Euteleostomi	ANCESTRAL SPECIES	21	ENSGT00940000154593.b	ENSGT00390000011067.B	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000172426	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000002381.b
Sarcopterygii	ANCESTRAL SPECIES	27	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000172426	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000002381.b
Tetrapoda	ANCESTRAL SPECIES	16	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000172426	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000002381.b
Amniota	ANCESTRAL SPECIES	25	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000172426	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293
Mammalia	ANCESTRAL SPECIES	13	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000165027	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158 #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000175810	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Theria	ANCESTRAL SPECIES	17	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000165027	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162251	ENSGT00940000162619	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158 #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000175810	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Eutheria	ANCESTRAL SPECIES	31	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162251	ENSGT00940000162619	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000175810	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000175810	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Glires	ANCESTRAL SPECIES	6	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Kangaroo rat	MODERN SPECIES	337	Wfdc1 (ENSDORG00000011963) #7	Atp2c2 (ENSDORG00000014196) #8	Meak7 (ENSDORG00000023611) #9	ENSDORG00000024417 #10	Klhl36 (ENSDORG00000010709) #11	Usp10 (ENSDORG00000029612) #12	ENSDORG00000013840 #13	Zdhhc7 (ENSDORG00000009362) #14	6430548M08Rik (ENSDORG00000015180) #15	Gse1 (ENSDORG00000001483) #16	Gins2 (ENSDORG00000028179) #17	Emc8 (ENSDORG00000015961) #18	Cox4i1 (ENSDORG00000015962) #19	Irf8 (ENSDORG00000015963) #20	ENSDORG00000025072 #21	Foxf1 (ENSDORG00000028960) #22	ENSDORG00000024165 #23	ENSDORG00000003011 #24	Fbxo31 (ENSDORG00000003010) #25	ENSDORG00000013862 #26	Zcchc14 (ENSDORG00000013867) #27	Jph3 (ENSDORG00000025250) #28	Klhdc4 (ENSDORG00000005501) #29	ENSDORG00000014167 #30	Car5a (ENSDORG00000014169) #31	Banp (ENSDORG00000013728) #32	Zc3h18 (ENSDORG00000010090) #33	Il17c (ENSDORG00000005787) #34	Cyba (ENSDORG00000005789) #35	Mvd (ENSDORG00000005790) #36	Rnf166 (ENSDORG00000011544) #37
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Muroidea	ANCESTRAL SPECIES	19	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb.c.b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb.c.b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Golden Hamster	MODERN SPECIES	654	Wfdc1 (ENSMAUG00000014335) #7	Atp2c2 (ENSMAUG00000014637) #8	Meak7 (ENSMAUG00000011475) #9	Cotl1 (ENSMAUG00000021454) #10	Klhl36 (ENSMAUG00000009405) #11	ENSMAUG00000022219 #12	Crispld2 (ENSMAUG00000015539) #13	Zdhhc7 (ENSMAUG00000011861) #14	ENSMAUG00000022003	Gse1 (ENSMAUG00000015481) #16	ENSMAUG00000004344 #17	1190005I06Rik (ENSMAUG00000008776)	Emc8 (ENSMAUG00000008013) #18	Cox4i1 (ENSMAUG00000008155) #19	Irf8 (ENSMAUG00000014953) #21	Foxf1 (ENSMAUG00000011152) #22	Mthfsd (ENSMAUG00000007528) #23	Foxc2 (ENSMAUG00000009373)	Foxl1 (ENSMAUG00000009223)	1700018B08Rik (ENSMAUG00000007616) #24	Fbxo31 (ENSMAUG00000012180) #25	ENSMAUG00000017498 ##26	Zcchc14 (ENSMAUG00000005513) #27	Jph3 (ENSMAUG00000010275) #28	Klhdc4 (ENSMAUG00000008097) #29	Slc7a5 (ENSMAUG00000020401) #30	Car5a (ENSMAUG00000022159) #31	Banp (ENSMAUG00000008039) #32	Zfpm1 (ENSMAUG00000017930)	Trhr2 (ENSMAUG00000018412)	Zc3h18 (ENSMAUG00000015828) #33
Chinese hamster chok1gshd	MODERN SPECIES	112	Atp2c2 (ENSCGRG00001000729) #8	Meak7 (ENSCGRG00001013437) #9	Cotl1 (ENSCGRG00001016437) #10	Klhl36 (ENSCGRG00001012498) #11	Usp10 (ENSCGRG00001016659) #12	Crispld2 (ENSCGRG00001013763) #13	Zdhhc7 (ENSCGRG00001018537) #14	6430548M08Rik (ENSCGRG00001012987) #15	Cibar2 (ENSCGRG00001022439)	Gse1 (ENSCGRG00001008954) #16	ENSCGRG00001025043 #17	1190005I06Rik (ENSCGRG00001014481)	ENSCGRG00001023203 #18	Cox4i1 (ENSCGRG00001018081) #19	Irf8 (ENSCGRG00001014127) #21	Foxf1 (ENSCGRG00001012787) #22	Mthfsd (ENSCGRG00001017690) #23	Foxc2 (ENSCGRG00001011497)	Foxl1 (ENSCGRG00001003256)	1700018B08Rik (ENSCGRG00001019288) #24	Fbxo31 (ENSCGRG00001002629) #25	ENSCGRG00001016025 ##26	Zcchc14 (ENSCGRG00001019291) #27	Jph3 (ENSCGRG00001004788) #28	Klhdc4 (ENSCGRG00001013931) #29	Slc7a5 (ENSCGRG00001021000) #30	Car5a (ENSCGRG00001021706) #31	Banp (ENSCGRG00001012363) #32	Zfp469 (ENSCGRG00001002538)	Zfpm1 (ENSCGRG00001021400)	Trhr2 (ENSCGRG00001001827)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb.c.b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Prairie vole	MODERN SPECIES	12	Meak7 (ENSMOCG00000006094) #9	Cotl1 (ENSMOCG00000015249) #10	Klhl36 (ENSMOCG00000015455) #11	ENSMOCG00000016451 #12	Galnt2 (ENSMOCG00000010754)	Crispld2 (ENSMOCG00000019662) #13	Zdhhc7 (ENSMOCG00000017050) #14	6430548M08Rik (ENSMOCG00000013698) #15	ENSMOCG00000016082	Gse1 (ENSMOCG00000019792) #16	Gins2 (ENSMOCG00000005463) #17	1190005I06Rik (ENSMOCG00000019559)	Emc8 (ENSMOCG00000009432) #18	Cox4i1 (ENSMOCG00000003253) #19	Irf8 (ENSMOCG00000016592) #21	Foxf1 (ENSMOCG00000020101) #22	Mthfsd (ENSMOCG00000004916) #23	1700018B08Rik (ENSMOCG00000003707) #24	Fbxo31 (ENSMOCG00000007047) #25	ENSMOCG00000012705 ##26	Zcchc14 (ENSMOCG00000021269) #27	Jph3 (ENSMOCG00000010353) #28	Klhdc4 (ENSMOCG00000015384) #29	ENSMOCG00000022244	Slc7a5 (ENSMOCG00000011349) #30	Car5a (ENSMOCG00000017487) #31	Banp (ENSMOCG00000015773) #32	Zfpm1 (ENSMOCG00000001709)	Trhr2 (ENSMOCG00000009584)	Zc3h18 (ENSMOCG00000018824) #33	Il17c (ENSMOCG00000022236) #34
Northern American deer mouse	MODERN SPECIES	18	Cotl1 (ENSPEMG00000026921) #10	Klhl36 (ENSPEMG00000000651) #11	Usp10 (ENSPEMG00000000795) #12	Crispld2 (ENSPEMG00000000602) #13	Zdhhc7 (ENSPEMG00000025381) #14	ENSPEMG00000026751	6430548M08Rik (ENSPEMG00000024280) #15	Cibar2 (ENSPEMG00000023745)	Gse1 (ENSPEMG00000010493) #16	Gins2 (ENSPEMG00000024576) #17	ENSPEMG00000006069	1190005I06Rik (ENSPEMG00000013297)	Emc8 (ENSPEMG00000014006) #18	Cox4i1 (ENSPEMG00000009275) #19	Irf8 (ENSPEMG00000023561) #21	Foxf1 (ENSPEMG00000015294) #22	Mthfsd (ENSPEMG00000023762) #23	Foxc2 (ENSPEMG00000007756)	Foxl1 (ENSPEMG00000009552)	1700018B08Rik (ENSPEMG00000009394) #24	Fbxo31 (ENSPEMG00000011216) #25	ENSPEMG00000026970 ##26	Zcchc14 (ENSPEMG00000008789) #27	Jph3 (ENSPEMG00000023682) #28	Klhdc4 (ENSPEMG00000011101) #29	Slc7a5 (ENSPEMG00000023626) #30	Car5a (ENSPEMG00000023182) #31	Banp (ENSPEMG00000011431) #32	Zfp469 (ENSPEMG00000029136)	Zfpm1 (ENSPEMG00000000468)	Trhr2 (ENSPEMG00000009899)
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb.b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Mus	ANCESTRAL SPECIES	6	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb.b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933.e.b	ENSGT00390000015933.e.a	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb.b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933.e.b	ENSGT00390000015933.e.a	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb.b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Mouse	MODERN SPECIES	17	Meak7 (ENSMUSG00000034105) #9	Cotl1 (ENSMUSG00000031827) #10	Klhl36 (ENSMUSG00000031828) #11	Usp10 (ENSMUSG00000031826) #12	Crispld2 (ENSMUSG00000031825) #13	Zdhhc7 (ENSMUSG00000031823) #14	6430548M08Rik (ENSMUSG00000031824) #15	Cibar2 (ENSMUSG00000042269)	Gse1 (ENSMUSG00000031822) #16	Gins2 (ENSMUSG00000031821) #17	1190005I06Rik (ENSMUSG00000043687)	Gm27021 (ENSMUSG00000097919)	Emc8 (ENSMUSG00000031819) #18	Cox4i1 (ENSMUSG00000031818) #19	Irf8 (ENSMUSG00000041515) #21	Foxf1 (ENSMUSG00000042812) #22	Mthfsd (ENSMUSG00000031816) #23	Foxc2 (ENSMUSG00000046714)	Foxl1 (ENSMUSG00000097084)	1700018B08Rik (ENSMUSG00000031809) #24	Fbxo31 (ENSMUSG00000052934) #25	Map1lc3b (ENSMUSG00000031812)	Zcchc14 (ENSMUSG00000061410) #27	Jph3 (ENSMUSG00000025318) #28	Klhdc4 (ENSMUSG00000040263) #29	Slc7a5 (ENSMUSG00000040010) #30	Car5a (ENSMUSG00000025317) #31	Banp (ENSMUSG00000025316) #32	Zfp469 (ENSMUSG00000043903)	Zfpm1 (ENSMUSG00000049577)	Trhr2 (ENSMUSG00000039079)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933.e.b	ENSGT00390000015933.e.a	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.bb.b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
spretus	MODERN SPECIES	17	Meak7 (MGP_SPRETEiJ_G0032746) #9	Cotl1 (MGP_SPRETEiJ_G0032747) #10	Klhl36 (MGP_SPRETEiJ_G0032748) #11	Usp10 (MGP_SPRETEiJ_G0032749) #12	Crispld2 (MGP_SPRETEiJ_G0032750) #13	Zdhhc7 (MGP_SPRETEiJ_G0032751) #14	6430548M08Rik (MGP_SPRETEiJ_G0032752) #15	Cibar2 (MGP_SPRETEiJ_G0032753)	Gse1 (MGP_SPRETEiJ_G0032754) #16	Gins2 (MGP_SPRETEiJ_G0032755) #17	MGP_SPRETEiJ_G0032756	MGP_SPRETEiJ_G0032757	Emc8 (MGP_SPRETEiJ_G0032758) #18	Cox4i1 (MGP_SPRETEiJ_G0032759) #19	Irf8 (MGP_SPRETEiJ_G0032760) #21	Foxf1 (MGP_SPRETEiJ_G0032761) #22	Mthfsd (MGP_SPRETEiJ_G0032762) #23	Foxc2 (MGP_SPRETEiJ_G0032763)	Foxl1 (MGP_SPRETEiJ_G0032764)	1700018B08Rik (MGP_SPRETEiJ_G0032765) #24	Fbxo31 (MGP_SPRETEiJ_G0032766) #25	MGP_SPRETEiJ_G0032767 ##26	Zcchc14 (MGP_SPRETEiJ_G0032768) #27	Jph3 (MGP_SPRETEiJ_G0032769) #28	Klhdc4 (MGP_SPRETEiJ_G0032770) #29	Slc7a5 (MGP_SPRETEiJ_G0032771) #30	Car5a (MGP_SPRETEiJ_G0032772) #31	Banp (MGP_SPRETEiJ_G0032773) #32	Zfpm1 (MGP_SPRETEiJ_G0032774)	Trhr2 (MGP_SPRETEiJ_G0032775)	Zc3h18 (MGP_SPRETEiJ_G0032776) #33
Steppe mouse	MODERN SPECIES	45										Gse1 (ENSMSIG00000016685) #16	Gins2 (ENSMSIG00000016665) #17	ENSMSIG00000016645	Emc8 (ENSMSIG00000016628) #18	Cox4i1 (ENSMSIG00000016613) #19	Irf8 (ENSMSIG00000016542) #21	Foxf1 (ENSMSIG00000016514) #22	Mthfsd (ENSMSIG00000016360) #23	Foxc2 (ENSMSIG00000016350)	Foxl1 (ENSMSIG00000016347)	ENSMSIG00000016303 #24	Fbxo31 (ENSMSIG00000016280) #25	ENSMSIG00000016260 ##26	Zcchc14 (ENSMSIG00000016219) #27	Jph3 (ENSMSIG00000016197) #28	Klhdc4 (ENSMSIG00000016100) #29	Slc7a5 (ENSMSIG00000016074) #30	Car5a (ENSMSIG00000016047) #31	Banp (ENSMSIG00000015888) #32	Zfp469 (ENSMSIG00000015864)	Zfpm1 (ENSMSIG00000015839)	Trhr2 (ENSMSIG00000015824)
Ryukyu mouse	MODERN SPECIES	17	Meak7 (MGP_CAROLIEiJ_G0031628) #9	Cotl1 (MGP_CAROLIEiJ_G0031629) #10	Klhl36 (MGP_CAROLIEiJ_G0031630) #11	Usp10 (MGP_CAROLIEiJ_G0031631) #12	Crispld2 (MGP_CAROLIEiJ_G0031632) #13	Zdhhc7 (MGP_CAROLIEiJ_G0031633) #14	6430548M08Rik (MGP_CAROLIEiJ_G0031634) #15	Cibar2 (MGP_CAROLIEiJ_G0031635)	Gse1 (MGP_CAROLIEiJ_G0031636) #16	Gins2 (MGP_CAROLIEiJ_G0031637) #17	MGP_CAROLIEiJ_G0031638	MGP_CAROLIEiJ_G0031639	Emc8 (MGP_CAROLIEiJ_G0031640) #18	Cox4i1 (MGP_CAROLIEiJ_G0031641) #19	Irf8 (MGP_CAROLIEiJ_G0031642) #21	Foxf1 (MGP_CAROLIEiJ_G0031643) #22	Mthfsd (MGP_CAROLIEiJ_G0031644) #23	Foxc2 (MGP_CAROLIEiJ_G0031645)	Foxl1 (MGP_CAROLIEiJ_G0031646)	1700018B08Rik (MGP_CAROLIEiJ_G0031647) #24	Fbxo31 (MGP_CAROLIEiJ_G0031648) #25	MGP_CAROLIEiJ_G0031649 ##26	Zcchc14 (MGP_CAROLIEiJ_G0031650) #27	Jph3 (MGP_CAROLIEiJ_G0031651) #28	Klhdc4 (MGP_CAROLIEiJ_G0031652) #29	Slc7a5 (MGP_CAROLIEiJ_G0031653) #30	Car5a (MGP_CAROLIEiJ_G0031654) #31	Banp (MGP_CAROLIEiJ_G0031655) #32	Zfpm1 (MGP_CAROLIEiJ_G0031656)	Trhr2 (MGP_CAROLIEiJ_G0031657)	Zc3h18 (MGP_CAROLIEiJ_G0031658) #33
Shrew mouse	MODERN SPECIES	12	Meak7 (MGP_PahariEiJ_G0023226) #9	Cotl1 (MGP_PahariEiJ_G0023227) #10	Klhl36 (MGP_PahariEiJ_G0023228) #11	Usp10 (MGP_PahariEiJ_G0023229) #12	Crispld2 (MGP_PahariEiJ_G0023230) #13	Zdhhc7 (MGP_PahariEiJ_G0023231) #14	6430548M08Rik (MGP_PahariEiJ_G0023232) #15	MGP_PahariEiJ_G0023233	Gse1 (MGP_PahariEiJ_G0023234) #16	Gins2 (MGP_PahariEiJ_G0023235) #17	MGP_PahariEiJ_G0023236	MGP_PahariEiJ_G0023237	Emc8 (MGP_PahariEiJ_G0023238) #18	Cox4i1 (MGP_PahariEiJ_G0023239) #19	Irf8 (MGP_PahariEiJ_G0023240) #21	Foxf1 (MGP_PahariEiJ_G0023241) #22	Mthfsd (MGP_PahariEiJ_G0023242) #23	Foxc2 (MGP_PahariEiJ_G0023243)	Foxl1 (MGP_PahariEiJ_G0023244)	1700018B08Rik (MGP_PahariEiJ_G0023245) #24	Fbxo31 (MGP_PahariEiJ_G0023246) #25	MGP_PahariEiJ_G0023247 ##26	MGP_PahariEiJ_G0023248 #27	Jph3 (MGP_PahariEiJ_G0023249) #28	Klhdc4 (MGP_PahariEiJ_G0023250) #29	Slc7a5 (MGP_PahariEiJ_G0023251) #30	Car5a (MGP_PahariEiJ_G0023252) #31	Banp (MGP_PahariEiJ_G0023253) #32	Zfpm1 (MGP_PahariEiJ_G0023254)	Trhr2 (MGP_PahariEiJ_G0023255)	Zc3h18 (MGP_PahariEiJ_G0023256) #33
Rat	MODERN SPECIES	10	Atp2c2 (ENSRNOG00000049334) #8	Meak7 (ENSRNOG00000016224) #9	Cotl1 (ENSRNOG00000016257) #10	Klhl36 (ENSRNOG00000016422) #11	Usp10 (ENSRNOG00000016509) #12	Crispld2 (ENSRNOG00000016752) #13	Zdhhc7 (ENSRNOG00000017342) #14	RGD1304884 (ENSRNOG00000017431) #15	Cibar2 (ENSRNOG00000021714)	Gse1 (ENSRNOG00000017489) #16	Emc8 (ENSRNOG00000017654) #18	Gins2 (ENSRNOG00000017575) #17	RGD1309651 (ENSRNOG00000017646)	Cox4i1 (ENSRNOG00000017817) #19	Irf8 (ENSRNOG00000017869) #21	Foxf1 (ENSRNOG00000049906) #22	Mthfsd (ENSRNOG00000046443) #23	Foxc2 (ENSRNOG00000047446)	Foxl1 (ENSRNOG00000047125)	Nhp2-ps6 (ENSRNOG00000067354)	LOC687560 (ENSRNOG00000050028) #24	Fbxo31 (ENSRNOG00000042274) #25	Map1lc3b (ENSRNOG00000017905) ##26	Zcchc14 (ENSRNOG00000018226) #27	Jph3 (ENSRNOG00000018784) #28	Klhdc4 (ENSRNOG00000018801) #29	Slc7a5 (ENSRNOG00000018824) #30	Car5a (ENSRNOG00000019098) #31	Banp (ENSRNOG00000019140) #32	AABR07044065.1 (ENSRNOG00000028578)	ENSRNOG00000070694
Upper Galilee mountains blind mole rat	MODERN SPECIES	1108																Foxf1 (ENSNGAG00000021924) #22	Mthfsd (ENSNGAG00000001620) #23	Foxc2 (ENSNGAG00000001373)	Foxl1 (ENSNGAG00000021491)	1700018B08Rik (ENSNGAG00000008821) #24	Fbxo31 (ENSNGAG00000017629) #25	ENSNGAG00000015064 ##26	Zcchc14 (ENSNGAG00000021549) #27	Jph3 (ENSNGAG00000015022) #28	Klhdc4 (ENSNGAG00000023070) #29	Slc7a5 (ENSNGAG00000002375) #30	Car5a (ENSNGAG00000023072) #31	Banp (ENSNGAG00000022041) #32	Zfpm1 (ENSNGAG00000015027)	Trhr2 (ENSNGAG00000021694)	Zc3h18 (ENSNGAG00000011518) #33
Lesser Egyptian jerboa	MODERN SPECIES	127	Pgls (ENSJJAG00000020229)	Slc27a1 (ENSJJAG00000005144)	ENSJJAG00000000638 #10	Klhl36 (ENSJJAG00000007502) #11	ENSJJAG00000013110 #12	Crispld2 (ENSJJAG00000019183) #13	Zdhhc7 (ENSJJAG00000011006) #14	6430548M08Rik (ENSJJAG00000023275) #15	ENSJJAG00000004544	Gse1 (ENSJJAG00000023899) #16	Gins2 (ENSJJAG00000020194) #17	1190005I06Rik (ENSJJAG00000021284)	Emc8 (ENSJJAG00000008733) #18	ENSJJAG00000015382 #19	Irf8 (ENSJJAG00000022546) #21	Foxf1 (ENSJJAG00000017904) #22	Mthfsd (ENSJJAG00000014622) #23	Foxc2 (ENSJJAG00000015847)	Foxl1 (ENSJJAG00000009393)	1700018B08Rik (ENSJJAG00000023547) #24	Fbxo31 (ENSJJAG00000022900) #25	ENSJJAG00000018452 ##26	Zcchc14 (ENSJJAG00000021656) #27	Jph3 (ENSJJAG00000024319) #28	Klhdc4 (ENSJJAG00000018071) #29	Slc7a5 (ENSJJAG00000013270) #30	Car5a (ENSJJAG00000014977) #31	Banp (ENSJJAG00000006272) #32	Zfpm1 (ENSJJAG00000008137)	Trhr2 (ENSJJAG00000000896)	Zc3h18 (ENSJJAG00000024122) #33
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Hystricomorpha	ANCESTRAL SPECIES	59	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.ab ##26	ENSGT00940000154158.k.a.`b ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000014295 #30	ENSHGLG00000014744 #8	ENSHGLG00000012079 #9	COTL1 (ENSHGLG00000018790) #10	KLHL36 (ENSHGLG00000016784) #11	USP10 (ENSHGLG00000016812) #12	ZDHHC7 (ENSHGLG00000010557) #14	KIAA0513 (ENSHGLG00000044322) #15	CIBAR2 (ENSHGLG00000019087)	GSE1 (ENSHGLG00000014146) #16	GINS2 (ENSHGLG00000011513) #17	C16orf74 (ENSHGLG00000044539)	ENSHGLG00000014169 #18	COX4I1 (ENSHGLG00000040940) #19	IRF8 (ENSHGLG00000014171) #21	FOXF1 (ENSHGLG00000010618) #22	ENSHGLG00000032334 #23	FOXC2 (ENSHGLG00000021315)	FOXL1 (ENSHGLG00000045041)	FBXO31 (ENSHGLG00000013501) #25	ENSHGLG00000049746	ENSHGLG00000010832 ##26	ZCCHC14 (ENSHGLG00000012701) #27	JPH3 (ENSHGLG00000013784) #28	ENSHGLG00000018793 #29	ENSHGLG00000021108	ENSHGLG00000016630 #7	KCNG4 (ENSHGLG00000014193)	ADAD2 (ENSHGLG00000014351)	TAF1C (ENSHGLG00000019282)	HSDL1 (ENSHGLG00000014586)
Hystricomorpha_a	ANCESTRAL SPECIES	64	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.ab ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34
Guinea pig	MODERN SPECIES	345																FOXF1 (ENSCPOG00000000954) #22	MTHFSD (ENSCPOG00000040678) #23	FOXC2 (ENSCPOG00000026241)
Hystricomorpha_b	ANCESTRAL SPECIES	82	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158.k.a.ab ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34	ENSGT00390000002290 #35	ENSGT00390000015359 #36
Degu	MODERN SPECIES	256	COTL1 (ENSODEG00000004482) #10	KLHL36 (ENSODEG00000004503) #11	USP10 (ENSODEG00000004533) #12	CRISPLD2 (ENSODEG00000004620) #13	ZDHHC7 (ENSODEG00000004683) #14	KIAA0513 (ENSODEG00000004724) #15	CIBAR2 (ENSODEG00000004799)	GSE1 (ENSODEG00000004855) #16	GINS2 (ENSODEG00000004957) #17	C16orf74 (ENSODEG00000004976)	EMC8 (ENSODEG00000004987) #18	ENSODEG00000004994 #19	ENSODEG00000005004	ENSODEG00000005014	IRF8 (ENSODEG00000005035) #21	FOXF1 (ENSODEG00000003466) #22	MTHFSD (ENSODEG00000003482) #23	FOXL1 (ENSODEG00000003524)	FBXO31 (ENSODEG00000003564) #25	ENSODEG00000003687 ##26	ZCCHC14 (ENSODEG00000003749) #27	JPH3 (ENSODEG00000003822) #28	ENSODEG00000003885 #29	ENSODEG00000003363	GAS8 (ENSODEG00000003436)	DBNDD1 (ENSODEG00000003664)	ENSODEG00000003697	DEF8 (ENSODEG00000003777)	TUBB3 (ENSODEG00000003944)	TCF25 (ENSODEG00000004123)	SPIRE2 (ENSODEG00000003817)
Long-tailed chinchilla	MODERN SPECIES	248	ATP2C2 (ENSCLAG00000001971) #8	MEAK7 (ENSCLAG00000002725) #9	COTL1 (ENSCLAG00000000826) #10	KLHL36 (ENSCLAG00000000925) #11	USP10 (ENSCLAG00000001215) #12	CRISPLD2 (ENSCLAG00000000589) #13	ZDHHC7 (ENSCLAG00000000903) #14	KIAA0513 (ENSCLAG00000000984) #15	CIBAR2 (ENSCLAG00000000847)	GSE1 (ENSCLAG00000001184) #16	GINS2 (ENSCLAG00000000938) #17	C16orf74 (ENSCLAG00000001005)	EMC8 (ENSCLAG00000001317) #18	COX4I1 (ENSCLAG00000001404) #19	IRF8 (ENSCLAG00000001452) #21	FOXF1 (ENSCLAG00000000554) #22	MTHFSD (ENSCLAG00000000611) #23	FOXL1 (ENSCLAG00000000645)	FBXO31 (ENSCLAG00000000716) #25	ENSCLAG00000000783 ##26	ZCCHC14 (ENSCLAG00000001784) #27	JPH3 (ENSCLAG00000001912) #28	KLHDC4 (ENSCLAG00000002117) #29	SLC7A5 (ENSCLAG00000000815) #30	CA5A (ENSCLAG00000000828) #31	BANP (ENSCLAG00000000895) #32	ENSCLAG00000001012	ZC3H18 (ENSCLAG00000000600) #33	IL17C (ENSCLAG00000000670) #34	CYBA (ENSCLAG00000000711) #35	MVD (ENSCLAG00000000836) #36
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Eurasian red squirrel	MODERN SPECIES	8	MEAK7 (ENSSVLG00005025432) #9	COTL1 (ENSSVLG00005025422) #10	KLHL36 (ENSSVLG00005025411) #11	ENSSVLG00005025383 #12	CRISPLD2 (ENSSVLG00005025364) #13	ENSSVLG00005025342 #14	KIAA0513 (ENSSVLG00005025327) #15	CIBAR2 (ENSSVLG00005025303)	GSE1 (ENSSVLG00005025260) #16	GINS2 (ENSSVLG00005025227) #17	C16orf74 (ENSSVLG00005025197)	EMC8 (ENSSVLG00005025171) #18	COX4I1 (ENSSVLG00005025146) #19	ENSSVLG00005025133	IRF8 (ENSSVLG00005025108) #21	FOXF1 (ENSSVLG00005025093) #22	MTHFSD (ENSSVLG00005025053) #23	FOXC2 (ENSSVLG00005025014)	FOXL1 (ENSSVLG00005024997)	FBXO31 (ENSSVLG00005024985) #25	ENSSVLG00005024960 #26	ZCCHC14 (ENSSVLG00005024894) #27	JPH3 (ENSSVLG00005024840) #28	ENSSVLG00005024798	KLHDC4 (ENSSVLG00005024738) #29	SLC7A5 (ENSSVLG00005024701) #30	CA5A (ENSSVLG00005024653) #31	BANP (ENSSVLG00005024587) #32	ZFPM1 (ENSSVLG00005024272)	ZC3H18 (ENSSVLG00005024223) #33	IL17C (ENSSVLG00005024189) #34
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C.j #30	ENSGT00940000155581.C.i #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Marmotini_b	ANCESTRAL SPECIES	64	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C.j #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Arctic ground squirrel	MODERN SPECIES	254										GSE1 (ENSUPAG00010014781) #16	GINS2 (ENSUPAG00010014868) #17	C16orf74 (ENSUPAG00010014881)	EMC8 (ENSUPAG00010014887) #18	ENSUPAG00010014895 #19	IRF8 (ENSUPAG00010014927) #21	FOXF1 (ENSUPAG00010014974) #22	MTHFSD (ENSUPAG00010014981) #23	FOXC2 (ENSUPAG00010015015)	FOXL1 (ENSUPAG00010015020)	ENSUPAG00010015027 #24	FBXO31 (ENSUPAG00010015042) #25	ENSUPAG00010015075 #26	ZCCHC14 (ENSUPAG00010015093) #27	JPH3 (ENSUPAG00010015122) #28	KLHDC4 (ENSUPAG00010015135) #29	ENSUPAG00010015149 #30	ENSUPAG00010015155 #30	CA5A (ENSUPAG00010015163) #31	BANP (ENSUPAG00010015194) #32	ENSUPAG00010015213	ZFPM1 (ENSUPAG00010015217)
Lagomorpha	ANCESTRAL SPECIES	516																ENSGT00940000161035 #22	ENSGT00390000011730 #23
Rabbit	MODERN SPECIES	874																FOXF1 (ENSOCUG00000001701) #22	MTHFSD (ENSOCUG00000002484) #23
Primates	ANCESTRAL SPECIES	21	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a.h #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Lemuriformes	ANCESTRAL SPECIES	51	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a.h #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Lemuriformes_a	ANCESTRAL SPECIES	55	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a.h #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Coquerels sifaka	MODERN SPECIES	849										GSE1 (ENSPCOG00000019304) #16	GINS2 (ENSPCOG00000019376) #17	C16orf74 (ENSPCOG00000023803)	EMC8 (ENSPCOG00000025092) #18	COX4I1 (ENSPCOG00000027105) #19	IRF8 (ENSPCOG00000019371) #21	FOXF1 (ENSPCOG00000015828) #22	ENSPCOG00000016005	DDX11 (ENSPCOG00000017309)	ENSPCOG00000022755
Greater bamboo lemur	MODERN SPECIES	175	ATP2C2 (ENSPSMG00000007577) #8	MEAK7 (ENSPSMG00000007606) #9	COTL1 (ENSPSMG00000007618) #10	KLHL36 (ENSPSMG00000007630) #11	USP10 (ENSPSMG00000007686) #12	CRISPLD2 (ENSPSMG00000007743) #13	ZDHHC7 (ENSPSMG00000007762) #14	KIAA0513 (ENSPSMG00000007876) #15	CIBAR2 (ENSPSMG00000007904)	GSE1 (ENSPSMG00000007967) #16	GINS2 (ENSPSMG00000007989) #17	C16orf74 (ENSPSMG00000008029)	EMC8 (ENSPSMG00000008056) #18	COX4I1 (ENSPSMG00000008079) #19	IRF8 (ENSPSMG00000008092) #21	FOXF1 (ENSPSMG00000008099) #22	MTHFSD (ENSPSMG00000008146) #23	FOXC2 (ENSPSMG00000008184)	FOXL1 (ENSPSMG00000008188)	FBXO31 (ENSPSMG00000008219) #25	ENSPSMG00000008246 ##26	ENSPSMG00000008253	ZCCHC14 (ENSPSMG00000008326) #27	ENSPSMG00000008394	KLHDC4 (ENSPSMG00000008788) #29	SLC7A5 (ENSPSMG00000009148) #30	CA5A (ENSPSMG00000009178) #31	BANP (ENSPSMG00000009267) #32	ZNF469 (ENSPSMG00000009368)	ENSPSMG00000009376	ZC3H18 (ENSPSMG00000009510) #33
