00000030023 ENSXMAG00000025775 dnaaf9 (ENSXMAG00000007136) ENSXMAG00000024583 slc4a11 (ENSXMAG00000025385) rpia (ENSXMAG00000002395) EIF2AK3 (ENSXMAG00000002407) ENSXMAG00000023573 ATRN (ENSXMAG00000002433) gfra4a (ENSXMAG00000002475) ap5s1 (ENSXMAG00000026139) #19 ENSXMAG00000005736 #20 noto (ENSXMAG00000005732) #21 emx1 (ENSXMAG00000020883) #22 sfxn5a (ENSXMAG00000005696) #23 ENSXMAG00000020907 ENSXMAG00000024920 #24 ENSXMAG00000017745 #25 ENSXMAG00000022928 ENSXMAG00000022874 ENSXMAG00000022553 ENSXMAG00000024346 ENSXMAG00000028862 ENSXMAG00000028532 DCTN1 (ENSXMAG00000018541) si:dkey-33c12.4 (ENSXMAG00000018535) NANOS1 (ENSXMAG00000019985) #31 si:dkey-33c12.3 (ENSXMAG00000018528) #30 mrps26 (ENSXMAG00000025028) #29 NAME_4 ANCESTRAL SPECIES 104 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00940000165600 ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 Mummichog MODERN SPECIES 2297 foxi2 (ENSFHEG00000007884) ENSFHEG00000007893 ENSFHEG00000007909 dnaaf9 (ENSFHEG00000007929) ENSFHEG00000007953 slc4a11 (ENSFHEG00000007997) rpia (ENSFHEG00000008006) EIF2AK3 (ENSFHEG00000008112) ATRN (ENSFHEG00000008192) gfra4a (ENSFHEG00000008223) ENSFHEG00000008237 ap5s1 (ENSFHEG00000008244) #19 CDC25B (ENSFHEG00000008261) #20 ENSFHEG00000008272 noto (ENSFHEG00000008300) #21 emx1 (ENSFHEG00000008308) #22 sfxn5a (ENSFHEG00000008436) #23 RAB11FIP5 (ENSFHEG00000008453) #24 Sheepshead minnow MODERN SPECIES 818 ap5s1 (ENSCVAG00000014239) #19 ENSCVAG00000014237 #20 noto (ENSCVAG00000014228) #21 emx1 (ENSCVAG00000014200) #22 sfxn5a (ENSCVAG00000014192) #23 ENSCVAG00000014137 ENSCVAG00000014131 #24 ENSCVAG00000014124 #24 Oryzias ANCESTRAL SPECIES 3 ENSGT00940000154239.b ENSGT00940000154524.b ENSGT00390000002768.a ENSGT00940000156417.g.a ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155745 ENSGT01070000253760.b.a.a.a.b.a.a.a.a.a.a.b ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00390000011067.C ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b.h ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Oryzias_a ANCESTRAL SPECIES 29 ENSGT00940000154524.b ENSGT00390000002768.a ENSGT00940000156417.g.a ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT01060000248694 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155745 ENSGT01070000253760.b.a.a.a.b.a.a.a.a.a.a.b ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00390000011067.C ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b.h.b ENSGT00950000182932.A.b.a.b.h.a ENSGT00940000158926 ENSGT00390000001670 Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR MODERN SPECIES 14 LRFN2 (ENSORLG00000018222) ENSORLG00000030456 supt7l (ENSORLG00000018212) SLC4A1AP (ENSORLG00000018210) ENSORLG00000023619 ENSORLG00000018208 ENSORLG00000024850 mrpl33 (ENSORLG00000028315) rbks (ENSORLG00000018207) babam2 (ENSORLG00000018206) fosl2 (ENSORLG00000023079) wdr35 (ENSORLG00000018203) ENSORLG00000027908 ENSORLG00000018198 #20 noto (ENSORLG00000018195) #21 emx1 (ENSORLG00000022620) #22 ENSORLG00000029383 #24 ENSORLG00000018190 #25 ENSORLG00000018188 #26 pank2 (ENSORLG00000018187) #27 loxl3b (ENSORLG00000018185) #28 mrps26 (ENSORLG00000022499) #29 