Pecora	ANCESTRAL SPECIES	5	ENSGT00940000159299	ENSGT00440000033552	ENSGT01030000234575.d.c #7	ENSGT00940000161863 #8	ENSGT00940000161043 #9	ENSGT00940000161413 #10	ENSGT00390000005650	ENSGT00390000010888.d ##11	ENSGT00510000047418 #12	ENSGT00390000017284.a.b #13	ENSGT00940000153322.A #14	ENSGT00940000156187 #16	ENSGT00800000124060.A.a #17	ENSGT00390000005739.a.a #18	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a #32	ENSGT00390000012942.h #33	ENSGT00940000155847 #34	ENSGT00390000014208	ENSGT00940000153710.a #35	ENSGT00940000154148.a.b #36
Percora_a	ANCESTRAL SPECIES	13	ENSGT00940000159299	ENSGT00440000033552	ENSGT01030000234575.d.c #7	ENSGT00940000161863 #8	ENSGT00940000161043 #9	ENSGT00940000161413 #10	ENSGT00390000005650	ENSGT00390000010888.d ##11	ENSGT00510000047418 #12	ENSGT00390000017284.a.b #13	ENSGT00940000153322.A #14	ENSGT00940000156187 #16	ENSGT00800000124060.A.a #17	ENSGT00390000005739.a.a #18	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a #32	ENSGT00390000012942.h #33	ENSGT00940000155847 #34	ENSGT00390000014208	ENSGT00940000153710.a #35	ENSGT00940000154148.a.b #36
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000159299	ENSGT00440000033552	ENSGT01030000234575.d.c #7	ENSGT00940000161863 #8	ENSGT00940000161043 #9	ENSGT00940000161413 #10	ENSGT00390000005650	ENSGT00390000010888.d ##11	ENSGT00510000047418 #12	ENSGT00390000017284.a.b #13	ENSGT00940000153322.A #14	ENSGT00940000156187 #16	ENSGT00800000124060.A.a #17	ENSGT00390000005739.a.a #18	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a #32	ENSGT00390000012942.h #33	ENSGT00940000155847 #34	ENSGT00390000014208	ENSGT00940000153710.a #35	ENSGT00940000154148.a.b #36
Caprinae	ANCESTRAL SPECIES	9	ENSGT00940000159299	ENSGT00440000033552	ENSGT01030000234575.d.c #7	ENSGT00940000161863 #8	ENSGT00940000161043 #9	ENSGT00940000161413 #10	ENSGT00390000005650	ENSGT00390000010888.c.a #11	ENSGT00510000047418 #12	ENSGT00390000017284.a.b #13	ENSGT00940000153322.A #14	ENSGT00940000156187 #16	ENSGT00800000124060.A.a #17	ENSGT00390000005739.a.a #18	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000154361.B	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a #32	ENSGT00390000012942.h #33	ENSGT00940000155847 #34	ENSGT00390000014208	ENSGT00940000153710.a #35	ENSGT00940000154148.a.b #36