Mouse lemur	MODERN SPECIES	12	DNAAF1 (ENSMICG00000012338)	TAF1C (ENSMICG00000012355)	ADAD2 (ENSMICG00000012378)	KCNG4 (ENSMICG00000027284)	ENSMICG00000028886 #12	CRISPLD2 (ENSMICG00000002251) #13	ZDHHC7 (ENSMICG00000011194) #14	KIAA0513 (ENSMICG00000011210) #15	CIBAR2 (ENSMICG00000047164)	GSE1 (ENSMICG00000016674) #16	GINS2 (ENSMICG00000042901) #17	C16orf74 (ENSMICG00000009935)	EMC8 (ENSMICG00000010795) #18	COX4I1 (ENSMICG00000010800) #19	ENSMICG00000037961 #21	FOXF1 (ENSMICG00000034429) #22	MTHFSD (ENSMICG00000035837) #23	FOXC2 (ENSMICG00000027960)	C16orf95 (ENSMICG00000031068) #24	FBXO31 (ENSMICG00000007352) #25	ENSMICG00000042357 ##26	ZCCHC14 (ENSMICG00000034441) #27	ENSMICG00000012327	KLHDC4 (ENSMICG00000008652) #29	SLC7A5 (ENSMICG00000004514) #30	CA5A (ENSMICG00000046573) #31	BANP (ENSMICG00000006974) #32	ZNF469 (ENSMICG00000047893)	ZFPM1 (ENSMICG00000032078)	ZC3H18 (ENSMICG00000006699) #33	IL17C (ENSMICG00000006713) #34
Bushbaby	MODERN SPECIES	300											ENSOGAG00000032221 #17	C16orf74 (ENSOGAG00000010369)	EMC8 (ENSOGAG00000010372) #18	COX4I1 (ENSOGAG00000010376) #19	IRF8 (ENSOGAG00000009262) #21	FOXF1 (ENSOGAG00000011910) #22	MTHFSD (ENSOGAG00000011905) #23	FOXC2 (ENSOGAG00000026902)	FOXL1 (ENSOGAG00000011899)	ENSOGAG00000031526	FBXO31 (ENSOGAG00000004252) #25	ENSOGAG00000004256 ##26	ZCCHC14 (ENSOGAG00000029811) #27	ENSOGAG00000017093	KLHDC4 (ENSOGAG00000013497) #29	SLC7A5 (ENSOGAG00000025992) #30	CA5A (ENSOGAG00000011918) #31	BANP (ENSOGAG00000031291) #32	ZNF469 (ENSOGAG00000032140)	ENSOGAG00000034609	ZFPM1 (ENSOGAG00000028472)
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.m #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.m #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00390000009683	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.m #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00390000009683	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.m #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00390000009683	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Pan	ANCESTRAL SPECIES	19	ENSGT00940000157543 #11	ENSGT00550000074994.m #12	ENSGT00940000157410 #13	ENSGT00950000182857.a.a.b.a.r.a.a.a.a.a.b	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00390000008767.a.a.a.a.g.a	ENSGT00940000158140 #21	ENSGT00390000009683	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Chimpanzee	MODERN SPECIES	7	KLHL36 (ENSPTRG00000008420) #11	USP10 (ENSPTRG00000008421) #12	CRISPLD2 (ENSPTRG00000008422) #13	ENSPTRG00000052517	ZDHHC7 (ENSPTRG00000008424) #14	KIAA0513 (ENSPTRG00000008425) #15	CIBAR2 (ENSPTRG00000008427)	GSE1 (ENSPTRG00000008429) #16	GINS2 (ENSPTRG00000008430) #17	C16H16orf74 (ENSPTRG00000008431)	EMC8 (ENSPTRG00000008433) #18	COX4I1 (ENSPTRG00000008434) #19	ENSPTRG00000051219	IRF8 (ENSPTRG00000008435) #21	ENSPTRG00000049264	FOXF1 (ENSPTRG00000008439) #22	MTHFSD (ENSPTRG00000008440) #23	FOXC2 (ENSPTRG00000031133)	FOXL1 (ENSPTRG00000008442)	ENSPTRG00000043587	C16H16orf95 (ENSPTRG00000008443) #24	FBXO31 (ENSPTRG00000008444) #25	MAP1LC3B (ENSPTRG00000008445) ##26	ZCCHC14 (ENSPTRG00000008446) #27	ENSPTRG00000043945	JPH3 (ENSPTRG00000008447) #28	KLHDC4 (ENSPTRG00000008449) #29	SLC7A5 (ENSPTRG00000008450) #30	CA5A (ENSPTRG00000008452) #31	BANP (ENSPTRG00000048876) #32	ZFPM1 (ENSPTRG00000008455)
Bonobo	MODERN SPECIES	7	KLHL36 (ENSPPAG00000035707) #11	USP10 (ENSPPAG00000026477) #12	CRISPLD2 (ENSPPAG00000007486) #13	ENSPPAG00000039541	ZDHHC7 (ENSPPAG00000038789) #14	KIAA0513 (ENSPPAG00000035287) #15	CIBAR2 (ENSPPAG00000029100)	GSE1 (ENSPPAG00000043223) #16	GINS2 (ENSPPAG00000042297) #17	ENSPPAG00000042677	EMC8 (ENSPPAG00000042383) #18	COX4I1 (ENSPPAG00000040562) #19	ENSPPAG00000033468	IRF8 (ENSPPAG00000035056) #21	ENSPPAG00000030658	FOXF1 (ENSPPAG00000035527) #22	MTHFSD (ENSPPAG00000040098) #23	ENSPPAG00000029712	C16orf95 (ENSPPAG00000031275) #24	FBXO31 (ENSPPAG00000043050) #25	ENSPPAG00000030368 ##26	ZCCHC14 (ENSPPAG00000032523) #27	JPH3 (ENSPPAG00000041273) #28	KLHDC4 (ENSPPAG00000028684) #29	ENSPPAG00000026859 #30	ENSPPAG00000029889 #31	METTL9 (ENSPPAG00000033160)	IGSF6 (ENSPPAG00000040104)	OTOA (ENSPPAG00000032309)	ENSPPAG00000030703 #32	ZNF469 (ENSPPAG00000043509)
Human	MODERN SPECIES	7	ATP2C2 (ENSG00000064270) #8	MEAK7 (ENSG00000140950) #9	COTL1 (ENSG00000103187) #10	KLHL36 (ENSG00000135686) #11	USP10 (ENSG00000103194) #12	CRISPLD2 (ENSG00000103196) #13	ZDHHC7 (ENSG00000153786) #14	KIAA0513 (ENSG00000135709) #15	CIBAR2 (ENSG00000153789)	GSE1 (ENSG00000131149) #16	GINS2 (ENSG00000131153) #17	C16orf74 (ENSG00000154102)	EMC8 (ENSG00000131148) #18	COX4I1 (ENSG00000131143) #19	IRF8 (ENSG00000140968) #21	FOXF1 (ENSG00000103241) #22	MTHFSD (ENSG00000103248) #23	FOXC2 (ENSG00000176692)	FOXL1 (ENSG00000176678)	C16orf95 (ENSG00000260456) #24	ENSG00000131152	FBXO31 (ENSG00000103264) #25	MAP1LC3B (ENSG00000140941) ##26	ZCCHC14 (ENSG00000140948) #27	JPH3 (ENSG00000154118) #28	KLHDC4 (ENSG00000104731) #29	SLC7A5 (ENSG00000103257) #30	CA5A (ENSG00000174990) #31	BANP (ENSG00000172530) #32	ZNF469 (ENSG00000225614)	ZFPM1 (ENSG00000179588)
Gorilla	MODERN SPECIES	7	KLHL36 (ENSGGOG00000012990) #11	USP10 (ENSGGOG00000012792) #12	ENSGGOG00000041544 #12	CRISPLD2 (ENSGGOG00000002690) #13	ZDHHC7 (ENSGGOG00000016638) #14	KIAA0513 (ENSGGOG00000016647) #15	CIBAR2 (ENSGGOG00000016658)	GSE1 (ENSGGOG00000009055) #16	GINS2 (ENSGGOG00000009069) #17	C16orf74 (ENSGGOG00000009075)	EMC8 (ENSGGOG00000016978) #18	COX4I1 (ENSGGOG00000010047) #19	ENSGGOG00000027388	IRF8 (ENSGGOG00000028251) #21	ENSGGOG00000005492	ENSGGOG00000025357 #22	MTHFSD (ENSGGOG00000014557) #23	FOXC2 (ENSGGOG00000014561)	FOXL1 (ENSGGOG00000014569)	ENSGGOG00000040290	ENSGGOG00000039586	C16orf95 (ENSGGOG00000009383) #24	FBXO31 (ENSGGOG00000009386) #25	ENSGGOG00000037181 ##26	ZCCHC14 (ENSGGOG00000026113) #27	JPH3 (ENSGGOG00000003481) #28	ENSGGOG00000024617	KLHDC4 (ENSGGOG00000003483) #29	SLC7A5 (ENSGGOG00000024266) #30	ENSGGOG00000006678 #31	ENSGGOG00000001149 #32
Orangutan	MODERN SPECIES	7	MEAK7 (ENSPPYG00000007606) #9	COTL1 (ENSPPYG00000033065) #10	KLHL36 (ENSPPYG00000007608) #11	USP10 (ENSPPYG00000007609) #12	CRISPLD2 (ENSPPYG00000007610) #13	ZDHHC7 (ENSPPYG00000007611) #14	KIAA0513 (ENSPPYG00000007612) #15	CIBAR2 (ENSPPYG00000007613)	GSE1 (ENSPPYG00000007615) #16	GINS2 (ENSPPYG00000034717) #17	ENSPPYG00000007617	EMC8 (ENSPPYG00000007618) #18	COX4I1 (ENSPPYG00000007619) #19	IRF8 (ENSPPYG00000007620) #21	ENSPPYG00000030770	FOXF1 (ENSPPYG00000007623) #22	MTHFSD (ENSPPYG00000007624) #23	FOXC2 (ENSPPYG00000031888)	FOXL1 (ENSPPYG00000007626)	ENSPPYG00000040095	C16orf95 (ENSPPYG00000035919) #24	FBXO31 (ENSPPYG00000007627) #25	ENSPPYG00000034043 ##26	ZCCHC14 (ENSPPYG00000007629) #27	JPH3 (ENSPPYG00000007630) #28	KLHDC4 (ENSPPYG00000007631) #29	SLC7A5 (ENSPPYG00000007633) #30	CA5A (ENSPPYG00000007634) #31	BANP (ENSPPYG00000007742) #32	ZFPM1 (ENSPPYG00000007637)	ZC3H18 (ENSPPYG00000007639) #33
Gibbon	MODERN SPECIES	11	MEAK7 (ENSNLEG00000011220) #9	ENSNLEG00000011242 #10	ENSNLEG00000011244 #11	USP10 (ENSNLEG00000011245) #12	CRISPLD2 (ENSNLEG00000011301) #13	ENSNLEG00000027096	ZDHHC7 (ENSNLEG00000011337) #14	KIAA0513 (ENSNLEG00000011364) #15	ENSNLEG00000011369	GSE1 (ENSNLEG00000011377) #16	ENSNLEG00000032939 #17	C16orf74 (ENSNLEG00000011399)	EMC8 (ENSNLEG00000011401) #18	ENSNLEG00000028334 #19	IRF8 (ENSNLEG00000011429) #21	ENSNLEG00000011449 #22	MTHFSD (ENSNLEG00000035790) #23	ENSNLEG00000028606	C16orf95 (ENSNLEG00000011486) #24	ENSNLEG00000030971 #25	MAP1LC3B (ENSNLEG00000011511) ##26	ZCCHC14 (ENSNLEG00000011527) #27	ENSNLEG00000033200	ENSNLEG00000011533 #28	KLHDC4 (ENSNLEG00000011540) #29	SLC7A5 (ENSNLEG00000011583) #30	ENSNLEG00000035649 #31	ENSNLEG00000030910 #32	ENSNLEG00000000486	ZFPM1 (ENSNLEG00000000491)	ZC3H18 (ENSNLEG00000000496) #33
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00550000076295	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00910000148492	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.o #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00970000197463	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.e.b #19	ENSGT00940000158140 #21	ENSGT00550000076295	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00910000148492	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.o #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.e.b.a.a #19	ENSGT00390000002407.d.e.b.b #19	ENSGT00940000158140 #21	ENSGT00550000076295	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00910000148492	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.o #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.e.b.b #19	ENSGT00940000158140 #21	ENSGT00550000076295	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32
Olive baboon	MODERN SPECIES	9	ATP2C2 (ENSPANG00000021835) #8	MEAK7 (ENSPANG00000021837) #9	COTL1 (ENSPANG00000021500) #10	KLHL36 (ENSPANG00000001078) #11	USP10 (ENSPANG00000007753) #12	CRISPLD2 (ENSPANG00000015945) #13	ZDHHC7 (ENSPANG00000007352) #14	KIAA0513 (ENSPANG00000025133) #15	CIBAR2 (ENSPANG00000015894)	GSE1 (ENSPANG00000010331) #16	GINS2 (ENSPANG00000020355) #17	C16orf74 (ENSPANG00000030062)	ENSPANG00000042376 #18	ENSPANG00000010330 #19	IRF8 (ENSPANG00000024770) #21	FOXF1 (ENSPANG00000006104) #22	MTHFSD (ENSPANG00000021729) #23	FOXC2 (ENSPANG00000044176)	FOXL1 (ENSPANG00000037966)	ENSPANG00000006103 #24	FBXO31 (ENSPANG00000022200) #25	ENSPANG00000025529 ##26	ZCCHC14 (ENSPANG00000022199) #27	JPH3 (ENSPANG00000020690) #28	KLHDC4 (ENSPANG00000008631) #29	SLC7A5 (ENSPANG00000009779) #30	CA5A (ENSPANG00000016729) #31	BANP (ENSPANG00000011256) #32	ENSPANG00000005497	ZC3H18 (ENSPANG00000024391) #33	IL17C (ENSPANG00000023121) #34
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.o #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.e.b.b #19	ENSGT00940000158140 #21	ENSGT00550000076295	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00910000147162	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32
Sooty mangabey	MODERN SPECIES	96	MEAK7 (ENSCATG00000039082) #9	COTL1 (ENSCATG00000033835) #10	KLHL36 (ENSCATG00000034305) #11	ENSCATG00000034771 #12	CRISPLD2 (ENSCATG00000039537) #13	ZDHHC7 (ENSCATG00000034960) #14	KIAA0513 (ENSCATG00000035707) #15	CIBAR2 (ENSCATG00000032699)	GSE1 (ENSCATG00000041449) #16	GINS2 (ENSCATG00000043722) #17	C16orf74 (ENSCATG00000029585)	EMC8 (ENSCATG00000044546) #18	ENSCATG00000031532 #19	IRF8 (ENSCATG00000027145) #21	ENSCATG00000033238	FOXF1 (ENSCATG00000032711) #22	MTHFSD (ENSCATG00000029682) #23	FOXC2 (ENSCATG00000022325)	FOXL1 (ENSCATG00000022314)	ENSCATG00000030655	C16orf95 (ENSCATG00000035062) #24	FBXO31 (ENSCATG00000044685) #25	ENSCATG00000034660 ##26	ZCCHC14 (ENSCATG00000035317) #27	JPH3 (ENSCATG00000042141) #28	ENSCATG00000030332	KLHDC4 (ENSCATG00000044152) #29	SLC7A5 (ENSCATG00000030290) #30	CA5A (ENSCATG00000032976) #31	BANP (ENSCATG00000031633) #32	ZNF469 (ENSCATG00000029561)
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.o #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.e.b.a.a #19	ENSGT00940000158140 #21	ENSGT00550000076295	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00910000148492	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Pig-tailed macaque	MODERN SPECIES	150																FOXF1 (ENSMNEG00000033656) #22	MTHFSD (ENSMNEG00000035992) #23	FOXC2 (ENSMNEG00000037781)	FOXL1 (ENSMNEG00000038260)	ENSMNEG00000035207	ENSMNEG00000001683	C16orf95 (ENSMNEG00000037917) #24	FBXO31 (ENSMNEG00000044346) #25	MAP1LC3B (ENSMNEG00000035048) ##26	ZCCHC14 (ENSMNEG00000045229) #27	JPH3 (ENSMNEG00000036414) #28	KLHDC4 (ENSMNEG00000023660) #29	SLC7A5 (ENSMNEG00000043780) #30	CA5A (ENSMNEG00000032047) #31	BANP (ENSMNEG00000032736) #32	ZNF469 (ENSMNEG00000037291)
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00550000074994.o #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT01100000263493.a.b.b.a.b.a.a.a.b.b	ENSGT00940000161627.b.a.b.a.b.a.b	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.e.b.a.a #19	ENSGT01080000257579.b.b.b.b	ENSGT00940000158140 #21	ENSGT00550000076295	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00910000148492	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT01100000263539.b.a.a.a.a.a.b.a.b.b.a	ENSGT00530000065415
Rhesus	MODERN SPECIES	12	ENSMMUG00000060634	ZDHHC7 (ENSMMUG00000020674) #14	KIAA0513 (ENSMMUG00000011893) #15	CIBAR2 (ENSMMUG00000011894)	ENSMMUG00000050359	ENSMMUG00000051026	ENSMMUG00000052120	GSE1 (ENSMMUG00000020592) #16	GINS2 (ENSMMUG00000020594) #17	C20H16orf74 (ENSMMUG00000011283)	EMC8 (ENSMMUG00000006762) #18	COX4I1 (ENSMMUG00000006763) #19	ENSMMUG00000054564	IRF8 (ENSMMUG00000008125) #21	ENSMMUG00000042703	FOXF1 (ENSMMUG00000058235) #22	MTHFSD (ENSMMUG00000019500) #23	FOXC2 (ENSMMUG00000019498)	C16orf95 (ENSMMUG00000017608) #24	ENSMMUG00000063872	ENSMMUG00000017610	FBXO31 (ENSMMUG00000063535) #25	ENSMMUG00000055358	MAP1LC3B (ENSMMUG00000050432) ##26	ZCCHC14 (ENSMMUG00000017615) #27	JPH3 (ENSMMUG00000052495) #28	ENSMMUG00000063157	KLHDC4 (ENSMMUG00000022867) #29	SLC7A5 (ENSMMUG00000052851) #30	CA5A (ENSMMUG00000041867) #31	BANP (ENSMMUG00000009473) #32
Crab-eating macaque	MODERN SPECIES	12	USP10 (ENSMFAG00000003073) #12	CRISPLD2 (ENSMFAG00000012467) #13	ZDHHC7 (ENSMFAG00000042544) #14	KIAA0513 (ENSMFAG00000024723) #15	CIBAR2 (ENSMFAG00000040673)	ENSMFAG00000053025	GSE1 (ENSMFAG00000041181) #16	ENSMFAG00000054281	GINS2 (ENSMFAG00000002508) #17	ENSMFAG00000065597	ENSMFAG00000058022	EMC8 (ENSMFAG00000034372) #18	COX4I1 (ENSMFAG00000034477) #19	ENSMFAG00000058194	IRF8 (ENSMFAG00000031542) #21	FOXF1 (ENSMFAG00000039933) #22	MTHFSD (ENSMFAG00000044698) #23	ENSMFAG00000063598	ENSMFAG00000000890	ENSMFAG00000044620 #24	ENSMFAG00000038479	FBXO31 (ENSMFAG00000060056) #25	ENSMFAG00000002790 ##26	ZCCHC14 (ENSMFAG00000044504) #27	JPH3 (ENSMFAG00000042205) #28	KLHDC4 (ENSMFAG00000000253) #29	SLC7A5 (ENSMFAG00000041887) #30	CA5A (ENSMFAG00000054520) #31	BANP (ENSMFAG00000037628) #32	ENSMFAG00000061038	ENSMFAG00000036335
Vervet Monkey	MODERN SPECIES	24	MEAK7 (ENSCSAG00000003194) #9	COTL1 (ENSCSAG00000003191) #10	KLHL36 (ENSCSAG00000003184) #11	USP10 (ENSCSAG00000003178) #12	CRISPLD2 (ENSCSAG00000003164) #13	ZDHHC7 (ENSCSAG00000003161) #14	KIAA0513 (ENSCSAG00000003160) #15	CIBAR2 (ENSCSAG00000003158)	ENSCSAG00000003152	GSE1 (ENSCSAG00000003150) #16	GINS2 (ENSCSAG00000003148) #17	C16orf74 (ENSCSAG00000003147)	EMC8 (ENSCSAG00000003145) #18	COX4I1 (ENSCSAG00000003144) #19	IRF8 (ENSCSAG00000003142) #21	FOXF1 (ENSCSAG00000003141) #22	MTHFSD (ENSCSAG00000003139) #23	FOXC2 (ENSCSAG00000018476)	FOXL1 (ENSCSAG00000018478)	ENSCSAG00000003138 #24	FBXO31 (ENSCSAG00000003136) #25	MAP1LC3B (ENSCSAG00000003134) ##26	ZCCHC14 (ENSCSAG00000003131) #27	JPH3 (ENSCSAG00000003128) #28	ENSCSAG00000003126	KLHDC4 (ENSCSAG00000003123) #29	SLC7A5 (ENSCSAG00000003120) #30	ENSCSAG00000003118 #31	BANP (ENSCSAG00000003117) #32	ZNF469 (ENSCSAG00000003112)	ZFPM1 (ENSCSAG00000003107)
Rhinopithecus	ANCESTRAL SPECIES	22	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838.o.a.b #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.c #19	ENSGT00940000158140 #21	ENSGT00550000076295	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00910000146872	ENSGT00390000003910 #24	ENSGT00910000148492	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415
Golden snub-nosed monkey	MODERN SPECIES	3015	MEAK7 (ENSRROG00000017225) #9	COTL1 (ENSRROG00000029633) #10	KLHL36 (ENSRROG00000031015) #11	USP10 (ENSRROG00000005451) #12	CRISPLD2 (ENSRROG00000038410) #13	ZDHHC7 (ENSRROG00000045151) #14	KIAA0513 (ENSRROG00000042442) #15	CIBAR2 (ENSRROG00000045629)	GSE1 (ENSRROG00000044045) #16	ENSRROG00000040370 #17	C16orf74 (ENSRROG00000040651)	EMC8 (ENSRROG00000028660) #18	ENSRROG00000039551 #19	IRF8 (ENSRROG00000040814) #21	ENSRROG00000030070	FOXF1 (ENSRROG00000024990) #22	MTHFSD (ENSRROG00000045411) #23	FOXC2 (ENSRROG00000005453)	FOXL1 (ENSRROG00000015087)	ENSRROG00000030132	C16orf95 (ENSRROG00000037778) #24	ENSRROG00000036728	FBXO31 (ENSRROG00000028515) #25	ENSRROG00000006795 ##26	ZCCHC14 (ENSRROG00000040386) #27	JPH3 (ENSRROG00000033702) #28	KLHDC4 (ENSRROG00000039267) #29	SLC7A5 (ENSRROG00000037840) #30	CA5A (ENSRROG00000044182) #31	BANP (ENSRROG00000004589) #32	ZNF469 (ENSRROG00000024447)
Black snub-nosed monkey	MODERN SPECIES	172	MEAK7 (ENSRBIG00000031034) #9	COTL1 (ENSRBIG00000044789) #10	KLHL36 (ENSRBIG00000038474) #11	USP10 (ENSRBIG00000038865) #12	CRISPLD2 (ENSRBIG00000020153) #13	ZDHHC7 (ENSRBIG00000037918) #14	KIAA0513 (ENSRBIG00000031604) #15	CIBAR2 (ENSRBIG00000034906)	GSE1 (ENSRBIG00000033119) #16	ENSRBIG00000035213 #17	C16orf74 (ENSRBIG00000043760)	EMC8 (ENSRBIG00000035063) #18	COX4I1 (ENSRBIG00000032596) #19	IRF8 (ENSRBIG00000040015) #21	ENSRBIG00000022447	FOXF1 (ENSRBIG00000044551) #22	MTHFSD (ENSRBIG00000043280) #23	FOXL1 (ENSRBIG00000017663)	ENSRBIG00000035591	C16orf95 (ENSRBIG00000042782) #24	FBXO31 (ENSRBIG00000032616) #25	MAP1LC3B (ENSRBIG00000044552) ##26	ZCCHC14 (ENSRBIG00000039663) #27	JPH3 (ENSRBIG00000041867) #28	KLHDC4 (ENSRBIG00000039915) #29	SLC7A5 (ENSRBIG00000032594) #30	CA5A (ENSRBIG00000025810) #31	BANP (ENSRBIG00000034524) #32	ZNF469 (ENSRBIG00000040060)	ENSRBIG00000041824	ZC3H18 (ENSRBIG00000000680) #33
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00390000009077.ib	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a.m #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00390000009077.ib	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a.m #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Cebidae_a	ANCESTRAL SPECIES	51	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00390000009077.ib	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519.k #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a.m #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34
Capuchin	MODERN SPECIES	159	ENSCCAG00000032654 #10	KLHL36 (ENSCCAG00000029345) #11	ENSCCAG00000031361	USP10 (ENSCCAG00000020200) #12	ENSCCAG00000000464	CRISPLD2 (ENSCCAG00000030845) #13	ZDHHC7 (ENSCCAG00000037279) #14	KIAA0513 (ENSCCAG00000026703) #15	CIBAR2 (ENSCCAG00000035866)	GSE1 (ENSCCAG00000023752) #16	GINS2 (ENSCCAG00000024580) #17	C16orf74 (ENSCCAG00000000225)	EMC8 (ENSCCAG00000025936) #18	COX4I1 (ENSCCAG00000032992) #19	IRF8 (ENSCCAG00000017098) #21	FOXF1 (ENSCCAG00000023946) #22	MTHFSD (ENSCCAG00000023314) #23	FOXC2 (ENSCCAG00000032599)	ENSCCAG00000024367	ENSCCAG00000032392 #24	FBXO31 (ENSCCAG00000033481) #25	ENSCCAG00000022874 ##26	ZCCHC14 (ENSCCAG00000024606) #27	JPH3 (ENSCCAG00000019505) #28	KLHDC4 (ENSCCAG00000035306) #29	SLC7A5 (ENSCCAG00000023872) #30	CA5A (ENSCCAG00000034053) #31	BANP (ENSCCAG00000020397) #32	ZNF469 (ENSCCAG00000036599)	ZFPM1 (ENSCCAG00000036250)	ZC3H18 (ENSCCAG00000026448) #33
Bolivian squirrel monkey	MODERN SPECIES	48	MEAK7 (ENSSBOG00000028533) #9	ENSSBOG00000032622 #10	KLHL36 (ENSSBOG00000033614) #11	USP10 (ENSSBOG00000004163) #12	ENSSBOG00000031791	CRISPLD2 (ENSSBOG00000034322) #13	ZDHHC7 (ENSSBOG00000008336) #14	KIAA0513 (ENSSBOG00000036003) #15	CIBAR2 (ENSSBOG00000027622)	GSE1 (ENSSBOG00000019382) #16	GINS2 (ENSSBOG00000029439) #17	C16orf74 (ENSSBOG00000032366)	EMC8 (ENSSBOG00000029850) #18	COX4I1 (ENSSBOG00000030668) #19	IRF8 (ENSSBOG00000034631) #21	FOXF1 (ENSSBOG00000021248) #22	MTHFSD (ENSSBOG00000033851) #23	ENSSBOG00000035383	ENSSBOG00000002492	FBXO31 (ENSSBOG00000024885) #25	ENSSBOG00000035420 ##26	ZCCHC14 (ENSSBOG00000024962) #27	JPH3 (ENSSBOG00000021921) #28	KLHDC4 (ENSSBOG00000020681) #29	ENSSBOG00000013279	SLC7A5 (ENSSBOG00000028258) #30	CA5A (ENSSBOG00000036084) #31	BANP (ENSSBOG00000018903) #32	ZNF469 (ENSSBOG00000022836)	ENSSBOG00000023100	ZC3H18 (ENSSBOG00000023949) #33
Marmoset	MODERN SPECIES	12	MEAK7 (ENSCJAG00000004046) #9	COTL1 (ENSCJAG00000047974) #10	KLHL36 (ENSCJAG00000004060) #11	USP10 (ENSCJAG00000004067) #12	CRISPLD2 (ENSCJAG00000004090) #13	ENSCJAG00000076591	ZDHHC7 (ENSCJAG00000004119) #14	KIAA0513 (ENSCJAG00000004127) #15	ENSCJAG00000086310	GSE1 (ENSCJAG00000017301) #16	GINS2 (ENSCJAG00000075149) #17	ENSCJAG00000086831	EMC8 (ENSCJAG00000072941) #18	COX4I1 (ENSCJAG00000017319) #19	IRF8 (ENSCJAG00000017331) #21	FOXF1 (ENSCJAG00000041793) #22	MTHFSD (ENSCJAG00000017146) #23	FOXC2 (ENSCJAG00000017143)	FOXL1 (ENSCJAG00000040651)	ENSCJAG00000042959	C16orf95 (ENSCJAG00000004497) #24	FBXO31 (ENSCJAG00000004482) #25	ENSCJAG00000070480	ENSCJAG00000078991 ##26	ZCCHC14 (ENSCJAG00000004460) #27	JPH3 (ENSCJAG00000008801) #28	KLHDC4 (ENSCJAG00000008702) #29	ENSCJAG00000070545	SLC7A5 (ENSCJAG00000008679) #30	ENSCJAG00000078053 #31	BANP (ENSCJAG00000074926) #32
Mas night monkey	MODERN SPECIES	517	MEAK7 (ENSANAG00000037570) #9	ENSANAG00000020703 #10	KLHL36 (ENSANAG00000037280) #11	ENSANAG00000019582	USP10 (ENSANAG00000025133) #12	CRISPLD2 (ENSANAG00000027214) #13	ZDHHC7 (ENSANAG00000029724) #14	KIAA0513 (ENSANAG00000020428) #15	CIBAR2 (ENSANAG00000034815)	GSE1 (ENSANAG00000028099) #16	GINS2 (ENSANAG00000035597) #17	C16orf74 (ENSANAG00000033611)	EMC8 (ENSANAG00000032653) #18	COX4I1 (ENSANAG00000022720) #19	IRF8 (ENSANAG00000036367) #21	FOXF1 (ENSANAG00000033717) #22	MTHFSD (ENSANAG00000006858) #23	FOXC2 (ENSANAG00000037594)	ENSANAG00000009519	ENSANAG00000029721 #24	FBXO31 (ENSANAG00000031968) #25	ENSANAG00000026332 ##26	ZCCHC14 (ENSANAG00000035488) #27	JPH3 (ENSANAG00000029008) #28	KLHDC4 (ENSANAG00000026863) #29	SLC7A5 (ENSANAG00000033333) #30	CA5A (ENSANAG00000032664) #31	BANP (ENSANAG00000030439) #32	ZNF469 (ENSANAG00000035596)	ENSANAG00000001376	ZC3H18 (ENSANAG00000021325) #33
Tarsier	MODERN SPECIES	2382																FOXF1 (ENSTSYG00000028912) #22	MTHFSD (ENSTSYG00000002088) #23
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161035 #22
Hedgehog	MODERN SPECIES	14040																FOXF1 (ENSEEUG00000002843) #22
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Suina	ANCESTRAL SPECIES	36	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Pig	MODERN SPECIES	14	ATP2C2 (ENSSSCG00000002671) #8	MEAK7 (ENSSSCG00000002672) #9	COTL1 (ENSSSCG00000037645) #10	KLHL36 (ENSSSCG00000038285) #11	USP10 (ENSSSCG00000002670) #12	CRISPLD2 (ENSSSCG00000002669) #13	ZDHHC7 (ENSSSCG00000002667) #14	KIAA0513 (ENSSSCG00000002666) #15	CIBAR2 (ENSSSCG00000002668)	GSE1 (ENSSSCG00000002664) #16	GINS2 (ENSSSCG00000056302) #17	C16orf74 (ENSSSCG00000059578)	ENSSSCG00000045808 #18	COX4I1 (ENSSSCG00000029034) #19	IRF8 (ENSSSCG00000034980) #21	FOXF1 (ENSSSCG00000038460) #22	MTHFSD (ENSSSCG00000002660) #23	FOXC2 (ENSSSCG00000029296)	FOXL1 (ENSSSCG00000002658)	ENSSSCG00000002657 #24	FBXO31 (ENSSSCG00000002654) #25	MAP1LC3B (ENSSSCG00000002655) ##26	ZCCHC14 (ENSSSCG00000002656) #27	ENSSSCG00000002653	KLHDC4 (ENSSSCG00000002652) #29	SLC7A5 (ENSSSCG00000032996) #30	CA5A (ENSSSCG00000035629) #31	ENSSSCG00000058086	BANP (ENSSSCG00000020678) #32	ZFPM1 (ENSSSCG00000040875)	ZC3H18 (ENSSSCG00000035967) #33
