Murinae	ANCESTRAL SPECIES	4	ENSGT00940000154148.a.b	ENSGT00940000153710.a	ENSGT01030000234575.d.c	ENSGT00940000161863	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000005650	ENSGT00390000010888	ENSGT00510000047418	ENSGT00390000017284.a.b	ENSGT00940000153322.A	ENSGT00940000156187	ENSGT00800000124060.A.a	ENSGT00390000005739.a.a #19	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B #25	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a.h	ENSGT00950000182932.A.a.g.e.a.a.a	ENSGT00950000182932.A.a.g.e.a.b	ENSGT00950000182932.A.a.g.e.a.a.b	ENSGT00950000182932.A.a.g.e.b	ENSGT00390000012942
Mus	ANCESTRAL SPECIES	12	ENSGT00940000154148.a.b	ENSGT00940000153710.a	ENSGT01030000234575.d.c	ENSGT00940000161863	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000005650	ENSGT00390000010888	ENSGT00510000047418	ENSGT00390000017284.a.b	ENSGT00940000153322.A	ENSGT00940000156187	ENSGT00800000124060.A.a	ENSGT00390000005739.a.a #19	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B #25	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a.h	ENSGT00950000182932.A.a.g.e.a.a.a	ENSGT00950000182932.A.a.g.e.a.b	ENSGT00950000182932.A.a.g.e.a.a.b.b	ENSGT00950000182932.A.a.g.e.a.a.b.a	ENSGT00950000182932.A.a.g.e.b
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000154148.a.b	ENSGT00940000153710.a	ENSGT01030000234575.d.c	ENSGT00940000161863	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000005650	ENSGT00390000010888	ENSGT00510000047418	ENSGT00390000017284.a.b	ENSGT00940000153322.A	ENSGT00940000156187	ENSGT00800000124060.A.a	ENSGT00390000005739.a.a #19	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B #25	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a.h	ENSGT00950000182932.A.a.g.e.a.a.a	ENSGT00950000182932.A.a.g.e.a.b	ENSGT00950000182932.A.a.g.e.a.a.b.b	ENSGT00950000182932.A.a.g.e.a.a.b.a	ENSGT00950000182932.A.a.g.e.b
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000154148.a.b	ENSGT00940000153710.a	ENSGT01030000234575.d.c	ENSGT00940000161863	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000005650	ENSGT00390000010888	ENSGT00510000047418	ENSGT00390000017284.a.b	ENSGT00940000153322.A	ENSGT00940000156187	ENSGT00800000124060.A.a	ENSGT00390000005739.a.a #19	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B #25	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a.h.a.b	ENSGT00950000182932.A.a.h.a.a.b	ENSGT00950000182932.A.a.g.e.a.a.a	ENSGT00950000182932.A.a.g.e.a.b	ENSGT00950000182932.A.a.g.e.a.a.b.b	ENSGT00950000182932.A.a.g.e.a.a.b.a