Goat	MODERN SPECIES	2	CLEC4F (ENSCHIG00000021250) #7	CD207 (ENSCHIG00000009900) #8	VAX2 (ENSCHIG00000011015) #9	ATP6V1B1 (ENSCHIG00000014286) #10	TEX261 (ENSCHIG00000009683) #11	NAGK (ENSCHIG00000025409) #12	PAIP2B (ENSCHIG00000021303) #13	ENSCHIG00000003741 #14	ENSCHIG00000022714 #15	DYSF (ENSCHIG00000007595) #16	CYP26B1 (ENSCHIG00000017070) #17	ENSCHIG00000016045 #18	ENSCHIG00000017225 #19	ENSCHIG00000020964 #20	SPR (ENSCHIG00000024080) #21	EMX1 (ENSCHIG00000011767) #22	SFXN5 (ENSCHIG00000019942) #23	ENSCHIG00000015693 #24	ENSCHIG00000017682 #25	SMYD5 (ENSCHIG00000009046) #26	PRADC1 (ENSCHIG00000009849) #27	CCT7 (ENSCHIG00000022849) #28	FBXO41 (ENSCHIG00000021300) #29	EGR4 (ENSCHIG00000013591) #30	ALMS1 (ENSCHIG00000013766) #31	ENSCHIG00000008140 #32	TPRKB (ENSCHIG00000022063) #33	DUSP11 (ENSCHIG00000026150) #34	STAMBP (ENSCHIG00000025246) #35	ACTG2 (ENSCHIG00000009143) #36	DGUOK (ENSCHIG00000025152) #37
Rambouillet Sheep	MODERN SPECIES	19	ADD2 (ENSOARG00020005142)	FIGLA (ENSOARG00020005437)	ENSOARG00020005471 #7	CD207 (ENSOARG00020005507) #8	VAX2 (ENSOARG00020005545) #9	ATP6V1B1 (ENSOARG00020005560) #10	ANKRD53 (ENSOARG00020005675)	TEX261 (ENSOARG00020005704) #11	NAGK (ENSOARG00020005719) #12	PAIP2B (ENSOARG00020005747) #13	DYSF (ENSOARG00020005927) #16	CYP26B1 (ENSOARG00020007013) #17	EXOC6B (ENSOARG00020007215) #18	ENSOARG00020007772	SPR (ENSOARG00020007832) #21	EMX1 (ENSOARG00020007856) #22	SFXN5 (ENSOARG00020007916) #23	ENSOARG00020008104 #24	NOTO (ENSOARG00020008177)	SMYD5 (ENSOARG00020008246) #26	PRADC1 (ENSOARG00020008311) #27	CCT7 (ENSOARG00020008379) #28	FBXO41 (ENSOARG00020008548) #29	EGR4 (ENSOARG00020008633) #30	ALMS1 (ENSOARG00020008667) #31	ENSOARG00020009085 #32	TPRKB (ENSOARG00020009150) #33	DUSP11 (ENSOARG00020009238) #34	ENSOARG00020009509	C2orf78 (ENSOARG00020009560)	STAMBP (ENSOARG00020009700) #35
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000159299	ENSGT00440000033552	ENSGT01030000234575.d.c #7	ENSGT00940000161863 #8	ENSGT00940000161043 #9	ENSGT00940000161413 #10	ENSGT00390000005650	ENSGT00390000010888.d ##11	ENSGT00510000047418 #12	ENSGT00390000017284.a.b #13	ENSGT00940000153322.A #14	ENSGT00940000156187 #16	ENSGT00800000124060.A.a #17	ENSGT00390000005739.a.a #18	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000158351.v.b.a ##25	ENSGT00940000154361.B	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a #32	ENSGT00390000012942.h #33	ENSGT00940000155847 #34	ENSGT00390000014208	ENSGT00940000153710.a #35