Chacoan peccary	MODERN SPECIES	772										GSE1 (ENSCWAG00000009629) #16	GINS2 (ENSCWAG00000010032) #17	C16orf74 (ENSCWAG00000010060)	EMC8 (ENSCWAG00000010153) #18	COX4I1 (ENSCWAG00000010263) #19	IRF8 (ENSCWAG00000010302) #21	FOXF1 (ENSCWAG00000010335) #22	MTHFSD (ENSCWAG00000010357) #23	FOXC2 (ENSCWAG00000010408)	FOXL1 (ENSCWAG00000010420)	FBXO31 (ENSCWAG00000010668) #25	ENSCWAG00000010734 ##26	JPH3 (ENSCWAG00000010812) #28	KLHDC4 (ENSCWAG00000010887) #29
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Yarkand deer	MODERN SPECIES	27	MEAK7 (ENSCHYG00000001695) #9	COTL1 (ENSCHYG00000001721) #10	KLHL36 (ENSCHYG00000001747) #11	USP10 (ENSCHYG00000001782) #12	CRISPLD2 (ENSCHYG00000001868) #13	ENSCHYG00000001909	ZDHHC7 (ENSCHYG00000001925) #14	KIAA0513 (ENSCHYG00000001960) #15	CIBAR2 (ENSCHYG00000002010)	GSE1 (ENSCHYG00000002083) #16	GINS2 (ENSCHYG00000002249) #17	C16orf74 (ENSCHYG00000002276)	EMC8 (ENSCHYG00000002299) #18	ENSCHYG00000002320 #19	IRF8 (ENSCHYG00000002350) #21	FOXF1 (ENSCHYG00000002390) #22	MTHFSD (ENSCHYG00000002403) #23	FOXC2 (ENSCHYG00000002422)	FOXL1 (ENSCHYG00000002433)	FBXO31 (ENSCHYG00000002502) #25	ENSCHYG00000002530 ##26	ZCCHC14 (ENSCHYG00000002557) #27	JPH3 (ENSCHYG00000002603) #28	KLHDC4 (ENSCHYG00000002630) #29	SLC7A5 (ENSCHYG00000002670) #30	CA5A (ENSCHYG00000002697) #31	BANP (ENSCHYG00000002777) #32	ZNF469 (ENSCHYG00000002944)	ZFPM1 (ENSCHYG00000002961)	ZC3H18 (ENSCHYG00000003027) #33	CYBA (ENSCHYG00000003064) #35
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.w #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994.i #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.w #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000063823.b.a	ENSGT00730000111190.i #33	ENSGT00940000161887 #34
Goat	MODERN SPECIES	9	MEAK7 (ENSCHIG00000022723) #9	COTL1 (ENSCHIG00000023708) #10	KLHL36 (ENSCHIG00000011329) #11	ENSCHIG00000025916 #12	CRISPLD2 (ENSCHIG00000024115) #13	ZDHHC7 (ENSCHIG00000009288) #14	KIAA0513 (ENSCHIG00000006583) #15	CIBAR2 (ENSCHIG00000015967)	GSE1 (ENSCHIG00000025163) #16	GINS2 (ENSCHIG00000016347) #17	C16orf74 (ENSCHIG00000021117)	ENSCHIG00000011295	EMC8 (ENSCHIG00000020765) #18	ENSCHIG00000012976 #19	IRF8 (ENSCHIG00000027216) #21	FOXF1 (ENSCHIG00000018868) #22	MTHFSD (ENSCHIG00000010977) #23	FOXC2 (ENSCHIG00000024950)	FOXL1 (ENSCHIG00000003058)	ENSCHIG00000022152 #24	FBXO31 (ENSCHIG00000012761) #25	ENSCHIG00000026673 ##26	ZCCHC14 (ENSCHIG00000016741) #27	JPH3 (ENSCHIG00000019663) #28	KLHDC4 (ENSCHIG00000009862) #29	SLC7A5 (ENSCHIG00000019849) #30	CA5A (ENSCHIG00000006073) #31	BANP (ENSCHIG00000014438) #32	ZFPM1 (ENSCHIG00000010239)	ENSCHIG00000019746 #33	ENSCHIG00000026768 #33
Rambouillet Sheep	MODERN SPECIES	5	MEAK7 (ENSOARG00020007766) #9	COTL1 (ENSOARG00020007806) #10	KLHL36 (ENSOARG00020007848) #11	USP10 (ENSOARG00020007922) #12	ENSOARG00020008204	CRISPLD2 (ENSOARG00020008254) #13	ZDHHC7 (ENSOARG00020008568) #14	KIAA0513 (ENSOARG00020008594) #15	CIBAR2 (ENSOARG00020008666)	GSE1 (ENSOARG00020008756) #16	GINS2 (ENSOARG00020009486) #17	C16orf74 (ENSOARG00020009512)	EMC8 (ENSOARG00020009578) #18	COX4I1 (ENSOARG00020009649) #19	IRF8 (ENSOARG00020009703) #21	FOXF1 (ENSOARG00020009818) #22	ENSOARG00020009849 #23	FOXC2 (ENSOARG00020010027)	FOXL1 (ENSOARG00020010056)	ENSOARG00020010085 #24	MAP1LC3B (ENSOARG00020010316) ##26	ZCCHC14 (ENSOARG00020010371) #27	JPH3 (ENSOARG00020010721) #28	KLHDC4 (ENSOARG00020010847) #29	SLC7A5 (ENSOARG00020011537) #30	CA5A (ENSOARG00020011718) #31	BANP (ENSOARG00020011813) #32	ZFPM1 (ENSOARG00020012306)	ZC3H18 (ENSOARG00020012411) #33	IL17C (ENSOARG00020012956) #34	CYBA (ENSOARG00020013046) #35
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.w #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Bos	ANCESTRAL SPECIES	4	ENSGT00940000160275 #8	ENSGT00940000158087.h #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.w #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Bos_b	ANCESTRAL SPECIES		ENSGT00940000160275 #8	ENSGT00940000158087.h #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.w #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190 #33
Cow	MODERN SPECIES	9	ATP2C2 (ENSBTAG00000000945) #8	MEAK7 (ENSBTAG00000000946) #9	COTL1 (ENSBTAG00000016315) #10	KLHL36 (ENSBTAG00000008385) #11	USP10 (ENSBTAG00000009446) #12	CRISPLD2 (ENSBTAG00000021176) #13	ZDHHC7 (ENSBTAG00000002639) #14	KIAA0513 (ENSBTAG00000020835) #15	CIBAR2 (ENSBTAG00000020836)	GSE1 (ENSBTAG00000009918) #16	GINS2 (ENSBTAG00000044006) #17	C18H16orf74 (ENSBTAG00000052744)	EMC8 (ENSBTAG00000016075) #18	COX4I1 (ENSBTAG00000016079) #19	IRF8 (ENSBTAG00000017824) #21	FOXF1 (ENSBTAG00000000009) #22	MTHFSD (ENSBTAG00000012446) #23	FOXC2 (ENSBTAG00000012465)	FOXL1 (ENSBTAG00000040605)	FBXO31 (ENSBTAG00000002226) #25	MAP1LC3B (ENSBTAG00000011632) ##26	ZCCHC14 (ENSBTAG00000014267) #27	JPH3 (ENSBTAG00000006899) #28	KLHDC4 (ENSBTAG00000006905) #29	SLC7A5 (ENSBTAG00000006731) #30	CA5A (ENSBTAG00000010151) #31	BANP (ENSBTAG00000023745) #32	ZFPM1 (ENSBTAG00000015766)	ENSBTAG00000018507	ZC3H18 (ENSBTAG00000019520) #33	CYBA (ENSBTAG00000051907) #35
Hybrid Bos Indicus	MODERN SPECIES	9	MEAK7 (ENSBIXG00005009358) #9	ENSBIXG00005009383 #10	KLHL36 (ENSBIXG00005009403) #11	USP10 (ENSBIXG00005000501) #12	CRISPLD2 (ENSBIXG00005009518) #13	ENSBIXG00005009543	ZDHHC7 (ENSBIXG00005009575) #14	KIAA0513 (ENSBIXG00005005913) #15	CIBAR2 (ENSBIXG00005009663)	GSE1 (ENSBIXG00005009803) #16	GINS2 (ENSBIXG00005009840) #17	ENSBIXG00005000642	EMC8 (ENSBIXG00005006101) #18	COX4I1 (ENSBIXG00005000673) #19	IRF8 (ENSBIXG00005000680) #21	FOXF1 (ENSBIXG00005009962) #22	MTHFSD (ENSBIXG00005000729) #23	FOXC2 (ENSBIXG00005009988)	FOXL1 (ENSBIXG00005009998)	FBXO31 (ENSBIXG00005010145) #25	ENSBIXG00005010161 ##26	ZCCHC14 (ENSBIXG00005005695) #27	JPH3 (ENSBIXG00005010214) #28	KLHDC4 (ENSBIXG00005010241) #29	SLC7A5 (ENSBIXG00005010266) #30	CA5A (ENSBIXG00005000833) #31	BANP (ENSBIXG00005010464) #32	ZNF469 (ENSBIXG00005010535)	ZFPM1 (ENSBIXG00005010566)	ENSBIXG00005000719	IL17C (ENSBIXG00005010593) #34
Bos_a	ANCESTRAL SPECIES	22	ENSGT00940000160275 #8	ENSGT00940000158087.h #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d.w #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Domestic yak	MODERN SPECIES	12	ATP2C2 (ENSBGRG00000016156) #8	MEAK7 (ENSBGRG00000016002) #9	COTL1 (ENSBGRG00000015897) #10	KLHL36 (ENSBGRG00000015821) #11	USP10 (ENSBGRG00000015567) #12	CRISPLD2 (ENSBGRG00000015210) #13	ZDHHC7 (ENSBGRG00000015026) #14	KIAA0513 (ENSBGRG00000014870) #15	CIBAR2 (ENSBGRG00000014741)	GSE1 (ENSBGRG00000013990) #16	GINS2 (ENSBGRG00000013893) #17	ENSBGRG00000013747	EMC8 (ENSBGRG00000013626) #18	ENSBGRG00000013514 #19	IRF8 (ENSBGRG00000013321) #21	FOXF1 (ENSBGRG00000013269) #22	MTHFSD (ENSBGRG00000013171) #23	FOXC2 (ENSBGRG00000013151)	ENSBGRG00000013135	ENSBGRG00000013092 #24	FBXO31 (ENSBGRG00000012951) #25	ENSBGRG00000012865 ##26	ZCCHC14 (ENSBGRG00000012530) #27	JPH3 (ENSBGRG00000012488) #28	KLHDC4 (ENSBGRG00000012190) #29	SLC7A5 (ENSBGRG00000012015) #30	CA5A (ENSBGRG00000011715) #31	ENSBGRG00000011656	BANP (ENSBGRG00000011338) #32	ENSBGRG00000026914	ENSBGRG00000026913
American bison	MODERN SPECIES	3209	ATP2C2 (ENSBBBG00000018817) #8	MEAK7 (ENSBBBG00000018779) #9	COTL1 (ENSBBBG00000004684) #10	KLHL36 (ENSBBBG00000018733) #11	USP10 (ENSBBBG00000018715) #12	CRISPLD2 (ENSBBBG00000018674) #13	ZDHHC7 (ENSBBBG00000004615) #14	KIAA0513 (ENSBBBG00000007669) #15	CIBAR2 (ENSBBBG00000018537)	GINS2 (ENSBBBG00000008351) #17	C16orf74 (ENSBBBG00000018518)	EMC8 (ENSBBBG00000018504) #18	COX4I1 (ENSBBBG00000018492) #19	ENSBBBG00000018477 #21	ENSBBBG00000018474 #21	FOXF1 (ENSBBBG00000009137) #22	MTHFSD (ENSBBBG00000004524) #23	ENSBBBG00000018420	FBXO31 (ENSBBBG00000018416) #25	ENSBBBG00000018408 ##26	ZCCHC14 (ENSBBBG00000018388) #27	JPH3 (ENSBBBG00000018334) #28	KLHDC4 (ENSBBBG00000018309) #29	ENSBBBG00000004474 #30
Siberian musk deer	MODERN SPECIES	1191	WFDC1 (ENSMMSG00000008626) #7	ATP2C2 (ENSMMSG00000008658) #8	MEAK7 (ENSMMSG00000008702) #9	COTL1 (ENSMMSG00000008739) #10	KLHL36 (ENSMMSG00000008771) #11	USP10 (ENSMMSG00000008812) #12	CRISPLD2 (ENSMMSG00000008895) #13	ZDHHC7 (ENSMMSG00000008935) #14	KIAA0513 (ENSMMSG00000008978) #15	CIBAR2 (ENSMMSG00000009053)	GSE1 (ENSMMSG00000009112) #16	GINS2 (ENSMMSG00000009257) #17	EMC8 (ENSMMSG00000009365) #18	COX4I1 (ENSMMSG00000009407) #19	IRF8 (ENSMMSG00000009447) #21	FOXF1 (ENSMMSG00000009511) #22	MTHFSD (ENSMMSG00000009532) #23	FOXC2 (ENSMMSG00000009543)	ENSMMSG00000009558 #24	FBXO31 (ENSMMSG00000009597) #25	ENSMMSG00000009639 #26	ZCCHC14 (ENSMMSG00000009686) #27	JPH3 (ENSMMSG00000009750) #28	KLHDC4 (ENSMMSG00000009802) #29	SLC7A5 (ENSMMSG00000009999) #30	CA5A (ENSMMSG00000010041) #31	BANP (ENSMMSG00000010083) #32	ENSMMSG00000010165	ZFPM1 (ENSMMSG00000010177)	ENSMMSG00000010221	ZC3H18 (ENSMMSG00000010256) #33
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190 #33
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34
Narwhal	MODERN SPECIES	296	ATP2C2 (ENSMMNG00015002523) #8	MEAK7 (ENSMMNG00015002490) #9	COTL1 (ENSMMNG00015002467) #10	KLHL36 (ENSMMNG00015002440) #11	USP10 (ENSMMNG00015002409) #12	CRISPLD2 (ENSMMNG00015002363) #13	ZDHHC7 (ENSMMNG00015002317) #14	KIAA0513 (ENSMMNG00015002273) #15	CIBAR2 (ENSMMNG00015002218)	GSE1 (ENSMMNG00015002100) #16	GINS2 (ENSMMNG00015002044) #17	C16orf74 (ENSMMNG00015002025)	EMC8 (ENSMMNG00015002000) #18	COX4I1 (ENSMMNG00015001973) #19	IRF8 (ENSMMNG00015001938) #21	FOXF1 (ENSMMNG00015001918) #22	ENSMMNG00015001903 #23	ENSMMNG00015001883 #23	FOXC2 (ENSMMNG00015001866)	FOXL1 (ENSMMNG00015001855)	FBXO31 (ENSMMNG00015001790) #25	ENSMMNG00015001776 ##26	ZCCHC14 (ENSMMNG00015001725) #27	JPH3 (ENSMMNG00015001693) #28	KLHDC4 (ENSMMNG00015001620) #29	SLC7A5 (ENSMMNG00015001520) #30	CA5A (ENSMMNG00015001464) #31	BANP (ENSMMNG00015001362) #32	ZFPM1 (ENSMMNG00015001163)	ZC3H18 (ENSMMNG00015001109) #33	IL17C (ENSMMNG00015001065) #34
Beluga whale	MODERN SPECIES	12	TLDC1 (ENSDLEG00000000877) #9	COTL1 (ENSDLEG00000000857) #10	KLHL36 (ENSDLEG00000000834) #11	USP10 (ENSDLEG00000000628) #12	CRISPLD2 (ENSDLEG00000000525) #13	ZDHHC7 (ENSDLEG00000000499) #14	KIAA0513 (ENSDLEG00000000452) #15	ENSDLEG00000000422	ENSDLEG00000000399	GSE1 (ENSDLEG00000000266) #16	GINS2 (ENSDLEG00000000195) #17	CUNH16orf74 (ENSDLEG00000000177)	EMC8 (ENSDLEG00000000159) #18	COX4I1 (ENSDLEG00000000098) #19	IRF8 (ENSDLEG00000000063) #21	FOXF1 (ENSDLEG00000000049) #22	MTHFSD (ENSDLEG00000003253) #23	FOXC2 (ENSDLEG00000003250)	FOXL1 (ENSDLEG00000003242)	FBXO31 (ENSDLEG00000003228) #25	ENSDLEG00000003210 ##26	ZCCHC14 (ENSDLEG00000003183) #27	JPH3 (ENSDLEG00000003164) #28	KLHDC4 (ENSDLEG00000003152) #29	SLC7A5 (ENSDLEG00000003076) #30	CA5A (ENSDLEG00000003045) #31	BANP (ENSDLEG00000003013) #32	ZNF469 (ENSDLEG00000002998)	ZFPM1 (ENSDLEG00000002967)	ZC3H18 (ENSDLEG00000002941) #33	IL17C (ENSDLEG00000002917) #34
Vaquita	MODERN SPECIES	10	ATP2C2 (ENSPSNG00000019806) #8	MEAK7 (ENSPSNG00000019970) #9	COTL1 (ENSPSNG00000020002) #10	KLHL36 (ENSPSNG00000020049) #11	USP10 (ENSPSNG00000020104) #12	CRISPLD2 (ENSPSNG00000020208) #13	ZDHHC7 (ENSPSNG00000020269) #14	KIAA0513 (ENSPSNG00000020345) #15	CIBAR2 (ENSPSNG00000020425)	GSE1 (ENSPSNG00000020556) #16	GINS2 (ENSPSNG00000020636) #17	ENSPSNG00000020667	EMC8 (ENSPSNG00000020702) #18	COX4I1 (ENSPSNG00000020743) #19	IRF8 (ENSPSNG00000020794) #21	FOXF1 (ENSPSNG00000020873) #22	MTHFSD (ENSPSNG00000020898) #23	FOXC2 (ENSPSNG00000020926)	FBXO31 (ENSPSNG00000021103) #25	ZCCHC14 (ENSPSNG00000021201) #27	JPH3 (ENSPSNG00000021253) #28	KLHDC4 (ENSPSNG00000021309) #29	SLC7A5 (ENSPSNG00000021391) #30	CA5A (ENSPSNG00000021457) #31	BANP (ENSPSNG00000021545) #32	ZFPM1 (ENSPSNG00000021672)	ZC3H18 (ENSPSNG00000021780) #33	IL17C (ENSPSNG00000006202) #34	CYBA (ENSPSNG00000006234) #35	MVD (ENSPSNG00000006286) #36	ENSPSNG00000006321
Dolphin	MODERN SPECIES	3199																FOXF1 (ENSTTRG00000005881) #22	MTHFSD (ENSTTRG00000005899) #23	FOXL1 (ENSTTRG00000005926)
Sperm whale	MODERN SPECIES	8	WFDC1 (ENSPCTG00005018951) #7	ATP2C2 (ENSPCTG00005018988) #8	MEAK7 (ENSPCTG00005019208) #9	KLHL36 (ENSPCTG00005019290) #11	USP10 (ENSPCTG00005004306) #12	CRISPLD2 (ENSPCTG00005004381) #13	ZDHHC7 (ENSPCTG00005004415) #14	KIAA0513 (ENSPCTG00005004437) #15	GSE1 (ENSPCTG00005004462) #16	GINS2 (ENSPCTG00005004524) #17	C17H16orf74 (ENSPCTG00005004548)	COX4I1 (ENSPCTG00005004571) #19	ENSPCTG00005004595	ENSPCTG00005004616 #21	ENSPCTG00005004634 #21	FOXF1 (ENSPCTG00005004653) #22	MTHFSD (ENSPCTG00005004669) #23	FOXC2 (ENSPCTG00005004692)	FOXL1 (ENSPCTG00005004701)	FBXO31 (ENSPCTG00005004798) #25	ENSPCTG00005004924 ##26	ZCCHC14 (ENSPCTG00005004944) #27	JPH3 (ENSPCTG00005005015) #28	KLHDC4 (ENSPCTG00005005097) #29	CA5A (ENSPCTG00005005310) #31	BANP (ENSPCTG00005005413) #32	ENSPCTG00005005873	ZC3H18 (ENSPCTG00005005904) #33	ENSPCTG00005005941	CDH15 (ENSPCTG00005005977)	ENSPCTG00005006143
Blue whale	MODERN SPECIES	10	MEAK7 (ENSBMSG00010017185) #9	ENSBMSG00010017210	COTL1 (ENSBMSG00010017225) #10	KLHL36 (ENSBMSG00010017262) #11	USP10 (ENSBMSG00010017306) #12	CRISPLD2 (ENSBMSG00010017381) #13	ENSBMSG00010017407 #14	KIAA0513 (ENSBMSG00010017475) #15	CIBAR2 (ENSBMSG00010017523)	GSE1 (ENSBMSG00010017568) #16	GINS2 (ENSBMSG00010017702) #17	EMC8 (ENSBMSG00010017742) #18	COX4I1 (ENSBMSG00010017804) #19	ENSBMSG00010017833 #21	ENSBMSG00010017854 #21	FOXF1 (ENSBMSG00010017875) #22	ENSBMSG00010017893 #23	ENSBMSG00010017911 #23	FOXC2 (ENSBMSG00010017944)	ENSBMSG00010017965	FBXO31 (ENSBMSG00010018147) #25	ENSBMSG00010018289 #26	ZCCHC14 (ENSBMSG00010018331) #27	JPH3 (ENSBMSG00010018368) #28	KLHDC4 (ENSBMSG00010018425) #29	SLC7A5 (ENSBMSG00010018549) #30	BANP (ENSBMSG00010018677) #32	ZFPM1 (ENSBMSG00010019106)	ENSBMSG00010019135	ZC3H18 (ENSBMSG00010019187) #33	IL17C (ENSBMSG00010019217) #34
Camelidae	ANCESTRAL SPECIES	82								ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34	ENSGT00390000002290 #35
Arabian camel	MODERN SPECIES	13	ENSCDRG00005013364	GJA8 (ENSCDRG00005013341)	GJA5 (ENSCDRG00005013330)	ACP6 (ENSCDRG00005013200)	BCL9 (ENSCDRG00005013146)	CHD1L (ENSCDRG00005011376)	FMO5 (ENSCDRG00005011251)	KIAA0513 (ENSCDRG00005011026) #15	CIBAR2 (ENSCDRG00005010975)	GSE1 (ENSCDRG00005010678) #16	GINS2 (ENSCDRG00005010615) #17	ENSCDRG00005010510	EMC8 (ENSCDRG00005010434) #18	COX4I1 (ENSCDRG00005010371) #19	IRF8 (ENSCDRG00005010228) #21	FOXF1 (ENSCDRG00005010196) #22	MTHFSD (ENSCDRG00005010013) #23	FOXL1 (ENSCDRG00005009782)	ENSCDRG00005009750	FBXO31 (ENSCDRG00005009397) #25	ENSCDRG00005009276 ##26	ZCCHC14 (ENSCDRG00005009153) #27	JPH3 (ENSCDRG00005009072) #28	KLHDC4 (ENSCDRG00005008963) #29	ENSCDRG00005008900 #30	CA5A (ENSCDRG00005020666) #31	BANP (ENSCDRG00005020643) #32	ZNF469 (ENSCDRG00005020636)	ZFPM1 (ENSCDRG00005020620)	ZC3H18 (ENSCDRG00005020605) #33	IL17C (ENSCDRG00005020593) #34
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Megabat	MODERN SPECIES	3771																FOXF1 (ENSPVAG00000007544) #22	MTHFSD (ENSPVAG00000007545) #23	FOXC2 (ENSPVAG00000007546)
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Greater horseshoe bat	MODERN SPECIES	6	ATP2C2 (ENSRFEG00010010953) #8	MEAK7 (ENSRFEG00010011045) #9	COTL1 (ENSRFEG00010011063) #10	KLHL36 (ENSRFEG00010011149) #11	USP10 (ENSRFEG00010011213) #12	CRISPLD2 (ENSRFEG00010011308) #13	ZDHHC7 (ENSRFEG00010011434) #14	KIAA0513 (ENSRFEG00010011489) #15	CIBAR2 (ENSRFEG00010011597)	GSE1 (ENSRFEG00010011704) #16	GINS2 (ENSRFEG00010011819) #17	C16orf74 (ENSRFEG00010011859)	EMC8 (ENSRFEG00010011988) #18	COX4I1 (ENSRFEG00010012144) #19	IRF8 (ENSRFEG00010012214) #21	FOXF1 (ENSRFEG00010012317) #22	MTHFSD (ENSRFEG00010012359) #23	ENSRFEG00010012380	ENSRFEG00010012391	ENSRFEG00010012410	ENSRFEG00010012443	ENSRFEG00010012457	ENSRFEG00010012472 #24	FBXO31 (ENSRFEG00010012558) #25	ENSRFEG00010012638 ##26	ZCCHC14 (ENSRFEG00010012692) #27	JPH3 (ENSRFEG00010012741) #28	KLHDC4 (ENSRFEG00010012796) #29	SLC7A5 (ENSRFEG00010013067) #30	CA5A (ENSRFEG00010013141) #31	BANP (ENSRFEG00010013229) #32
Equus	ANCESTRAL SPECIES	20	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Horse	MODERN SPECIES	22	ENSECAG00000055480 #10	KLHL36 (ENSECAG00000015889) #11	USP10 (ENSECAG00000018570) #12	CRISPLD2 (ENSECAG00000024636) #13	ENSECAG00000050040	ZDHHC7 (ENSECAG00000009984) #14	KIAA0513 (ENSECAG00000015676) #15	CIBAR2 (ENSECAG00000020266)	GSE1 (ENSECAG00000022532) #16	GINS2 (ENSECAG00000024215) #17	ENSECAG00000052872	ENSECAG00000045015	COX4I1 (ENSECAG00000011722) #19	EMC8 (ENSECAG00000036711) #18	IRF8 (ENSECAG00000015449) #21	FOXF1 (ENSECAG00000020094) #22	MTHFSD (ENSECAG00000020910) #23	FOXC2 (ENSECAG00000000843)	FOXL1 (ENSECAG00000000875)	C16orf95 (ENSECAG00000001891) #24	FBXO31 (ENSECAG00000001926) #25	ENSECAG00000009892 #26	ZCCHC14 (ENSECAG00000013066) #27	JPH3 (ENSECAG00000018366) #28	KLHDC4 (ENSECAG00000019667) #29	SLC7A5 (ENSECAG00000009215) #30	CA5A (ENSECAG00000023701) #31	BANP (ENSECAG00000000420) #32	ZNF469 (ENSECAG00000039591)	ZFPM1 (ENSECAG00000028501)	ENSECAG00000010806
Donkey	MODERN SPECIES	20	MEAK7 (ENSEASG00005013769) #9	COTL1 (ENSEASG00005037760) #10	KLHL36 (ENSEASG00005013780) #11	ENSEASG00005013785 #12	CRISPLD2 (ENSEASG00005013792) #13	ZDHHC7 (ENSEASG00005013801) #14	KIAA0513 (ENSEASG00005013807) #15	CIBAR2 (ENSEASG00005013810)	GSE1 (ENSEASG00005013819) #16	GINS2 (ENSEASG00005027328) #17	ENSEASG00005031991	ENSEASG00005007667	EMC8 (ENSEASG00005030942) #18	COX4I1 (ENSEASG00005013831) #19	IRF8 (ENSEASG00005013834) #21	FOXF1 (ENSEASG00005013836) #22	MTHFSD (ENSEASG00005013838) #23	ENSEASG00005029648	FOXL1 (ENSEASG00005036622)	ENSEASG00005013844 #24	FBXO31 (ENSEASG00005013846) #25	ENSEASG00005028539 ##26	ZCCHC14 (ENSEASG00005013865) #27	JPH3 (ENSEASG00005000107) #28	KLHDC4 (ENSEASG00005000130) #29	SLC7A5 (ENSEASG00005000143) #30	CA5A (ENSEASG00005000159) #31	BANP (ENSEASG00005000313) #32	ZNF469 (ENSEASG00005024023)	ZFPM1 (ENSEASG00005032047)	ENSEASG00005000403
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.l.c.b #26	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00940000154158.l.c.a #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.l.c.b #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00940000169624
Ferret	MODERN SPECIES	203	KLHL36 (ENSMPUG00000008815) #11	USP10 (ENSMPUG00000008738) #12	CRISPLD2 (ENSMPUG00000008726) #13	ZDHHC7 (ENSMPUG00000008719) #14	KIAA0513 (ENSMPUG00000008710) #15	CIBAR2 (ENSMPUG00000008680)	ENSMPUG00000008676	ENSMPUG00000008671	ENSMPUG00000008666	GSE1 (ENSMPUG00000008651) #16	EMC8 (ENSMPUG00000008644) #18	IRF8 (ENSMPUG00000008641) #21	ENSMPUG00000008635	ENSMPUG00000008630	ENSMPUG00000008626	FOXF1 (ENSMPUG00000008619) #22	MTHFSD (ENSMPUG00000008611) #23	FOXC2 (ENSMPUG00000008606)	FOXL1 (ENSMPUG00000020009)	ENSMPUG00000008598 #24	FBXO31 (ENSMPUG00000008552) #25	ENSMPUG00000008529 #26	ZCCHC14 (ENSMPUG00000008465) #27	JPH3 (ENSMPUG00000008457) #28	ENSMPUG00000008453	KLHDC4 (ENSMPUG00000008444) #29	SLC7A5 (ENSMPUG00000008406) #30	ENSMPUG00000008402	CA5A (ENSMPUG00000008250) #31	BANP (ENSMPUG00000008244) #32	ENSMPUG00000008236
American mink	MODERN SPECIES	98	TEX43 (ENSNVIG00000007230)	DDX41 (ENSNVIG00000007244)	FAM193B (ENSNVIG00000007270)	ENSNVIG00000007295	KLHL36 (ENSNVIG00000007304) #11	USP10 (ENSNVIG00000007318) #12	CRISPLD2 (ENSNVIG00000007359) #13	ZDHC7 (ENSNVIG00000007462) #14	K0513 (ENSNVIG00000007482) #15	CIBAR2 (ENSNVIG00000007565)	GSE1 (ENSNVIG00000007606) #16	C16orf74 (ENSNVIG00000007837)	EMC8 (ENSNVIG00000007851) #18	COX4I1 (ENSNVIG00000007871) #19	IRF8 (ENSNVIG00000007895) #21	FOXF1 (ENSNVIG00000007927) #22	MTHFSD (ENSNVIG00000007938) #23	FOXC2 (ENSNVIG00000007959)	FOXL1 (ENSNVIG00000007968)	FBXO31 (ENSNVIG00000008017) #25	ENSNVIG00000008027 #26	ZCCHC14 (ENSNVIG00000008033) #27	JPH3 (ENSNVIG00000008082) #28	KLHDC4 (ENSNVIG00000008118) #29	ENSNVIG00000008218 #30	CA5A (ENSNVIG00000008240) #31	BANP (ENSNVIG00000008277) #32	ENSNVIG00000008515	ENSNVIG00000008518	ENSNVIG00000008526	ENSNVIG00000008543
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Ursus	ANCESTRAL SPECIES	26	ENSGT00390000010067.g	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00940000171092	ENSGT00730000111190 #33
American black bear	MODERN SPECIES	3630																FOXF1 (ENSUAMG00000012942) #22	MTHFSD (ENSUAMG00000012945) #23	FOXC2 (ENSUAMG00000012954)	FOXL1 (ENSUAMG00000012956)
Polar bear	MODERN SPECIES	246	MEAK7 (ENSUMAG00000007524) #9	COTL1 (ENSUMAG00000007526) #10	KLHL36 (ENSUMAG00000007528) #11	USP10 (ENSUMAG00000007552) #12	CRISPLD2 (ENSUMAG00000007624) #13	ZDHHC7 (ENSUMAG00000007637) #14	KIAA0513 (ENSUMAG00000007640) #15	CIBAR2 (ENSUMAG00000007644)	GSE1 (ENSUMAG00000007674) #16	GINS2 (ENSUMAG00000007686) #17	C16orf74 (ENSUMAG00000007695)	EMC8 (ENSUMAG00000007707) #18	COX4I1 (ENSUMAG00000007719) #19	ENSUMAG00000007722 #21	ENSUMAG00000007723 #21	FOXF1 (ENSUMAG00000007732) #22	MTHFSD (ENSUMAG00000007740) #23	FOXL1 (ENSUMAG00000007747)	ENSUMAG00000007776 #24	FBXO31 (ENSUMAG00000007788) #25	ENSUMAG00000007820 ##26	ZCCHC14 (ENSUMAG00000007878) #27	ENSUMAG00000007985 #28	KLHDC4 (ENSUMAG00000007989) #29	ENSUMAG00000007995 #30	CA5A (ENSUMAG00000008023) #31	BANP (ENSUMAG00000008131) #32	ENSUMAG00000008144	ZC3H18 (ENSUMAG00000008186) #33	ENSUMAG00000008254 #35	ENSUMAG00000008270 #36
Giant Panda	MODERN SPECIES	3	WFDC1 (ENSAMEG00000006256) #7	ATP2C2 (ENSAMEG00000006155) #8	COTL1 (ENSAMEG00000024628) #10	KLHL36 (ENSAMEG00000018309) #11	USP10 (ENSAMEG00000018303) #12	CRISPLD2 (ENSAMEG00000018298) #13	ZDHHC7 (ENSAMEG00000018295) #14	KIAA0513 (ENSAMEG00000018290) #15	CIBAR2 (ENSAMEG00000018288)	GSE1 (ENSAMEG00000018284) #16	GINS2 (ENSAMEG00000018281) #17	C16orf74 (ENSAMEG00000018280)	EMC8 (ENSAMEG00000018276) #18	ENSAMEG00000018274 #19	IRF8 (ENSAMEG00000024285) #21	FOXF1 (ENSAMEG00000018266) #22	MTHFSD (ENSAMEG00000018265) #23	FOXC2 (ENSAMEG00000026760)	FOXL1 (ENSAMEG00000019188)	ENSAMEG00000018261 #24	FBXO31 (ENSAMEG00000018256) #25	ENSAMEG00000018254 #26	ZCCHC14 (ENSAMEG00000018253) #27	JPH3 (ENSAMEG00000018252) #28	ENSAMEG00000018231 #29	ENSAMEG00000018203 #30	ENSAMEG00000030494 #30	CA5A (ENSAMEG00000018202) #31	BANP (ENSAMEG00000018194) #32	ZNF469 (ENSAMEG00000030238)	ZFPM1 (ENSAMEG00000018149)
Canidae	ANCESTRAL SPECIES	11	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Dog	MODERN SPECIES	33	ATP2C2 (ENSCAFG00845004715) #8	MEAK7 (ENSCAFG00845004695) #9	COTL1 (ENSCAFG00845004688) #10	KLHL36 (ENSCAFG00845004673) #11	USP10 (ENSCAFG00845004628) #12	CRISPLD2 (ENSCAFG00845004605) #13	ZDHHC7 (ENSCAFG00845004590) #14	KIAA0513 (ENSCAFG00845004575) #15	CIBAR2 (ENSCAFG00845004497)	GSE1 (ENSCAFG00845004430) #16	GINS2 (ENSCAFG00845004327) #17	C5H16orf74 (ENSCAFG00845004314)	ENSCAFG00845004296 #18	COX4I1 (ENSCAFG00845004280) #19	IRF8 (ENSCAFG00845004258) #21	FOXF1 (ENSCAFG00845004240) #22	ENSCAFG00845004233 #23	ENSCAFG00845004229 #23	FOXC2 (ENSCAFG00845004221)	FOXL1 (ENSCAFG00845004217)	ENSCAFG00845004168 #25	MAP1LC3B (ENSCAFG00845004027) #26	ZCCHC14 (ENSCAFG00845003938) #27	JPH3 (ENSCAFG00845003896) #28	KLHDC4 (ENSCAFG00845003850) #29	SLC7A5 (ENSCAFG00845003789) #30	CA5A (ENSCAFG00845003758) #31	BANP (ENSCAFG00845003720) #32	ZNF469 (ENSCAFG00845003692)	ZFPM1 (ENSCAFG00845003652)	ZC3H18 (ENSCAFG00845003583) #33
