Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000160275	ENSGT00940000158087 #7	ENSGT00390000012498 #8	ENSGT00940000157543 #9	ENSGT00550000074994 #10	ENSGT00940000157410 #11	ENSGT00940000156519 #12	ENSGT00390000009535 #13	ENSGT00390000010285.d #14	ENSGT00700000104539.b.a #15	ENSGT00390000007838 #16	ENSGT00390000015933 #17	ENSGT00390000006738.a #19	ENSGT00390000002407.d #20	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619 #24	ENSGT00940000162251 #25	ENSGT00390000003910 #26	ENSGT00390000001368 #27	ENSGT00940000154158.k.a #28	ENSGT00520000055637.A.b #29	ENSGT00940000158707.a.b #30	ENSGT00390000003374 #31	ENSGT00940000155581.C #32	ENSGT00940000162066 #33	ENSGT00390000011116 #34	ENSGT00530000065415	ENSGT00530000063823.b.a #35	ENSGT01100000263484.B.a
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000160275	ENSGT00940000158087 #7	ENSGT00390000012498 #8	ENSGT00940000157543 #9	ENSGT00550000074994 #10	ENSGT00940000157410 #11	ENSGT00940000156519 #12	ENSGT00390000009535 #13	ENSGT00390000010285.d #14	ENSGT00700000104539.b.a #15	ENSGT00390000007838 #16	ENSGT00390000015933 #17	ENSGT00390000006738.a #19	ENSGT00390000002407.d.w #20	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619 #24	ENSGT00940000162251 #25	ENSGT00390000003910 #26	ENSGT00390000001368 #27	ENSGT00940000154158.k.a #28	ENSGT00520000055637.A.b #29	ENSGT00940000158707.a.b #30	ENSGT00390000003374 #31	ENSGT00940000155581.C #32	ENSGT00940000162066 #33	ENSGT00390000011116 #34	ENSGT00530000065415	ENSGT00530000063823.b.a #35	ENSGT01100000263484.B.a
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000160275	ENSGT00940000158087 #7	ENSGT00390000012498 #8	ENSGT00940000157543 #9	ENSGT00550000074994.i #10	ENSGT00940000157410 #11	ENSGT00940000156519 #12	ENSGT00390000009535 #13	ENSGT00390000010285.d #14	ENSGT00700000104539.b.a #15	ENSGT00390000007838 #16	ENSGT00390000015933 #17	ENSGT00390000006738.a #19	ENSGT00390000002407.d.w #20	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619 #24	ENSGT00940000162251 #25	ENSGT00390000003910 #26	ENSGT00390000001368 #27	ENSGT00940000154158.k.a #28	ENSGT00520000055637.A.b #29	ENSGT00940000158707.a.b #30	ENSGT00390000003374 #31	ENSGT00940000155581.C #32	ENSGT00940000162066 #33	ENSGT00390000011116 #34	ENSGT00530000063823.b.a #35	ENSGT00730000111190.i #37	ENSGT00940000161887
Goat	MODERN SPECIES	9	MEAK7 (ENSCHIG00000022723) #7	COTL1 (ENSCHIG00000023708) #8	KLHL36 (ENSCHIG00000011329) #9	ENSCHIG00000025916 #10	CRISPLD2 (ENSCHIG00000024115) #11	ZDHHC7 (ENSCHIG00000009288) #12	KIAA0513 (ENSCHIG00000006583) #13	CIBAR2 (ENSCHIG00000015967) #14	GSE1 (ENSCHIG00000025163) #15	GINS2 (ENSCHIG00000016347) #16	C16orf74 (ENSCHIG00000021117) #17	ENSCHIG00000011295 #18	EMC8 (ENSCHIG00000020765) #19	ENSCHIG00000012976 #20	IRF8 (ENSCHIG00000027216) #21	FOXF1 (ENSCHIG00000018868) #22	MTHFSD (ENSCHIG00000010977) #23	FOXC2 (ENSCHIG00000024950) #24	FOXL1 (ENSCHIG00000003058) #25	ENSCHIG00000022152 #26	FBXO31 (ENSCHIG00000012761) #27	ENSCHIG00000026673 #28	ZCCHC14 (ENSCHIG00000016741) #29	JPH3 (ENSCHIG00000019663) #30	KLHDC4 (ENSCHIG00000009862) #31	SLC7A5 (ENSCHIG00000019849) #32	CA5A (ENSCHIG00000006073) #33	BANP (ENSCHIG00000014438) #34	ZFPM1 (ENSCHIG00000010239) #35	ENSCHIG00000019746 #36	ENSCHIG00000026768 #37