si:dkey-33c12.3 (ENSORLG00000018181) #30 nanos1 (ENSORLG00000027849) #31 si:dkey-33c12.4 (ENSORLG00000029651) dynlrb2 (ENSORLG00000027746) ENSORLG00000024689 DCTN1 (ENSORLG00000018173) ENSORLG00000026473 ENSORLG00000018170 ENSORLG00000018169 Japanese Medaka HdrR MODERN SPECIES 1 ENSORLG00000022088 ENSORLG00000027596 ENSORLG00000020414 ENSORLG00000028427 ENSORLG00000025092 ENSORLG00000026271 ENSORLG00000021832 NFKB1 (ENSORLG00000030524) DGKQ (ENSORLG00000019496) mgat4b (ENSORLG00000018573) canx (ENSORLG00000018595) ENSORLG00000027469 MAML1 (ENSORLG00000024588) LTC4S (ENSORLG00000023609) ENSORLG00000025235 ENSORLG00000023242 #22 ENSORLG00000025070 b4galt7 (ENSORLG00000011570) tmed9 (ENSORLG00000011600) tmem216 (ENSORLG00000011578) ENSORLG00000028242 ENSORLG00000029453 ENSORLG00000028614 ENSORLG00000026178 ENSORLG00000011559 ENSORLG00000027731 PCDH12 (ENSORLG00000011535) gm2a (ENSORLG00000024392) ENSORLG00000011511 thoc3 (ENSORLG00000030384) cplx2 (ENSORLG00000011505) Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 3234 emx1 (ENSOSIG00000009770) #22 Chinese medaka MODERN SPECIES 59 ENSOSIG00000014620 ENSOSIG00000014618 #22 b4galt7 (ENSOSIG00000014617) tmed9 (ENSOSIG00000014602) tmem216 (ENSOSIG00000014598) ENSOSIG00000014588 ENSOSIG00000014587 PCDH1 (ENSOSIG00000014579) PCDH12 (ENSOSIG00000014577) gm2a (ENSOSIG00000014576) ENSOSIG00000014575 thoc3 (ENSOSIG00000014569) ENSOSIG00000014565 slc25a48 (ENSOSIG00000014563) glra1 (ENSOSIG00000014560) g3bp1 (ENSOSIG00000014554) sparc (ENSOSIG00000014526) Oryzias_b ANCESTRAL SPECIES 44 ENSGT00940000154239.b ENSGT00940000154524.b ENSGT00390000002768.a ENSGT00940000156417.g.a ENSGT00390000005572 ENSGT00940000155320 ENSGT00390000001612 ENSGT00390000010130 ENSGT00390000005743 ENSGT00390000004208.j ENSGT00940000158876 ENSGT00940000155745 ENSGT01070000253760.b.a.a.a.b.a.a.a.a.a.a.b ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f Indian medaka DUPLICATION Indian medaka MODERN SPECIES ube2d3 (ENSOMEG00000000201) manba (ENSOMEG00000008274) SLC39A8 (ENSOMEG00000008299) ENSOMEG00000008311 ENSOMEG00000008326 DCTN1 (ENSOMEG00000008657) dynlrb2 (ENSOMEG00000008817) ENSOMEG00000008848 si:dkey-33c12.3 (ENSOMEG00000008857) #30 ENSOMEG00000008866 #31 ENSOMEG00000008913 wdr35 (ENSOMEG00000009064) ENSOMEG00000009116 CDC25B (ENSOMEG00000009142) #20 noto (ENSOMEG00000009177) #21 emx1 (ENSOMEG00000000227) #22 ENSOMEG00000009212 #24 ENSOMEG00000009273 #25 ENSOMEG00000009327 #26 pank2 (ENSOMEG00000009357) #27 mrps26 (ENSOMEG00000009374) #29 loxl3b (ENSOMEG00000009459) #28 fosl2 (ENSOMEG00000009493) babam2 (ENSOMEG00000009538) rbks (ENSOMEG00000009584) mrpl33 (ENSOMEG00000009622) ENSOMEG00000009661 ENSOMEG00000009780 supt7l (ENSOMEG00000009818) LRFN2 (ENSOMEG00000009832) ENSOMEG00000009845 Indian medaka MODERN SPECIES 37 ENSOMEG00000022594 ENSOMEG00000022560 ENSOMEG00000022533 NFKB1 (ENSOMEG00000022508) DGKQ (ENSOMEG00000022467) mgat4b (ENSOMEG00000022443) canx (ENSOMEG00000022389) ENSOMEG00000022312 LTC4S (ENSOMEG00000022231) ENSOMEG00000022223 ENSOMEG00000022205 #22 ENSOMEG00000022187 b4galt7 (ENSOMEG00000022170) tmed9 (ENSOMEG00000022161) tmem216 (ENSOMEG00000022141) ENSOMEG00000022135 PCDH1 (ENSOMEG00000022101) ENSOMEG00000022057 PCDH12 (ENSOMEG00000022043) gm2a (ENSOMEG00000022026) ENSOMEG00000022005 thoc3 (ENSOMEG00000021977) cplx2 (ENSOMEG00000021947) ENSOMEG00000021911 slc25a48 (ENSOMEG00000021884) ENSOMEG00000021833 Javanese ricefish DUPLICATION Javanese ricefish MODERN SPECIES 14 ENSOJAG00000021328 supt7l (ENSOJAG00000021342) SLC4A1AP (ENSOJAG00000021346) ENSOJAG00000021380 mrpl33 (ENSOJAG00000021385) RBKS (ENSOJAG00000021388) babam2 (ENSOJAG00000021399) fosl2 (ENSOJAG00000021445) wdr35 (ENSOJAG00000021462) ENSOJAG00000021500 noto (ENSOJAG00000021544) #21 emx1 (ENSOJAG00000021548) #22 ENSOJAG00000021552 #24 ENSOJAG00000021564 #25 ENSOJAG00000021569 #26 pank2 (ENSOJAG00000021580) #27 loxl3b (ENSOJAG00000021607) #28 mrps26 (ENSOJAG00000021636) #29 ENSOJAG00000021643 ENSOJAG00000021656 ENSOJAG00000021667 si:dkey-33c12.3 (ENSOJAG00000021674) #30 si:dkey-33c12.4 (ENSOJAG00000021684) mrps26 (ENSOJAG00000021699) #29 ENSOJAG00000021710 ENSOJAG00000021716 ENSOJAG00000021720 Javanese ricefish MODERN SPECIES 1 cplx2 (ENSOJAG00000001813) ENSOJAG00000001798 ENSOJAG00000001769 gm2a (ENSOJAG00000001748) PCDH12 (ENSOJAG00000001726) PCDH1 (ENSOJAG00000001705) ENSOJAG00000001686 LTC4S (ENSOJAG00000001666) ENSOJAG00000001607 ENSOJAG00000001577 mgat4b (ENSOJAG00000022654) NFKB1 (ENSOJAG00000022598) ENSOJAG00000022588 ENSOJAG00000022489 ENSOJAG00000022465 ENSOJAG00000022445 #22 ENSOJAG00000022438 tmed9 (ENSOJAG00000022428) tmem216 (ENSOJAG00000022424) ENSOJAG00000022412 ENSOJAG00000022404 Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Eupercaria ANCESTRAL SPECIES 9 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Tetraodontidae ANCESTRAL SPECIES 3 ENSGT00950000183167.a.a ENSGT00940000159880 ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT00940000173692 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Fugu MODERN SPECIES 11 ENSTRUG00000026287 ENSTRUG00000023573 foxi2 (ENSTRUG00000003477) ENSTRUG00000028684 dnaaf9 (ENSTRUG00000027011) ENSTRUG00000022771 slc4a11 (ENSTRUG00000004080) rpia (ENSTRUG00000003878) ATRN (ENSTRUG00000001707) ENSTRUG00000027485 gfra4a (ENSTRUG00000031411) ENSTRUG00000032295 ap5s1 (ENSTRUG00000017581) #19 cdc25b (ENSTRUG00000017584) noto (ENSTRUG00000017598) #21 emx1 (ENSTRUG00000032463) #22 ENSTRUG00000017608 #24 si:dkey-33c12.3 (ENSTRUG00000017621) #30 ENSTRUG00000019839 #31 ENSTRUG00000022374 ENSTRUG00000032540 DCTN1 (ENSTRUG00000028508) ENSTRUG00000017663 SLC39A8 (ENSTRUG00000017668) manba (ENSTRUG00000026390) ube2d3 (ENSTRUG00000009326) ENSTRUG00000009155 CPXM1 (ENSTRUG00000008974) wdr32 (ENSTRUG00000008886) marc1 (ENSTRUG00000008727) ENSTRUG00000008667 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 1 nsd2 (ENSTNIG00000012402) letm1 (ENSTNIG00000012403) fgfr3 (ENSTNIG00000012404) foxi2 (ENSTNIG00000003048) ENSTNIG00000006744 ENSTNIG00000006756 dnaaf9 (ENSTNIG00000010559) slc4a11 (ENSTNIG00000010558) rpia (ENSTNIG00000010557) EIF2AK3 (ENSTNIG00000010556) ATRN (ENSTNIG00000010555) gfra4a (ENSTNIG00000010554) ap5s1 (ENSTNIG00000010553) #19 CDC25B (ENSTNIG00000010552) #20 noto (ENSTNIG00000010551) #21 emx1 (ENSTNIG00000010550) #22 sfxn5a (ENSTNIG00000010549) #23 ENSTNIG00000010548 #24 ENSTNIG00000010547 pank2 (ENSTNIG00000010546) #27 loxl3b (ENSTNIG00000010545) #28 mrps26 (ENSTNIG00000001213) #29 si:dkey-33c12.3 (ENSTNIG00000010544) #30 ENSTNIG00000010543 #31 ENSTNIG00000010542 DCTN1 (ENSTNIG00000010541) ENSTNIG00000000950 ENSTNIG00000010540 manba (ENSTNIG00000010539) ENSTNIG00000010538 CPXM1 (ENSTNIG00000010537) Tetraodon MODERN SPECIES 8 dhx34 (ENSTNIG00000016288) spred3 (ENSTNIG00000016287) psmd8 (ENSTNIG00000016286) EHD2 (ENSTNIG00000016284) BICRA (ENSTNIG00000016283) napab (ENSTNIG00000016282) B3GNT8 (ENSTNIG00000016281) bckdha (ENSTNIG00000016280) exosc5 (ENSTNIG00000000238) ppp1r13l (ENSTNIG00000016279) ENSTNIG00000016278 urb1 (ENSTNIG00000016277) ENSTNIG00000016276 arfip2a (ENSTNIG00000016275) ENSTNIG00000016274 ENSTNIG00000016273 #22 TRIM3 (ENSTNIG00000016272) frem2b (ENSTNIG00000016271) trpc4b (ENSTNIG00000016270) postnb (ENSTNIG00000016269) spartb (ENSTNIG00000016268) dclk1b (ENSTNIG00000016267) ENSTNIG00000016266 mab21l1 (ENSTNIG00000016265) ENSTNIG00000016264 ENSTNIG00000016263 trmt9b (ENSTNIG00000016262) ENSTNIG00000016261 FRY (ENSTNIG00000016260) ENSTNIG00000016259 hmgb1b (ENSTNIG00000016258) Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Ballan wrasse MODERN SPECIES 1051 CDC25B (ENSLBEG00000014438) #20 noto (ENSLBEG00000014392) #21 emx1 (ENSLBEG00000014304) #22 ENSLBEG00000014279 #23 Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Gilthead seabream MODERN SPECIES 7 ENSSAUG00010022571 ENSSAUG00010022572 foxi2 (ENSSAUG00010022573) ENSSAUG00010022575 ENSSAUG00010022577 dnaaf9 (ENSSAUG00010022586) ENSSAUG00010022847 slc4a11 (ENSSAUG00010022849) rpia (ENSSAUG00010022854) EIF2AK3 (ENSSAUG00010022861) ATRN (ENSSAUG00010023368) gfra4a (ENSSAUG00010014250) ap5s1 (ENSSAUG00010014251) #19 CDC25B (ENSSAUG00010014253) #20 noto (ENSSAUG00010014256) #21 emx1 (ENSSAUG00010014257) #22 sfxn5a (ENSSAUG00010014264) #23 ENSSAUG00010014266 #24 ENSSAUG00010014268 ENSSAUG00010014269 #25 ENSSAUG00010014270 #26 pank2 (ENSSAUG00010014272) #27 loxl3b (ENSSAUG00010014286) #28 mrps26 (ENSSAUG00010015554) #29 si:dkey-33c12.3 (ENSSAUG00010015555) #30 ENSSAUG00010015556 #31 si:dkey-33c12.4 (ENSSAUG00010015557) ENSSAUG00010015560 DCTN1 (ENSSAUG00010015594) ENSSAUG00010017217 SLC39A8 (ENSSAUG00010017219) Eupercaria_incertae_sedis ANCESTRAL SPECIES 25 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Large yellow croaker MODERN SPECIES 495 fgfr3 (ENSLCRG00005010056) ENSLCRG00005019903 foxi2 (ENSLCRG00005019904) ENSLCRG00005013374 ENSLCRG00005013375 dnaaf9 (ENSLCRG00005013378) ENSLCRG00005013383 slc4a11 (ENSLCRG00005013384) rpia (ENSLCRG00005013425) EIF2AK3 (ENSLCRG00005013431) ATRN (ENSLCRG00005014389) gfra4a (ENSLCRG00005014441) ap5s1 (ENSLCRG00005014442) #19 CDC25B (ENSLCRG00005014443) #20 noto (ENSLCRG00005014444) #21 emx1 (ENSLCRG00005014445) #22 ENSLCRG00005014446 sfxn5a (ENSLCRG00005014448) #23 RAB11FIP5 (ENSLCRG00005014746) #24 ENSLCRG00005014751 #25 ENSLCRG00005014754 pank2 (ENSLCRG00005014756) #27 loxl3b (ENSLCRG00005014768) #28 si:dkey-33c12.3 (ENSLCRG00005015876) #30 ENSLCRG00005015880 