Dingo	MODERN SPECIES	373	ATP2C2 (ENSCAFG00020003435) #8	MEAK7 (ENSCAFG00020003989) #9	COTL1 (ENSCAFG00020003997) #10	KLHL36 (ENSCAFG00020004009) #11	USP10 (ENSCAFG00020004033) #12	CRISPLD2 (ENSCAFG00020004050) #13	ZDHHC7 (ENSCAFG00020004061) #14	KIAA0513 (ENSCAFG00020004099) #15	CIBAR2 (ENSCAFG00020004114)	GSE1 (ENSCAFG00020004155) #16	GINS2 (ENSCAFG00020004171) #17	ENSCAFG00020004197	ENSCAFG00020004199 #18	COX4I1 (ENSCAFG00020004200) #19	IRF8 (ENSCAFG00020004206) #21	FOXF1 (ENSCAFG00020004287) #22	ENSCAFG00020004291 #23	ENSCAFG00020004294 #23	FOXC2 (ENSCAFG00020004304)	FOXL1 (ENSCAFG00020004312)	ENSCAFG00020004338 #24	FBXO31 (ENSCAFG00020004345) #25	ENSCAFG00020004363 ##26	ZCCHC14 (ENSCAFG00020004411) #27	JPH3 (ENSCAFG00020004461) #28	KLHDC4 (ENSCAFG00020004485) #29	SLC7A5 (ENSCAFG00020004501) #30	CA5A (ENSCAFG00020004529) #31	BANP (ENSCAFG00020004582) #32	ZFPM1 (ENSCAFG00020004606)	ZC3H18 (ENSCAFG00020004617) #33
Red fox	MODERN SPECIES	51	ATP2C2 (ENSVVUG00000030286) #8	MEAK7 (ENSVVUG00000030302) #9	COTL1 (ENSVVUG00000030305) #10	KLHL36 (ENSVVUG00000030309) #11	USP10 (ENSVVUG00000030314) #12	CRISPLD2 (ENSVVUG00000030326) #13	ZDHHC7 (ENSVVUG00000030328) #14	KIAA0513 (ENSVVUG00000000141) #15	CIBAR2 (ENSVVUG00000000202)	GSE1 (ENSVVUG00000000307) #16	GINS2 (ENSVVUG00000000445) #17	ENSVVUG00000000460	EMC8 (ENSVVUG00000000490) #18	ENSVVUG00000000506 #19	IRF8 (ENSVVUG00000000647) #21	FOXF1 (ENSVVUG00000000664) #22	ENSVVUG00000000674 #23	ENSVVUG00000000715	FOXL1 (ENSVVUG00000000732)	CUNH16orf95 (ENSVVUG00000000786) #24	FBXO31 (ENSVVUG00000000808) #25	ENSVVUG00000000840 ##26	ZCCHC14 (ENSVVUG00000000929) #27	JPH3 (ENSVVUG00000000956) #28	KLHDC4 (ENSVVUG00000000963) #29	SLC7A5 (ENSVVUG00000001118) #30	CA5A (ENSVVUG00000003089) #31	ENSVVUG00000003099 #32	ZNF469 (ENSVVUG00000003140)	ENSVVUG00000003145	ZC3H18 (ENSVVUG00000003166) #33
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158.l.c.b #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158.l.c.b #26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000001368 #25	ENSGT00940000154158.l.c.b #26	ENSGT01050000246015	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34
leopard	MODERN SPECIES	60	ATP2C2 (ENSPPRG00000005160) #8	MEAK7 (ENSPPRG00000005574) #9	COTL1 (ENSPPRG00000005657) #10	KLHL36 (ENSPPRG00000006076) #11	USP10 (ENSPPRG00000007182) #12	ENSPPRG00000007324 #13	ZDHHC7 (ENSPPRG00000008164) #14	KIAA0513 (ENSPPRG00000009019) #15	CIBAR2 (ENSPPRG00000009612)	GSE1 (ENSPPRG00000017749) #16	GINS2 (ENSPPRG00000022059) #17	ENSPPRG00000024649	EMC8 (ENSPPRG00000024408) #18	ENSPPRG00000024103 #19	IRF8 (ENSPPRG00000023576) #21	FOXF1 (ENSPPRG00000023418) #22	MTHFSD (ENSPPRG00000023220) #23	FOXC2 (ENSPPRG00000023064)	FBXO31 (ENSPPRG00000022691) #25	ENSPPRG00000000496 #26	ENSPPRG00000000504	ZCCHC14 (ENSPPRG00000000792) #27	JPH3 (ENSPPRG00000001118) #28	KLHDC4 (ENSPPRG00000002320) #29	ENSPPRG00000002384	SLC7A5 (ENSPPRG00000002690) #30	CA5A (ENSPPRG00000002749) #31	BANP (ENSPPRG00000004221) #32	ENSPPRG00000005543	ENSPPRG00000007243	IL17C (ENSPPRG00000007706) #34
lion	MODERN SPECIES	15	ENSPLOG00000006012 #8	MEAK7 (ENSPLOG00000006058) #9	COTL1 (ENSPLOG00000006162) #10	KLHL36 (ENSPLOG00000006204) #11	USP10 (ENSPLOG00000006249) #12	CRISPLD2 (ENSPLOG00000006321) #13	ZDHHC7 (ENSPLOG00000006447) #14	KIAA0513 (ENSPLOG00000006501) #15	CIBAR2 (ENSPLOG00000006577)	GSE1 (ENSPLOG00000006716) #16	GINS2 (ENSPLOG00000006957) #17	C16orf74 (ENSPLOG00000006979)	EMC8 (ENSPLOG00000007073) #18	COX4I1 (ENSPLOG00000007101) #19	IRF8 (ENSPLOG00000007128) #21	FOXF1 (ENSPLOG00000007159) #22	MTHFSD (ENSPLOG00000007178) #23	ENSPLOG00000007206 #23	FOXC2 (ENSPLOG00000007240)	FOXL1 (ENSPLOG00000007253)	FBXO31 (ENSPLOG00000007378) #25	ENSPLOG00000007428 #26	ENSPLOG00000007453	ENSPLOG00000007469 #27	ENSPLOG00000007514 #27	JPH3 (ENSPLOG00000007526) #28	KLHDC4 (ENSPLOG00000007563) #29	SLC7A5 (ENSPLOG00000007618) #30	CA5A (ENSPLOG00000007724) #31	BANP (ENSPLOG00000007791) #32	ZC3H18 (ENSPLOG00000008137) #33
Tiger	MODERN SPECIES	176	ENSPTIG00000019244	ATP2C2 (ENSPTIG00000016600) #8	MEAK7 (ENSPTIG00000016108) #9	COTL1 (ENSPTIG00000015903) #10	KLHL36 (ENSPTIG00000014929) #11	USP10 (ENSPTIG00000012919) #12	CRISPLD2 (ENSPTIG00000005240) #13	ZDHHC7 (ENSPTIG00000002121) #14	KIAA0513 (ENSPTIG00000020445) #15	GINS2 (ENSPTIG00000020197) #17	ENSPTIG00000020016	ENSPTIG00000019814	EMC8 (ENSPTIG00000019682) #18	COX4I1 (ENSPTIG00000018967) #19	ENSPTIG00000018645 #21	FOXF1 (ENSPTIG00000018017) #22	ENSPTIG00000017567 #23	FBXO31 (ENSPTIG00000017229) #25	ENSPTIG00000016952 #26	ENSPTIG00000016365 #28	KLHDC4 (ENSPTIG00000013895) #29	ENSPTIG00000013335 #30	CA5A (ENSPTIG00000012324) #31	BANP (ENSPTIG00000009960) #32	ZC3H18 (ENSPTIG00000007787) #33	ENSPTIG00000000414 #35	ENSPTIG00000021401 #36	ENSPTIG00000020476 #37	ENSPTIG00000018403	APRT (ENSPTIG00000018170)	GALNS (ENSPTIG00000016468)
Cat	MODERN SPECIES	246	MEAK7 (ENSFCAG00000011749) #9	ENSFCAG00000043033 #10	KLHL36 (ENSFCAG00000010830) #11	USP10 (ENSFCAG00000010831) #12	CRISPLD2 (ENSFCAG00000010832) #13	ENSFCAG00000050674	ZDHHC7 (ENSFCAG00000021957) #14	KIAA0513 (ENSFCAG00000006136) #15	CIBAR2 (ENSFCAG00000030210)	GSE1 (ENSFCAG00000007608) #16	GINS2 (ENSFCAG00000007610) #17	C16orf74 (ENSFCAG00000037070)	EMC8 (ENSFCAG00000045006) #18	COX4I1 (ENSFCAG00000045400) #19	IRF8 (ENSFCAG00000046322) #21	FOXF1 (ENSFCAG00000030557) #22	MTHFSD (ENSFCAG00000023656) #23	FOXC2 (ENSFCAG00000045920)	FOXL1 (ENSFCAG00000032503)	ENSFCAG00000030080 #24	FBXO31 (ENSFCAG00000045924) #25	ENSFCAG00000036874 #26	ZCCHC14 (ENSFCAG00000031468) #27	ENSFCAG00000039722	JPH3 (ENSFCAG00000008361) #28	KLHDC4 (ENSFCAG00000030498) #29	SLC7A5 (ENSFCAG00000012040) #30	CA5A (ENSFCAG00000041876) #31	BANP (ENSFCAG00000012044) #32	ZNF469 (ENSFCAG00000027577)	ZFPM1 (ENSFCAG00000041829)
Atlantogenata	ANCESTRAL SPECIES	52	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00390000001368 #25	ENSGT00940000154158.k.a ##26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34	ENSGT00390000002290 #35
Afrotheria	ANCESTRAL SPECIES	50	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00390000001368 #25	ENSGT00940000154158.l #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT00730000111190 #33	ENSGT00940000161887 #34	ENSGT00390000002290 #35
Afrotheria_a	ANCESTRAL SPECIES	94	ENSGT00940000160275 #8	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619
Elephant	MODERN SPECIES	458	ATP2C2 (ENSLAFG00000017225) #8	MEAK7 (ENSLAFG00000030108) #9	COTL1 (ENSLAFG00000032427) #10	KLHL36 (ENSLAFG00000014020) #11	USP10 (ENSLAFG00000014025) #12	CRISPLD2 (ENSLAFG00000002052) #13	ZDHHC7 (ENSLAFG00000003220) #14	KIAA0513 (ENSLAFG00000018684) #15	CIBAR2 (ENSLAFG00000018688)	GSE1 (ENSLAFG00000011011) #16	GINS2 (ENSLAFG00000011019) #17	C16orf74 (ENSLAFG00000011435)	EMC8 (ENSLAFG00000011023) #18	COX4I1 (ENSLAFG00000014002) #19	IRF8 (ENSLAFG00000010973) #21	FOXF1 (ENSLAFG00000002036) #22	MTHFSD (ENSLAFG00000002037) #23	FOXC2 (ENSLAFG00000012537)	ENSLAFG00000013834	FBXO31 (ENSLAFG00000013841) #25	ENSLAFG00000023364 #26	ZCCHC14 (ENSLAFG00000013845) #27	JPH3 (ENSLAFG00000013042) #28	KLHDC4 (ENSLAFG00000003675) #29	SLC7A5 (ENSLAFG00000009143) #30	CA5A (ENSLAFG00000008323) #31	BANP (ENSLAFG00000005122) #32	ENSLAFG00000030575	ZFPM1 (ENSLAFG00000013561)	ZC3H18 (ENSLAFG00000015674) #33	CYBA (ENSLAFG00000005109) #35
Hyrax	MODERN SPECIES	10335																FOXF1 (ENSPCAG00000004953) #22	MTHFSD (ENSPCAG00000004896) #23	FOXL1 (ENSPCAG00000004888)
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000165027	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158 #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000165027	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158 #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000165027	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158 #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT00940000158087 #9	ENSGT00390000012498 #10	ENSGT00940000157543 #11	ENSGT00550000074994 #12	ENSGT00940000157410 #13	ENSGT00940000165027	ENSGT00940000156519 #14	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000015933	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00390000003910 #24	ENSGT00390000001368 #25	ENSGT00940000154158 #26	ENSGT00520000055637.A.b #27	ENSGT00940000158707.a.b #28	ENSGT00390000003374 #29	ENSGT00940000155581.C #30	ENSGT00940000162066 #31	ENSGT00390000011116 #32	ENSGT00530000065415	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a
Common wonbat	MODERN SPECIES	312	ENSVURG00010021056 #9	COTL1 (ENSVURG00010021049) #10	KLHL36 (ENSVURG00010021044) #11	USP10 (ENSVURG00010021040) #12	CRISPLD2 (ENSVURG00010021037) #13	ENSVURG00010021033	ZDHHC7 (ENSVURG00010021031) #14	KIAA0513 (ENSVURG00010021027) #15	ENSVURG00010021024	GSE1 (ENSVURG00010020983) #16	GINS2 (ENSVURG00010020977) #17	C16orf74 (ENSVURG00010020974)	ENSVURG00010020971 #18	COX4I1 (ENSVURG00010020967) #19	IRF8 (ENSVURG00010020961) #21	FOXF1 (ENSVURG00010020956) #22	MTHFSD (ENSVURG00010020952) #23	FOXC2 (ENSVURG00010020950)	FOXL1 (ENSVURG00010020948)	FBXO31 (ENSVURG00010020930) #25	ENSVURG00010020928 #26	ZCCHC14 (ENSVURG00010020925) #27	JPH3 (ENSVURG00010020916) #28	KLHDC4 (ENSVURG00010020910) #29	SLC7A5 (ENSVURG00010020901) #30	CA5A (ENSVURG00010020895) #31	BANP (ENSVURG00010020886) #32	ENSVURG00010020878	ZFPM1 (ENSVURG00010020876)	ENSVURG00010020863	ZC3H18 (ENSVURG00010020855) #33
koala	MODERN SPECIES	34	MEAK7 (ENSPCIG00000013540) #9	COTL1 (ENSPCIG00000013538) #10	KLHL36 (ENSPCIG00000013535) #11	USP10 (ENSPCIG00000013527) #12	CRISPLD2 (ENSPCIG00000013522) #13	ENSPCIG00000013511	ZDHHC7 (ENSPCIG00000013509) #14	CIBAR2 (ENSPCIG00000013505)	KIAA0513 (ENSPCIG00000013502) #15	GSE1 (ENSPCIG00000004092) #16	GINS2 (ENSPCIG00000035341) #17	C16orf74 (ENSPCIG00000033796)	EMC8 (ENSPCIG00000004725) #18	COX4I1 (ENSPCIG00000004733) #19	IRF8 (ENSPCIG00000004752) #21	FOXF1 (ENSPCIG00000004771) #22	MTHFSD (ENSPCIG00000004783) #23	FOXC2 (ENSPCIG00000004805)	FOXL1 (ENSPCIG00000004810)	ENSPCIG00000031752	ENSPCIG00000009863 #24	FBXO31 (ENSPCIG00000009870) #25	ENSPCIG00000009873 #26	ZCCHC14 (ENSPCIG00000009877) #27	JPH3 (ENSPCIG00000007544) #28	KLHDC4 (ENSPCIG00000007537) #29	SLC7A5 (ENSPCIG00000007532) #30	CA5A (ENSPCIG00000007525) #31	BANP (ENSPCIG00000007514) #32	ENSPCIG00000008173	ENSPCIG00000007505
Wallaby	MODERN SPECIES	11733																ENSMEUG00000014695 #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000001945 #9	COTL1 (ENSSHAG00000023270) #10	KLHL36 (ENSSHAG00000005024) #11	USP10 (ENSSHAG00000006863) #12	CRISPLD2 (ENSSHAG00000022452) #13	ENSSHAG00000009578	ZDHHC7 (ENSSHAG00000010122) #14	KIAA0513 (ENSSHAG00000010630) #15	CIBAR2 (ENSSHAG00000011068)	GSE1 (ENSSHAG00000014934) #16	GINS2 (ENSSHAG00000020567) #17	EMC8 (ENSSHAG00000032043) #18	COX4I1 (ENSSHAG00000025027) #19	IRF8 (ENSSHAG00000023649) #21	ENSSHAG00000027984	FOXF1 (ENSSHAG00000012906) #22	MTHFSD (ENSSHAG00000013081) #23	FOXC2 (ENSSHAG00000028102)	ENSSHAG00000016780 #24	FBXO31 (ENSSHAG00000016884) #25	ENSSHAG00000026848 #26	ZCCHC14 (ENSSHAG00000017090) #27	JPH3 (ENSSHAG00000017401) #28	KLHDC4 (ENSSHAG00000017683) #29	SLC7A5 (ENSSHAG00000004336) #30	CA5A (ENSSHAG00000002247) #31	BANP (ENSSHAG00000002473) #32	ENSSHAG00000001804	ENSSHAG00000003741 #33	ENSSHAG00000005664 #34	CYBA (ENSSHAG00000005777) #35
Opossum	MODERN SPECIES		KLHL36 (ENSMODG00000004755) #11	ENSMODG00000004726 #12	ENSMODG00000045210	CRISPLD2 (ENSMODG00000004706) #13	ENSMODG00000041238	ENSMODG00000004646 #14	KIAA0513 (ENSMODG00000004641) #15	CIBAR2 (ENSMODG00000004634)	GSE1 (ENSMODG00000004621) #16	GINS2 (ENSMODG00000004604) #17	C16orf74 (ENSMODG00000004599)	ENSMODG00000004596 #18	COX4I1 (ENSMODG00000004591) #19	ENSMODG00000044341 #21	ENSMODG00000004572 #21	FOXF1 (ENSMODG00000004542) #22	MTHFSD (ENSMODG00000004537) #23	ENSMODG00000038610	ENSMODG00000045409 #24	FBXO31 (ENSMODG00000004509) #25	ZCCHC14 (ENSMODG00000004488) #27	ENSMODG00000004493 #26	ENSMODG00000047011 #27	JPH3 (ENSMODG00000004438) #28	KLHDC4 (ENSMODG00000004427) #29	SLC7A5 (ENSMODG00000004407) #30	CA5A (ENSMODG00000004374) #31	BANP (ENSMODG00000004350) #32	ZC3H18 (ENSMODG00000004251) #33	ENSMODG00000004230 #34	CYBA (ENSMODG00000004220) #35
Platypus	MODERN SPECIES	2	COTL1 (ENSOANG00000011343) #10	KLHL36 (ENSOANG00000039074) #11	USP10 (ENSOANG00000011345) #12	CRISPLD2 (ENSOANG00000011346) #13	ENSOANG00000011349	ZDHHC7 (ENSOANG00000047960) #14	KIAA0513 (ENSOANG00000011353) #15	CIBAR2 (ENSOANG00000011354)	GSE1 (ENSOANG00000011355) #16	GINS2 (ENSOANG00000011357) #17	C16orf74 (ENSOANG00000050723)	EMC8 (ENSOANG00000044433) #18	COX4I1 (ENSOANG00000003744) #19	ENSOANG00000003742	IRF8 (ENSOANG00000003741) #21	FOXF1 (ENSOANG00000007633) #22	MTHFSD (ENSOANG00000003740) #23	ENSOANG00000037236	FOXC2 (ENSOANG00000049108)	ENSOANG00000028903	FBXO31 (ENSOANG00000003739) #25	ENSOANG00000040694 #26	ZCCHC14 (ENSOANG00000003350) #27	JPH3 (ENSOANG00000048414) #28	KLHDC4 (ENSOANG00000003737) #29	ENSOANG00000003735 #30	CA5A (ENSOANG00000046265) #31	BANP (ENSOANG00000003732) #32	ENSOANG00000048644	ZFPM1 (ENSOANG00000040393)	ENSOANG00000003211
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01090000261337	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000172426	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01090000261337	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000172426	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00940000175810	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000172426	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368.d #25	ENSGT00390000009535 #15	ENSGT00940000157596.i.b	ENSGT00390000010285.d.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.g	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293.od	ENSGT00390000005410
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368.c #25	ENSGT00390000006922.r.a	ENSGT00390000009535 #15	ENSGT00940000157596.i.b	ENSGT00390000010285.d.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.g	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293.od	ENSGT00390000005410
Goode s thornscrub tortoise	MODERN SPECIES	3	KLHDC4 (ENSGEVG00005004795) #29	JPH3 (ENSGEVG00005004759) #28	ZCCHC14 (ENSGEVG00005004723) #27	ENSGEVG00005004695 #26	FBXO31 (ENSGEVG00005004604) #25	ENSGEVG00005004468	KIAA0513 (ENSGEVG00005004439) #15	CIBAR2 (ENSGEVG00005004370)	GSE1 (ENSGEVG00005004284) #16	GINS2 (ENSGEVG00005004238) #17	ENSGEVG00005004217	EMC8 (ENSGEVG00005017794) #18	COX4I1 (ENSGEVG00005017785) #19	ENSGEVG00005017754	IRF8 (ENSGEVG00005017739) #21	FOXF1 (ENSGEVG00005017719) #22	MTHFSD (ENSGEVG00005017702) #23	FOXC2 (ENSGEVG00005017690)	ENSGEVG00005017664	ZDHHC7 (ENSGEVG00005017648) #14	ENSGEVG00005017602	CRISPLD2 (ENSGEVG00005017574) #13	USP10 (ENSGEVG00005017534) #12	KLHL36 (ENSGEVG00005017511) #11	COTL1 (ENSGEVG00005017499) #10	MEAK7 (ENSGEVG00005017475) #9	ATP2C2 (ENSGEVG00005017125) #8	WFDC1 (ENSGEVG00005017047) #7	KCNG4 (ENSGEVG00005017003)	HSBP1 (ENSGEVG00005016989)	MLYCD (ENSGEVG00005016971)
Abingdon island giant tortoise	MODERN SPECIES	1776	ZCCHC14 (ENSCABG00000004814) #27	ENSCABG00000004815 #26	FBXO31 (ENSCABG00000004818) #25	ENSCABG00000004820	KIAA0513 (ENSCABG00000004824) #15	ENSCABG00000004833	ENSCABG00000004834	ENSCABG00000004837	GSE1 (ENSCABG00000004846) #16	GINS2 (ENSCABG00000004856) #17	ENSCABG00000004860	EMC8 (ENSCABG00000004865) #18	COX4I1 (ENSCABG00000004868) #19	ENSCABG00000004871	IRF8 (ENSCABG00000004872) #21	FOXF1 (ENSCABG00000004881) #22	MTHFSD (ENSCABG00000004883) #23	ENSCABG00000004888	ZDHHC7 (ENSCABG00000004902) #14	ENSCABG00000005129	CRISPLD2 (ENSCABG00000005135) #13	USP10 (ENSCABG00000005160) #12
Emydidae	ANCESTRAL SPECIES	47	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158.o #26	ENSGT00390000001368.d #25	ENSGT00390000009535 #15	ENSGT00940000157596.i.b	ENSGT00390000010285.d.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.g	ENSGT00940000156519.e #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299.i #7	ENSGT00940000156938	ENSGT00390000006293.pd	ENSGT00390000005410
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2267	ENSTMTG00000013437 #29	ENSTMTG00000013415 #28	ENSTMTG00000013381 #27	ENSTMTG00000013374 #26	ENSTMTG00000013321 #25	ENSTMTG00000013295 #15	ENSTMTG00000013285	ENSTMTG00000013261	ENSTMTG00000013206 #16	ENSTMTG00000013179 #17	ENSTMTG00000013164	ENSTMTG00000013151 #18	ENSTMTG00000013139 #19	ENSTMTG00000013124	ENSTMTG00000013106 #21	ENSTMTG00000013098 #22	ENSTMTG00000012923 #23	ENSTMTG00000012881	ENSTMTG00000012872	ENSTMTG00000012860 #14	ENSTMTG00000012828	ENSTMTG00000012808 #13	ENSTMTG00000012762 #12	ENSTMTG00000012748 #11	ENSTMTG00000012740 #10	ENSTMTG00000012723 #9	ENSTMTG00000012651 #8	ENSTMTG00000012630 #7	ENSTMTG00000012560	ENSTMTG00000012535	ENSTMTG00000012475
Three-toed box turtle	MODERN SPECIES	2272	ENSTMTG00000010262 #29	ENSTMTG00000010234 #28	ENSTMTG00000010222 #27	ENSTMTG00000010182 #27	ENSTMTG00000010169 #26	ENSTMTG00000010150 #25	ENSTMTG00000010126 #15	ENSTMTG00000010097	ENSTMTG00000010059 #16	ENSTMTG00000010038 #17	ENSTMTG00000010033	ENSTMTG00000010018 #18	ENSTMTG00000010002 #19	ENSTMTG00000009986	ENSTMTG00000009955 #21	ENSTMTG00000009940 #22	ENSTMTG00000009927 #23	ENSTMTG00000009862	ENSTMTG00000014764	ENSTMTG00000014752	ENSTMTG00000014741 #14	ENSTMTG00000014718	ENSTMTG00000014697 #13	ENSTMTG00000014660 #12	ENSTMTG00000014638 #11	ENSTMTG00000014623 #10	ENSTMTG00000014607 #9	ENSTMTG00000014538 #8	ENSTMTG00000014519 #7	ENSTMTG00000014476	ENSTMTG00000014461
painted turtle	MODERN SPECIES	708	JPH3 (ENSCPBG00000023516) #28	ZCCHC14 (ENSCPBG00000023517) #27	ENSCPBG00000023524 #26	FBXO31 (ENSCPBG00000023527) #25	KIAA0513 (ENSCPBG00000023532) #15	ENSCPBG00000023538	ENSCPBG00000023540	CIBAR2 (ENSCPBG00000023544)	GSE1 (ENSCPBG00000023555) #16	GINS2 (ENSCPBG00000023566) #17	ENSCPBG00000023568	EMC8 (ENSCPBG00000023570) #18	COX4I1 (ENSCPBG00000023571) #19	ENSCPBG00000023573	IRF8 (ENSCPBG00000023576) #21	FOXF1 (ENSCPBG00000023578) #22	MTHFSD (ENSCPBG00000023581) #23	FOXC2 (ENSCPBG00000023585)	ENSCPBG00000023588	ENSCPBG00000023591	ZDHHC7 (ENSCPBG00000023597) #14	ENSCPBG00000023600	CRISPLD2 (ENSCPBG00000023606) #13	USP10 (ENSCPBG00000023617) #12	KLHL36 (ENSCPBG00000023624) #11	COTL1 (ENSCPBG00000023626) #10	MEAK7 (ENSCPBG00000023628) #9	ATP2C2 (ENSCPBG00000023713) #8	WFDC1 (ENSCPBG00000023882) #7	KCNG4 (ENSCPBG00000023886)	HSBP1 (ENSCPBG00000023888)
Archosauria	ANCESTRAL SPECIES	14	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01090000261337	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00940000166270
Australian saltwater crocodile	MODERN SPECIES	35	SLC7A5 (ENSCPRG00005006827) #30	KLHDC4 (ENSCPRG00005006819) #29	JPH3 (ENSCPRG00005006814) #28	ZCCHC14 (ENSCPRG00005006802) #27	ENSCPRG00005006789 #26	FBXO31 (ENSCPRG00005006779) #25	KIAA0513 (ENSCPRG00005006748) #15	CIBAR2 (ENSCPRG00005006729)	ENSCPRG00005006724	GSE1 (ENSCPRG00005006721) #16	GINS2 (ENSCPRG00005006713) #17	ENSCPRG00005006710	EMC8 (ENSCPRG00005006704) #18	COX4I1 (ENSCPRG00005006699) #19	IRF8 (ENSCPRG00005006696) #21	FOXF1 (ENSCPRG00005006679) #22	MTHFSD (ENSCPRG00005006673) #23	FOXC2 (ENSCPRG00005006670)	FOXL1 (ENSCPRG00005006666)	ZDHHC7 (ENSCPRG00005006621) #14	ENSCPRG00005006611	CRISPLD2 (ENSCPRG00005006599) #13	USP10 (ENSCPRG00005006388) #12	KLHL36 (ENSCPRG00005006359) #11	ENSCPRG00005006356 #10	MEAK7 (ENSCPRG00005006352) #9	ATP2C2 (ENSCPRG00005006346) #8	WFDC1 (ENSCPRG00005006344) #7	KCNG4 (ENSCPRG00005006329)	HSBP1 (ENSCPRG00005006321)	ENSCPRG00005006320
Aves	ANCESTRAL SPECIES	22	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01090000261337	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Neognathae	ANCESTRAL SPECIES	13	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01090000261337	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Anatidae	ANCESTRAL SPECIES	17	ENSGT00390000011116 #32	ENSGT00940000156978	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535.d #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Duck	MODERN SPECIES	3	CA5B (ENSAPLG00000007542)	SLC7A5 (ENSAPLG00000029758) #30	KLHDC4 (ENSAPLG00000006655) #29	JPH3 (ENSAPLG00000006426) #28	ZCCHC14 (ENSAPLG00000005595) #27	ENSAPLG00000020659 #26	ENSAPLG00000005355 #25	ENSAPLG00000005230 #15	ENSAPLG00000026309 #25	GSE1 (ENSAPLG00000020408) #16	GINS2 (ENSAPLG00000024989) #17	EMC8 (ENSAPLG00000026906) #18	COX4I1 (ENSAPLG00000010205) #19	ENSAPLG00000021849	ENSAPLG00000021706 #21	FOXF1 (ENSAPLG00000019903) #22	MTHFSD (ENSAPLG00000011022) #23	FOXL1 (ENSAPLG00000000883)	ZDHHC7 (ENSAPLG00000011224) #14	ENSAPLG00000011331	CRISPLD2 (ENSAPLG00000011940) #13	USP10 (ENSAPLG00000012121) #12	KLHL36 (ENSAPLG00000012341) #11	COTL1 (ENSAPLG00000016644) #10	MEAK7 (ENSAPLG00000012412) #9	ATP2C2 (ENSAPLG00000012448) #8	KCNG4 (ENSAPLG00000013390)	WFDC1 (ENSAPLG00000013371) #7	HSBP1 (ENSAPLG00000028761)	MLYCD (ENSAPLG00000021334)	CDH13 (ENSAPLG00000002525)
Pink-footed goose	MODERN SPECIES	331												GINS2 (ENSABRG00000000162) #17	EMC8 (ENSABRG00000000150) #18	COX4 (ENSABRG00000018267) #19	IRF8 (ENSABRG00000018259) #21	FOXF1 (ENSABRG00000018251) #22	MTHFSD (ENSABRG00000018223) #23	FOXC2 (ENSABRG00000018220)	FOXL1 (ENSABRG00000018219)
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b.e #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000156978	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b.e #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Chicken	MODERN SPECIES	2	SLC7A5 (ENSGALG00010010461) #30	KLHDC4 (ENSGALG00010009235) #29	ENSGALG00010009807	JPH3 (ENSGALG00010009126) #28	ZCCHC14 (ENSGALG00010006961) #27	MAP1LC3B (ENSGALG00010006953) #26	FBXO31 (ENSGALG00010006939) #25	KIAA0513 (ENSGALG00010008592) #15	GSE1 (ENSGALG00010006877) #16	GINS2 (ENSGALG00010006840) #17	ENSGALG00010006824	EMC8 (ENSGALG00010006819) #18	COX4I1 (ENSGALG00010006803) #19	ENSGALG00010006767	IRF8 (ENSGALG00010006715) #21	FOXF1 (ENSGALG00010007223) #22	MTHFSD (ENSGALG00010007214) #23	FOXC2 (ENSGALG00010007175)	FOXL1 (ENSGALG00010007155)	ZDHHC7 (ENSGALG00010009030) #14	HNF4beta (ENSGALG00010009021)	CRISPLD2 (ENSGALG00010006681) #13	USP10 (ENSGALG00010006558) #12	KLHL36 (ENSGALG00010007650) #11	COTL1 (ENSGALG00010007643) #10	TLDC1 (ENSGALG00010007610) #9	ATP2C2 (ENSGALG00010007595) #8	WFDC1 (ENSGALG00010007577) #7	KCNG4 (ENSGALG00010007585)	HSBP1 (ENSGALG00010007548)	MLYCD (ENSGALG00010007544)