Rambouillet Sheep	MODERN SPECIES	5	MEAK7 (ENSOARG00020007766) #7	COTL1 (ENSOARG00020007806) #8	KLHL36 (ENSOARG00020007848) #9	USP10 (ENSOARG00020007922) #10	ENSOARG00020008204	CRISPLD2 (ENSOARG00020008254) #11	ZDHHC7 (ENSOARG00020008568) #12	KIAA0513 (ENSOARG00020008594) #13	CIBAR2 (ENSOARG00020008666) #14	GSE1 (ENSOARG00020008756) #15	GINS2 (ENSOARG00020009486) #16	C16orf74 (ENSOARG00020009512) #17	EMC8 (ENSOARG00020009578) #19	COX4I1 (ENSOARG00020009649) #20	IRF8 (ENSOARG00020009703) #21	FOXF1 (ENSOARG00020009818) #22	ENSOARG00020009849 #23	FOXC2 (ENSOARG00020010027) #24	FOXL1 (ENSOARG00020010056) #25	ENSOARG00020010085 #26	MAP1LC3B (ENSOARG00020010316) #28	ZCCHC14 (ENSOARG00020010371) #29	JPH3 (ENSOARG00020010721) #30	KLHDC4 (ENSOARG00020010847) #31	SLC7A5 (ENSOARG00020011537) #32	CA5A (ENSOARG00020011718) #33	BANP (ENSOARG00020011813) #34	ZFPM1 (ENSOARG00020012306) #35	ZC3H18 (ENSOARG00020012411) #37	IL17C (ENSOARG00020012956)	CYBA (ENSOARG00020013046)
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000160275	ENSGT00940000158087 #7	ENSGT00390000012498 #8	ENSGT00940000157543 #9	ENSGT00550000074994 #10	ENSGT00940000157410 #11	ENSGT00940000156519 #12	ENSGT00390000009535 #13	ENSGT00390000010285.d #14	ENSGT00700000104539.b.a #15	ENSGT00390000007838 #16	ENSGT00390000015933 #17	ENSGT00390000006738.a #19	ENSGT00390000002407.d.w #20	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619 #24	ENSGT00940000162251 #25	ENSGT00390000003910 #26	ENSGT00390000001368 #27	ENSGT00940000154158.k.a #28	ENSGT00520000055637.A.b #29	ENSGT00940000158707.a.b #30	ENSGT00390000003374 #31	ENSGT00940000155581.C #32	ENSGT00940000162066 #33	ENSGT00390000011116 #34	ENSGT00530000065415	ENSGT00530000063823.b.a #35	ENSGT01100000263484.B.a
Bos	ANCESTRAL SPECIES	4	ENSGT00940000160275	ENSGT00940000158087.h #7	ENSGT00390000012498 #8	ENSGT00940000157543 #9	ENSGT00550000074994 #10	ENSGT00940000157410 #11	ENSGT00940000156519 #12	ENSGT00390000009535 #13	ENSGT00390000010285.d #14	ENSGT00700000104539.b.a #15	ENSGT00390000007838 #16	ENSGT00390000015933 #17	ENSGT00390000006738.a #19	ENSGT00390000002407.d.w #20	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619 #24	ENSGT00940000162251 #25	ENSGT00390000003910 #26	ENSGT00390000001368 #27	ENSGT00940000154158.k.a #28	ENSGT00520000055637.A.b #29	ENSGT00940000158707.a.b #30	ENSGT00390000003374 #31	ENSGT00940000155581.C #32	ENSGT00940000162066 #33	ENSGT00390000011116 #34	ENSGT00530000065415	ENSGT00530000063823.b.a #35	ENSGT01100000263484.B.a