American bison	MODERN SPECIES	3359	TGFA (ENSBBBG00000004652)	ADD2 (ENSBBBG00000018738)	CLEC4F (ENSBBBG00000004688) #7	CD207 (ENSBBBG00000018751) #8	VAX2 (ENSBBBG00000018769) #9	ATP6V1B1 (ENSBBBG00000018794) #10	ANKRD53 (ENSBBBG00000018807)	TEX261 (ENSBBBG00000018828) ##11	NAGK (ENSBBBG00000018876) #12	PAIP2B (ENSBBBG00000004763) #13	ZNF638 (ENSBBBG00000004788) #14	DYSF (ENSBBBG00000004956) #16	CYP26B1 (ENSBBBG00000009166) #17	EXOC6B (ENSBBBG00000005014) #18	SPR (ENSBBBG00000005020) #21	EMX1 (ENSBBBG00000008305) #22	SFXN5 (ENSBBBG00000019365) #23	ENSBBBG00000019370 #24	ENSBBBG00000009181 ##25	SMYD5 (ENSBBBG00000019385) #26	PRADC1 (ENSBBBG00000007274) #27	CCT7 (ENSBBBG00000005241) #28	FBXO41 (ENSBBBG00000005271) #29	EGR4 (ENSBBBG00000019517) #30	ALMS1 (ENSBBBG00000019633) #31	ENSBBBG00000005194 #32	TPRKB (ENSBBBG00000005177) #33	DUSP11 (ENSBBBG00000019674) #34	C2orf78 (ENSBBBG00000019690)	STAMBP (ENSBBBG00000005157) #35	ENSBBBG00000007674
Bos	ANCESTRAL SPECIES	5	ENSGT00940000159299	ENSGT00440000033552	ENSGT01030000234575.d.c #7	ENSGT00940000161863 #8	ENSGT00940000161043 #9	ENSGT00940000161413 #10	ENSGT00390000005650	ENSGT00390000010888.d ##11	ENSGT00510000047418 #12	ENSGT00390000017284.a.b #13	ENSGT00940000153322.A #14	ENSGT00940000156187 #16	ENSGT00800000124060.A.a #17	ENSGT00390000005739.a.a #18	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000158351.v.a.b #25	ENSGT00940000154361.B	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a #32	ENSGT00390000012942.h #33	ENSGT00940000155847 #34	ENSGT00390000014208	ENSGT00940000153710.a #35
Bos_b	ANCESTRAL SPECIES	9	ENSGT00940000159299	ENSGT00440000033552	ENSGT01030000234575.d.c #7	ENSGT00940000161863 #8	ENSGT00940000161043 #9	ENSGT00940000161413 #10	ENSGT00390000005650	ENSGT00390000010888.d ##11	ENSGT00510000047418 #12	ENSGT00390000017284.a.b #13	ENSGT00940000153322.A #14	ENSGT00940000156187 #16	ENSGT00800000124060.A.a #17	ENSGT00390000005739.a.a #18	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000158351.v.a.b #25	ENSGT00940000154361.B	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a #32	ENSGT00390000012942.h #33	ENSGT00940000155847 #34	ENSGT00390000014208	ENSGT00940000153710.a #35
Cow	MODERN SPECIES	2	CLEC4F (ENSBTAG00000004560) #7	CD207 (ENSBTAG00000004562) #8	VAX2 (ENSBTAG00000010605) #9	ATP6V1B1 (ENSBTAG00000010620) #10	ANKRD53 (ENSBTAG00000010623)	TEX261 (ENSBTAG00000002105) ##11	ENSBTAG00000048791	NAGK (ENSBTAG00000014668) #12	PAIP2B (ENSBTAG00000054656) #13	ZNF638 (ENSBTAG00000009242) #14	DYSF (ENSBTAG00000013290) #16	CYP26B1 (ENSBTAG00000012212) #17	ENSBTAG00000048355	EXOC6B (ENSBTAG00000020799) #18	SPR (ENSBTAG00000021961) #21	EMX1 (ENSBTAG00000001866) #22	ENSBTAG00000049635	SFXN5 (ENSBTAG00000050078) #23	RAB11FIP5 (ENSBTAG00000006162) #24	ENSBTAG00000008035 #25	NOTO (ENSBTAG00000024061)	SMYD5 (ENSBTAG00000008764) #26	PRADC1 (ENSBTAG00000008765) #27	CCT7 (ENSBTAG00000012756) #28	FBXO41 (ENSBTAG00000012759) #29	EGR4 (ENSBTAG00000024058) #30	ALMS1 (ENSBTAG00000011172) #31	ENSBTAG00000047969 #32	TPRKB (ENSBTAG00000011176) #33	DUSP11 (ENSBTAG00000033255) #34	C11H2orf78 (ENSBTAG00000039878)
