Mus	ANCESTRAL SPECIES	13	ENSGT00940000154487.A	ENSGT00940000156392.a	ENSGT00940000158516	ENSGT00730000111265	ENSGT00940000158617 #11	ENSGT00390000012671 #12	ENSGT00940000159661 #13	ENSGT00530000063679.A #14	ENSGT00940000154110.b #15	ENSGT00940000156558 #16	ENSGT00940000158013 #17	ENSGT00550000074787 #18	ENSGT00390000009110 #19	ENSGT00390000015759 #20	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000158810 #25	ENSGT00390000007644 #26	ENSGT00390000001083 #27	ENSGT00390000014496.w.b #28	ENSGT00390000014496.w.a #29	ENSGT00390000014496.x #31	ENSGT00940000161699 #32	ENSGT00950000182827.A #33	ENSGT00390000010308.jb #34	ENSGT00390000017390 #36	ENSGT00530000063970.d	ENSGT00940000163897.e	ENSGT00940000162055	ENSGT00940000158134.B
Mus_A	ANCESTRAL SPECIES	18	ENSGT00940000154487.A	ENSGT00940000156392.a	ENSGT00940000158516	ENSGT00730000111265	ENSGT00940000158617 #11	ENSGT00390000012671 #12	ENSGT00940000159661 #13	ENSGT00530000063679.A #14	ENSGT00940000154110.b #15	ENSGT00940000156558 #16	ENSGT00940000158013 #17	ENSGT00550000074787 #18	ENSGT00390000009110 #19	ENSGT00390000015759 #20	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000158810 #25	ENSGT00390000007644 #26	ENSGT00390000001083 #27	ENSGT00390000014496.w.b #28	ENSGT00390000014496.w.a #29	ENSGT00390000014496.x #31	ENSGT00940000161699 #32	ENSGT00950000182827.A #33	ENSGT00390000010308.jb #34	ENSGT00390000017390 #36	ENSGT00530000063970.d	ENSGT00940000163897.e	ENSGT00940000162055	ENSGT00940000158134.B
Mus_B	ANCESTRAL SPECIES	18	ENSGT00940000154487.A	ENSGT00940000156392.a	ENSGT00940000158516	ENSGT00730000111265	ENSGT00940000158617 #11	ENSGT00390000012671 #12	ENSGT00940000159661 #13	ENSGT00530000063679.A #14	ENSGT00940000154110.b #15	ENSGT00940000156558 #16	ENSGT00940000158013 #17	ENSGT00550000074787 #18	ENSGT00390000009110 #19	ENSGT00390000015759 #20	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000158810 #25	ENSGT00390000007644 #26	ENSGT00390000001083 #27	ENSGT00390000014496.w.b #28	ENSGT00390000014496.w.a.a #29	ENSGT00390000014496.w.a.b #30	ENSGT00390000014496.x #31	ENSGT00940000161699 #32	ENSGT00950000182827.A #33	ENSGT00390000010308.jb #34	ENSGT00390000017390 #36	ENSGT00530000063970.d	ENSGT00940000163897.e	ENSGT00940000163897.f
Mus_C	ANCESTRAL SPECIES	12	ENSGT00940000154487.A	ENSGT00940000156392.a	ENSGT00940000158516	ENSGT00730000111265	ENSGT00940000158617 #11	ENSGT00390000012671 #12	ENSGT00940000159661 #13	ENSGT00530000063679.A #14	ENSGT00940000154110.b #15	ENSGT00940000156558 #16	ENSGT00940000158013 #17	ENSGT00550000074787 #18	ENSGT00390000009110 #19	ENSGT00390000015759 #20	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000158810 #25	ENSGT00390000007644 #26	ENSGT00390000001083.e #27	ENSGT00390000014496.w.b #28	ENSGT00390000014496.w.a.a #29	ENSGT00390000014496.w.a.b #30	ENSGT00390000014496.x #31	ENSGT00940000161699 #32	ENSGT00950000182827.A #33	ENSGT00390000010308.jb #34	ENSGT00390000017390 #36	ENSGT00530000063970.d	ENSGT00940000163897.e	ENSGT00940000162055