Bos_b	ANCESTRAL SPECIES		ENSGT00940000160275	ENSGT00940000158087.h #7	ENSGT00390000012498 #8	ENSGT00940000157543 #9	ENSGT00550000074994 #10	ENSGT00940000157410 #11	ENSGT00940000156519 #12	ENSGT00390000009535 #13	ENSGT00390000010285.d #14	ENSGT00700000104539.b.a #15	ENSGT00390000007838 #16	ENSGT00390000015933 #17	ENSGT00390000006738.a #19	ENSGT00390000002407.d.w #20	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619 #24	ENSGT00940000162251 #25	ENSGT00390000001368 #27	ENSGT00940000154158.k.a #28	ENSGT00520000055637.A.b #29	ENSGT00940000158707.a.b #30	ENSGT00390000003374 #31	ENSGT00940000155581.C #32	ENSGT00940000162066 #33	ENSGT00390000011116 #34	ENSGT00530000065415	ENSGT00530000063823.b.a #35	ENSGT01100000263484.B.a	ENSGT00730000111190 #37
Cow	MODERN SPECIES	9	ATP2C2 (ENSBTAG00000000945)	MEAK7 (ENSBTAG00000000946) #7	COTL1 (ENSBTAG00000016315) #8	KLHL36 (ENSBTAG00000008385) #9	USP10 (ENSBTAG00000009446) #10	CRISPLD2 (ENSBTAG00000021176) #11	ZDHHC7 (ENSBTAG00000002639) #12	KIAA0513 (ENSBTAG00000020835) #13	CIBAR2 (ENSBTAG00000020836) #14	GSE1 (ENSBTAG00000009918) #15	GINS2 (ENSBTAG00000044006) #16	C18H16orf74 (ENSBTAG00000052744) #17	EMC8 (ENSBTAG00000016075) #19	COX4I1 (ENSBTAG00000016079) #20	IRF8 (ENSBTAG00000017824) #21	FOXF1 (ENSBTAG00000000009) #22	MTHFSD (ENSBTAG00000012446) #23	FOXC2 (ENSBTAG00000012465) #24	FOXL1 (ENSBTAG00000040605) #25	FBXO31 (ENSBTAG00000002226) #27	MAP1LC3B (ENSBTAG00000011632) #28	ZCCHC14 (ENSBTAG00000014267) #29	JPH3 (ENSBTAG00000006899) #30	KLHDC4 (ENSBTAG00000006905) #31	SLC7A5 (ENSBTAG00000006731) #32	CA5A (ENSBTAG00000010151) #33	BANP (ENSBTAG00000023745) #34	ZFPM1 (ENSBTAG00000015766) #35	ENSBTAG00000018507	ZC3H18 (ENSBTAG00000019520) #37	CYBA (ENSBTAG00000051907)
Hybrid Bos Indicus	MODERN SPECIES	9	MEAK7 (ENSBIXG00005009358) #7	ENSBIXG00005009383 #8	KLHL36 (ENSBIXG00005009403) #9	USP10 (ENSBIXG00005000501) #10	CRISPLD2 (ENSBIXG00005009518) #11	ENSBIXG00005009543	ZDHHC7 (ENSBIXG00005009575) #12	KIAA0513 (ENSBIXG00005005913) #13	CIBAR2 (ENSBIXG00005009663) #14	GSE1 (ENSBIXG00005009803) #15	GINS2 (ENSBIXG00005009840) #16	ENSBIXG00005000642 #17	EMC8 (ENSBIXG00005006101) #19	COX4I1 (ENSBIXG00005000673) #20	IRF8 (ENSBIXG00005000680) #21	FOXF1 (ENSBIXG00005009962) #22	MTHFSD (ENSBIXG00005000729) #23	FOXC2 (ENSBIXG00005009988) #24	FOXL1 (ENSBIXG00005009998) #25	FBXO31 (ENSBIXG00005010145) #27	ENSBIXG00005010161 #28	ZCCHC14 (ENSBIXG00005005695) #29	JPH3 (ENSBIXG00005010214) #30	KLHDC4 (ENSBIXG00005010241) #31	SLC7A5 (ENSBIXG00005010266) #32	CA5A (ENSBIXG00005000833) #33	BANP (ENSBIXG00005010464) #34	ZNF469 (ENSBIXG00005010535)	ZFPM1 (ENSBIXG00005010566) #35	ENSBIXG00005000719	IL17C (ENSBIXG00005010593)
Bos_a	ANCESTRAL SPECIES	22	ENSGT00940000160275	ENSGT00940000158087.h #7	ENSGT00390000012498 #8	ENSGT00940000157543 #9	ENSGT00550000074994 #10	ENSGT00940000157410 #11	ENSGT00940000156519 #12	ENSGT00390000009535 #13	ENSGT00390000010285.d #14	ENSGT00700000104539.b.a #15	ENSGT00390000007838 #16	ENSGT00390000015933 #17	ENSGT00390000006738.a #19	ENSGT00390000002407.d.w #20	ENSGT00940000158140 #21	ENSGT00940000161035 #22	ENSGT00390000011730 #23	ENSGT00940000162619 #24	ENSGT00940000162251 #25	ENSGT00390000003910 #26	ENSGT00390000001368 #27	ENSGT00940000154158.k.a #28	ENSGT00520000055637.A.b #29	ENSGT00940000158707.a.b #30	ENSGT00390000003374 #31	ENSGT00940000155581.C #32	ENSGT00940000162066 #33	ENSGT00390000011116 #34	ENSGT00530000065415	ENSGT00530000063823.b.a #35	ENSGT01100000263484.B.a