Turkey	MODERN SPECIES	4															ENSMGAG00000007290 #23	ENSMGAG00000017424 #22	ENSMGAG00000007344 #21	ENSMGAG00000007456 #19	ENSMGAG00000007444	ENSMGAG00000021325	ENSMGAG00000007482 #18	ENSMGAG00000007506 #17	ENSMGAG00000007516 #16	ENSMGAG00000007360 #15	FBXO31 (ENSMGAG00000007386) #25	ENSMGAG00000007316 #27	ENSMGAG00000017662 #26	ENSMGAG00000018706 #27	ENSMGAG00000022634 #28	ENSMGAG00000022589 #28	ENSMGAG00000007417 #28
Japanese quail	MODERN SPECIES	2	SLC7A5 (ENSCJPG00005014759) #30	KLHDC4 (ENSCJPG00005014757) #29	JPH3 (ENSCJPG00005014756) #28	ZCCHC14 (ENSCJPG00005014755) #27	ENSCJPG00005014754 #26	FBXO31 (ENSCJPG00005014753) #25	KIAA0513 (ENSCJPG00005014752) #15	GSE1 (ENSCJPG00005014751) #16	GINS2 (ENSCJPG00005014750) #17	ENSCJPG00005014749	EMC8 (ENSCJPG00005014748) #18	COX4I1 (ENSCJPG00005014747) #19	ENSCJPG00005014746	ENSCJPG00005014745	IRF8 (ENSCJPG00005014744) #21	FOXF1 (ENSCJPG00005014740) #22	MTHFSD (ENSCJPG00005014739) #23	FOXC2 (ENSCJPG00005014738)	FOXL1 (ENSCJPG00005014737)	ZDHHC7 (ENSCJPG00005014733) #14	ENSCJPG00005014732	CRISPLD2 (ENSCJPG00005014728) #13	USP10 (ENSCJPG00005014727) #12	KLHL36 (ENSCJPG00005014726) #11	COTL1 (ENSCJPG00005014725) #10	MEAK7 (ENSCJPG00005014723) #9	ATP2C2 (ENSCJPG00005014722) #8	WFDC1 (ENSCJPG00005014721) #7	KCNG4 (ENSCJPG00005014720)	HSBP1 (ENSCJPG00005014719)	MLYCD (ENSCJPG00005014717)
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000156978	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.f	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00940000156978	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.f	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	19	ENSSHBG00005011539 #30	KLHDC4 (ENSSHBG00005011563) #29	ENSSHBG00005011574 #28	ENSSHBG00005011593 #27	ENSSHBG00005011633 #26	ENSSHBG00005011653 #25	KIAA0513 (ENSSHBG00005011719) #15	ENSSHBG00005011741 #16	ENSSHBG00005011767	ENSSHBG00005011780 #17	ENSSHBG00005011793	ENSSHBG00005011805 #18	ENSSHBG00005011820 #19	ENSSHBG00005011829	ENSSHBG00005011846 #21	ENSSHBG00005011858 #22	MTHFSD (ENSSHBG00005011871) #23	FOXC2 (ENSSHBG00005011880)	ENSSHBG00005011890	ENSSHBG00005011902 #14	ENSSHBG00005011917	CRISPLD2 (ENSSHBG00005011931) #13	ENSSHBG00005011948 #12	ENSSHBG00005011959 #11	COTL1 (ENSSHBG00005011964) #10	MEAK7 (ENSSHBG00005011979) #9	ATP2C2 (ENSSHBG00005012019) #8	WFDC1 (ENSSHBG00005012110) #7	KCNG4 (ENSSHBG00005012125)	HSBP1 (ENSSHBG00005012133)	MLYCD (ENSSHBG00005012147)
Kakapo	MODERN SPECIES	4	ENSSHBG00005000111 #32	ENSSHBG00005000093	ENSSHBG00005000085 #30	ENSSHBG00005000078	ENSSHBG00005000070 #28	ENSSHBG00005000061 #27	ENSSHBG00005000056 #26	ENSSHBG00005000041 #25	ENSSHBG00005000008 #16	ENSSHBG00005000404 #17	ENSSHBG00005000403	ENSSHBG00005000401 #18	ENSSHBG00005000400 #19	ENSSHBG00005000397	ENSSHBG00005000395 #21	ENSSHBG00005000393 #22	ENSSHBG00005000392	ENSSHBG00005000390	ENSSHBG00005000389	ENSSHBG00005000387	ENSSHBG00005000386 #14	ENSSHBG00005000384	ENSSHBG00005000380 #12	ENSSHBG00005000377 #11	ENSSHBG00005000375	ENSSHBG00005000373	ENSSHBG00005000372	ENSSHBG00005000370	ENSSHBG00005000369	ENSSHBG00005000360	ENSSHBG00005000347
Golden eagle	MODERN SPECIES	25	CA5B (ENSACCG00020003048)	SLC7A5 (ENSACCG00020003066) #30	KLHDC4 (ENSACCG00020003087) #29	JPH3 (ENSACCG00020003107) #28	ZCCHC14 (ENSACCG00020003119) #27	ENSACCG00020003138 #26	FBXO31 (ENSACCG00020003158) #25	KIAA0513 (ENSACCG00020003188) #15	GSE1 (ENSACCG00020003227) #16	GINS2 (ENSACCG00020003285) #17	ENSACCG00020003299	EMC8 (ENSACCG00020003310) #18	COX4I1 (ENSACCG00020003327) #19	ENSACCG00020003346	IRF8 (ENSACCG00020003360) #21	FOXF1 (ENSACCG00020003377) #22	MTHFSD (ENSACCG00020003395) #23	FOXC2 (ENSACCG00020003405)	FOXL1 (ENSACCG00020003416)	ZDHHC7 (ENSACCG00020003427) #14	ENSACCG00020003436	CRISPLD2 (ENSACCG00020003457) #13	USP10 (ENSACCG00020003492) #12	KLHL36 (ENSACCG00020003544) #11	COTL1 (ENSACCG00020003571) #10	MEAK7 (ENSACCG00020003585) #9	ATP2C2 (ENSACCG00020003621) #8	WFDC1 (ENSACCG00020003652) #7	KCNG4 (ENSACCG00020003669)	HSBP1 (ENSACCG00020003682)	MLYCD (ENSACCG00020003692)
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00940000156978	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.e	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Great tit	MODERN SPECIES	2	SLC7A5 (ENSPMJG00000013896) #30	KLHDC4 (ENSPMJG00000013898) #29	JPH3 (ENSPMJG00000013899) #28	ZCCHC14 (ENSPMJG00000013900) #27	ENSPMJG00000013901 #26	FBXO31 (ENSPMJG00000013902) #25	KIAA0513 (ENSPMJG00000013903) #15	GSE1 (ENSPMJG00000013905) #16	ENSPMJG00000013913	GINS2 (ENSPMJG00000013914) #17	ENSPMJG00000013915	EMC8 (ENSPMJG00000013916) #18	COX4I1 (ENSPMJG00000013917) #19	ENSPMJG00000013918	IRF8 (ENSPMJG00000013919) #21	FOXF1 (ENSPMJG00000013923) #22	MTHFSD (ENSPMJG00000013926) #23	FOXC2 (ENSPMJG00000013927)	FOXL1 (ENSPMJG00000013928)	ZDHHC7 (ENSPMJG00000013934) #14	ENSPMJG00000013936	CRISPLD2 (ENSPMJG00000013940) #13	USP10 (ENSPMJG00000013945) #12	KLHL36 (ENSPMJG00000013947) #11	COTL1 (ENSPMJG00000013949) #10	MEAK7 (ENSPMJG00000013951) #9	ATP2C2 (ENSPMJG00000013955) #8	WFDC1 (ENSPMJG00000013956) #7	ENSPMJG00000013957	KCNG4 (ENSPMJG00000013958)	HSBP1 (ENSPMJG00000013962)
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00940000156978	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.e	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Flycatcher	MODERN SPECIES	2	KLHDC4 (ENSFALG00000006562) #29	JPH3 (ENSFALG00000006566) #28	ENSFALG00000024690 #27	ENSFALG00000006573 #27	ENSFALG00000024799 #26	FBXO31 (ENSFALG00000006588) #25	KIAA0513 (ENSFALG00000006602) #15	GSE1 (ENSFALG00000006615) #16	GINS2 (ENSFALG00000023337) #17	ENSFALG00000027907	EMC8 (ENSFALG00000006625) #18	COX4I1 (ENSFALG00000006638) #19	ENSFALG00000023982	IRF8 (ENSFALG00000006647) #21	ENSFALG00000026396	FOXF1 (ENSFALG00000006654) #22	MTHFSD (ENSFALG00000027656) #23	FOXC2 (ENSFALG00000006663)	ZDHHC7 (ENSFALG00000023069) #14	ENSFALG00000006678	CRISPLD2 (ENSFALG00000006687) #13	USP10 (ENSFALG00000006689) #12	KLHL36 (ENSFALG00000006693) #11	COTL1 (ENSFALG00000025685) #10	MEAK7 (ENSFALG00000006703) #9	ATP2C2 (ENSFALG00000006709) #8	ENSFALG00000006716	KCNG4 (ENSFALG00000006721)	ENSFALG00000026189	ENSFALG00000006725	CDH13 (ENSFALG00000006727)
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00940000156978	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.e	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00940000156978	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01040000241165	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251.e	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Zebra finch	MODERN SPECIES	2	ENSTGUG00000029627	BANP (ENSTGUG00000007690) #32	CA5B (ENSTGUG00000007678)	SLC7A5 (ENSTGUG00000007655) #30	KLHDC4 (ENSTGUG00000007641) #29	JPH3 (ENSTGUG00000007640) #28	ZCCHC14 (ENSTGUG00000007612) #27	ENSTGUG00000029453 #26	FBXO31 (ENSTGUG00000007593) #25	KIAA0513 (ENSTGUG00000007582) #15	GSE1 (ENSTGUG00000007561) #16	EMC8 (ENSTGUG00000004096) #18	ENSTGUG00000004109 #19	ENSTGUG00000004124	IRF8 (ENSTGUG00000004127) #21	FOXF1 (ENSTGUG00000004150) #22	MTHFSD (ENSTGUG00000004154) #23	FOXC2 (ENSTGUG00000004163)	FOXL1 (ENSTGUG00000004166)	ZDHHC7 (ENSTGUG00000004169) #14	ENSTGUG00000004174	CRISPLD2 (ENSTGUG00000004192) #13	USP10 (ENSTGUG00000004217) #12	KLHL36 (ENSTGUG00000004250) #11	COTL1 (ENSTGUG00000027103) #10	ENSTGUG00000019821 #8	ENSTGUG00000004343	ENSTGUG00000004264 #9	ENSTGUG00000021270 #9	ENSTGUG00000004269 #8	WFDC1 (ENSTGUG00000004342) #7
Medium ground finch	MODERN SPECIES	76	CIDEC (ENSGFOG00000004180)	BANP (ENSGFOG00000004170) #32	CA5B (ENSGFOG00000004148)	SLC7A5 (ENSGFOG00000004114) #30	KLHDC4 (ENSGFOG00000004090) #29	JPH3 (ENSGFOG00000004069) #28	ENSGFOG00000004040 #26	FBXO31 (ENSGFOG00000004033) #25	KIAA0513 (ENSGFOG00000004009) #15	GSE1 (ENSGFOG00000003994) #16	GINS2 (ENSGFOG00000003982) #17	EMC8 (ENSGFOG00000003957) #18	COX4I1 (ENSGFOG00000003946) #19	ENSGFOG00000003938	IRF8 (ENSGFOG00000003917) #21	FOXF1 (ENSGFOG00000003904) #22	MTHFSD (ENSGFOG00000003841) #23	FOXC2 (ENSGFOG00000003824)	ZDHHC7 (ENSGFOG00000003808) #14	ENSGFOG00000003771	CRISPLD2 (ENSGFOG00000003727) #13	USP10 (ENSGFOG00000003669) #12	KLHL36 (ENSGFOG00000003654) #11	COTL1 (ENSGFOG00000003644) #10	MEAK7 (ENSGFOG00000003627) #9	ATP2C2 (ENSGFOG00000002906) #8	WFDC1 (ENSGFOG00000002779) #7	KCNG4 (ENSGFOG00000002767)	HSBP1 (ENSGFOG00000002754)	MLYCD (ENSGFOG00000002722)
Lepidosauria	ANCESTRAL SPECIES	29	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010606.`b.a	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01030000235245	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01090000261337	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140.d #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
tuatara	MODERN SPECIES	59	JPH3 (ENSSPUG00000007585) #28	ENSSPUG00000007599 #27	ENSSPUG00000007612 #27	ENSSPUG00000007629 #26	FBXO31 (ENSSPUG00000007642) #25	KIAA0513 (ENSSPUG00000007650) #15	ENSSPUG00000007666	CIBAR2 (ENSSPUG00000007681)	GSE1 (ENSSPUG00000007720) #16	GINS2 (ENSSPUG00000007729) #17	ENSSPUG00000007736	EMC8 (ENSSPUG00000007744) #18	COX4I1 (ENSSPUG00000007755) #19	ENSSPUG00000007761	IRF8 (ENSSPUG00000007805) #21	FOXF1 (ENSSPUG00000007815) #22	MTHFSD (ENSSPUG00000007833) #23	FOXC2 (ENSSPUG00000007907)	ZDHHC7 (ENSSPUG00000007940) #14	ENSSPUG00000007949	CRISPLD2 (ENSSPUG00000007965) #13	USP10 (ENSSPUG00000007982) #12	KLHL36 (ENSSPUG00000008001) #11	COTL1 (ENSSPUG00000008015) #10	MEAK7 (ENSSPUG00000008023) #9	ATP2C2 (ENSSPUG00000008045) #8	WFDC1 (ENSSPUG00000008075) #7	KCNG4 (ENSSPUG00000008081)	HSBP1 (ENSSPUG00000008085)	MLYCD (ENSSPUG00000008100)	ENSSPUG00000008137
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010606.`b.a	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01090000261337	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140.d #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Laterata	ANCESTRAL SPECIES	28	ENSGT00940000155581.C #30	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010606.`b.a	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140.d #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410	ENSGT00940000155218.B
Argentine black and white tegu	MODERN SPECIES	51	ENSSMRG00000006733	ZCCHC14 (ENSSMRG00000006713) #27	ENSSMRG00000006705 #26	FBXO31 (ENSSMRG00000006700) #25	KIAA0513 (ENSSMRG00000006675) #15	CIBAR2 (ENSSMRG00000006662)	GSE1 (ENSSMRG00000006626) #16	GINS2 (ENSSMRG00000006622) #17	ENSSMRG00000006619	EMC8 (ENSSMRG00000006614) #18	COX4I1 (ENSSMRG00000006608) #19	ENSSMRG00000006605	ENSSMRG00000006601	IRF8 (ENSSMRG00000006592) #21	ENSSMRG00000006574	FOXF1 (ENSSMRG00000006571) #22	MTHFSD (ENSSMRG00000006568) #23	FOXC2 (ENSSMRG00000006567)	ZDHHC7 (ENSSMRG00000006547) #14	ENSSMRG00000006536	CRISPLD2 (ENSSMRG00000006527) #13	USP10 (ENSSMRG00000006518) #12	KLHL36 (ENSSMRG00000006517) #11	COTL1 (ENSSMRG00000006510) #10	MEAK7 (ENSSMRG00000006506) #9	ATP2C2 (ENSSMRG00000006482) #8	WFDC1 (ENSSMRG00000006465) #7	KCNG4 (ENSSMRG00000006447)	ENSSMRG00000006441	MLYCD (ENSSMRG00000006437)	CDH13 (ENSSMRG00000006433)
Common wall lizard	MODERN SPECIES	16	CDK10 (ENSPMRG00000011113)	SPATA2L (ENSPMRG00000011122)	KIAA0513 (ENSPMRG00000011129) #15	ENSPMRG00000011151	CIBAR2 (ENSPMRG00000011184)	ENSPMRG00000011198	ENSPMRG00000011200	GSE1 (ENSPMRG00000011207) #16	GINS2 (ENSPMRG00000011216) #17	ENSPMRG00000011220	EMC8 (ENSPMRG00000011224) #18	COX4I1 (ENSPMRG00000011226) #19	ENSPMRG00000011236	IRF8 (ENSPMRG00000011240) #21	MTHFSD (ENSPMRG00000011245) #23	FOXF1 (ENSPMRG00000011250) #22	FOXC2 (ENSPMRG00000011253)	ZDHHC7 (ENSPMRG00000011259) #14	ENSPMRG00000011265	CRISPLD2 (ENSPMRG00000011276) #13	ENSPMRG00000011284	USP10 (ENSPMRG00000011293) #12	ENSPMRG00000011308	ENSPMRG00000011313	KLHL36 (ENSPMRG00000011314) #11	COTL1 (ENSPMRG00000011318) #10	MEAK7 (ENSPMRG00000011322) #9	ATP2C2 (ENSPMRG00000011332) #8	RPGRIP1L (ENSPMRG00000011355)	FTO (ENSPMRG00000011411)	IRX3 (ENSPMRG00000011439)
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00390000003374 #29	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010606.`b.a	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140.d #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293	ENSGT00390000005410
Lizard	MODERN SPECIES	722																ENSACAG00000045511 #22
Elapidae	ANCESTRAL SPECIES	17	ENSGT00940000158707.a.b #28	ENSGT00520000055637.A.b #27	ENSGT00940000154158 #26	ENSGT00390000001368 #25	ENSGT00390000009535 #15	ENSGT00390000010606.`b.a	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01000000218436	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140.d #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293.sd	ENSGT00390000005410
Elapidae_a	ANCESTRAL SPECIES	28							ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT01000000218436	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140.c #21	ENSGT00940000158140.d #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293.sd	ENSGT00390000005410
Acanthophiinae	ANCESTRAL SPECIES	26								ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT01030000239461	ENSGT00940000164598	ENSGT00940000158140.c #21	ENSGT00940000158140.d #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000006293.sd	ENSGT00390000005410
Mainland tiger snake	MODERN SPECIES	216													GSE1 (ENSNSUG00000019007) #16	GINS2 (ENSNSUG00000019008) #17	EMC8 (ENSNSUG00000019009) #18	FOXF1 (ENSNSUG00000019010) #22	ENSNSUG00000019011 #23	ENSNSUG00000019012 #23	FOXC2 (ENSNSUG00000019013)	FOXL1 (ENSNSUG00000019014)	ZDHHC7 (ENSNSUG00000019015) #14	ENSNSUG00000019016	CRISPLD2 (ENSNSUG00000019017) #13	USP10 (ENSNSUG00000019018) #12	KLHL36 (ENSNSUG00000019019) #11	COTL1 (ENSNSUG00000019020) #10	MEAK7 (ENSNSUG00000019021) #9	ATP2C2 (ENSNSUG00000019022) #8	WFDC1 (ENSNSUG00000019450) #7	KCNG4 (ENSNSUG00000019451)	ENSNSUG00000019452
Eastern brown snake	MODERN SPECIES	65								GSE1 (ENSPTXG00000005933) #16	GINS2 (ENSPTXG00000005932) #17	EMC8 (ENSPTXG00000005930) #18	COX4I1 (ENSPTXG00000005929) #19	ENSPTXG00000005928	ENSPTXG00000005927	ENSPTXG00000005926 #21	IRF8 (ENSPTXG00000005925) #21	FOXF1 (ENSPTXG00000009839) #22	ENSPTXG00000009838 #23	ENSPTXG00000009837 #23	FOXC2 (ENSPTXG00000009836)	FOXL1 (ENSPTXG00000009835)	ZDHHC7 (ENSPTXG00000009834) #14	ENSPTXG00000009833	CRISPLD2 (ENSPTXG00000009827) #13	USP10 (ENSPTXG00000009823) #12	ENSPTXG00000009822 #11	ENSPTXG00000009821	MEAK7 (ENSPTXG00000009820) #9	ATP2C2 (ENSPTXG00000009818) #8	WFDC1 (ENSPTXG00000009813) #7	KCNG4 (ENSPTXG00000009812)	HSBP1 (ENSPTXG00000009811)
Blue-lipped sea krait	MODERN SPECIES	5330																FOXF1 (ENSLLTG00000008949) #22	MTHFSD (ENSLLTG00000008924) #23
Indian cobra	MODERN SPECIES	12	KLHDC4 (ENSNNAG00000018682) #29	JPH3 (ENSNNAG00000018678) #28	ZCCHC14 (ENSNNAG00000018676) #27	ENSNNAG00000018672 #26	ENSNNAG00000018670	FBXO31 (ENSNNAG00000018667) #25	KIAA0513 (ENSNNAG00000018660) #15	CIBAR2 (ENSNNAG00000018654)	GSE1 (ENSNNAG00000018645) #16	GINS2 (ENSNNAG00000018640) #17	ENSNNAG00000018637	EMC8 (ENSNNAG00000018633) #18	COX4I1 (ENSNNAG00000018630) #19	ENSNNAG00000018626	IRF8 (ENSNNAG00000018624) #21	FOXF1 (ENSNNAG00000018617) #22	MTHFSD (ENSNNAG00000018614) #23	FOXC2 (ENSNNAG00000018613)	FOXL1 (ENSNNAG00000018611)	ZDHHC7 (ENSNNAG00000018608) #14	ENSNNAG00000018600	CRISPLD2 (ENSNNAG00000018595) #13	USP10 (ENSNNAG00000018586) #12	COTL1 (ENSNNAG00000018579) #10	WFDC1 (ENSNNAG00000018573) #7	KCNG4 (ENSNNAG00000018562)	ENSNNAG00000018554	MLYCD (ENSNNAG00000018551)	CDH13 (ENSNNAG00000018524)	MPHOSPH6 (ENSNNAG00000018509)	ENSNNAG00000018505
Anura	ANCESTRAL SPECIES	92										ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619	ENSGT00940000162251	ENSGT00940000156519 #14	ENSGT00940000165027	ENSGT00940000157410 #13	ENSGT00550000074994 #12	ENSGT00940000157543 #11	ENSGT00390000012498 #10	ENSGT00940000158087 #9	ENSGT00940000160275 #8	ENSGT00390000014299 #7	ENSGT00940000156938	ENSGT00390000002381.b	ENSGT00390000006293
Leishan spiny toad	MODERN SPECIES	1	ZCCHC14 (ENSLLEG00000018586) #27	ENSLLEG00000018855 #26	FBXO31 (ENSLLEG00000018924) #25	KIAA0513 (ENSLLEG00000019138) #15	ENSLLEG00000019322	ENSLLEG00000019653	CIBAR2 (ENSLLEG00000019698)	ENSLLEG00000019919	GSE1 (ENSLLEG00000019997) #16	GINS2 (ENSLLEG00000020772) #17	ENSLLEG00000020836	EMC8 (ENSLLEG00000020878) #18	ENSLLEG00000020952 #19	IRF8 (ENSLLEG00000021127) #21	ENSLLEG00000021838	FOXF1 (ENSLLEG00000021875) #22	MTHFSD (ENSLLEG00000022027) #23	FOXC2 (ENSLLEG00000022126)	FOXL1 (ENSLLEG00000022133)	ENSLLEG00000022190	ZDHHC7 (ENSLLEG00000022239) #14	ENSLLEG00000022371	CRISPLD2 (ENSLLEG00000022729) #13	USP10 (ENSLLEG00000023153) #12	ENSLLEG00000024936	KLHL36 (ENSLLEG00000024973) #11	COTL1 (ENSLLEG00000025048) #10	MEAK7 (ENSLLEG00000025129) #9	ATP2C2 (ENSLLEG00000025301) #8	WFDC1 (ENSLLEG00000025933) #7	KCNG4 (ENSLLEG00000020617)
Frog	MODERN SPECIES	4	kiaa0513 (ENSXETG00000017409) #15	ENSXETG00000017418	cibar2 (ENSXETG00000017416)	ENSXETG00000042214	stk35 (ENSXETG00000004468) #16	gins2 (ENSXETG00000004469) #17	cfap157 (ENSXETG00000004470)	snrpe (ENSXETG00000004471)	emc8 (ENSXETG00000025153) #18	cox4i1 (ENSXETG00000004473) #19	ENSXETG00000047374	dusp22a (ENSXETG00000025152)	irf8 (ENSXETG00000003561) #21	ENSXETG00000040656	ENSXETG00000044424	foxf1 (ENSXETG00000003565) #22	kars1 (ENSXETG00000003569)	mthfsd (ENSXETG00000003563) #23	adat1 (ENSXETG00000003571)	ENSXETG00000045465	gabarapl2 (ENSXETG00000003573)	tmem231 (ENSXETG00000003575)	chst6 (ENSXETG00000045362)	plcg2 (ENSXETG00000003578)	sdr42e1 (ENSXETG00000048422)	hsd17b2 (ENSXETG00000003579)	mphosph6 (ENSXETG00000045183)	ENSXETG00000043412	cdh13 (ENSXETG00000006627)	mlycd (ENSXETG00000013233)	top1.2 (ENSXETG00000013237)
Coelacanth	MODERN SPECIES	506																FOXF1 (ENSLACG00000014221) #22	MTHFSD (ENSLACG00000013870) #23	FOXC2 (ENSLACG00000013717)	FOXL1 (ENSLACG00000013657)	ZDHHC7 (ENSLACG00000001696) #14
Actinopterygii	ANCESTRAL SPECIES	13	ENSGT00940000154593.b	ENSGT00390000011067.B	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000153229.A.a.a	ENSGT00390000009477	ENSGT00390000018903	ENSGT00940000160625	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00940000156519 #14	ENSGT00940000158316	ENSGT00390000010961	ENSGT00950000182971.A
Neopterygii	ANCESTRAL SPECIES	25	ENSGT01060000249485	ENSGT00390000011067.B	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00580000082227	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000155200	ENSGT00940000153229.A.a.a.b	ENSGT00390000009477	ENSGT00390000018903	ENSGT00940000160625	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00940000156519 #14	ENSGT00940000158316	ENSGT00390000010961
Osteoglossocephalai	ANCESTRAL SPECIES	91	ENSGT00940000157389	ENSGT01060000249485	ENSGT00390000011067.B	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000153229.A.a.a.b	ENSGT00390000009477	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	40	ENSGT00390000015299.a.a.a.n	ENSGT00940000161531.a.a.b	ENSGT00940000157389	ENSGT00390000011067.B	ENSGT00940000159646.k	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091.jb	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000158140.db #21	ENSGT00940000161035.a #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903.g	ENSGT00940000160625.r.a	ENSGT00940000159182	ENSGT00940000159115.b	ENSGT01030000234510.b.c	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a
Asian bonytongue	MODERN SPECIES	2	MAF (ENSSFOG00015028613)	wwox (ENSSFOG00015007310)	ENSSFOG00015007368	dynlrb2 (ENSSFOG00015007380)	CDYL2 (ENSSFOG00015007388)	cmc2 (ENSSFOG00015007417)	cenpn (ENSSFOG00015007436)	ATMIN (ENSSFOG00015007483)	PPP1R3E (ENSSFOG00015025897)	CIBAR2 (ENSSFOG00015007491)	gse1b (ENSSFOG00015007500) #16	gins2 (ENSSFOG00015007537) #17	emc8 (ENSSFOG00015025012) #18	cox4i1 (ENSSFOG00015007633) #19	irf8 (ENSSFOG00015007654) #21	foxf1 (ENSSFOG00015007688) #22	mthfsd (ENSSFOG00015007696) #23	gas8 (ENSSFOG00015007723)	DBNDD1 (ENSSFOG00015032073)	ENSSFOG00015007771	def8 (ENSSFOG00015007809)	ENSSFOG00015026929	mc1r (ENSSFOG00015007906)	tcf25 (ENSSFOG00015007942)	ENSSFOG00015007978	cyba (ENSSFOG00015007998) #35	mvda (ENSSFOG00015008032) #36	pdcd5 (ENSSFOG00015008074)	urahb (ENSSFOG00015008090)	ENSSFOG00015008104	CLEC18A (ENSSFOG00015008123)
P. kingsleyae	MODERN SPECIES	42																foxf1 (ENSPKIG00000019583) #22	mthfsd (ENSPKIG00000019658) #23	gas8 (ENSPKIG00000019725)	DBNDD1 (ENSPKIG00000019788)	ENSPKIG00000019817	def8 (ENSPKIG00000019850)	TUBB3 (ENSPKIG00000019889)	mc1r (ENSPKIG00000019904)	tcf25 (ENSPKIG00000019915)	cyba (ENSPKIG00000019944) #35	mvda (ENSPKIG00000019988) #36	pdcd5 (ENSPKIG00000020016)	urahb (ENSPKIG00000020038)	ENSPKIG00000020053	ENSPKIG00000020069	CLEC18A (ENSPKIG00000020083)
Osteoglossiformes	ANCESTRAL SPECIES	244														ENSGT00940000164598	ENSGT00940000158140.eb #21	ENSGT00940000161035.b #22	ENSGT00390000018903.h	ENSGT00940000160625.r.b	ENSGT00940000159115.a.a	ENSGT01030000234510.b.d	ENSGT00940000157600	ENSGT00390000010961.c	ENSGT00390000010961.d	ENSGT00940000158316	ENSGT00940000178271	ENSGT00940000156519.r #14	ENSGT00940000157021.n	ENSGT00940000153725.a.b.a	ENSGT00420000029847	ENSGT00940000156469.a	ENSGT00940000153216.a.a.c.a
Asian bonytongue	MODERN SPECIES	22	CPNE7 (ENSSFOG00015019566)	rpl13 (ENSSFOG00015028948)	ENSSFOG00015019625	ENSSFOG00015019642	psmd7 (ENSSFOG00015019662)	bco1 (ENSSFOG00015019750)	ENSSFOG00015019776	ENSSFOG00015019788	mafa (ENSSFOG00015029551)	ENSSFOG00015019845	ENSSFOG00015019855	ATMIN (ENSSFOG00015019871)	gse1b (ENSSFOG00015019928) #16	dusp22a (ENSSFOG00015020073)	irf8 (ENSSFOG00015020084) #21	foxf1 (ENSSFOG00015020091) #22	DBNDD1 (ENSSFOG00015020101)	ENSSFOG00015020116	ENSSFOG00015014131	mc1r (ENSSFOG00015020179)	ENSSFOG00015030264	ENSSFOG00015024905	WDR59 (ENSSFOG00015020229)	ENSSFOG00015000068	TMED6 (ENSSFOG00015000070)	ENSSFOG00015025056	zdhhc7 (ENSSFOG00015000116) #14	ANKRD27 (ENSSFOG00015000167)	RGS9BP (ENSSFOG00015026503)	ENSSFOG00015000297	zgc:165481 (ENSSFOG00015000302)
P. kingsleyae	MODERN SPECIES	125														ENSPKIG00000006034	irf8 (ENSPKIG00000006060) #21	foxf1 (ENSPKIG00000006095) #22	ENSPKIG00000006108	ENSPKIG00000006133	WDR59 (ENSPKIG00000006208)	ENSPKIG00000006330	TMED6 (ENSPKIG00000006341)	ENSPKIG00000006368	ENSPKIG00000006407	SLC7A9 (ENSPKIG00000006468)	ENSPKIG00000006486	SLC7A10 (ENSPKIG00000006520)	cebpa (ENSPKIG00000006573)	cebpg (ENSPKIG00000006578)	ctrb.2 (ENSPKIG00000006600)	ENSPKIG00000006632	hsd11b2 (ENSPKIG00000006657)
Clupeocephala	ANCESTRAL SPECIES	16	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000153229.A.a.a.b	ENSGT00390000009477	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128
Otomorpha	ANCESTRAL SPECIES	173	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903.m	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128