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000154148.a.b	ENSGT00940000153710.a	ENSGT01030000234575.d.c	ENSGT00940000161863	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000005650	ENSGT00390000010888	ENSGT00510000047418	ENSGT00390000017284.a.b	ENSGT00940000153322.A	ENSGT00940000156187	ENSGT00800000124060.A.a	ENSGT00390000005739.a.a #19	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B #25	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a.h.a.a.a	ENSGT00950000182932.A.a.g.e.a.a.a	ENSGT00950000182932.A.a.g.e.a.b	ENSGT00950000182932.A.a.g.e.a.a.b.a	ENSGT00950000182932.A.a.g.e.b	ENSGT00390000012942
Steppe mouse	MODERN SPECIES	2735													Exoc6b (ENSMSIG00000032106) #19	ENSMSIG00000032105 #20	Spr (ENSMSIG00000032103) #21	Emx1 (ENSMSIG00000032101) #22	Sfxn5 (ENSMSIG00000032100) #23	Rab11fip5 (ENSMSIG00000032098) #24	Noto (ENSMSIG00000032097) #25	Smyd5 (ENSMSIG00000032096) #26	Pradc1 (ENSMSIG00000032095) #27	Cct7 (ENSMSIG00000032094) #28	Fbxo41 (ENSMSIG00000032093) #29	Egr4 (ENSMSIG00000032092) #30	Alms1 (ENSMSIG00000032091) #31
spretus	MODERN SPECIES	15	Actg2 (MGP_SPRETEiJ_G0029564)	Stambp (MGP_SPRETEiJ_G0029565)	Clec4f (MGP_SPRETEiJ_G0029566)	Cd207 (MGP_SPRETEiJ_G0029567)	Vax2 (MGP_SPRETEiJ_G0029568)	Atp6v1b1 (MGP_SPRETEiJ_G0029569)	Ankrd53 (MGP_SPRETEiJ_G0029570)	Tex261 (MGP_SPRETEiJ_G0029571)	Nagk (MGP_SPRETEiJ_G0029572)	Paip2b (MGP_SPRETEiJ_G0029573)	Zfp638 (MGP_SPRETEiJ_G0029574)	Dysf (MGP_SPRETEiJ_G0029575)	Cyp26b1 (MGP_SPRETEiJ_G0029576)	Exoc6b (MGP_SPRETEiJ_G0029577) #19	Spr (MGP_SPRETEiJ_G0029579) #21	Emx1 (MGP_SPRETEiJ_G0029580) #22	Sfxn5 (MGP_SPRETEiJ_G0029581) #23	Rab11fip5 (MGP_SPRETEiJ_G0029582) #24	Noto (MGP_SPRETEiJ_G0029583) #25	Smyd5 (MGP_SPRETEiJ_G0029584) #26	Pradc1 (MGP_SPRETEiJ_G0029585) #27	Cct7 (MGP_SPRETEiJ_G0029586) #28	Fbxo41 (MGP_SPRETEiJ_G0029587) #29	Egr4 (MGP_SPRETEiJ_G0029588) #30	Alms1 (MGP_SPRETEiJ_G0029589) #31	Nat8f6 (MGP_SPRETEiJ_G0029590)	MGP_SPRETEiJ_G0029591	MGP_SPRETEiJ_G0029592	Nat8f5 (MGP_SPRETEiJ_G0029593)	Nat8 (MGP_SPRETEiJ_G0029594)	MGP_SPRETEiJ_G0029595
Mouse	MODERN SPECIES	15	Actg2 (ENSMUSG00000059430)	Stambp (ENSMUSG00000006906)	Clec4f (ENSMUSG00000014542)	Cd207 (ENSMUSG00000034783)	Vax2 (ENSMUSG00000034777)	Atp6v1b1 (ENSMUSG00000006269)	Ankrd53 (ENSMUSG00000014747)	Tex261 (ENSMUSG00000014748)	Nagk (ENSMUSG00000034744)	Paip2b (ENSMUSG00000045896)	Zfp638 (ENSMUSG00000030016)	Dysf (ENSMUSG00000033788)	Cyp26b1 (ENSMUSG00000063415)	Exoc6b (ENSMUSG00000033769) #19	Spr (ENSMUSG00000033735) #21	Emx1 (ENSMUSG00000033726) #22	Sfxn5 (ENSMUSG00000033720) #23	Rab11fip5 (ENSMUSG00000051343) #24	Noto (ENSMUSG00000068302) #25	Smyd5 (ENSMUSG00000033706) #26	Pradc1 (ENSMUSG00000030008) #27	Cct7 (ENSMUSG00000030007) #28	Fbxo41 (ENSMUSG00000047013) #29	Egr4 (ENSMUSG00000071341) #30	Alms1 (ENSMUSG00000063810) #31	Nat8f7 (ENSMUSG00000089694)	Nat8f3 (ENSMUSG00000051262)	Nat8f6 (ENSMUSG00000079495)	Nat8f5 (ENSMUSG00000079494)	Nat8 (ENSMUSG00000030004)	Nat8f2 (ENSMUSG00000033634)