Domestic yak	MODERN SPECIES	12	ATP2C2 (ENSBGRG00000016156)	MEAK7 (ENSBGRG00000016002) #7	COTL1 (ENSBGRG00000015897) #8	KLHL36 (ENSBGRG00000015821) #9	USP10 (ENSBGRG00000015567) #10	CRISPLD2 (ENSBGRG00000015210) #11	ZDHHC7 (ENSBGRG00000015026) #12	KIAA0513 (ENSBGRG00000014870) #13	CIBAR2 (ENSBGRG00000014741) #14	GSE1 (ENSBGRG00000013990) #15	GINS2 (ENSBGRG00000013893) #16	ENSBGRG00000013747 #17	EMC8 (ENSBGRG00000013626) #19	ENSBGRG00000013514 #20	IRF8 (ENSBGRG00000013321) #21	FOXF1 (ENSBGRG00000013269) #22	MTHFSD (ENSBGRG00000013171) #23	FOXC2 (ENSBGRG00000013151) #24	ENSBGRG00000013135 #25	ENSBGRG00000013092 #26	FBXO31 (ENSBGRG00000012951) #27	ENSBGRG00000012865 #28	ZCCHC14 (ENSBGRG00000012530) #29	JPH3 (ENSBGRG00000012488) #30	KLHDC4 (ENSBGRG00000012190) #31	SLC7A5 (ENSBGRG00000012015) #32	CA5A (ENSBGRG00000011715) #33	ENSBGRG00000011656	BANP (ENSBGRG00000011338) #34	ENSBGRG00000026914 #35	ENSBGRG00000026913
American bison	MODERN SPECIES	3209	ATP2C2 (ENSBBBG00000018817)	MEAK7 (ENSBBBG00000018779) #7	COTL1 (ENSBBBG00000004684) #8	KLHL36 (ENSBBBG00000018733) #9	USP10 (ENSBBBG00000018715) #10	CRISPLD2 (ENSBBBG00000018674) #11	ZDHHC7 (ENSBBBG00000004615) #12	KIAA0513 (ENSBBBG00000007669) #13	CIBAR2 (ENSBBBG00000018537) #14	GINS2 (ENSBBBG00000008351) #16	C16orf74 (ENSBBBG00000018518) #17	EMC8 (ENSBBBG00000018504) #19	COX4I1 (ENSBBBG00000018492) #20	ENSBBBG00000018477 #21	ENSBBBG00000018474 #21	FOXF1 (ENSBBBG00000009137) #22	MTHFSD (ENSBBBG00000004524) #23	ENSBBBG00000018420 #24	FBXO31 (ENSBBBG00000018416) #27	ENSBBBG00000018408 #28	ZCCHC14 (ENSBBBG00000018388) #29	JPH3 (ENSBBBG00000018334) #30	KLHDC4 (ENSBBBG00000018309) #31	ENSBBBG00000004474 #32
Siberian musk deer	MODERN SPECIES	1191	WFDC1 (ENSMMSG00000008626)	ATP2C2 (ENSMMSG00000008658)	MEAK7 (ENSMMSG00000008702) #7	COTL1 (ENSMMSG00000008739) #8	KLHL36 (ENSMMSG00000008771) #9	USP10 (ENSMMSG00000008812) #10	CRISPLD2 (ENSMMSG00000008895) #11	ZDHHC7 (ENSMMSG00000008935) #12	KIAA0513 (ENSMMSG00000008978) #13	CIBAR2 (ENSMMSG00000009053) #14	GSE1 (ENSMMSG00000009112) #15	GINS2 (ENSMMSG00000009257) #16	EMC8 (ENSMMSG00000009365) #19	COX4I1 (ENSMMSG00000009407) #20	IRF8 (ENSMMSG00000009447) #21	FOXF1 (ENSMMSG00000009511) #22	MTHFSD (ENSMMSG00000009532) #23	FOXC2 (ENSMMSG00000009543) #24	ENSMMSG00000009558 #26	FBXO31 (ENSMMSG00000009597) #27	ENSMMSG00000009639 ##28	ZCCHC14 (ENSMMSG00000009686) #29	JPH3 (ENSMMSG00000009750) #30	KLHDC4 (ENSMMSG00000009802) #31	SLC7A5 (ENSMMSG00000009999) #32	CA5A (ENSMMSG00000010041) #33	BANP (ENSMMSG00000010083) #34	ENSMMSG00000010165	ZFPM1 (ENSMMSG00000010177) #35	ENSMMSG00000010221	ZC3H18 (ENSMMSG00000010256) #37