Clupeiformes	ANCESTRAL SPECIES	60	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477
Denticle herring	MODERN SPECIES	7	PPFIBP2 (ENSDCDG00000034508)	MAF (ENSDCDG00000034525)	CDYL2 (ENSDCDG00000034527)	cmc2 (ENSDCDG00000034528)	cenpn (ENSDCDG00000034530)	ATMIN (ENSDCDG00000034534)	PPP1R3E (ENSDCDG00000034537)	CIBAR2 (ENSDCDG00000034540)	gse1b (ENSDCDG00000034546) #16	ENSDCDG00000034581	gins2 (ENSDCDG00000034583) #17	emc8 (ENSDCDG00000034584) #18	cox4i1 (ENSDCDG00000034586) #19	dusp22a (ENSDCDG00000034588)	irf8 (ENSDCDG00000034590) #21	foxf1 (ENSDCDG00000034594) #22	mthfsd (ENSDCDG00000034601) #23	gas8 (ENSDCDG00000034609)	DOK4 (ENSDCDG00000034614)	ccdc102a (ENSDCDG00000034617)	adgrg1 (ENSDCDG00000034619)	ENSDCDG00000034620	slc7a6 (ENSDCDG00000034638)	slc7a6os (ENSDCDG00000034667)	scube2 (ENSDCDG00000034695)	tmem9b (ENSDCDG00000034754)	dennd2b (ENSDCDG00000034766)	RPL27A (ENSDCDG00000035006)	ENSDCDG00000035010	rerglb (ENSDCDG00000035015)	stk33 (ENSDCDG00000035024)
Otophysi	ANCESTRAL SPECIES	33	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903.m	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128
Cyprinoidei	ANCESTRAL SPECIES	162	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.b.c.a.b	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000155648.A.a.a	ENSGT00730000111007.a.b	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23
Cyprininae	ANCESTRAL SPECIES	1116															ENSGT00940000158140.fb #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23
Cyprininae_a	ANCESTRAL SPECIES	824															ENSGT00940000158140.fb #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	1862																foxf1 (ENSSGRG00000037170) #22	gpr183b (ENSSGRG00000037168)	ubac2 (ENSSGRG00000037166)	igf2bp2b (ENSSGRG00000037137)
Golden-line barbel	MODERN SPECIES	1462																foxf1 (ENSSGRG00000041522) #22	zgc:194221 (ENSSGRG00000041524)	gas8 (ENSSGRG00000041526)
Common carp reference	MODERN SPECIES	9	ENSCCRG00000048271 #19	ENSCCRG00000065148	ENSCCRG00000072079	ENSCCRG00000058783 #18	ENSCCRG00000042257	ENSCCRG00000058862	ENSCCRG00000013783	IRF8 (ENSCCRG00000015195) #21	ENSCCRG00000040531	ENSCCRG00000064198	ENSCCRG00000075116	ENSCCRG00000038231	ENSCCRG00000061588	ENSCCRG00000061228	ENSCCRG00000072803	ENSCCRG00000043592 #22	MTHFSD (ENSCCRG00000009383) #23	ENSCCRG00000070859	gins2 (ENSCCRG00000008615) #17	gse1b (ENSCCRG00000008618) #16	ENSCCRG00000042166	ENSCCRG00000042161	ATMIN (ENSCCRG00000063095)	cenpn (ENSCCRG00000042150)	CMC2 (ENSCCRG00000069947)	ENSCCRG00000078389	ENSCCRG00000076139	mafa (ENSCCRG00000079056)	ENSCCRG00000073026	ENSCCRG00000064204	spon1a (ENSCCRG00000063218)
Goldfish	MODERN SPECIES	48	gkap1 (ENSCARG00000001465)	hnrnpk (ENSCARG00000001458)	rmi1 (ENSCARG00000001437)	NTRK2 (ENSCARG00000001434)	ENSCARG00000001431	naa35 (ENSCARG00000001417)	gfpt1 (ENSCARG00000001154)	ENSCARG00000001085	ANTXR1 (ENSCARG00000001029)	ENSCARG00000000982	ENSCARG00000000981	ENSCARG00000000978	ENSCARG00000000975	ENSCARG00000000966	ENSCARG00000000963	foxf1 (ENSCARG00000000959) #22	ENSCARG00000000957	fahd2a (ENSCARG00000000954)	zgc:152830 (ENSCARG00000000932)	rnf10 (ENSCARG00000000906)	pop5 (ENSCARG00000000890)	olfml2a (ENSCARG00000000885)	ENSCARG00000000875	ENSCARG00000000869	ENSCARG00000000565	arpc5la (ENSCARG00000000479)	golga1 (ENSCARG00000000452)	ENSCARG00000000429	TMEM132C (ENSCARG00000000411)	slc15a4 (ENSCARG00000000385)	GLT1D1 (ENSCARG00000000330)
Zebrafish	MODERN SPECIES	9	ENSDARG00000061977	mafa (ENSDARG00000015890)	cmc2 (ENSDARG00000043635)	cenpn (ENSDARG00000043640)	mhc2dbb (ENSDARG00000056330)	ATMIN (ENSDARG00000068601)	si:ch73-103b9.2 (ENSDARG00000092489)	ENSDARG00000007976	ENSDARG00000093977	gse1b (ENSDARG00000062020) #16	gins2 (ENSDARG00000002304) #17	emc8 (ENSDARG00000017093) #18	cox4i1 (ENSDARG00000032970) #19	dusp22a (ENSDARG00000056396)	irf8 (ENSDARG00000056407) #21	foxf1 (ENSDARG00000015399) #22	mthfsd (ENSDARG00000062042) #23	cd151l (ENSDARG00000068629)	uraha (ENSDARG00000100719)	gas8 (ENSDARG00000101431)	mvda (ENSDARG00000099336) #36	cyba (ENSDARG00000018283) #35	pdcd5 (ENSDARG00000026072)	tcf25 (ENSDARG00000040861)	mc1r (ENSDARG00000020237)	def8 (ENSDARG00000068208)	ENSDARG00000114715	dhx36 (ENSDARG00000101059)	olfcs2 (ENSDARG00000100451)	olfcs1 (ENSDARG00000104241)	olfcw1 (ENSDARG00000100604)
Characiphysae	ANCESTRAL SPECIES	25	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.b	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d.k	ENSGT00390000010285.d.l	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903.m	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a
Channel catfish	MODERN SPECIES	23	maf (ENSIPUG00000006164)	cdyl2 (ENSIPUG00000006192)	ENSIPUG00000006213	cenpn (ENSIPUG00000006231)	ATMIN (ENSIPUG00000006337)	PPP1R3E (ENSIPUG00000006355)	ENSIPUG00000006380	CIBAR2 (ENSIPUG00000006386)	gse1 (ENSIPUG00000006415) #16	gins2 (ENSIPUG00000006459) #17	emc8 (ENSIPUG00000006484) #18	COX41 (ENSIPUG00000006497) #19	dusp22a (ENSIPUG00000006542)	IRF8 (ENSIPUG00000006571) #21	gas8 (ENSIPUG00000006643)	foxf1 (ENSIPUG00000006677) #22	mthfsd (ENSIPUG00000006695) #23	ENSIPUG00000006745	dbndd1 (ENSIPUG00000006763)	gas8 (ENSIPUG00000006773)	gas8 (ENSIPUG00000006808)	ENSIPUG00000006887	DEF8 (ENSIPUG00000006937)	TUBB3 (ENSIPUG00000006989)	mc1r (ENSIPUG00000007015)	tcf25 (ENSIPUG00000007030)	cyba (ENSIPUG00000007054) #35	mvd (ENSIPUG00000007071) #36	pdcd5 (ENSIPUG00000007119)	ENSIPUG00000007225	ENSIPUG00000007242
Characiphysae_b	ANCESTRAL SPECIES	22	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d.k	ENSGT00390000010285.d.l	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903.m	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159082	ENSGT00940000153725.a.b.a
Electric eel	MODERN SPECIES	35	SYT9 (ENSEEEG00000017341)	PPFIBP2 (ENSEEEG00000017180)	MAF (ENSEEEG00000017175)	CDYL2 (ENSEEEG00000017173)	cmc2 (ENSEEEG00000017172)	cenpn (ENSEEEG00000017169)	ATMIN (ENSEEEG00000017168)	ENSEEEG00000017166	CIBAR2 (ENSEEEG00000017165)	gse1b (ENSEEEG00000017163) #16	gins2 (ENSEEEG00000017159) #17	emc8 (ENSEEEG00000017157) #18	cox4i1 (ENSEEEG00000017154) #19	dusp22a (ENSEEEG00000017152)	irf8 (ENSEEEG00000017148) #21	foxf1 (ENSEEEG00000017147) #22	mthfsd (ENSEEEG00000017146) #23	gas8 (ENSEEEG00000017144)	DBNDD1 (ENSEEEG00000017143)	ENSEEEG00000017131	def8 (ENSEEEG00000017065)	TUBB3 (ENSEEEG00000017061)	mc1r (ENSEEEG00000017060)	tcf25 (ENSEEEG00000016702)	cyba (ENSEEEG00000016667) #35	mvda (ENSEEEG00000016660) #36	pdcd5 (ENSEEEG00000016650)	ENSEEEG00000016649	ENSEEEG00000016648	CLEC18A (ENSEEEG00000016642)	ENSEEEG00000016635
Characoidei	ANCESTRAL SPECIES	13	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a.h	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000010285.d.k	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903.m	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159082	ENSGT00940000156519.o #14
Red-bellied piranha	MODERN SPECIES		iqcg (ENSPNAG00000029169)	hipk3b (ENSPNAG00000004523)	ENSPNAG00000029019	ENSPNAG00000028959	spon1a (ENSPNAG00000028925)	SYT9 (ENSPNAG00000006499)	PPFIBP2 (ENSPNAG00000006221)	MAF (ENSPNAG00000004398)	gse1b (ENSPNAG00000028637) #16	gins2 (ENSPNAG00000028400) #17	emc8 (ENSPNAG00000028394) #18	cox4i1 (ENSPNAG00000028367) #19	dusp22a (ENSPNAG00000028360)	irf8 (ENSPNAG00000028347) #21	ENSPNAG00000028293	foxf1 (ENSPNAG00000028278) #22	mthfsd (ENSPNAG00000028263) #23	gas8 (ENSPNAG00000028225)	DBNDD1 (ENSPNAG00000028187)	ENSPNAG00000028178	def8 (ENSPNAG00000004307)	TUBB3 (ENSPNAG00000028087)	mc1r (ENSPNAG00000004302)	tcf25 (ENSPNAG00000004300)	cyba (ENSPNAG00000028044) #35	mvda (ENSPNAG00000028013) #36	ENSPNAG00000027927	ENSPNAG00000027906	CLEC18A (ENSPNAG00000005313)	ENSPNAG00000005220	PDPR (ENSPNAG00000006069)
Mexicana tetra	MODERN SPECIES	9	ENSAMXG00000038354	ENSAMXG00000003198	MAF (ENSAMXG00000003234)	CDYL2 (ENSAMXG00000003261)	cmc2 (ENSAMXG00000031858)	cenpn (ENSAMXG00000037478)	ATMIN (ENSAMXG00000044124)	PPP1R3E (ENSAMXG00000025809)	CIBAR2 (ENSAMXG00000043090)	gse1b (ENSAMXG00000003358) #16	gins2 (ENSAMXG00000037657) #17	emc8 (ENSAMXG00000029836) #18	cox4i1 (ENSAMXG00000042641) #19	dusp22a (ENSAMXG00000003438)	irf8 (ENSAMXG00000003452) #21	foxf1 (ENSAMXG00000003465) #22	mthfsd (ENSAMXG00000003476) #23	DBNDD1 (ENSAMXG00000034317)	ENSAMXG00000003503	def8 (ENSAMXG00000038632)	ENSAMXG00000031816	tcf25 (ENSAMXG00000003532)	gas8 (ENSAMXG00000043206)	cyba (ENSAMXG00000033591) #35	mvda (ENSAMXG00000003563) #36	pdcd5 (ENSAMXG00000035216)	ENSAMXG00000031613	ENSAMXG00000032244	CLEC18A (ENSAMXG00000003606)	ENSAMXG00000003622	PDPR (ENSAMXG00000003624)
Euteleosteomorpha	ANCESTRAL SPECIES	94	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128
Protacanthopterygii	ANCESTRAL SPECIES	2	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a.c	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085.d.a	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	514						ENSGT00390000010285.d.g	ENSGT00700000104539.b.a.e #16	ENSGT00390000007838.d.a #17	ENSGT00390000006738.a.c #18	ENSGT00700000104539.b.a.f #16	ENSGT00390000007838.c #17	ENSGT00390000006738.a.d #18	ENSGT00390000002407.d #19	ENSGT00940000164598.b	ENSGT00940000158140.ib #21	ENSGT00940000161035.e.a #22	ENSGT00940000161035.e.b #22	ENSGT00390000011730 #23	ENSGT00390000009477.q	ENSGT00390000018903.j	ENSGT00390000009477.r	ENSGT00390000018903.i	ENSGT00940000160625.r.b.b	ENSGT00940000159182.h
Salmoninae_a	ANCESTRAL SPECIES	72	ENSGT00940000155948.b.a.d	ENSGT01050000244951.a.b.a.a.g.b.h	ENSGT00940000161531.a.a.c.b	ENSGT00500000044904.a.b.g.b.d	ENSGT00940000159646.i.a	ENSGT00390000004738.y	ENSGT00390000016908.n	ENSGT00940000161906.d	ENSGT00390000010285.d.g	ENSGT00700000104539.b.a.e #16	ENSGT00390000007838.d.a #17	ENSGT00390000006738.a.c #18	ENSGT00390000002407.d #19	ENSGT00940000164598.b	ENSGT00940000158140.ib #21	ENSGT00940000161035.e.a #22	ENSGT00390000011730.d #23	ENSGT00390000009477.q	ENSGT00390000018903.i	ENSGT00940000160625.r.b.b	ENSGT00940000159182.h	ENSGT00940000161035.e.b #22	ENSGT00390000011730.c.b #23	ENSGT00390000009477.r	ENSGT00390000018903.j	ENSGT00940000160625.r.b.a	ENSGT00940000159182.g.a	ENSGT00940000159115.c.a	ENSGT01030000234510.b.e	ENSGT00940000159182.g.b	ENSGT00940000159115.c.b
Oncorhynchus	ANCESTRAL SPECIES	32	ENSGT00940000155948.b.a.d	ENSGT01050000244951.a.b.a.a.g.b.h	ENSGT00940000161531.a.a.c.b	ENSGT00500000044904.a.b.g.b.d	ENSGT00940000159646.i.a	ENSGT00390000004738.y	ENSGT00390000016908.n	ENSGT00390000013091.fb	ENSGT00940000161906.d	ENSGT00390000010285.d.g.a	ENSGT00700000104539.b.a.e.c #16	ENSGT00390000007838.d.a #17	ENSGT00390000006738.a.c.a.b #18	ENSGT00390000002407.d.lb #19	ENSGT00940000158140.ib.b #21	ENSGT00940000161035.e.a #22	ENSGT00390000011730.d #23	ENSGT00390000009477.r	ENSGT00390000018903.j	ENSGT00940000160625.r.b.a	ENSGT00940000159182.g.a	ENSGT00940000159115.c.a	ENSGT01030000234510.b.f	ENSGT00390000005563.e	ENSGT00390000002290.k #35	ENSGT00390000015359.d.a #36	ENSGT00390000011085.d.b	ENSGT00940000153229.A.a.a.a.o.a	ENSGT00940000168437.a	ENSGT00900000141128.g.b	ENSGT00940000165218.a.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	28	ENSGT00940000155948.b.a.d	ENSGT01050000244951.a.b.a.a.g.b.h	ENSGT00940000161531.a.a.c.b	ENSGT00500000044904.a.b.g.b.d	ENSGT00940000159646.i.a	ENSGT00390000004738.y	ENSGT00390000016908.n	ENSGT00390000013091.fb	ENSGT00940000161906.d	ENSGT00390000010285.d.g.a	ENSGT00700000104539.b.a.e.c #16	ENSGT00390000007838.d.a #17	ENSGT00390000006738.a.c.a.b #18	ENSGT00390000002407.d.lb #19	ENSGT00940000158140.ib.b #21	ENSGT00940000161035.e.a #22	ENSGT00390000011730.c.a #23	ENSGT00390000009477.r	ENSGT00390000018903.j	ENSGT00940000160625.r.b.a	ENSGT00940000159182.g.a	ENSGT00940000159115.c.a	ENSGT01030000234510.b.f	ENSGT00390000005563.e	ENSGT00390000002290.k #35	ENSGT00390000015359.d.a #36	ENSGT00390000011085.d.b	ENSGT00940000153229.A.a.a.a.o.a	ENSGT00940000168437.a	ENSGT00900000141128.g.b	ENSGT00940000165218.a.a.b
Coho salmon	MODERN SPECIES	28	PPFIBP2 (ENSOKIG00005005533)	MAF (ENSOKIG00005005519)	ENSOKIG00005005502	CDYL2 (ENSOKIG00005005495)	cenpn (ENSOKIG00005005482)	cmc2 (ENSOKIG00005005479)	ATMIN (ENSOKIG00005005475)	ENSOKIG00005005466	ENSOKIG00005005462	ENSOKIG00005005459	gse1b (ENSOKIG00005005427) #16	gins2 (ENSOKIG00005005401) #17	emc8 (ENSOKIG00005005386) #18	cox4i1 (ENSOKIG00005005372) #19	irf8 (ENSOKIG00005005330) #21	foxf1 (ENSOKIG00005005314) #22	MTHFSD (ENSOKIG00005005302) #23	ENSOKIG00005005285	GAS8 (ENSOKIG00005005277)	DBNDD1 (ENSOKIG00005005262)	ENSOKIG00005005181	DEF8 (ENSOKIG00005004911)	mc1r (ENSOKIG00005004859)	tcf25 (ENSOKIG00005004639)	cyba (ENSOKIG00005004575) #35	mvda (ENSOKIG00005004539) #36	PDCD5 (ENSOKIG00005004452)	ENSOKIG00005004435	ENSOKIG00005004417	ENSOKIG00005004366	ENSOKIG00005004171
Chinook salmon	MODERN SPECIES	3	KLHL30 (ENSOTSG00005019844)	aktip (ENSOTSG00005019835)	ENSOTSG00005019832	ENSOTSG00005019800	ENSOTSG00005019789	tollip (ENSOTSG00005019730)	spon1a (ENSOTSG00005019727)	SYT9 (ENSOTSG00005019725)	PPFIBP2 (ENSOTSG00005019723)	MAF (ENSOTSG00005019721)	gins2 (ENSOTSG00005019720) #17	emc8 (ENSOTSG00005019719) #18	ENSOTSG00005019718	cox4i1 (ENSOTSG00005019717) #19	irf8 (ENSOTSG00005019696) #21	foxf1 (ENSOTSG00005019694) #22	mthfsd (ENSOTSG00005019677) #23	ENSOTSG00005019669	gas8 (ENSOTSG00005019667)	DBNDD1 (ENSOTSG00005019666)	ENSOTSG00005019664	def8 (ENSOTSG00005017644)	TUBB3 (ENSOTSG00005017643)	mc1r (ENSOTSG00005017642)	tcf25 (ENSOTSG00005017640)	cyba (ENSOTSG00005017638) #35	mvda (ENSOTSG00005017636) #36	pdcd5 (ENSOTSG00005017627)	ENSOTSG00005017625	ENSOTSG00005017624	ENSOTSG00005017622
Rainbow trout	MODERN SPECIES	18	ATMIN (ENSOMYG00000041607)	ENSOMYG00000041599	ENSOMYG00000055637	CIBAR2 (ENSOMYG00000041592)	ENSOMYG00000055252	ENSOMYG00000050931	ENSOMYG00000061944	gse1b (ENSOMYG00000067020) #16	gins2 (ENSOMYG00000041586) #17	emc8 (ENSOMYG00000041580) #18	ENSOMYG00000041579	cox4i1 (ENSOMYG00000041573) #19	dusp22a (ENSOMYG00000071017)	ENSOMYG00000055139	irf8 (ENSOMYG00000041511) #21	foxf1 (ENSOMYG00000041502) #22	MTHFSD (ENSOMYG00000041495) #23	ENSOMYG00000041489	GAS8 (ENSOMYG00000041482)	DBNDD1 (ENSOMYG00000041477)	ENSOMYG00000041388	DEF8 (ENSOMYG00000041087)	TUBB3 (ENSOMYG00000041036)	MC1R (ENSOMYG00000041033)	tcf25 (ENSOMYG00000039841)	p22-phox (ENSOMYG00000039445) #35	mvda (ENSOMYG00000039421) #36	ENSOMYG00000039255	ENSOMYG00000039210	ENSOMYG00000039204	ENSOMYG00000039179
Huchen	MODERN SPECIES	2280																foxf1 (ENSHHUG00000051701) #22	mthfsd (ENSHHUG00000051700) #23	ENSHHUG00000051698	gas8 (ENSHHUG00000051697)	ENSHHUG00000051696	gpr19 (ENSHHUG00000051693)
Salmoninae	ANCESTRAL SPECIES	514					ENSGT00390000010285.d.g	ENSGT00700000104539.b.a.e #16	ENSGT00390000007838.d.a #17	ENSGT00390000006738.a.c #18	ENSGT00700000104539.b.a.f #16	ENSGT00390000007838.c #17	ENSGT00390000006738.a.d #18	ENSGT00390000002407.d #19	ENSGT00940000164598.b	ENSGT00940000158140.ib #21	ENSGT00940000161035.e.a #22	ENSGT00940000161035.e.b #22	ENSGT00390000011730 #23	ENSGT00390000009477.q	ENSGT00390000018903.j	ENSGT00390000009477.r	ENSGT00390000018903.i	ENSGT00940000160625.r.b.b	ENSGT00940000159182.h
Salmoninae_a	ANCESTRAL SPECIES	72	ENSGT00390000016908.n	ENSGT00940000161906.d	ENSGT00390000010285.d.g	ENSGT00700000104539.b.a.e #16	ENSGT00390000007838.d.a #17	ENSGT00390000006738.a.c #18	ENSGT00390000002407.d #19	ENSGT00940000164598.b	ENSGT00940000158140.ib #21	ENSGT00940000161035.e.a #22	ENSGT00390000011730.d #23	ENSGT00390000009477.q	ENSGT00390000018903.i	ENSGT00940000160625.r.b.b	ENSGT00940000159182.h	ENSGT00940000161035.e.b #22	ENSGT00390000011730.c.b #23	ENSGT00390000009477.r	ENSGT00390000018903.j	ENSGT00940000160625.r.b.a	ENSGT00940000159182.g.a	ENSGT00940000159115.c.a	ENSGT01030000234510.b.e	ENSGT00940000159182.g.b	ENSGT00940000159115.c.b	ENSGT01030000234510.b.f	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359.d.a #36	ENSGT00390000011085.d.b	ENSGT00940000153229.A.a.a.a.o.a
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000155948.b.a.c	ENSGT01050000244951.a.b.a.a.g.b.g	ENSGT01090000262925	ENSGT00940000161531.a.a.c.a	ENSGT00940000159646.i.b	ENSGT00390000016908.m	ENSGT00390000004738.z	ENSGT00390000013091.gb	ENSGT00940000161906.c	ENSGT00390000010285.d.h	ENSGT00700000104539.b.a.f #16	ENSGT00390000006738.a.c.a.a #18	ENSGT00390000002407.d.mb #19	ENSGT00940000164598.b	ENSGT00940000158140.ib.a #21	ENSGT00940000161035.e.b #22	ENSGT00390000011730.c.b #23	ENSGT00390000009477.q	ENSGT01010000224458.b	ENSGT00390000018903.i	ENSGT00940000160625.r.b.b	ENSGT00940000159182.g.b	ENSGT00940000159115.c.b	ENSGT01030000234510.b.e	ENSGT00390000005563.f	ENSGT00390000002290.l #35	ENSGT00390000015359.d.b #36	ENSGT00390000011085.c	ENSGT00940000153229.A.a.a.a.o.b	ENSGT00940000168437.b.a	ENSGT00900000141128.g.a
Rainbow trout	MODERN SPECIES	27	cmc2 (ENSOMYG00000015675)	cenpn (ENSOMYG00000041611)	ATMIN (ENSOMYG00000015647)	ENSOMYG00000015633	CIBAR2 (ENSOMYG00000015629)	ENSOMYG00000009138	ENSOMYG00000077595	ENSOMYG00000066690	gse1b (ENSOMYG00000015591) #16	ENSOMYG00000067011	gins2 (ENSOMYG00000015561) #17	emc8 (ENSOMYG00000027633) #18	COX41 (ENSOMYG00000027622) #19	dusp22a (ENSOMYG00000063021)	irf8 (ENSOMYG00000027543) #21	foxf1 (ENSOMYG00000027496) #22	MTHFSD (ENSOMYG00000027461) #23	ENSOMYG00000026931	GAS8 (ENSOMYG00000027068)	DBNDD1 (ENSOMYG00000026920)	ENSOMYG00000026851	DEF8 (ENSOMYG00000026391)	TUBB3 (ENSOMYG00000026304)	mc1r (ENSOMYG00000026295)	TCF25 (ENSOMYG00000023778)	ENSOMYG00000023175 #36	ENSOMYG00000023143	ENSOMYG00000023079	ENSOMYG00000023067	ENSOMYG00000023036	ENSOMYG00000023022
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000155948.b.a.c	ENSGT01050000244951.a.b.a.a.g.b.g	ENSGT01090000262925	ENSGT00940000161531.a.a.c.a	ENSGT00940000159646.i.b	ENSGT00390000016908.m	ENSGT00390000004738.z	ENSGT00390000013091.gb	ENSGT00940000161906.c	ENSGT00390000010285.d.h	ENSGT00700000104539.b.a.f #16	ENSGT00390000006738.a.c.a.a #18	ENSGT00390000002407.d.mb #19	ENSGT00940000164598.b	ENSGT00940000158140.ib.a #21	ENSGT00940000161035.e.b #22	ENSGT00390000011730.c.b #23	ENSGT00390000009477.q	ENSGT01010000224458.b	ENSGT00390000018903.i	ENSGT00940000160625.r.b.b	ENSGT00940000159182.g.b	ENSGT00940000159115.c.b	ENSGT01030000234510.b.e	ENSGT00390000005563.f	ENSGT00390000002290.l #35	ENSGT00390000015359.d.b #36	ENSGT00390000011085.c	ENSGT00940000168437.b.a	ENSGT00900000141128.g.a	ENSGT00940000165218.a.a.a
Coho salmon	MODERN SPECIES	22	PPFIBP2 (ENSOKIG00005025532)	MAF (ENSOKIG00005025485)	ENSOKIG00005025475	CDYL2 (ENSOKIG00005025351)	cmc2 (ENSOKIG00005025339)	cenpn (ENSOKIG00005025286)	ATMIN (ENSOKIG00005025254)	ENSOKIG00005025217	CIBAR2 (ENSOKIG00005025206)	ENSOKIG00005025199	gse1b (ENSOKIG00005025184) #16	emc8 (ENSOKIG00005025137) #18	cox4i1 (ENSOKIG00005025111) #19	dusp22a (ENSOKIG00005025086)	irf8 (ENSOKIG00005024997) #21	foxf1 (ENSOKIG00005024986) #22	MTHFSD (ENSOKIG00005024959) #23	ENSOKIG00005024930	gas8 (ENSOKIG00005024543)	ENSOKIG00005024512	DBNDD1 (ENSOKIG00005024491)	ENSOKIG00005024284	def8 (ENSOKIG00005024189)	TUBB3 (ENSOKIG00005024142)	MC1R (ENSOKIG00005024139)	tcf25 (ENSOKIG00005022400)	CYBA (ENSOKIG00005022306) #35	mvda (ENSOKIG00005022270) #36	PDCD5 (ENSOKIG00005022246)	ENSOKIG00005022237	ENSOKIG00005022227
Chinook salmon	MODERN SPECIES	28	ENSOTSG00005003721	tollip (ENSOTSG00005003439)	spon1a (ENSOTSG00005002842)	CDYL2 (ENSOTSG00005002802)	cmc2 (ENSOTSG00005002794)	cenpn (ENSOTSG00005002785)	ATMIN (ENSOTSG00005002781)	ENSOTSG00005002779	ENSOTSG00005002776	ENSOTSG00005002770	cmc2 (ENSOTSG00005002762)	cenpn (ENSOTSG00005002758)	ATMIN (ENSOTSG00005002755)	ENSOTSG00005019398	CIBAR2 (ENSOTSG00005019394)	foxf1 (ENSOTSG00005019392) #22	mthfsd (ENSOTSG00005019389) #23	gas8 (ENSOTSG00005019294)	ENSOTSG00005019293	DBNDD1 (ENSOTSG00005019292)	ENSOTSG00005019290	def8 (ENSOTSG00005019287)	TUBB3 (ENSOTSG00005019285)	mc1r (ENSOTSG00005019283)	tcf25 (ENSOTSG00005015447)	cyba (ENSOTSG00005015443) #35	mvda (ENSOTSG00005015440) #36	pdcd5 (ENSOTSG00005015438)	ENSOTSG00005015437	ENSOTSG00005015436	ENSOTSG00005015435
Huchen	MODERN SPECIES	1018																foxf1 (ENSHHUG00000030446) #22	mthfsd (ENSHHUG00000030448) #23	DBNDD1 (ENSHHUG00000030459)	gas8 (ENSHHUG00000030468)	ENSHHUG00000030488	def8 (ENSHHUG00000030530)	TUBB3 (ENSHHUG00000030672)	mc1r (ENSHHUG00000030675)	tcf25 (ENSHHUG00000030696)	cyba (ENSHHUG00000030844) #35	mvda (ENSHHUG00000030860) #36	pdcd5 (ENSHHUG00000031011)	ENSHHUG00000031114	ENSHHUG00000031124
Salmoninae	ANCESTRAL SPECIES	1325														ENSGT00940000164598.a.b	ENSGT00940000158140.hb #21	ENSGT00940000161035.f #22
Salmoninae_a	ANCESTRAL SPECIES	295														ENSGT00940000164598.a.b	ENSGT00940000158140.hb #21	ENSGT00940000161035.f #22	ENSGT00390000011730.c.a #23
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	27	ENSGT00940000155948.b.a.d	ENSGT01050000244951.a.b.a.a.g.b.h	ENSGT00940000161531.a.a.c.b	ENSGT00500000044904.a.b.g.b.d	ENSGT00940000159646.i.a	ENSGT00390000016908.m	ENSGT00390000004738.y	ENSGT00390000013091.db	ENSGT00940000161906.d	ENSGT00390000010285.d.h.b	ENSGT00390000007838.c #17	ENSGT00390000006738.a.d #18	ENSGT00390000002407.d.kb #19	ENSGT00940000164598.a.b	ENSGT00940000158140.hb #21	ENSGT00940000161035.f.a #22	ENSGT00390000011730.d #23	ENSGT00940000155200.tb	ENSGT00390000009477.r.b	ENSGT00390000018903.j	ENSGT00940000160625.r.b.a	ENSGT00940000159182.g.a	ENSGT00940000159182.g.b.b	ENSGT00940000159115.c.b	ENSGT01030000234510.b.f	ENSGT00390000005563.h	ENSGT00390000002290.j #35	ENSGT00390000015359.d.a #36	ENSGT00390000011085.d.a.a	ENSGT00940000153229.A.a.a.a.p	ENSGT00940000168437.a
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000038342	cmc2 (ENSSSAG00000038143)	cenpn (ENSSSAG00000037933)	ATMIN (ENSSSAG00000050004)	ENSSSAG00000049998	CIBAR2 (ENSSSAG00000049989)	ENSSSAG00000111397	ENSSSAG00000116182	gse1b (ENSSSAG00000116899) #16	psf2 (ENSSSAG00000117735) #17	emc8 (ENSSSAG00000085606) #18	cox4i1 (ENSSSAG00000049919) #19	ENSSSAG00000119134	dusp22a (ENSSSAG00000114757)	irf8 (ENSSSAG00000049853) #21	foxf1 (ENSSSAG00000049836) #22	MTHFSD (ENSSSAG00000052364) #23	ENSSSAG00000049816	GAS8 (ENSSSAG00000049758)	ENSSSAG00000049743	ENSSSAG00000113662	ENSSSAG00000047315	DEF8 (ENSSSAG00000046994)	TBB3 (ENSSSAG00000111099)	MC1R (ENSSSAG00000117879)	TCF25 (ENSSSAG00000041510)	ENSSSAG00000049679 #36	ENSSSAG00000049696	ENSSSAG00000041232	ENSSSAG00000043685	ENSSSAG00000043643