Steppe mouse	MODERN SPECIES	3406				ENSMSIG00000004992 #10	Zbtb20 (ENSMSIG00000004942) #11	Tigit (ENSMSIG00000004912) #12	Drd3 (ENSMSIG00000004875) #13	Qtrt2 (ENSMSIG00000004823) #14	Ccdc191 (ENSMSIG00000004623) #15	Zdhhc23 (ENSMSIG00000004574) #16	Gramd1c (ENSMSIG00000004426) #17	Atp6v1a (ENSMSIG00000004407) #18	Naa50 (ENSMSIG00000004261) #19	Usf3 (ENSMSIG00000004191) #20	Sidt1 (ENSMSIG00000003702) #21	Spice1 (ENSMSIG00000003610) #22	ENSMSIG00000003585 #23	Cfap44 (ENSMSIG00000003452) #24	Boc (ENSMSIG00000003320) #25	Nepro (ENSMSIG00000003236) #26	ENSMSIG00000003178 #27	Cd200r1 (ENSMSIG00000003145) #28	Cd200r4 (ENSMSIG00000003095) #29	Cd200r2 (ENSMSIG00000003084) #30	Cd200r3 (ENSMSIG00000002661) #31	Ccdc80 (ENSMSIG00000002573) #32	Slc35a5 (ENSMSIG00000002500) #33	Atg3 (ENSMSIG00000002434) #34	ENSMSIG00000002420 #35	Btla (ENSMSIG00000002375) #36
spretus	MODERN SPECIES	7	Tex55 (MGP_SPRETEiJ_G0021650)	Igsf11 (MGP_SPRETEiJ_G0021651)	Lsamp (MGP_SPRETEiJ_G0021652)	Gap43 (MGP_SPRETEiJ_G0021653)	Zbtb20 (MGP_SPRETEiJ_G0021654) #11	Tigit (MGP_SPRETEiJ_G0021655) #12	Drd3 (MGP_SPRETEiJ_G0021656) #13	Qtrt2 (MGP_SPRETEiJ_G0021657) #14	Ccdc191 (MGP_SPRETEiJ_G0021658) #15	Zdhhc23 (MGP_SPRETEiJ_G0021659) #16	MGP_SPRETEiJ_G0021660 #17	Atp6v1a (MGP_SPRETEiJ_G0021661) #18	Naa50 (MGP_SPRETEiJ_G0021662) #19	Usf3 (MGP_SPRETEiJ_G0021663) #20	Sidt1 (MGP_SPRETEiJ_G0021664) #21	Spice1 (MGP_SPRETEiJ_G0021665) #22	Cfap44 (MGP_SPRETEiJ_G0021666) #24	Boc (MGP_SPRETEiJ_G0021667) #25	Nepro (MGP_SPRETEiJ_G0021668) #26	Gtpbp8 (MGP_SPRETEiJ_G0021669) #27	Cd200r1 (MGP_SPRETEiJ_G0021670) #28	MGP_SPRETEiJ_G0021671 #31	Cd200r3 (MGP_SPRETEiJ_G0021672) #31	Ccdc80 (MGP_SPRETEiJ_G0021673) #32	Slc35a5 (MGP_SPRETEiJ_G0021674) #33	Atg3 (MGP_SPRETEiJ_G0021675) #34	Btla (MGP_SPRETEiJ_G0021676) #36	Cd200 (MGP_SPRETEiJ_G0021677)	MGP_SPRETEiJ_G0021678	Slc9c1 (MGP_SPRETEiJ_G0021679)	Gcsam (MGP_SPRETEiJ_G0021680)
Mouse	MODERN SPECIES	7	Tex55 (ENSMUSG00000022798)	Igsf11 (ENSMUSG00000022790)	Lsamp (ENSMUSG00000061080)	Gap43 (ENSMUSG00000047261)	Zbtb20 (ENSMUSG00000022708) #11	Tigit (ENSMUSG00000071552) #12	Drd3 (ENSMUSG00000022705) #13	Qtrt2 (ENSMUSG00000022704) #14	Ccdc191 (ENSMUSG00000022701) #15	Zdhhc23 (ENSMUSG00000036304) #16	Gramd1c (ENSMUSG00000036292) #17	Atp6v1a (ENSMUSG00000052459) #18	Naa50 (ENSMUSG00000022698) #19	Usf3 (ENSMUSG00000068284) #20	Sidt1 (ENSMUSG00000022696) #21	Spice1 (ENSMUSG00000043065) #22	Cfap44 (ENSMUSG00000071550) #24	Boc (ENSMUSG00000022687) #25	Nepro (ENSMUSG00000036208) #26	Gtpbp8 (ENSMUSG00000022668) #27	Cd200r1 (ENSMUSG00000022667) #28	Cd200r4 (ENSMUSG00000062082) #29	Cd200r2 (ENSMUSG00000090176) #30	Cd200r3 (ENSMUSG00000036172) #31	Ccdc80 (ENSMUSG00000022665) #32	Slc35a5 (ENSMUSG00000022664) #33	Atg3 (ENSMUSG00000022663) #34	Btla (ENSMUSG00000052013) #36	Cd200 (ENSMUSG00000022661)	Cd200l1 (ENSMUSG00000053182)	Cd200l2 (ENSMUSG00000116542)
Ryukyu mouse	MODERN SPECIES	7	Tex55 (MGP_CAROLIEiJ_G0020751)	Igsf11 (MGP_CAROLIEiJ_G0020752)	Lsamp (MGP_CAROLIEiJ_G0020753)	Gap43 (MGP_CAROLIEiJ_G0020754)	Zbtb20 (MGP_CAROLIEiJ_G0020755) #11	Tigit (MGP_CAROLIEiJ_G0020756) #12	Drd3 (MGP_CAROLIEiJ_G0020757) #13	Qtrt2 (MGP_CAROLIEiJ_G0020758) #14	Ccdc191 (MGP_CAROLIEiJ_G0020759) #15	Zdhhc23 (MGP_CAROLIEiJ_G0020760) #16	MGP_CAROLIEiJ_G0020761 #17	Atp6v1a (MGP_CAROLIEiJ_G0020762) #18	Naa50 (MGP_CAROLIEiJ_G0020763) #19	Usf3 (MGP_CAROLIEiJ_G0020764) #20	Sidt1 (MGP_CAROLIEiJ_G0020765) #21	Spice1 (MGP_CAROLIEiJ_G0020766) #22	Cfap44 (MGP_CAROLIEiJ_G0020767) #24	Boc (MGP_CAROLIEiJ_G0020768) #25	Nepro (MGP_CAROLIEiJ_G0020769) #26	Gtpbp8 (MGP_CAROLIEiJ_G0020770) #27	Cd200r1 (MGP_CAROLIEiJ_G0020771) #28	MGP_CAROLIEiJ_G0020772 #29	Cd200r3 (MGP_CAROLIEiJ_G0020773) #31	Ccdc80 (MGP_CAROLIEiJ_G0020774) #32	Slc35a5 (MGP_CAROLIEiJ_G0020775) #33	Atg3 (MGP_CAROLIEiJ_G0020776) #34	Btla (MGP_CAROLIEiJ_G0020777) #36	Cd200 (MGP_CAROLIEiJ_G0020778)	Cd200l1 (MGP_CAROLIEiJ_G0020779)	Slc9c1 (MGP_CAROLIEiJ_G0020780)	Gcsam (MGP_CAROLIEiJ_G0020781)
Shrew mouse	MODERN SPECIES	3	Tex55 (MGP_PahariEiJ_G0016451)	Igsf11 (MGP_PahariEiJ_G0016452)	Lsamp (MGP_PahariEiJ_G0016453)	Gap43 (MGP_PahariEiJ_G0016454)	Zbtb20 (MGP_PahariEiJ_G0016455) #11	Tigit (MGP_PahariEiJ_G0016456) #12	Drd3 (MGP_PahariEiJ_G0016457) #13	Qtrt2 (MGP_PahariEiJ_G0016458) #14	MGP_PahariEiJ_G0016459	Zdhhc23 (MGP_PahariEiJ_G0016460) #16	MGP_PahariEiJ_G0016461 #17	Atp6v1a (MGP_PahariEiJ_G0016462) #18	Naa50 (MGP_PahariEiJ_G0016463) #19	Usf3 (MGP_PahariEiJ_G0016464) #20	Sidt1 (MGP_PahariEiJ_G0016465) #21	Spice1 (MGP_PahariEiJ_G0016466) #22	Cfap44 (MGP_PahariEiJ_G0016467) #24	Boc (MGP_PahariEiJ_G0016468) #25	Nepro (MGP_PahariEiJ_G0016469) #26	Gtpbp8 (MGP_PahariEiJ_G0016470) #27	Cd200r1 (MGP_PahariEiJ_G0016471) #28	MGP_PahariEiJ_G0016472 #31	Ccdc80 (MGP_PahariEiJ_G0016473) #32	Slc35a5 (MGP_PahariEiJ_G0016474) #33	Atg3 (MGP_PahariEiJ_G0016475) #34	Btla (MGP_PahariEiJ_G0016476) #36	Cd200 (MGP_PahariEiJ_G0016477)	Cd200l1 (MGP_PahariEiJ_G0016478)	Slc9c1 (MGP_PahariEiJ_G0016479)	Gcsam (MGP_PahariEiJ_G0016480)	BC016579 (MGP_PahariEiJ_G0016481)