Hybrid Bos Indicus	MODERN SPECIES	2	CLEC4F (ENSBIXG00005008751) #7	CD207 (ENSBIXG00005005789) #8	VAX2 (ENSBIXG00005008783) #9	ATP6V1B1 (ENSBIXG00005000269) #10	ANKRD53 (ENSBIXG00005008823)	TEX261 (ENSBIXG00005008848) ##11	NAGK (ENSBIXG00005008869) #12	PAIP2B (ENSBIXG00005008888) #13	ZNF638 (ENSBIXG00005008942) #14	DYSF (ENSBIXG00005009051) #16	CYP26B1 (ENSBIXG00005009171) #17	ENSBIXG00005000410	ENSBIXG00005009192	EXOC6B (ENSBIXG00005009364) #18	SPR (ENSBIXG00005009442) #21	EMX1 (ENSBIXG00005009453) #22	SFXN5 (ENSBIXG00005000531) #23	RAB11FIP5 (ENSBIXG00005009593) #24	ENSBIXG00005009627 ##25	NOTO (ENSBIXG00005009646)	SMYD5 (ENSBIXG00005009681) #26	PRADC1 (ENSBIXG00005009712) #27	CCT7 (ENSBIXG00005009807) #28	FBXO41 (ENSBIXG00005009845) #29	ENSBIXG00005009859	ALMS1 (ENSBIXG00005009864) #31	ENSBIXG00005000661 #32	TPRKB (ENSBIXG00005009889) #33	DUSP11 (ENSBIXG00005000676) #34	C2orf78 (ENSBIXG00005005469)	STAMBP (ENSBIXG00005010049) #35
Bos_a	ANCESTRAL SPECIES	6	ENSGT00940000159299	ENSGT00440000033552	ENSGT01030000234575.d.c #7	ENSGT00940000161863 #8	ENSGT00940000161043 #9	ENSGT00940000161413 #10	ENSGT00390000005650	ENSGT00390000010888.d ##11	ENSGT00510000047418 #12	ENSGT00390000017284.a.b #13	ENSGT00940000153322.A #14	ENSGT00940000156187 #16	ENSGT00800000124060.A.a #17	ENSGT00390000005739.a.a #18	ENSGT00440000033609 #21	ENSGT00940000161476 #22	ENSGT01030000234641.a.a #23	ENSGT00940000158783 #24	ENSGT00940000158351.v.a.b #25	ENSGT00940000154361.B	ENSGT00510000047420 #26	ENSGT00390000009837 #27	ENSGT00550000074832 #28	ENSGT00530000063713.b.a #29	ENSGT00940000162199 #30	ENSGT00940000153123.B #31	ENSGT00950000182932.A.a #32	ENSGT00390000012942.h #33	ENSGT00940000155847 #34	ENSGT00390000014208	ENSGT00940000153710.a #35
Wild yak	MODERN SPECIES	1272													ENSBMUG00000003341	ENSBMUG00000003369 #18	SPR (ENSBMUG00000003391) #21	EMX1 (ENSBMUG00000003409) #22	SFXN5 (ENSBMUG00000003469) #23	RAB11FIP5 (ENSBMUG00000003503) #24	ENSBMUG00000003534 ##25	SMYD5 (ENSBMUG00000003571) #26	PRADC1 (ENSBMUG00000003592) #27	CCT7 (ENSBMUG00000003628) #28	FBXO41 (ENSBMUG00000003663) #29	EGR4 (ENSBMUG00000003677) #30	ALMS1 (ENSBMUG00000003903) #31