River trout	MODERN SPECIES	3	spon1a (ENSSTUG00000021488)	SYT9 (ENSSTUG00000021450)	PPFIBP2 (ENSSTUG00000021181)	ENSSTUG00000021161	MAF (ENSSTUG00000021149)	CDYL2 (ENSSTUG00000021143)	cmc2 (ENSSTUG00000021141)	cenpn (ENSSTUG00000021132)	ATMIN (ENSSTUG00000021129)	ENSSTUG00000021123	CIBAR2 (ENSSTUG00000021116)	gins2 (ENSSTUG00000021108) #17	emc8 (ENSSTUG00000021078) #18	cox4i1 (ENSSTUG00000021068) #19	irf8 (ENSSTUG00000021023) #21	foxf1 (ENSSTUG00000021013) #22	mthfsd (ENSSTUG00000020999) #23	ENSSTUG00000020974	gas8 (ENSSTUG00000020922)	DBNDD1 (ENSSTUG00000020908)	ENSSTUG00000020783	def8 (ENSSTUG00000020516)	TUBB3 (ENSSTUG00000020507)	mc1r (ENSSTUG00000020496)	tcf25 (ENSSTUG00000019665)	cyba (ENSSTUG00000019633) #35	mvda (ENSSTUG00000019621) #36	pdcd5 (ENSSTUG00000019531)	ENSSTUG00000019520	ENSSTUG00000019515	ENSSTUG00000019492
Salmo	ANCESTRAL SPECIES	30	ENSGT00940000155948.b.a.c	ENSGT01050000244951.a.b.a.a.g.b.g	ENSGT00940000161531.a.a.c.a	ENSGT00940000159646.i.b	ENSGT00390000016908.n	ENSGT00390000004738.z	ENSGT00390000013091.eb	ENSGT00530000067249	ENSGT00940000161906.c	ENSGT00390000010285.d.h.a	ENSGT00700000104539.b.a.e #16	ENSGT00390000006738.a.c #18	ENSGT00390000002407.d.jb #19	ENSGT00940000164598.a.a	ENSGT00940000158140.ib #21	ENSGT00940000161035.f.b #22	ENSGT00390000011730.c.b #23	ENSGT00390000009477.q	ENSGT00390000018903.i	ENSGT00940000160625.r.b.b	ENSGT00940000159182.g.b.a	ENSGT00940000159115.c.a	ENSGT01030000234510.b.e	ENSGT00390000005563.g	ENSGT00390000002290.i #35	ENSGT00390000015359.d.b #36	ENSGT00390000011085.d.a.b	ENSGT00940000168437.b	ENSGT00900000141128.g.a	ENSGT00940000165218.a.a	ENSGT00940000159749.f
River trout	MODERN SPECIES	21	ENSSTUG00000013692	MAF (ENSSTUG00000013706)	ENSSTUG00000013709	CDYL2 (ENSSTUG00000013712)	cmc2 (ENSSTUG00000013722)	cenpn (ENSSTUG00000013730)	ATMIN (ENSSTUG00000013743)	ENSSTUG00000013748	ENSSTUG00000013755	CIBAR2 (ENSSTUG00000013765)	ENSSTUG00000013782	emc8 (ENSSTUG00000013791) #18	cox4i1 (ENSSTUG00000013801) #19	irf8 (ENSSTUG00000013817) #21	ENSSTUG00000013861	foxf1 (ENSSTUG00000013862) #22	MTHFSD (ENSSTUG00000013870) #23	gas8 (ENSSTUG00000013908)	ENSSTUG00000013964	DBNDD1 (ENSSTUG00000013969)	ENSSTUG00000014000	def8 (ENSSTUG00000014164)	TUBB3 (ENSSTUG00000014284)	mc1r (ENSSTUG00000014295)	tcf25 (ENSSTUG00000014347)	cyba (ENSSTUG00000016340) #35	mvda (ENSSTUG00000016354) #36	pdcd5 (ENSSTUG00000016412)	ENSSTUG00000016463	ENSSTUG00000016473	ENSSTUG00000016492
Atlantic salmon	MODERN SPECIES	18	cmc2 (ENSSSAG00000052629)	ENSSSAG00000052619	ENSSSAG00000052586	ENSSSAG00000105747	CIBAR2 (ENSSSAG00000112039)	ENSSSAG00000084798	ENSSSAG00000121577	ENSSSAG00000114913	ENSSSAG00000116433	gse1b (ENSSSAG00000113104) #16	ENSSSAG00000091800	emc8 (ENSSSAG00000052526) #18	cox4i1 (ENSSSAG00000052502) #19	dusp22a (ENSSSAG00000052429)	irf8 (ENSSSAG00000083711) #21	foxf1 (ENSSSAG00000111023) #22	MTHFSD (ENSSSAG00000085072) #23	gas8 (ENSSSAG00000052213)	DBNDD1 (ENSSSAG00000052175)	ENSSSAG00000043674	DEF8 (ENSSSAG00000101607)	tbb3 (ENSSSAG00000046978)	tcf25 (ENSSSAG00000043934)	ENSSSAG00000108351 #35	erg19 (ENSSSAG00000041375) #36	ENSSSAG00000041293	ENSSSAG00000041273	ENSSSAG00000043701	ENSSSAG00000041207	kif7 (ENSSSAG00000043622)	ENSSSAG00000041653
Northern pike	MODERN SPECIES	1	ENSELUG00000001489	tollip (ENSELUG00000010125)	MAF (ENSELUG00000010148)	CDYL2 (ENSELUG00000001080)	cmc2 (ENSELUG00000010206)	cenpn (ENSELUG00000010225)	ATMIN (ENSELUG00000010232)	ENSELUG00000010237	CIBAR2 (ENSELUG00000010263)	gse1b (ENSELUG00000010341) #16	gins2 (ENSELUG00000010371) #17	emc8 (ENSELUG00000010382) #18	cox4i1 (ENSELUG00000010435) #19	dusp22a (ENSELUG00000010452)	irf8 (ENSELUG00000010474) #21	foxf1 (ENSELUG00000010487) #22	mthfsd (ENSELUG00000010525) #23	gas8 (ENSELUG00000010570)	DBNDD1 (ENSELUG00000025369)	ENSELUG00000010644	def8 (ENSELUG00000010657)	TUBB3 (ENSELUG00000010664)	mc1r (ENSELUG00000010670)	tcf25 (ENSELUG00000010687)	cyba (ENSELUG00000010707) #35	mvda (ENSELUG00000010740) #36	pdcd5 (ENSELUG00000010839)	ENSELUG00000010861	ENSELUG00000010879	CLEC18A (ENSELUG00000010944)	ENSELUG00000001372
Acanthomorphata	ANCESTRAL SPECIES	18	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00390000010285.d	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749
Cod	MODERN SPECIES	5	ENSGMOG00000029580	ENSGMOG00000031928	ENSGMOG00000026846	cmc2 (ENSGMOG00000010901)	cenpn (ENSGMOG00000010889)	ATMIN (ENSGMOG00000030655)	ENSGMOG00000033155	CIBAR2 (ENSGMOG00000035566)	gse1b (ENSGMOG00000004047) #16	gins2 (ENSGMOG00000004029) #17	emc8 (ENSGMOG00000022548) #18	cox4i1 (ENSGMOG00000003997) #19	dusp22a (ENSGMOG00000003973)	irf8 (ENSGMOG00000003945) #21	ENSGMOG00000033433	foxf1 (ENSGMOG00000003941) #22	MTHFSD (ENSGMOG00000003911) #23	GAS8 (ENSGMOG00000003802)	DBNDD1 (ENSGMOG00000003796)	DEF8 (ENSGMOG00000003774)	MC1R (ENSGMOG00000019737)	tcf25 (ENSGMOG00000003733)	ENSGMOG00000003713 #35	mvda (ENSGMOG00000003682) #36	ENSGMOG00000003666	ENSGMOG00000003656	ENSGMOG00000036097	ENSGMOG00000003762	ENSGMOG00000014541	bcl2l10 (ENSGMOG00000028878)	gnb5b (ENSGMOG00000016396)
Euacanthomorphacea	ANCESTRAL SPECIES	23	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000009477	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749
Pinecone sodierfish	MODERN SPECIES	17	ENSMMDG00005009719	ENSMMDG00005009723	ENSMMDG00005009724	MAF (ENSMMDG00005009726)	CDYL2 (ENSMMDG00005009728)	cmc2 (ENSMMDG00005009730)	cenpn (ENSMMDG00005009732)	ATMIN (ENSMMDG00005009733)	ENSMMDG00005009734	gse1b (ENSMMDG00005009736) #16	gins2 (ENSMMDG00005009737) #17	emc8 (ENSMMDG00005009739) #18	cox4i1 (ENSMMDG00005009744) #19	dusp22a (ENSMMDG00005009762)	irf8 (ENSMMDG00005009766) #21	foxf1 (ENSMMDG00005009774) #22	mthfsd (ENSMMDG00005009778) #23	gas8 (ENSMMDG00005009783)	gas8 (ENSMMDG00005009795)	DBNDD1 (ENSMMDG00005009848)	ENSMMDG00005009858	def8 (ENSMMDG00005010044)	mc1r (ENSMMDG00005010547)	tcf25 (ENSMMDG00005010579)	cyba (ENSMMDG00005012132) #35	mvda (ENSMMDG00005012135) #36	pdcd5 (ENSMMDG00005012147)	uraha (ENSMMDG00005012164)	CLEC18A (ENSMMDG00005012168)	ENSMMDG00005012173	zgc:194679 (ENSMMDG00005012185)
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00940000177011
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Oryzias	ANCESTRAL SPECIES	13	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00950000182844.b.b.b.a.a
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00940000177011	ENSGT00950000182844.b.b.b.a.a
Indian medaka	MODERN SPECIES	26	spon1a (ENSOMEG00000003700)	ENSOMEG00000003636	PPFIBP2 (ENSOMEG00000003605)	MAF (ENSOMEG00000003546)	CDYL2 (ENSOMEG00000003527)	cmc2 (ENSOMEG00000003502)	cenpn (ENSOMEG00000003497)	ATMIN (ENSOMEG00000003483)	ENSOMEG00000003474	gse1b (ENSOMEG00000003436) #16	gins2 (ENSOMEG00000003295) #17	emc8 (ENSOMEG00000003284) #18	cox4i1 (ENSOMEG00000003270) #19	dusp22a (ENSOMEG00000003238)	irf8 (ENSOMEG00000003132) #21	foxf1 (ENSOMEG00000002898) #22	mthfsd (ENSOMEG00000002887) #23	DBNDD1 (ENSOMEG00000002872)	ENSOMEG00000002867	def8 (ENSOMEG00000002853)	mc1r (ENSOMEG00000002838)	tcf25 (ENSOMEG00000001008)	cyba (ENSOMEG00000002819) #35	mvda (ENSOMEG00000002813) #36	pdcd5 (ENSOMEG00000002804)	uraha (ENSOMEG00000002800)	CLEC18A (ENSOMEG00000002795)	ENSOMEG00000002785	kif7 (ENSOMEG00000002772)	ENSOMEG00000002752	rhcgl1 (ENSOMEG00000002745)
Javanese ricefish	MODERN SPECIES	17	spon1a (ENSOJAG00000011311)	ENSOJAG00000011291	PPFIBP2 (ENSOJAG00000011033)	MAF (ENSOJAG00000010995)	CDYL2 (ENSOJAG00000010983)	cmc2 (ENSOJAG00000010974)	cenpn (ENSOJAG00000010913)	ATMIN (ENSOJAG00000010900)	ENSOJAG00000010860	gse1b (ENSOJAG00000010277) #16	gins2 (ENSOJAG00000010199) #17	emc8 (ENSOJAG00000010160) #18	cox4i1 (ENSOJAG00000010137) #19	dusp22a (ENSOJAG00000010032)	irf8 (ENSOJAG00000010003) #21	foxf1 (ENSOJAG00000009974) #22	mthfsd (ENSOJAG00000009948) #23	DBNDD1 (ENSOJAG00000009915)	ENSOJAG00000009478	def8 (ENSOJAG00000009072)	mc1r (ENSOJAG00000009037)	tcf25 (ENSOJAG00000007652)	cyba (ENSOJAG00000007462) #35	mvda (ENSOJAG00000007438) #36	pdcd5 (ENSOJAG00000007316)	uraha (ENSOJAG00000007300)	CLEC18A (ENSOJAG00000007233)	ENSOJAG00000007208	kif7 (ENSOJAG00000007070)	rhcgl1 (ENSOJAG00000006079)	fes (ENSOJAG00000005660)
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000158881
Japanese Medaka HdrR	MODERN SPECIES	17	ENSORLG00000009654	ENSORLG00000026289	MAF (ENSORLG00000009643)	ENSORLG00000023512	CDYL2 (ENSORLG00000009635)	ENSORLG00000028792	cenpn (ENSORLG00000009577)	ATMIN (ENSORLG00000009553)	ENSORLG00000009546	gse1b (ENSORLG00000009542) #16	gins2 (ENSORLG00000009515) #17	emc8 (ENSORLG00000009505) #18	cox4i1 (ENSORLG00000026675) #19	dusp22a (ENSORLG00000027595)	irf8 (ENSORLG00000018216) #21	foxf1 (ENSORLG00000009476) #22	mthfsd (ENSORLG00000025578) #23	DBNDD1 (ENSORLG00000026883)	ENSORLG00000009456	def8 (ENSORLG00000009448)	mc1r (ENSORLG00000009400)	tcf25 (ENSORLG00000009390)	cyba (ENSORLG00000025140) #35	mvda (ENSORLG00000009351) #36	pdcd5 (ENSORLG00000009342)	uraha (ENSORLG00000009326)	CLEC18A (ENSORLG00000028024)	ENSORLG00000009318	kif7 (ENSORLG00000009302)	rhcga (ENSORLG00000009256)	fes (ENSORLG00000009210)
Chinese medaka	MODERN SPECIES	888	spon1a (ENSOSIG00000015176)	SYT9 (ENSOSIG00000016406)	ENSOSIG00000016407	MAF (ENSOSIG00000016409)	CDYL2 (ENSOSIG00000016419)	cmc2 (ENSOSIG00000016423)	ENSOSIG00000016427	ATMIN (ENSOSIG00000016429)	ENSOSIG00000016431	gse1b (ENSOSIG00000016453) #16	gins2 (ENSOSIG00000016671) #17	emc8 (ENSOSIG00000016674) #18	cox4i1 (ENSOSIG00000016679) #19	dusp22a (ENSOSIG00000016683)	irf8 (ENSOSIG00000016738) #21	foxf1 (ENSOSIG00000016744) #22	mthfsd (ENSOSIG00000016746) #23	DBNDD1 (ENSOSIG00000016748)	ENSOSIG00000016805	def8 (ENSOSIG00000018393)	mc1r (ENSOSIG00000019258)	tcf25 (ENSOSIG00000019277)	cyba (ENSOSIG00000019280) #35	mvda (ENSOSIG00000019283) #36	ENSOSIG00000019347	ENSOSIG00000019351	kif7 (ENSOSIG00000019356)	rhcgl1 (ENSOSIG00000019405)	furina (ENSOSIG00000019708)	ENSOSIG00000019906	ENSOSIG00000019908
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Aplocheiloidei	ANCESTRAL SPECIES	16	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Turquoise killifish	MODERN SPECIES	1616	PPFIBP2 (ENSNFUG00015002269)	ENSNFUG00015002250	ENSNFUG00015002248	MAF (ENSNFUG00015002245)	ENSNFUG00015002242	ENSNFUG00015002235	ENSNFUG00015002232	GSE1 (ENSNFUG00015002205) #16	GINS2 (ENSNFUG00015002184) #17	EMC8 (ENSNFUG00015002169) #18	COX4I1 (ENSNFUG00015002159) #19	DUSP22A (ENSNFUG00015002141)	IRF8 (ENSNFUG00015002124) #21	ENSNFUG00015002119	ENSNFUG00015002115	foxf1 (ENSNFUG00015002113) #22	MTHFSD (ENSNFUG00015002091) #23	ENSNFUG00015002077	DBNDD1 (ENSNFUG00015002072)	ENSNFUG00015001920	ENSNFUG00015001831	DEF8 (ENSNFUG00015001767)	mc1r (ENSNFUG00015001733)	TCF25 (ENSNFUG00015001475)	CYBA (ENSNFUG00015001371) #35	mvda (ENSNFUG00015001364) #36	PDCD5 (ENSNFUG00015001358)	uraha (ENSNFUG00015001355)	Nfu_g_1_003968 (ENSNFUG00015001352)	ENSNFUG00015001345	ENSNFUG00015001340
Mangrove rivulus	MODERN SPECIES	5	spon1a (ENSKMAG00000010630)	SYT9 (ENSKMAG00000010557)	PPFIBP2 (ENSKMAG00000010500)	MAF (ENSKMAG00000010484)	CDYL2 (ENSKMAG00000010456)	cmc2 (ENSKMAG00000010445)	cenpn (ENSKMAG00000010432)	ATMIN (ENSKMAG00000010415)	ENSKMAG00000010400	gse1b (ENSKMAG00000010204) #16	gins2 (ENSKMAG00000010131) #17	emc8 (ENSKMAG00000010107) #18	cox4i1 (ENSKMAG00000010092) #19	dusp22a (ENSKMAG00000010072)	irf8 (ENSKMAG00000010038) #21	foxf1 (ENSKMAG00000010016) #22	mthfsd (ENSKMAG00000009981) #23	DBNDD1 (ENSKMAG00000009962)	ENSKMAG00000009916	def8 (ENSKMAG00000009864)	mc1r (ENSKMAG00000009842)	tcf25 (ENSKMAG00000009818)	cyba (ENSKMAG00000009784) #35	mvda (ENSKMAG00000009765) #36	pdcd5 (ENSKMAG00000009714)	uraha (ENSKMAG00000009690)	ENSKMAG00000009678	CLEC18A (ENSKMAG00000009641)	ENSKMAG00000009602	kif7 (ENSKMAG00000009565)	rhcgl1 (ENSKMAG00000009447)
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b.c	ENSGT00970000193948	ENSGT00940000153229.A.a.a.b.d	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b.c	ENSGT00970000193948	ENSGT00940000153229.A.a.a.b.d	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b.c	ENSGT00940000153229.A.a.a.b.d	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011
NAME_6	ANCESTRAL SPECIES	5	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182.e	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b.c	ENSGT00940000153229.A.a.a.b.d	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749
Amazon molly	MODERN SPECIES	285	SYT9 (ENSPFOG00000017418)	PPFIBP2 (ENSPFOG00000017438)	MAF (ENSPFOG00000017458)	CDYL2 (ENSPFOG00000017464)	cmc2 (ENSPFOG00000017476)	cenpn (ENSPFOG00000017478)	ATMIN (ENSPFOG00000017492)	ENSPFOG00000020597	ENSPFOG00000017502	gse1b (ENSPFOG00000017513) #16	gins2 (ENSPFOG00000017593) #17	emc8 (ENSPFOG00000017609) #18	cox4i1 (ENSPFOG00000017618) #19	dusp22a (ENSPFOG00000017627)	irf8 (ENSPFOG00000017639) #21	foxf1 (ENSPFOG00000017654) #22	mthfsd (ENSPFOG00000017662) #23	DBNDD1 (ENSPFOG00000017690)	ENSPFOG00000017699	def8 (ENSPFOG00000017721)	DBNDD1 (ENSPFOG00000017736)	ENSPFOG00000017748	def8 (ENSPFOG00000024259)	mc1r (ENSPFOG00000020598)	tcf25 (ENSPFOG00000017797)	mvda (ENSPFOG00000017816) #36	pdcd5 (ENSPFOG00000017831)	uraha (ENSPFOG00000017832)	uraha (ENSPFOG00000017833)	ENSPFOG00000017836	CLEC18A (ENSPFOG00000017840)
Sailfin molly	MODERN SPECIES	447				CDYL2 (ENSPLAG00000002115)	cmc2 (ENSPLAG00000002107)	cenpn (ENSPLAG00000002101)	ATMIN (ENSPLAG00000002091)	ENSPLAG00000002089	gse1b (ENSPLAG00000002056) #16	gins2 (ENSPLAG00000002021) #17	emc8 (ENSPLAG00000002013) #18	cox4i1 (ENSPLAG00000002000) #19	dusp22a (ENSPLAG00000000737)	irf8 (ENSPLAG00000001967) #21	igfbp2a (ENSPLAG00000001953)	foxf1 (ENSPLAG00000001947) #22	mthfsd (ENSPLAG00000001935) #23	DBNDD1 (ENSPLAG00000001923)	ENSPLAG00000001913	def8 (ENSPLAG00000001902)	mc1r (ENSPLAG00000001890)	tcf25 (ENSPLAG00000001881)	cyba (ENSPLAG00000001869) #35	mvda (ENSPLAG00000001859) #36	pdcd5 (ENSPLAG00000001842)	ENSPLAG00000001834
Guppy	MODERN SPECIES	455	spon1a (ENSPREG00000013355)	SYT9 (ENSPREG00000013318)	PPFIBP2 (ENSPREG00000013251)	MAF (ENSPREG00000013215)	CDYL2 (ENSPREG00000013176)	cmc2 (ENSPREG00000013157)	cenpn (ENSPREG00000013147)	ATMIN (ENSPREG00000013131)	ENSPREG00000013110	gse1b (ENSPREG00000012934) #16	gins2 (ENSPREG00000012868) #17	emc8 (ENSPREG00000012849) #18	cox4i1 (ENSPREG00000012715) #19	dusp22a (ENSPREG00000012678)	irf8 (ENSPREG00000012647) #21	foxf1 (ENSPREG00000012626) #22	mthfsd (ENSPREG00000012611) #23	DBNDD1 (ENSPREG00000012597)	ENSPREG00000012576	zfand3 (ENSPREG00000012538)	SLC7A9 (ENSPREG00000012477)	RGS9BP (ENSPREG00000012431)	nudt19 (ENSPREG00000012419)	zdhhc7 (ENSPREG00000012380) #14	ENSPREG00000012342	nip7 (ENSPREG00000012323)	CDC42SE2 (ENSPREG00000012312)	ENSPREG00000012266	ENSPREG00000012227	ENSPREG00000012216	ENSPREG00000012212
Platyfish	MODERN SPECIES	18	SYT9 (ENSXMAG00000007022)	PPFIBP2 (ENSXMAG00000003151)	MAF (ENSXMAG00000021980)	ENSXMAG00000026596	CDYL2 (ENSXMAG00000003139)	cmc2 (ENSXMAG00000028753)	ENSXMAG00000003132	ATMIN (ENSXMAG00000003129)	ENSXMAG00000027834	gse1b (ENSXMAG00000024235) #16	gins2 (ENSXMAG00000003119) #17	emc8 (ENSXMAG00000003110) #18	cox4i1 (ENSXMAG00000003100) #19	dusp22a (ENSXMAG00000025179)	irf8 (ENSXMAG00000003082) #21	foxf1 (ENSXMAG00000003079) #22	mthfsd (ENSXMAG00000003067) #23	DBNDD1 (ENSXMAG00000003066)	ENSXMAG00000003041	def8 (ENSXMAG00000003027)	mc1r (ENSXMAG00000003026)	tcf25 (ENSXMAG00000003016)	cyba (ENSXMAG00000003013) #35	mvda (ENSXMAG00000003003) #36	pdcd5 (ENSXMAG00000002998)	uraha (ENSXMAG00000021019)	ENSXMAG00000025390	uraha (ENSXMAG00000029933)	ENSXMAG00000026606	ENSXMAG00000002987	ENSXMAG00000002983
NAME_4	ANCESTRAL SPECIES	53	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b.c	ENSGT00970000193948	ENSGT00940000153229.A.a.a.b.d	ENSGT00940000168437	ENSGT00940000165218.a	ENSGT00940000159749
Sheepshead minnow	MODERN SPECIES	117	spon1a (ENSCVAG00000019987)	SYT9 (ENSCVAG00000020030)	PPFIBP2 (ENSCVAG00000020050)	MAF (ENSCVAG00000020060)	CDYL2 (ENSCVAG00000020092)	cmc2 (ENSCVAG00000020107)	cenpn (ENSCVAG00000020116)	ATMIN (ENSCVAG00000020123)	ENSCVAG00000020138	gse1b (ENSCVAG00000020191) #16	gins2 (ENSCVAG00000020221) #17	emc8 (ENSCVAG00000020240) #18	cox4i1 (ENSCVAG00000020260) #19	dusp22a (ENSCVAG00000020286)	irf8 (ENSCVAG00000020325) #21	foxf1 (ENSCVAG00000020336) #22	mthfsd (ENSCVAG00000020354) #23	DBNDD1 (ENSCVAG00000020370)	ENSCVAG00000020413	def8 (ENSCVAG00000020423)	mc1r (ENSCVAG00000020436)	tcf25 (ENSCVAG00000020442)	cyba (ENSCVAG00000020518) #35	mvda (ENSCVAG00000020559) #36	pdcd5 (ENSCVAG00000020591)	uraha (ENSCVAG00000020596)	ENSCVAG00000020599	uraha (ENSCVAG00000020605)	ENSCVAG00000020612	ENSCVAG00000020624	kif7 (ENSCVAG00000020718)
Mummichog	MODERN SPECIES	692	spon1a (ENSFHEG00000020876)	SYT9 (ENSFHEG00000020908)	PPFIBP2 (ENSFHEG00000020934)	MAF (ENSFHEG00000020937)	CDYL2 (ENSFHEG00000020976)	cmc2 (ENSFHEG00000020988)	cenpn (ENSFHEG00000020994)	ATMIN (ENSFHEG00000020997)	ENSFHEG00000021010	gse1b (ENSFHEG00000021165) #16	gins2 (ENSFHEG00000021191) #17	emc8 (ENSFHEG00000021214) #18	cox4i1 (ENSFHEG00000021228) #19	dusp22a (ENSFHEG00000021234)	irf8 (ENSFHEG00000021238) #21	foxf1 (ENSFHEG00000021248) #22	mthfsd (ENSFHEG00000021266) #23	DBNDD1 (ENSFHEG00000021281)	ENSFHEG00000000525	def8 (ENSFHEG00000021316)	mc1r (ENSFHEG00000021344)	tcf25 (ENSFHEG00000021356)	cyba (ENSFHEG00000021377) #35	mvda (ENSFHEG00000021391) #36	pdcd5 (ENSFHEG00000021427)	ctsba (ENSFHEG00000021482)	ENSFHEG00000021502	ENSFHEG00000021508	sdr42e1 (ENSFHEG00000021521)	wtip (ENSFHEG00000021550)	gpib (ENSFHEG00000021750)
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Midas cichlid	MODERN SPECIES	313	ENSACIG00000005384	ENSACIG00000005349	MAF (ENSACIG00000005335)	CDYL2 (ENSACIG00000005321)	cmc2 (ENSACIG00000005313)	cenpn (ENSACIG00000005286)	ATMIN (ENSACIG00000005269)	ENSACIG00000005261	ENSACIG00000005254	gse1b (ENSACIG00000005165) #16	gins2 (ENSACIG00000005143) #17	emc8 (ENSACIG00000005128) #18	cox4i1 (ENSACIG00000005112) #19	dusp22a (ENSACIG00000005055)	irf8 (ENSACIG00000004583) #21	foxf1 (ENSACIG00000004559) #22	mthfsd (ENSACIG00000004537) #23	DBNDD1 (ENSACIG00000004528)	ENSACIG00000004481	def8 (ENSACIG00000004450)	mc1r (ENSACIG00000004441)	tcf25 (ENSACIG00000004382)	cyba (ENSACIG00000004358) #35	mvda (ENSACIG00000004229) #36	pdcd5 (ENSACIG00000004205)	uraha (ENSACIG00000004168)	CLEC18A (ENSACIG00000004121)	ENSACIG00000004098	ENSACIG00000004092	kif7 (ENSACIG00000003978)	rhcgl1 (ENSACIG00000003936)
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730.a.a #23	ENSGT00390000011730.b #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730.b #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
P. nyererei	MODERN SPECIES	686											gins2 (ENSPNYG00000016434) #17	emc8 (ENSPNYG00000016419) #18	cox4i1 (ENSPNYG00000016410) #19	dusp22a (ENSPNYG00000016400)	irf8 (ENSPNYG00000016377) #21	foxf1 (ENSPNYG00000016355) #22	mthfsd (ENSPNYG00000016325) #23	DBNDD1 (ENSPNYG00000016305)	ENSPNYG00000016226	def8 (ENSPNYG00000016149)	mc1r (ENSPNYG00000016107)	tcf25 (ENSPNYG00000016089)	cyba (ENSPNYG00000016066) #35	mvda (ENSPNYG00000016042) #36	pdcd5 (ENSPNYG00000016018)	uraha (ENSPNYG00000016012)	CLEC18A (ENSPNYG00000015981)	ENSPNYG00000015958	ENSPNYG00000015947	kif7 (ENSPNYG00000015927)
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730.b #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Eastern happy	MODERN SPECIES		SYT9 (ENSACLG00000007253)	PPFIBP2 (ENSACLG00000007184)	MAF (ENSACLG00000007176)	rpl30 (ENSACLG00000007160)	CDYL2 (ENSACLG00000007151)	cmc2 (ENSACLG00000006734)	cenpn (ENSACLG00000006724)	ATMIN (ENSACLG00000006720)	ENSACLG00000006716	gse1b (ENSACLG00000006689) #16	gins2 (ENSACLG00000006665) #17	emc8 (ENSACLG00000006655) #18	cox4i1 (ENSACLG00000006264) #19	dusp22a (ENSACLG00000006240)	irf8 (ENSACLG00000006208) #21	foxf1 (ENSACLG00000006199) #22	mthfsd (ENSACLG00000006177) #23	ENSACLG00000006174	DBNDD1 (ENSACLG00000006167)	ENSACLG00000006151	def8 (ENSACLG00000006040)	mc1r (ENSACLG00000006015)	tcf25 (ENSACLG00000005982)	cyba (ENSACLG00000005951) #35	mvda (ENSACLG00000005929) #36	pdcd5 (ENSACLG00000005899)	uraha (ENSACLG00000005892)	ENSACLG00000005889	CLEC18A (ENSACLG00000005290)	ENSACLG00000005278	ENSACLG00000005272
Zebra mbuna	MODERN SPECIES	1091	SYT9 (ENSMZEG00005012208)	PPFIBP2 (ENSMZEG00005012230)	MAF (ENSMZEG00005012264)	ENSMZEG00005012272	CDYL2 (ENSMZEG00005012284)	cmc2 (ENSMZEG00005012293)	cenpn (ENSMZEG00005012304)	ATMIN (ENSMZEG00005012313)	ENSMZEG00005012322	gse1b (ENSMZEG00005012345) #16	gins2 (ENSMZEG00005012396) #17	emc8 (ENSMZEG00005012413) #18	cox4i1 (ENSMZEG00005012428) #19	dusp22a (ENSMZEG00005012452)	irf8 (ENSMZEG00005012469) #21	foxf1 (ENSMZEG00005012491) #22	mthfsd (ENSMZEG00005012498) #23	DBNDD1 (ENSMZEG00005012511)	ENSMZEG00005012522	def8 (ENSMZEG00005012548)	mc1r (ENSMZEG00005012573)	tcf25 (ENSMZEG00005012587)	cyba (ENSMZEG00005012611) #35	mvda (ENSMZEG00005012684) #36	pdcd5 (ENSMZEG00005012704)	uraha (ENSMZEG00005012713)	ENSMZEG00005012726	CLEC18A (ENSMZEG00005012744)	ENSMZEG00005012761	kif7 (ENSMZEG00005012777)	ENSMZEG00005012795
Burton s mouthbrooder	MODERN SPECIES	278	spon1a (ENSHBUG00000016418)	SYT9 (ENSHBUG00000016364)	PPFIBP2 (ENSHBUG00000016313)	MAF (ENSHBUG00000016288)	CDYL2 (ENSHBUG00000016282)	cmc2 (ENSHBUG00000016271)	cenpn (ENSHBUG00000016262)	ATMIN (ENSHBUG00000016255)	ENSHBUG00000016242	gse1b (ENSHBUG00000016230) #16	gins2 (ENSHBUG00000016136) #17	emc8 (ENSHBUG00000016112) #18	cox4i1 (ENSHBUG00000016090) #19	dusp22a (ENSHBUG00000016085)	irf8 (ENSHBUG00000016070) #21	foxf1 (ENSHBUG00000016014) #22	mthfsd (ENSHBUG00000016009) #23	ENSHBUG00000015999 #23	DBNDD1 (ENSHBUG00000015989)	ENSHBUG00000015972	def8 (ENSHBUG00000015914)	mc1r (ENSHBUG00000015850)	tcf25 (ENSHBUG00000000898)	cyba (ENSHBUG00000015829) #35	mvda (ENSHBUG00000015796) #36	pdcd5 (ENSHBUG00000015775)	uraha (ENSHBUG00000015750)	ENSHBUG00000015739	CLEC18A (ENSHBUG00000015722)	ENSHBUG00000015708	kif7 (ENSHBUG00000015697)
Lyretail cichlid	MODERN SPECIES	290	SYT9 (ENSNBRG00000007601)	ENSNBRG00000007625	ENSNBRG00000007652	MAF (ENSNBRG00000007685)	CDYL2 (ENSNBRG00000007702)	cmc2 (ENSNBRG00000007714)	cenpn (ENSNBRG00000007732)	ATMIN (ENSNBRG00000007768)	ENSNBRG00000007787	gse1b (ENSNBRG00000007827) #16	gins2 (ENSNBRG00000007893) #17	emc8 (ENSNBRG00000007960) #18	cox4i1 (ENSNBRG00000007985) #19	dusp22a (ENSNBRG00000008001)	irf8 (ENSNBRG00000008014) #21	foxf1 (ENSNBRG00000008052) #22	mthfsd (ENSNBRG00000008068) #23	DBNDD1 (ENSNBRG00000008116)	ENSNBRG00000008141	def8 (ENSNBRG00000008186)	mc1r (ENSNBRG00000008217)	tcf25 (ENSNBRG00000008266)	cyba (ENSNBRG00000008290) #35	mvda (ENSNBRG00000008322) #36	pdcd5 (ENSNBRG00000008360)	uraha (ENSNBRG00000008385)	CLEC18A (ENSNBRG00000008398)	ENSNBRG00000008448	kif7 (ENSNBRG00000008500)	ENSNBRG00000008615	rhcgl1 (ENSNBRG00000008676)