Ryukyu mouse	MODERN SPECIES	15	Actg2 (MGP_CAROLIEiJ_G0028558)	Stambp (MGP_CAROLIEiJ_G0028559)	Clec4f (MGP_CAROLIEiJ_G0028560)	Cd207 (MGP_CAROLIEiJ_G0028561)	Vax2 (MGP_CAROLIEiJ_G0028562)	Atp6v1b1 (MGP_CAROLIEiJ_G0028563)	Ankrd53 (MGP_CAROLIEiJ_G0028564)	Tex261 (MGP_CAROLIEiJ_G0028565)	Nagk (MGP_CAROLIEiJ_G0028566)	Paip2b (MGP_CAROLIEiJ_G0028567)	Zfp638 (MGP_CAROLIEiJ_G0028568)	Dysf (MGP_CAROLIEiJ_G0028569)	Cyp26b1 (MGP_CAROLIEiJ_G0028570)	Exoc6b (MGP_CAROLIEiJ_G0028571) #19	MGP_CAROLIEiJ_G0028572 #21	Emx1 (MGP_CAROLIEiJ_G0028573) #22	Sfxn5 (MGP_CAROLIEiJ_G0028574) #23	Rab11fip5 (MGP_CAROLIEiJ_G0028575) #24	Noto (MGP_CAROLIEiJ_G0028576) #25	Smyd5 (MGP_CAROLIEiJ_G0028577) #26	MGP_CAROLIEiJ_G0028578 #27	MGP_CAROLIEiJ_G0028579 #28	Fbxo41 (MGP_CAROLIEiJ_G0028580) #29	Egr4 (MGP_CAROLIEiJ_G0028581) #30	MGP_CAROLIEiJ_G0028582 #31	MGP_CAROLIEiJ_G0028583	MGP_CAROLIEiJ_G0028585	MGP_CAROLIEiJ_G0028584	Nat8f1 (MGP_CAROLIEiJ_G0028586)	MGP_CAROLIEiJ_G0028587	MGP_CAROLIEiJ_G0028588
Shrew mouse	MODERN SPECIES	11	Actg2 (MGP_PahariEiJ_G0022293)	Stambp (MGP_PahariEiJ_G0022294)	Clec4f (MGP_PahariEiJ_G0022295)	Cd207 (MGP_PahariEiJ_G0022296)	Vax2 (MGP_PahariEiJ_G0022297)	Atp6v1b1 (MGP_PahariEiJ_G0022298)	Ankrd53 (MGP_PahariEiJ_G0022299)	Tex261 (MGP_PahariEiJ_G0022300)	Nagk (MGP_PahariEiJ_G0022301)	Paip2b (MGP_PahariEiJ_G0022302)	Zfp638 (MGP_PahariEiJ_G0022303)	Dysf (MGP_PahariEiJ_G0022304)	Cyp26b1 (MGP_PahariEiJ_G0022305)	Exoc6b (MGP_PahariEiJ_G0022306) #19	Spr (MGP_PahariEiJ_G0022307) #21	Emx1 (MGP_PahariEiJ_G0022308) #22	Sfxn5 (MGP_PahariEiJ_G0022309) #23	Rab11fip5 (MGP_PahariEiJ_G0022310) #24	Noto (MGP_PahariEiJ_G0022311) #25	Smyd5 (MGP_PahariEiJ_G0022312) #26	Cct7 (MGP_PahariEiJ_G0022313) #28	Fbxo41 (MGP_PahariEiJ_G0022314) #29	Egr4 (MGP_PahariEiJ_G0022315) #30	Alms1 (MGP_PahariEiJ_G0022316) #31	MGP_PahariEiJ_G0022317	MGP_PahariEiJ_G0022318	MGP_PahariEiJ_G0022319	Nat8 (MGP_PahariEiJ_G0022320)	Dusp11 (MGP_PahariEiJ_G0022321)	Tprkb (MGP_PahariEiJ_G0022322)	Nat8f1 (MGP_PahariEiJ_G0022323)
Rat	MODERN SPECIES	14	Stambp (ENSRNOG00000012227)	Clec4f (ENSRNOG00000013137)	Cd207 (ENSRNOG00000013222)	Vax2 (ENSRNOG00000013261)	Atp6v1b1 (ENSRNOG00000013573)	Tex261 (ENSRNOG00000013712)	Ankrd53 (ENSRNOG00000021402)	Nagk (ENSRNOG00000013911)	Paip2b (ENSRNOG00000070386)	Zfp638 (ENSRNOG00000014501)	Dysf (ENSRNOG00000032788)	Cyp26b1 (ENSRNOG00000015076)	Exoc6b (ENSRNOG00000059615) #19	Spr (ENSRNOG00000015455) #21	Spr-ps1 (ENSRNOG00000028235) #21	Emx1 (ENSRNOG00000015493) #22	Sfxn5 (ENSRNOG00000037871) #23	Rab11fip5 (ENSRNOG00000056009) #24	Noto (ENSRNOG00000037863) #25	Smyd5 (ENSRNOG00000015589) #26	Pradc1 (ENSRNOG00000050483) #27	Cct7 (ENSRNOG00000015630) #28	Fbxo41 (ENSRNOG00000033202) #29	Egr4 (ENSRNOG00000015719) #30	Alms1 (ENSRNOG00000022343) #31	Nat8f3 (ENSRNOG00000067962)	Nat8f5 (ENSRNOG00000015768)	Nat8 (ENSRNOG00000063398)	Nat8f2 (ENSRNOG00000069710)	Nat8f4 (ENSRNOG00000070875)	Nat8f1 (ENSRNOG00000015799)