Domestic yak	MODERN SPECIES	28	CLEC4F (ENSBGRG00000005694) #7	CD207 (ENSBGRG00000005678) #8	VAX2 (ENSBGRG00000005640) #9	ATP6V1B1 (ENSBGRG00000005559) #10	ANKRD53 (ENSBGRG00000005512)	TEX261 (ENSBGRG00000005392) ##11	NAGK (ENSBGRG00000005162) #12	PAIP2B (ENSBGRG00000005130) #13	ZNF638 (ENSBGRG00000004990) #14	DYSF (ENSBGRG00000003746) #16	CYP26B1 (ENSBGRG00000014376) #17	ENSBGRG00000014352	ENSBGRG00000014348	EXOC6B (ENSBGRG00000013557) #18	SPR (ENSBGRG00000013480) #21	EMX1 (ENSBGRG00000013419) #22	SFXN5 (ENSBGRG00000013201) #23	ENSBGRG00000013061 #24	ENSBGRG00000013039 #25	NOTO (ENSBGRG00000012980)	SMYD5 (ENSBGRG00000012766) #26	PRADC1 (ENSBGRG00000012675) #27	CCT7 (ENSBGRG00000012276) #28	FBXO41 (ENSBGRG00000012107) #29	EGR4 (ENSBGRG00000012063) #30	ALMS1 (ENSBGRG00000011405) #31	ENSBGRG00000011299 #32	TPRKB (ENSBGRG00000011257) #33	DUSP11 (ENSBGRG00000011168) #34	C2orf78 (ENSBGRG00000011124)	STAMBP (ENSBGRG00000010994) #35
Siberian musk deer	MODERN SPECIES	245	ATP6V1B1 (ENSMMSG00000010233) #10	ANKRD53 (ENSMMSG00000010286)	ENSMMSG00000010318 ##11	NAGK (ENSMMSG00000010350) #12	PAIP2B (ENSMMSG00000010442) #13	ENSMMSG00000010478 #14	DYSF (ENSMMSG00000010731) #16	ENSMMSG00000011602	CYP26B1 (ENSMMSG00000011619) #17	EXOC6B (ENSMMSG00000011692) #18	ENSMMSG00000011755	ENSMMSG00000011778	ENSMMSG00000011790	ENSMMSG00000011805	SPR (ENSMMSG00000011817) #21	EMX1 (ENSMMSG00000011835) #22	SFXN5 (ENSMMSG00000011865) #23	RAB11FIP5 (ENSMMSG00000011911) #24	ENSMMSG00000011960	NOTO (ENSMMSG00000011977)	SMYD5 (ENSMMSG00000012006) #26	PRADC1 (ENSMMSG00000012089) #27	CCT7 (ENSMMSG00000012134) #28	FBXO41 (ENSMMSG00000012296) #29	EGR4 (ENSMMSG00000012345) #30	ALMS1 (ENSMMSG00000012378) #31	ENSMMSG00000012460	ENSMMSG00000012476	ENSMMSG00000012487 #32	TPRKB (ENSMMSG00000012516) #33	DUSP11 (ENSMMSG00000012547) #34
Yarkand deer	MODERN SPECIES	2	CLEC4F (ENSCHYG00000016776) #7	CD207 (ENSCHYG00000016709) #8	VAX2 (ENSCHYG00000016653) #9	ATP6V1B1 (ENSCHYG00000016500) #10	ANKRD53 (ENSCHYG00000016414)	TEX261 (ENSCHYG00000016319) ##11	NAGK (ENSCHYG00000016059) #12	PAIP2B (ENSCHYG00000015921) #13	ZNF638 (ENSCHYG00000014926) #14	ENSCHYG00000014827	DYSF (ENSCHYG00000013339) #16	CYP26B1 (ENSCHYG00000013123) #17	EXOC6B (ENSCHYG00000012675) #18	ENSCHYG00000012610	SPR (ENSCHYG00000012570) #21	EMX1 (ENSCHYG00000012554) #22	SFXN5 (ENSCHYG00000011857) #23	RAB11FIP5 (ENSCHYG00000011726) #24	NOTO (ENSCHYG00000011685)	SMYD5 (ENSCHYG00000011592) #26	PRADC1 (ENSCHYG00000011521) #27	CCT7 (ENSCHYG00000011344) #28	FBXO41 (ENSCHYG00000011257) #29	EGR4 (ENSCHYG00000011226) #30	ENSCHYG00000011197	ALMS1 (ENSCHYG00000010932) #31	ENSCHYG00000010852 #32	ENSCHYG00000010826 #33	ENSCHYG00000010771	DUSP11 (ENSCHYG00000010719) #34	C2orf78 (ENSCHYG00000010488)