Nile tilapia	MODERN SPECIES		spon1a (ENSONIG00000005578)	SYT9 (ENSONIG00000005585)	PPFIBP2 (ENSONIG00000005589)	MAF (ENSONIG00000005596)	CDYL2 (ENSONIG00000005598)	cmc2 (ENSONIG00000035642)	cenpn (ENSONIG00000005603)	atmin (ENSONIG00000032684)	ENSONIG00000021392	gse1b (ENSONIG00000005611) #16	gins2 (ENSONIG00000005614) #17	emc8 (ENSONIG00000005616) #18	cox4i1 (ENSONIG00000005620) #19	dusp22a (ENSONIG00000037181)	irf8 (ENSONIG00000005631) #21	foxf1 (ENSONIG00000005638) #22	mthfsd (ENSONIG00000005640) #23	DBNDD1 (ENSONIG00000005641)	ENSONIG00000005642	def8 (ENSONIG00000005645)	mc1r (ENSONIG00000021393)	ENSONIG00000037012	tcf25 (ENSONIG00000005649)	ENSONIG00000042033	ENSONIG00000042176	CYBA (ENSONIG00000005654) #35	mvda (ENSONIG00000005658) #36	pdcd5 (ENSONIG00000005662)	uraha (ENSONIG00000030759)	ENSONIG00000041611	CLEC18A (ENSONIG00000005669)
Pomacentridae	ANCESTRAL SPECIES	49	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00940000177011
Pomacentridae_A	ANCESTRAL SPECIES	47	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00940000177011
Amphiprion	ANCESTRAL SPECIES	198												ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00940000177011
Orange clownfish	MODERN SPECIES		cmtr2 (ENSAPEG00000013930)	calb2b (ENSAPEG00000013952)	got2b (ENSAPEG00000014014)	ENSAPEG00000014050	slc38a7 (ENSAPEG00000014082)	si:ch211-122f10.4 (ENSAPEG00000014145)	ENSAPEG00000014161	ENSAPEG00000014173	furina (ENSAPEG00000014251)	fes (ENSAPEG00000014314)	rhcgl1 (ENSAPEG00000014432)	emc8 (ENSAPEG00000014469) #18	cox4i1 (ENSAPEG00000014489) #19	dusp22a (ENSAPEG00000014506)	irf8 (ENSAPEG00000014533) #21	foxf1 (ENSAPEG00000014549) #22	mthfsd (ENSAPEG00000014567) #23	DBNDD1 (ENSAPEG00000014651)	ENSAPEG00000014661	def8 (ENSAPEG00000014688)	tcf25 (ENSAPEG00000014742)	mc1r (ENSAPEG00000014793)	cyba (ENSAPEG00000014811) #35	mvda (ENSAPEG00000014842) #36	pdcd5 (ENSAPEG00000014884)	uraha (ENSAPEG00000014908)	ENSAPEG00000014918	CLEC18A (ENSAPEG00000014939)	ENSAPEG00000014993	kif7 (ENSAPEG00000015040)	ENSAPEG00000015058
Clown anemonefish	MODERN SPECIES	1627												emc8 (ENSAOCG00000004689) #18	cox4i1 (ENSAOCG00000004671) #19	dusp22a (ENSAOCG00000004663)	irf8 (ENSAOCG00000004648) #21	foxf1 (ENSAOCG00000004636) #22	mthfsd (ENSAOCG00000004631) #23	DBNDD1 (ENSAOCG00000004629)	ENSAOCG00000004615	def8 (ENSAOCG00000004594)	mc1r (ENSAOCG00000004549)	tcf25 (ENSAOCG00000004536)	cyba (ENSAOCG00000004512) #35	mvda (ENSAOCG00000004494) #36	pdcd5 (ENSAOCG00000004483)	uraha (ENSAOCG00000004466)	ENSAOCG00000004462	CLEC18A (ENSAOCG00000004443)	ENSAOCG00000004429	kif7 (ENSAOCG00000001856)	ENSAOCG00000002564
Spiny chromis	MODERN SPECIES	82	SYT9 (ENSAPOG00000013864)	ENSAPOG00000013824	ENSAPOG00000013792	MAF (ENSAPOG00000013747)	CDYL2 (ENSAPOG00000013735)	cmc2 (ENSAPOG00000013686)	cenpn (ENSAPOG00000013671)	ATMIN (ENSAPOG00000013667)	ENSAPOG00000013658	gse1b (ENSAPOG00000013631) #16	gins2 (ENSAPOG00000013518) #17	emc8 (ENSAPOG00000013492) #18	cox4i1 (ENSAPOG00000013449) #19	dusp22a (ENSAPOG00000013411)	irf8 (ENSAPOG00000013360) #21	foxf1 (ENSAPOG00000013244) #22	mthfsd (ENSAPOG00000000770) #23	DBNDD1 (ENSAPOG00000013203)	ENSAPOG00000013193	def8 (ENSAPOG00000013171)	mc1r (ENSAPOG00000013122)	tcf25 (ENSAPOG00000013074)	cyba (ENSAPOG00000013048) #35	mvda (ENSAPOG00000013038) #36	pdcd5 (ENSAPOG00000012987)	uraha (ENSAPOG00000012938)
Bicolor damselfish	MODERN SPECIES	2655																foxf1 (ENSSPAG00000012835) #22	mthfsd (ENSSPAG00000012823) #23	DBNDD1 (ENSSPAG00000012801)
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Turbot	MODERN SPECIES	17	spon1a (ENSSMAG00000001982)	ENSSMAG00000001973	ENSSMAG00000001882	ENSSMAG00000001864	ENSSMAG00000001851	ENSSMAG00000001837	cenpn (ENSSMAG00000001825)	ENSSMAG00000001821	ENSSMAG00000001810	gse1b (ENSSMAG00000001629) #16	gins2 (ENSSMAG00000024847) #17	emc8 (ENSSMAG00000001580) #18	cox4i1 (ENSSMAG00000001565) #19	dusp22a (ENSSMAG00000001514)	IRF8 (ENSSMAG00000001479) #21	foxf1 (ENSSMAG00000001470) #22	MTHFSD (ENSSMAG00000001455) #23	DBNDD1 (ENSSMAG00000024394)	ENSSMAG00000001420	DEF8 (ENSSMAG00000001350)	MC1R (ENSSMAG00000001276)	tcf25 (ENSSMAG00000001248)	ENSSMAG00000001094 #35	mvda (ENSSMAG00000001078) #36	ENSSMAG00000001058	ENSSMAG00000001038	ENSSMAG00000001025	ENSSMAG00000000992	ENSSMAG00000000988	ENSSMAG00000000973	kif7 (ENSSMAG00000000961)
Tongue sole	MODERN SPECIES	15	dusp22a (ENSCSEG00000014548)	cox4i1 (ENSCSEG00000014570) #19	emc8 (ENSCSEG00000014587) #18	gins2 (ENSCSEG00000014601) #17	gse1b (ENSCSEG00000014621) #16	ENSCSEG00000014689	ATMIN (ENSCSEG00000014693)	cenpn (ENSCSEG00000014700)	cmc2 (ENSCSEG00000014703)	CDYL2 (ENSCSEG00000014709)	MAF (ENSCSEG00000014730)	ENSCSEG00000014739	ENSCSEG00000014751	SYT9 (ENSCSEG00000014769)	spon1a (ENSCSEG00000014787)	foxf1 (ENSCSEG00000014822) #22	mthfsd (ENSCSEG00000014829) #23	DBNDD1 (ENSCSEG00000014840)	def8 (ENSCSEG00000014854)	mc1r (ENSCSEG00000007004)	tcf25 (ENSCSEG00000007012)	cyba (ENSCSEG00000007093) #35	mvda (ENSCSEG00000007104) #36	pdcd5 (ENSCSEG00000007125)	uraha (ENSCSEG00000007147)	ENSCSEG00000007154	ENSCSEG00000007162	kif7 (ENSCSEG00000007174)	ENSCSEG00000007218	uqcrfs1 (ENSCSEG00000007221)	uqcrfs1 (ENSCSEG00000007223)
Carangaria_A	ANCESTRAL SPECIES	20	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Barramundi perch	MODERN SPECIES	107	spon1a (ENSLCAG00010004082)	SYT9 (ENSLCAG00010004031)	PPFIBP2 (ENSLCAG00010003923)	MAF (ENSLCAG00010003892)	CDYL2 (ENSLCAG00010003889)	cmc2 (ENSLCAG00010003885)	cenpn (ENSLCAG00010003881)	ATMIN (ENSLCAG00010003877)	ENSLCAG00010003871	gse1b (ENSLCAG00010003839) #16	gins2 (ENSLCAG00010003821) #17	emc8 (ENSLCAG00010003815) #18	cox4i1 (ENSLCAG00010003814) #19	dusp22a (ENSLCAG00010003808)	irf8 (ENSLCAG00010003800) #21	foxf1 (ENSLCAG00010003793) #22	mthfsd (ENSLCAG00010003788) #23	DBNDD1 (ENSLCAG00010003784)	ENSLCAG00010003616	def8 (ENSLCAG00010003505)	mc1r (ENSLCAG00010003451)	tcf25 (ENSLCAG00010003246)	cyba (ENSLCAG00010003195) #35	mvda (ENSLCAG00010003166) #36	pdcd5 (ENSLCAG00010003149)	uraha (ENSLCAG00010003141)	ENSLCAG00010003138	CLEC18A (ENSLCAG00010003135)	ENSLCAG00010003130	ENSLCAG00010003125	kif7 (ENSLCAG00010003113)
Seriola	ANCESTRAL SPECIES	13	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Greater amberjack	MODERN SPECIES	1	ENSSDUG00000020333	spon1a (ENSSDUG00000020296)	SYT9 (ENSSDUG00000020276)	PPFIBP2 (ENSSDUG00000020253)	MAF (ENSSDUG00000020239)	CDYL2 (ENSSDUG00000020205)	cmc2 (ENSSDUG00000020194)	cenpn (ENSSDUG00000020184)	ATMIN (ENSSDUG00000020177)	ENSSDUG00000020171	gse1b (ENSSDUG00000020065) #16	gins2 (ENSSDUG00000020039) #17	emc8 (ENSSDUG00000020029) #18	cox4i1 (ENSSDUG00000020018) #19	irf8 (ENSSDUG00000019993) #21	foxf1 (ENSSDUG00000019983) #22	mthfsd (ENSSDUG00000019966) #23	DBNDD1 (ENSSDUG00000019958)	ENSSDUG00000019936	def8 (ENSSDUG00000019902)	mc1r (ENSSDUG00000019897)	tcf25 (ENSSDUG00000019877)	cyba (ENSSDUG00000019861) #35	mvda (ENSSDUG00000019835) #36	pdcd5 (ENSSDUG00000019819)	ENSSDUG00000019813	uraha (ENSSDUG00000019806)	ENSSDUG00000019797	CLEC18A (ENSSDUG00000019779)	ENSSDUG00000019757	ENSSDUG00000019747
Yellowtail amberjack	MODERN SPECIES	3255		SYT9 (ENSSLDG00000019722)	PPFIBP2 (ENSSLDG00000019671)	MAF (ENSSLDG00000019657)	CDYL2 (ENSSLDG00000019641)	cmc2 (ENSSLDG00000019629)	cenpn (ENSSLDG00000019621)	ATMIN (ENSSLDG00000019609)	ENSSLDG00000019599	gse1b (ENSSLDG00000019549) #16	gins2 (ENSSLDG00000019537) #17	emc8 (ENSSLDG00000019518) #18	cox4i1 (ENSSLDG00000019494) #19	dusp22a (ENSSLDG00000019478)	irf8 (ENSSLDG00000019463) #21	foxf1 (ENSSLDG00000019451) #22	mthfsd (ENSSLDG00000019413) #23	DBNDD1 (ENSSLDG00000019400)	ENSSLDG00000019377	def8 (ENSSLDG00000019353)	mc1r (ENSSLDG00000019348)	tcf25 (ENSSLDG00000019326)	cyba (ENSSLDG00000019308) #35	mvda (ENSSLDG00000019277) #36	pdcd5 (ENSSLDG00000019261)	uraha (ENSSLDG00000019249)	ENSSLDG00000019235	CLEC18A (ENSSLDG00000019219)	ENSSLDG00000019203	ENSSLDG00000019198	kif7 (ENSSLDG00000019100)
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000026817	ENSMAMG00000020516	ENSMAMG00000020532	ENSMAMG00000020542	ENSMAMG00000020553	cmc2 (ENSMAMG00000020557)	cenpn (ENSMAMG00000020559)	ATMIN (ENSMAMG00000020562)	ENSMAMG00000020567	gse1b (ENSMAMG00000020574) #16	gins2 (ENSMAMG00000020603) #17	emc8 (ENSMAMG00000027341) #18	cox4i1 (ENSMAMG00000020621) #19	dusp22a (ENSMAMG00000020627)	irf8 (ENSMAMG00000020632) #21	foxf1 (ENSMAMG00000020639) #22	MTHFSD (ENSMAMG00000020645) #23	DBNDD1 (ENSMAMG00000020653)	ENSMAMG00000020656	DEF8 (ENSMAMG00000020658)	MC1R (ENSMAMG00000020664)	tcf25 (ENSMAMG00000020668)	ENSMAMG00000025710 #35	mvda (ENSMAMG00000020684) #36	ENSMAMG00000020692	ENSMAMG00000020694	ENSMAMG00000020696	ENSMAMG00000020701	ENSMAMG00000020705	ENSMAMG00000020711	ENSMAMG00000028160
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00940000177011
Climbing perch	MODERN SPECIES	16	spon1a (ENSATEG00000000456)	ENSATEG00000000520	ENSATEG00000028145	ENSATEG00000000651	ENSATEG00000000664	cmc2 (ENSATEG00000000716)	cenpn (ENSATEG00000000720)	ATMIN (ENSATEG00000026624)	ENSATEG00000025166	gse1b (ENSATEG00000000761) #16	gins2 (ENSATEG00000000892) #17	emc8 (ENSATEG00000027409) #18	cox4i1 (ENSATEG00000000933) #19	dusp22a (ENSATEG00000029652)	irf8 (ENSATEG00000000971) #21	foxf1 (ENSATEG00000001013) #22	MTHFSD (ENSATEG00000001024) #23	DBNDD1 (ENSATEG00000027825)	ENSATEG00000001080	DEF8 (ENSATEG00000001092)	MC1R (ENSATEG00000001166)	tcf25 (ENSATEG00000001124)	ENSATEG00000001175 #35	mvda (ENSATEG00000001183) #36	ENSATEG00000001217	ENSATEG00000001250	ENSATEG00000001265	ENSATEG00000001269	ENSATEG00000001305	kif7 (ENSATEG00000001313)	rhcga (ENSATEG00000001327)
Siamese fighting fish	MODERN SPECIES	14	spon1a (ENSBSLG00000021854)	SYT9 (ENSBSLG00000022233)	PPFIBP2 (ENSBSLG00000022250)	MAF (ENSBSLG00000022278)	CDYL2 (ENSBSLG00000022316)	ENSBSLG00000022335	cenpn (ENSBSLG00000022361)	ATMIN (ENSBSLG00000022410)	ENSBSLG00000022423	gse1b (ENSBSLG00000022436) #16	gins2 (ENSBSLG00000022479) #17	emc8 (ENSBSLG00000022492) #18	cox4i1 (ENSBSLG00000022498) #19	dusp22a (ENSBSLG00000000388)	irf8 (ENSBSLG00000000402) #21	foxf1 (ENSBSLG00000000418) #22	mthfsd (ENSBSLG00000000430) #23	DBNDD1 (ENSBSLG00000000441)	ENSBSLG00000000464	def8 (ENSBSLG00000000615)	mc1r (ENSBSLG00000000703)	tcf25 (ENSBSLG00000000773)	cyba (ENSBSLG00000000899) #35	mvda (ENSBSLG00000000906) #36	pdcd5 (ENSBSLG00000000929)	uraha (ENSBSLG00000000931)	ENSBSLG00000000933	CLEC18A (ENSBSLG00000001211)	ENSBSLG00000001230	kif7 (ENSBSLG00000001372)	ENSBSLG00000001529
Eupercaria	ANCESTRAL SPECIES	14	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00530000067249	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00940000172336	ENSGT00940000165218.a	ENSGT00940000159749	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000157220.a
Fugu	MODERN SPECIES	4	spon1a (ENSTRUG00000003204)	SYT9 (ENSTRUG00000008469)	PPFIBP2 (ENSTRUG00000018289)	MAF (ENSTRUG00000018285)	CDYL2 (ENSTRUG00000018265)	cmc2 (ENSTRUG00000018261)	cenpn (ENSTRUG00000025592)	ATMIN (ENSTRUG00000018258)	ENSTRUG00000025608	gse1b (ENSTRUG00000018255) #16	gins2 (ENSTRUG00000021790) #17	emc8 (ENSTRUG00000018249) #18	cox4i1 (ENSTRUG00000018241) #19	dusp22a (ENSTRUG00000018237)	irf8 (ENSTRUG00000018213) #21	foxf1 (ENSTRUG00000032426) #22	MTHFSD (ENSTRUG00000025457) #23	DBNDD1 (ENSTRUG00000018202)	def8 (ENSTRUG00000018196)	mc1r (ENSTRUG00000018192)	tcf25 (ENSTRUG00000018187)	p22phox (ENSTRUG00000018180) #35	mvda (ENSTRUG00000018170) #36	pdcd5 (ENSTRUG00000018158)	uraha (ENSTRUG00000019943)	ENSTRUG00000029263	ENSTRUG00000018145	ENSTRUG00000018139	kif7 (ENSTRUG00000018115)	rhcg2 (ENSTRUG00000018092)	ENSTRUG00000018073
Tetraodon	MODERN SPECIES	20	spon1a (ENSTNIG00000013814)	SYT9 (ENSTNIG00000013815)	ENSTNIG00000013816	MAF (ENSTNIG00000005526)	CDYL2 (ENSTNIG00000009276)	cmc2 (ENSTNIG00000000544)	cenpn (ENSTNIG00000000860)	ATMIN (ENSTNIG00000009277)	ENSTNIG00000000138	ENSTNIG00000009278	gse1b (ENSTNIG00000009279) #16	gins2 (ENSTNIG00000009280) #17	emc8 (ENSTNIG00000009281) #18	dusp22a (ENSTNIG00000009282)	irf8 (ENSTNIG00000009283) #21	foxf1 (ENSTNIG00000009284) #22	mthfsd (ENSTNIG00000009285) #23	DBNDD1 (ENSTNIG00000009286)	def8 (ENSTNIG00000009287)	mc1r (ENSTNIG00000009288)	tcf25 (ENSTNIG00000009289)	cyba (ENSTNIG00000009290) #35	mvda (ENSTNIG00000009291) #36	pdcd5 (ENSTNIG00000009292)	uraha (ENSTNIG00000000957)	ENSTNIG00000009293	kif7 (ENSTNIG00000009294)	RHCG (ENSTNIG00000009295)	ENSTNIG00000009296	furina (ENSTNIG00000009297)	ENSTNIG00000009298
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Ballan wrasse	MODERN SPECIES		supv3l1 (ENSLBEG00000009091)	hkdc1 (ENSLBEG00000009049)	HK1 (ENSLBEG00000008960)	tacr2 (ENSLBEG00000008913)	tspan15 (ENSLBEG00000008882)	ENSLBEG00000008850	ENSLBEG00000008812	PBLD (ENSLBEG00000008766)	HNRNPH3 (ENSLBEG00000008709)	rufy2 (ENSLBEG00000008625)	ENSLBEG00000008583	fam120b (ENSLBEG00000008513)	dld (ENSLBEG00000008425)	mis12 (ENSLBEG00000008378)	ppm1g (ENSLBEG00000008252)	foxf1 (ENSLBEG00000008223) #22	mthfsd (ENSLBEG00000008132) #23	DBNDD1 (ENSLBEG00000008080)	ENSLBEG00000008056	def8 (ENSLBEG00000007992)	mc1r (ENSLBEG00000007944)	tcf25 (ENSLBEG00000007911)	cyba (ENSLBEG00000007737) #35	mvda (ENSLBEG00000007682) #36	pdcd5 (ENSLBEG00000007622)	ENSLBEG00000007566	uraha (ENSLBEG00000007545)	ENSLBEG00000007527	ENSLBEG00000007491	ENSLBEG00000007450	ENSLBEG00000007423
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Perciformes	ANCESTRAL SPECIES	15	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Lumpfish	MODERN SPECIES	18	spon1a (ENSCLMG00005001862)	SYT9 (ENSCLMG00005001827)	PPFIBP2 (ENSCLMG00005000991)	MAF (ENSCLMG00005000983)	CDYL2 (ENSCLMG00005000980)	ENSCLMG00005000979	cenpn (ENSCLMG00005000973)	ATMIN (ENSCLMG00005000971)	ENSCLMG00005000968	gse1b (ENSCLMG00005000959) #16	gins2 (ENSCLMG00005000951) #17	emc8 (ENSCLMG00005000947) #18	cox4i1 (ENSCLMG00005000942) #19	dusp22a (ENSCLMG00005000939)	irf8 (ENSCLMG00005000936) #21	foxf1 (ENSCLMG00005000934) #22	mthfsd (ENSCLMG00005000933) #23	DBNDD1 (ENSCLMG00005000931)	ENSCLMG00005000268	def8 (ENSCLMG00005000142)	mc1r (ENSCLMG00005000107)	tcf25 (ENSCLMG00005000073)	tcf25 (ENSCLMG00005000046)	cyba (ENSCLMG00005000039) #35	mvda (ENSCLMG00005000036) #36	pdcd5 (ENSCLMG00005000026)	uraha (ENSCLMG00005000019)	ENSCLMG00005000016	ENSCLMG00005000013	ENSCLMG00005000003	ENSCLMG00005022727
Stickleback	MODERN SPECIES	1	spon1a (ENSGACG00000015990)	SYT9 (ENSGACG00000015987)	PPFIBP2 (ENSGACG00000015982)	MAF (ENSGACG00000015980)	CDYL2 (ENSGACG00000015978)	cmc2 (ENSGACG00000015977)	cenpn (ENSGACG00000015976)	ATMIN (ENSGACG00000015975)	ENSGACG00000015973	gse1b (ENSGACG00000015970) #16	gins2 (ENSGACG00000015967) #17	emc8 (ENSGACG00000015965) #18	cox4i1 (ENSGACG00000015963) #19	dusp22a (ENSGACG00000015961)	irf8 (ENSGACG00000015958) #21	foxf1 (ENSGACG00000015956) #22	mthfsd (ENSGACG00000015955) #23	DBNDD1 (ENSGACG00000015954)	def8 (ENSGACG00000015953)	mc1r (ENSGACG00000015952)	tcf25 (ENSGACG00000015948)	cyba (ENSGACG00000015943) #35	mvda (ENSGACG00000015940) #36	pdcd5 (ENSGACG00000015937)	uraha (ENSGACG00000015936)	ENSGACG00000015935	CLEC18A (ENSGACG00000015933)	ENSGACG00000015931	kif7 (ENSGACG00000015929)	rhcga (ENSGACG00000015923)	fes (ENSGACG00000015919)
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.h	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Channel bull blenny	MODERN SPECIES	17	ENSCGOG00000021016	SYT9 (ENSCGOG00000021015)	PPFIBP2 (ENSCGOG00000020761)	MAF (ENSCGOG00000020750)	ENSCGOG00000020746	CDYL2 (ENSCGOG00000020740)	cmc2 (ENSCGOG00000020736)	cenpn (ENSCGOG00000020733)	ATMIN (ENSCGOG00000020732)	ENSCGOG00000020730	gins2 (ENSCGOG00000020713) #17	emc8 (ENSCGOG00000020712) #18	cox4i1 (ENSCGOG00000020707) #19	dusp22a (ENSCGOG00000020701)	irf8 (ENSCGOG00000020665) #21	foxf1 (ENSCGOG00000020663) #22	mthfsd (ENSCGOG00000020659) #23	DBNDD1 (ENSCGOG00000020656)	ENSCGOG00000020399	def8 (ENSCGOG00000020277)	mc1r (ENSCGOG00000020267)	tcf25 (ENSCGOG00000020200)	cyba (ENSCGOG00000020130) #35	mvda (ENSCGOG00000020043) #36	pdcd5 (ENSCGOG00000020031)	fut7 (ENSCGOG00000020027)	uraha (ENSCGOG00000020023)	ENSCGOG00000020020	ENSCGOG00000020018	ENSCGOG00000019997	ENSCGOG00000019996
Pike perch	MODERN SPECIES	29	spon1a (ENSSLUG00000012035)	SYT9 (ENSSLUG00000011988)	ENSSLUG00000011977	PPFIBP2 (ENSSLUG00000011972)	MAF (ENSSLUG00000011971)	CDYL2 (ENSSLUG00000011968)	cmc2 (ENSSLUG00000011964)	cenpn (ENSSLUG00000011960)	ATMIN (ENSSLUG00000011952)	ENSSLUG00000011947	gins2 (ENSSLUG00000011901) #17	emc8 (ENSSLUG00000011898) #18	cox4i1 (ENSSLUG00000011890) #19	dusp22a (ENSSLUG00000011880)	irf8 (ENSSLUG00000011865) #21	foxf1 (ENSSLUG00000011858) #22	mthfsd (ENSSLUG00000011853) #23	DBNDD1 (ENSSLUG00000011846)	ENSSLUG00000011822	def8 (ENSSLUG00000011594)	mc1r (ENSSLUG00000011569)	tcf25 (ENSSLUG00000010670)	cyba (ENSSLUG00000010608) #35	mvda (ENSSLUG00000010582) #36	pdcd5 (ENSSLUG00000010575)	uraha (ENSSLUG00000010567)	ENSSLUG00000010559	CLEC18A (ENSSLUG00000010532)	ENSSLUG00000010513	ENSSLUG00000010505	kif7 (ENSSLUG00000010329)
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000154910.b.b	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000006738.a #18	ENSGT00390000002407.d #19	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000155948.b.a	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000159646	ENSGT00390000016908	ENSGT00940000167952	ENSGT00390000004738	ENSGT00390000013091	ENSGT00940000161906	ENSGT00700000104539.b.a #16	ENSGT00390000007838 #17	ENSGT00390000002407.d #19	ENSGT00390000006738.a #18	ENSGT00940000164598	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00390000018903	ENSGT00940000160625.r.b	ENSGT00940000159182	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000002290 #35	ENSGT00390000015359 #36	ENSGT00390000011085	ENSGT00940000153229.A.a.a.b	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218.a	ENSGT00940000177011	ENSGT00940000159749
European seabass	MODERN SPECIES	18	KIAA1549L (ENSDLAG00005015824)	spon1a (ENSDLAG00005015885)	ENSDLAG00005016407	ENSDLAG00005016453	ENSDLAG00005027773	ENSDLAG00005032416	cmc2 (ENSDLAG00005030968)	ENSDLAG00005016805	ENSDLAG00005016811	gse1b (ENSDLAG00005016826) #16	gins2 (ENSDLAG00005016928) #17	cox4i1 (ENSDLAG00005016960) #19	emc8 (ENSDLAG00005028986) #18	dusp22a (ENSDLAG00005030446)	irf8 (ENSDLAG00005016984) #21	foxf1 (ENSDLAG00005017030) #22	MTHFSD (ENSDLAG00005027729) #23	DBNDD1 (ENSDLAG00005017096)	ENSDLAG00005017110	DEF8 (ENSDLAG00005017148)	MC1R (ENSDLAG00005017519)	tcf25 (ENSDLAG00005017532)	ENSDLAG00005026379 #35	mvda (ENSDLAG00005017626) #36	ENSDLAG00005031861	ENSDLAG00005028912	ENSDLAG00005008284	ENSDLAG00005008298	ENSDLAG00005002865	kif7 (ENSDLAG00005002502)	rhcga (ENSDLAG00005008312)
Large yellow croaker	MODERN SPECIES	480	hipk3b (ENSLCRG00005004657)	spon1a (ENSLCRG00005003595)	SYT9 (ENSLCRG00005003571)	PPFIBP2 (ENSLCRG00005001376)	MAF (ENSLCRG00005001355)	CDYL2 (ENSLCRG00005001354)	ENSLCRG00005001353	cenpn (ENSLCRG00005001349)	ATMIN (ENSLCRG00005001346)	ENSLCRG00005001345	gse1b (ENSLCRG00005001326) #16	gins2 (ENSLCRG00005001311) #17	emc8 (ENSLCRG00005001305) #18	dusp22a (ENSLCRG00005001298)	irf8 (ENSLCRG00005001294) #21	foxf1 (ENSLCRG00005001293) #22	mthfsd (ENSLCRG00005001289) #23	DBNDD1 (ENSLCRG00005001281)	ENSLCRG00005000376	def8 (ENSLCRG00005000290)	mc1r (ENSLCRG00005000275)	tcf25 (ENSLCRG00005000183)	cyba (ENSLCRG00005019724) #35	mvda (ENSLCRG00005019722) #36	uraha (ENSLCRG00005019719)	ENSLCRG00005019718	CLEC18A (ENSLCRG00005019716)	ENSLCRG00005019714	ENSLCRG00005019712	kif7 (ENSLCRG00005019682)	rhcgl1 (ENSLCRG00005018787)
Gilthead seabream	MODERN SPECIES	18	PPFIBP2 (ENSSAUG00010008841)	ENSSAUG00010008829	MAF (ENSSAUG00010008824)	ENSSAUG00010008820	CDYL2 (ENSSAUG00010008818)	cmc2 (ENSSAUG00010008816)	cenpn (ENSSAUG00010008814)	ATMIN (ENSSAUG00010008811)	PPP1R3E (ENSSAUG00010008806)	gse1b (ENSSAUG00010008797) #16	gins2 (ENSSAUG00010008796) #17	emc8 (ENSSAUG00010008795) #18	Cox4a (ENSSAUG00010008794) #19	dusp22a (ENSSAUG00010008790)	irf8 (ENSSAUG00010008763) #21	foxf1 (ENSSAUG00010008759) #22	mthfsd (ENSSAUG00010008756) #23	DBNDD1 (ENSSAUG00010008754)	ENSSAUG00010008701	def8 (ENSSAUG00010008686)	mc1r (ENSSAUG00010008684)	tcf25 (ENSSAUG00010008308)	cyba (ENSSAUG00010008288) #35	mvda (ENSSAUG00010008276) #36	pdcd5 (ENSSAUG00010008257)	uraha (ENSSAUG00010008254)	ENSSAUG00010008253	CLEC18A (ENSSAUG00010008252)	ENSSAUG00010008246	ENSSAUG00010008242	kif7 (ENSSAUG00010007666)
Tiger tail seahorse	MODERN SPECIES	461	spon1a (ENSHCOG00000015295)	SYT9 (ENSHCOG00000015317)	ENSHCOG00000015338	MAF (ENSHCOG00000015343)	CDYL2 (ENSHCOG00000015376)	cmc2 (ENSHCOG00000015383)	cenpn (ENSHCOG00000015408)	ATMIN (ENSHCOG00000015417)	ENSHCOG00000015429	gse1b (ENSHCOG00000000871) #16	gins2 (ENSHCOG00000015581) #17	emc8 (ENSHCOG00000015593) #18	cox4i1 (ENSHCOG00000000437) #19	dusp22a (ENSHCOG00000015624)	irf8 (ENSHCOG00000015649) #21	foxf1 (ENSHCOG00000015661) #22	mthfsd (ENSHCOG00000015682) #23	DBNDD1 (ENSHCOG00000015696)	ENSHCOG00000015723	def8 (ENSHCOG00000015726)	mc1r (ENSHCOG00000015736)	tcf25 (ENSHCOG00000015742)
Spotted gar	MODERN SPECIES	662	dynlrb2 (ENSLOCG00000000574)	CDYL2 (ENSLOCG00000000608)	cmc2 (ENSLOCG00000000647)	cenpn (ENSLOCG00000000681)	ATMIN (ENSLOCG00000000709)	ENSLOCG00000017583	ENSLOCG00000000764	CIBAR2 (ENSLOCG00000000792)	ENSLOCG00000000856	gse1b (ENSLOCG00000000905) #16	gins2 (ENSLOCG00000000923) #17	emc8 (ENSLOCG00000000943) #18	cox4i1 (ENSLOCG00000000961) #19	dusp22a (ENSLOCG00000000986)	irf8 (ENSLOCG00000001013) #21	foxf1 (ENSLOCG00000001042) #22	mthfsd (ENSLOCG00000001066) #23	gas8 (ENSLOCG00000001086)	DBNDD1 (ENSLOCG00000001107)	ENSLOCG00000001134	def8 (ENSLOCG00000001166)	TUBB3 (ENSLOCG00000001199)	mc1r (ENSLOCG00000001220)	tcf25 (ENSLOCG00000001236)	cyba (ENSLOCG00000001258) #35	mvda (ENSLOCG00000001275) #36	zdhhc7 (ENSLOCG00000001307) #14	TERF2 (ENSLOCG00000001317)	TMED6 (ENSLOCG00000001361)	nip7 (ENSLOCG00000001379)	cog8 (ENSLOCG00000001398)
Reedfish	MODERN SPECIES	17	WWOX (ENSECRG00000016879)	ENSECRG00000016916	dynlrb2 (ENSECRG00000016945)	CDYL2 (ENSECRG00000016973)	cmc2 (ENSECRG00000016991)	ENSECRG00000017010	ATMIN (ENSECRG00000017039)	ENSECRG00000017049	CIBAR2 (ENSECRG00000017068)	gse1b (ENSECRG00000017097) #16	gins2 (ENSECRG00000017174) #17	emc8 (ENSECRG00000017199) #18	cox4i1 (ENSECRG00000017215) #19	dusp22a (ENSECRG00000017235)	irf8 (ENSECRG00000017260) #21	foxf1 (ENSECRG00000017289) #22	mthfsd (ENSECRG00000017307) #23	ENSECRG00000017329	gas8 (ENSECRG00000017357)	DBNDD1 (ENSECRG00000017380)	ENSECRG00000017393	def8 (ENSECRG00000017457)	ENSECRG00000017564	mc1r (ENSECRG00000017598)	tcf25 (ENSECRG00000017680)	cyba (ENSECRG00000017862) #35	mvda (ENSECRG00000017900) #36	zdhhc7 (ENSECRG00000017932) #14	TERF2 (ENSECRG00000017960)	TMED6 (ENSECRG00000017994)	nip7 (ENSECRG00000018011)