ENSLCRG00005015883 ENSLCRG00005015884 ENSLCRG00005015886 GPR68 (ENSLCRG00005015920) yipf6 (ENSLCRG00005015922) ENSLCRG00005015923 European seabass MODERN SPECIES 2 nsd2 (ENSDLAG00005024506) letm1 (ENSDLAG00005024363) fgfr3 (ENSDLAG00005023582) foxi2 (ENSDLAG00005032945) ENSDLAG00005030932 ENSDLAG00005023524 ENSDLAG00005031783 dnaaf9 (ENSDLAG00005023328) slc4a11 (ENSDLAG00005023152) ENSDLAG00005022530 ENSDLAG00005022413 gfra4a (ENSDLAG00005022401) ap5s1 (ENSDLAG00005022398) #19 ENSDLAG00005022395 #20 noto (ENSDLAG00005030909) #21 emx1 (ENSDLAG00005030328) #22 sfxn5a (ENSDLAG00005022377) #23 RAB11FIP5 (ENSDLAG00005022373) #24 ENSDLAG00005022372 #25 ENSDLAG00005029721 #26 pank2 (ENSDLAG00005022355) #27 loxl3b (ENSDLAG00005021826) #28 mrps26 (ENSDLAG00005028572) #29 ENSDLAG00005031384 #30 ENSDLAG00005030771 #31 si:dkey-33c12.4 (ENSDLAG00005021768) ENSDLAG00005021748 ENSDLAG00005019804 manba (ENSDLAG00005019670) ube2d3 (ENSDLAG00005019616) ENSDLAG00005019470 Perciformes ANCESTRAL SPECIES 12 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Perciformes_a ANCESTRAL SPECIES 10 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000165600 ENSGT00940000168737 ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Channel bull blenny MODERN SPECIES 14 ENSCGOG00000022230 ENSCGOG00000022229 ENSCGOG00000022231 ENSCGOG00000022235 ENSCGOG00000022239 ENSCGOG00000022240 slc4a11 (ENSCGOG00000022246) rpia (ENSCGOG00000022345) EIF2AK3 (ENSCGOG00000022353) ATRN (ENSCGOG00000022488) gfra4a (ENSCGOG00000022614) ENSCGOG00000022616 ap5s1 (ENSCGOG00000022617) #19 ENSCGOG00000022621 #20 noto (ENSCGOG00000022626) #21 emx1 (ENSCGOG00000022627) #22 sfxn5a (ENSCGOG00000022628) #23 ENSCGOG00000022629 #24 ENSCGOG00000022630 ENSCGOG00000022631 #25 ENSCGOG00000022632 #26 pank2 (ENSCGOG00000022634) #27 loxl3b (ENSCGOG00000022662) #28 mrps26 (ENSCGOG00000022970) #29 si:dkey-33c12.3 (ENSCGOG00000022972) #30 ENSCGOG00000022973 #31 ENSCGOG00000002599 DCTN1 (ENSCGOG00000002902) ENSCGOG00000005303 SLC39A8 (ENSCGOG00000005306) manba (ENSCGOG00000005310) Pike perch MODERN SPECIES 24 ATRN (ENSSLUG00000010955) gfra4a (ENSSLUG00000012212) ap5s1 (ENSSLUG00000012229) #19 ENSSLUG00000012235 #20 noto (ENSSLUG00000012242) #21 emx1 (ENSSLUG00000012244) #22 sfxn5a (ENSSLUG00000012255) #23 ENSSLUG00000012260 #24 ENSSLUG00000012264 #25 ENSSLUG00000012276 #26 ENSSLUG00000012338 #26 pank2 (ENSSLUG00000012391) #27 loxl3b (ENSSLUG00000012453) #28 mrps26 (ENSSLUG00000012750) #29 si:dkey-33c12.3 (ENSSLUG00000012756) #30 ENSSLUG00000012760 #31 si:dkey-33c12.4 (ENSSLUG00000012765) DCTN1 (ENSSLUG00000012994) ENSSLUG00000018149 SLC39A8 (ENSSLUG00000018153) manba (ENSSLUG00000018161) Cottioidei ANCESTRAL SPECIES 8 ENSGT00950000183167.a.a ENSGT00940000159880 ENSGT00940000162660.b.a.g.a ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 Stickleback MODERN SPECIES 15 ckba (ENSGACG00000004758) trmt61a (ENSGACG00000004779) bag5 (ENSGACG00000004786) coa8 (ENSGACG00000004787) klc1a (ENSGACG00000004792) zfyve21 (ENSGACG00000004809) ENSGACG00000004813 ENSGACG00000004815 ENSGACG00000004818 brf1a (ENSGACG00000004823) BTBD6 (ENSGACG00000004835) ENSGACG00000004847 ap5s1 (ENSGACG00000004849) #19 CDC25B (ENSGACG00000004851) #20 noto (ENSGACG00000004856) #21 emx1 (ENSGACG00000004860) #22 sfxn5a (ENSGACG00000004871) #23 ENSGACG00000004886 #24 ENSGACG00000004888 ENSGACG00000004891 #26 pank2 (ENSGACG00000004895) #27 loxl3b (ENSGACG00000004902) #28 mrps26 (ENSGACG00000004920) #29 si:dkey-33c12.3 (ENSGACG00000004925) #30 ENSGACG00000004930 #31 ENSGACG00000004933 ENSGACG00000004936 ENSGACG00000004943 ENSGACG00000004945 DCTN1 (ENSGACG00000004951) ENSGACG00000004975 Lumpfish MODERN SPECIES 14 fgfr3 (ENSCLMG00005007355) ENSCLMG00005013994 foxi2 (ENSCLMG00005013997) ENSCLMG00005014000 ENSCLMG00005014002 dnaaf9 (ENSCLMG00005014012) slc4a11 (ENSCLMG00005014040) rpia (ENSCLMG00005014367) EIF2AK3 (ENSCLMG00005014378) ATRN (ENSCLMG00005014797) ENSCLMG00005014877 gfra4a (ENSCLMG00005014879) ap5s1 (ENSCLMG00005014881) #19 ENSCLMG00005014885 #20 noto (ENSCLMG00005014887) #21 emx1 (ENSCLMG00005014890) #22 sfxn5a (ENSCLMG00005014891) #23 ENSCLMG00005014893 ##24 ENSCLMG00005014894 #24 ENSCLMG00005014895 #25 ENSCLMG00005014897 #26 pank2 (ENSCLMG00005014906) #27 loxl3b (ENSCLMG00005014919) #28 mrps26 (ENSCLMG00005015122) #29 si:dkey-33c12.3 (ENSCLMG00005015123) #30 NANOS1 (ENSCLMG00005015126) #31 si:dkey-33c12.4 (ENSCLMG00005015128) ENSCLMG00005015132 DCTN1 (ENSCLMG00005015150) ENSCLMG00005015311 SLC39A8 (ENSCLMG00005015312) Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a.b ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Anabantaria ANCESTRAL SPECIES 10 ENSGT00950000183167.a.a ENSGT00940000159880 ENSGT00940000162660.b.a.g.a.b ENSGT00940000166929 ENSGT00940000162161.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Anabantoidei ANCESTRAL SPECIES 9 ENSGT00950000183167.a.a ENSGT00940000159880 ENSGT00940000162660.b.a.g.a.b ENSGT00940000166929 ENSGT00940000162161.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Siamese fighting fish MODERN SPECIES 12 letm1 (ENSBSLG00000021202) ENSBSLG00000020752 fgfr3 (ENSBSLG00000012509) foxi2 (ENSBSLG00000011857) ENSBSLG00000011833 ENSBSLG00000011695 ENSBSLG00000011609 slc4a11 (ENSBSLG00000011321) rpia (ENSBSLG00000011279) EIF2AK3 (ENSBSLG00000010481) ATRN (ENSBSLG00000008056) gfra4a (ENSBSLG00000007809) ap5s1 (ENSBSLG00000026195) #19 ENSBSLG00000026193 #20 noto (ENSBSLG00000026192) #21 emx1 (ENSBSLG00000026191) #22 sfxn5a (ENSBSLG00000026190) #23 RAB11FIP5 (ENSBSLG00000026189) #24 ENSBSLG00000026187 ZNF106 (ENSBSLG00000026185) capn3a (ENSBSLG00000026167) GANC (ENSBSLG00000026153) TMEM87A (ENSBSLG00000026143) vps39 (ENSBSLG00000026131) GALNT16 (ENSBSLG00000026059) numb (ENSBSLG00000026025) exd2 (ENSBSLG00000026021) ENSBSLG00000026010 erh (ENSBSLG00000026002) psen1 (ENSBSLG00000025994) ENSBSLG00000025974 Climbing perch MODERN SPECIES 13 letm1 (ENSATEG00000018058) fgfr3 (ENSATEG00000018092) ENSATEG00000018171 foxi2 (ENSATEG00000018209) ENSATEG00000018218 dnaaf9 (ENSATEG00000018228) ENSATEG00000026508 slc4a11 (ENSATEG00000018312) rpia (ENSATEG00000018351) ENSATEG00000018381 ENSATEG00000018402 gfra4a (ENSATEG00000018486) ap5s1 (ENSATEG00000028095) #19 ENSATEG00000018533 #20 noto (ENSATEG00000018628) #21 emx1 (ENSATEG00000018637) #22 sfxn5a (ENSATEG00000018650) #23 RAB11FIP5 (ENSATEG00000018693) #24 ENSATEG00000018707 #25 ENSATEG00000018718 #26 pank2 (ENSATEG00000018731) #27 loxl3b (ENSATEG00000018763) #28 mrps26 (ENSATEG00000018841) #29 ENSATEG00000018850 #30 ENSATEG00000018856 #31 si:dkey-33c12.4 (ENSATEG00000018885) ENSATEG00000018908 ENSATEG00000018958 SLC39A8 (ENSATEG00000018981) manba (ENSATEG00000019029) ube2d3 (ENSATEG00000019090) Zig-zag eel MODERN SPECIES 14 letm1 (ENSMAMG00000000086) fgfr3 (ENSMAMG00000000087) ENSMAMG00000028428 foxi2 (ENSMAMG00000000089) ENSMAMG00000000090 dnaaf9 (ENSMAMG00000000091) ENSMAMG00000000092 slc4a11 (ENSMAMG00000000093) rpia (ENSMAMG00000000094) ENSMAMG00000000095 ENSMAMG00000000096 gfra4a (ENSMAMG00000000097) ap5s1 (ENSMAMG00000000098) #19 ENSMAMG00000000099 #20 noto (ENSMAMG00000000100) #21 emx1 (ENSMAMG00000000101) #22 ENSMAMG00000000102 #24 ENSMAMG00000027101 #25 ENSMAMG00000000104 #26 pank2 (ENSMAMG00000000105) #27 loxl3b (ENSMAMG00000000107) #28 mrps26 (ENSMAMG00000000108) #29 ENSMAMG00000000109 #30 ENSMAMG00000000110 #31 si:dkey-33c12.4 (ENSMAMG00000000111) ENSMAMG00000000113 ENSMAMG00000000114 SLC39A8 (ENSMAMG00000000115) manba (ENSMAMG00000000116) ube2d3 (ENSMAMG00000000117) ENSMAMG00000000118 Carangaria ANCESTRAL SPECIES 10 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a.b ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a.b ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352 ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Turbot MODERN SPECIES 8 letm1 (ENSSMAG00000006721) fgfr3 (ENSSMAG00000006801) ENSSMAG00000006841 foxi2 (ENSSMAG00000006868) ENSSMAG00000006870 ENSSMAG00000006880 dnaaf9 (ENSSMAG00000006894) slc4a11 (ENSSMAG00000006939) rpia (ENSSMAG00000007050) ENSSMAG00000007109 ENSSMAG00000007222 gfra4a (ENSSMAG00000007459) ap5s1 (ENSSMAG00000007672) #19 ENSSMAG00000007692 #20 noto (ENSSMAG00000007744) #21 emx1 (ENSSMAG00000007754) #22 sfxn5a (ENSSMAG00000007776) #23 RAB11FIP5 (ENSSMAG00000007830) #24 ENSSMAG00000007836 #25 ENSSMAG00000007841 #26 pank2 (ENSSMAG00000007851) #27 loxl3b (ENSSMAG00000007916) #28 mrps26 (ENSSMAG00000007897) #29 ENSSMAG00000008025 #30 ENSSMAG00000008048 #31 si:dkey-33c12.4 (ENSSMAG00000008147) ENSSMAG00000008205 ENSSMAG00000008402 SLC39A8 (ENSSMAG00000008412) manba (ENSSMAG00000008423) ube2d3 (ENSSMAG00000008479) Tongue sole MODERN SPECIES letm1 (ENSCSEG00000013635) fgfr3 (ENSCSEG00000015127) foxi2 (ENSCSEG00000015231) ENSCSEG00000015236 dnaaf9 (ENSCSEG00000015244) ENSCSEG00000015265 slc4a11 (ENSCSEG00000015287) rpia (ENSCSEG00000015347) EIF2AK3 (ENSCSEG00000015368) ATRN (ENSCSEG00000015399) gfra4a (ENSCSEG00000015617) ENSCSEG00000015630 ap5s1 (ENSCSEG00000015633) #19 ENSCSEG00000015640 #20 noto (ENSCSEG00000015654) #21 emx1 (ENSCSEG00000015661) #22 sfxn5a (ENSCSEG00000015667) #23 RAB11FIP5 (ENSCSEG00000015684) #24 dio2 (ENSCSEG00000015697) otud5a (ENSCSEG00000015705) ENSCSEG00000015708 ENSCSEG00000015726 adck1 (ENSCSEG00000015733) slirp (ENSCSEG00000015766) alkbh1 (ENSCSEG00000015769) ldah (ENSCSEG00000015772) APOB (ENSCSEG00000015782) DGLUCY (ENSCSEG00000015809) GPR68 (ENSCSEG00000015834) ENSCSEG00000015841 ENSCSEG00000015851 Carangaria_A ANCESTRAL SPECIES 4 ENSGT00940000159880 ENSGT00940000162660.b.a.g.a.b ENSGT00940000166929 ENSGT00940000162161.B ENSGT00940000164100.B ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352.x ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Seriola ANCESTRAL SPECIES 46 ENSGT00390000017528 ENSGT00940000162504 ENSGT01090000260082.d.b.a ENSGT00940000158248.a ENSGT00940000159665 ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894.b ENSGT00390000004352.x ENSGT00940000158121 ENSGT00940000157346 ENSGT00940000160491.d.a ENSGT00390000013178 #19 ENSGT00940000158524 #20 ENSGT00940000154361.B #21 ENSGT00940000161476 #22 ENSGT01030000234641.a.a.b #23 ENSGT00940000158783.a.a #24 ENSGT01030000234518.A.a.a #25 ENSGT01030000234772 #26 ENSGT00940000157626 #27 ENSGT00940000158157 #28 ENSGT00390000008453 #29 ENSGT00940000165724 #30 ENSGT00950000183135.B.a.a #31 ENSGT00940000161036.A.f ENSGT00940000155378.c.a ENSGT00950000182932.A.b.a.b ENSGT00940000158926 ENSGT00390000001670 ENSGT00940000153169.A.b.b.e.a Greater amberjack MODERN SPECIES 62 nenf (ENSSDUG00000001997) ezra (ENSSDUG00000002017) ENSSDUG00000002064 ENSSDUG00000002086 marc1 (ENSSDUG00000002171) dnaaf9 (ENSSDUG00000002267) ENSSDUG00000002518 slc4a11 (ENSSDUG00000002550) rpia (ENSSDUG00000002678) EIF2AK3 (ENSSDUG00000002716) ATRN (ENSSDUG00000002730) gfra4a (ENSSDUG00000002798) ap5s1 (ENSSDUG00000002841) #19 CDC25B (ENSSDUG00000002868) #20 noto (ENSSDUG00000002923) #21 emx1 (ENSSDUG00000002929) #22 sfxn5a (ENSSDUG00000002936) #23 RAB11FIP5 (ENSSDUG00000002997) #24 ENSSDUG00000003009 #25 ENSSDUG00000003021 #26 pank2 (ENSSDUG00000003056) #27 loxl3b (ENSSDUG00000003095) #28 mrps26 (ENSSDUG00000003187) #29 si:dkey-33c12.3 (ENSSDUG00000003191) #30 ENSSDUG00000003196 #31 si:dkey-33c12.4 (ENSSDUG00000003213) DCTN1 (ENSSDUG00000003271) ENSSDUG00000003470 SLC39A8 (ENSSDUG00000003482) manba (ENSSDUG00000003513) ube2d3 (ENSSDUG00000003535) Yellowtail amberjack MODERN SPECIES 3190 gfra4a (ENSSLDG00000008998) ap5s1 (ENSSLDG00000009012) #19 CDC25B (ENSSLDG00000009029) #20 noto (ENSSLDG00000009076) #21 emx1 (ENSSLDG00000009098) #22 sfxn5a (ENSSLDG00000009102) #23 ENSSLDG00000009115 #24 ENSSLDG00000009134 #25 ENSSLDG00000009154 #26 pank2 (ENSSLDG00000009186) #27 loxl3b (ENSSLDG00000009269) #28 mrps26 (ENSSLDG00000009389) #29 si:dkey-33c12.3 (ENSSLDG00000009400) #30 ENSSLDG00000009413 #31 si:dkey-33c12.4 (ENSSLDG00000009448) DCTN1 (ENSSLDG00000009480) ENSSLDG00000009537 SLC39A8 (ENSSLDG00000009554) manba (ENSSLDG00000009596) ube2d3 (ENSSLDG00000009717) Barramundi perch MODERN SPECIES 223 gfra4a (ENSLCAG00010013174) ap5s1 (ENSLCAG00010013173) #19 ENSLCAG00010013171 #20 noto (ENSLCAG00010013170) #21 emx1 (ENSLCAG00010013168) #22 sfxn5a (ENSLCAG00010013167) #23 ENSLCAG00010013165 #24 ENSLCAG00010013161 ENSLCAG00010013158 #26 pank2 (ENSLCAG00010013156) #27 loxl3b (ENSLCAG00010013151) #28 mrps26 (ENSLCAG00010013147) #29 si:dkey-33c12.3 (ENSLCAG00010013146) #30 ENSLCAG00010013144 #31 si:dkey-33c12.4 (ENSLCAG00010013141) DCTN1 (ENSLCAG00010012467) ENSLCAG00010012243 SLC39A8 (ENSLCAG00010012240) manba (ENSLCAG00010012237) ube2d3 (ENSLCAG00010012001)