Tetrapoda	ANCESTRAL SPECIES	64	ENSGT00940000156392.a	ENSGT00940000173613	ENSGT00940000165328	ENSGT00940000158516	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000158810 #26	ENSGT00940000157596	ENSGT00940000155717	ENSGT00940000154826	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00390000012981	ENSGT00390000018386	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467
Amniota	ANCESTRAL SPECIES	51	ENSGT00940000156392.a	ENSGT00940000165328	ENSGT00940000158516	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000164240	ENSGT00940000173558	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00940000164470	ENSGT00390000010308 #32	ENSGT00940000158556	ENSGT00950000183022.a.b	ENSGT00390000018244
Mammalia	ANCESTRAL SPECIES	92	ENSGT00940000156392.a	ENSGT00940000165328	ENSGT00940000158516	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000173558	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308 #32
Theria	ANCESTRAL SPECIES	1	ENSGT00940000165328	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000173558	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308 #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35	ENSGT00390000014574 #37
Eutheria	ANCESTRAL SPECIES	5	ENSGT00940000165328	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00940000161555 #24	ENSGT00940000173558	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308 #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35	ENSGT00940000158134.B #36
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00900000143555	ENSGT00390000012671 #10	ENSGT00940000164925	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00910000147086	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00940000164240	ENSGT00940000173558	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308 #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00900000143555	ENSGT00390000012671 #10	ENSGT00940000164925	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00910000147086	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308 #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35	ENSGT00940000158134.B #36
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000173613	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308 #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35	ENSGT00940000158134.B #36
Glires	ANCESTRAL SPECIES	2	ENSGT00940000173613	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308.jb #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35	ENSGT00940000158134.B #36
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000173613	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308.jb #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35	ENSGT00940000158134.B #36
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000173613	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496 #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308.jb #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35	ENSGT00940000158134.B #36
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000156392.a	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496.u #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308.jb #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35	ENSGT00940000158134.B #36
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000007084.d.f.a.b #20	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496.u.a ##29	ENSGT00390000014496.u.b #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308.jb #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000163897	ENSGT00940000162055 #35
Marmotini_b	ANCESTRAL SPECIES	36	ENSGT00940000158516	ENSGT00910000146751 #7	ENSGT00730000111265 #8	ENSGT00940000158617 #9	ENSGT00390000012671 #10	ENSGT00940000159661 #11	ENSGT00530000063679.A #12	ENSGT00940000154110.b #13	ENSGT00940000156558 #14	ENSGT00940000158013 #15	ENSGT00550000074787 #17	ENSGT00390000009110 #18	ENSGT00390000015759 #19	ENSGT00390000007084.d.f.a.b #20	ENSGT00390000010091.d #21	ENSGT00390000006207 #22	ENSGT00950000185083 #23	ENSGT00940000161555 #24	ENSGT00960000186749 #25	ENSGT00940000158810 #26	ENSGT00390000007644 #27	ENSGT00390000001083 #28	ENSGT00390000014496.u.a ##29	ENSGT00390000014496.u.b #29	ENSGT00940000161699 #30	ENSGT00950000182827.A #31	ENSGT00390000010308.jb #32	ENSGT00390000017390 #33	ENSGT00530000063970.d #34	ENSGT00940000162055 #35	ENSGT00940000158134.B #36
Arctic ground squirrel	MODERN SPECIES	5	ENSUPAG00010019867 #7	GAP43 (ENSUPAG00010019863) #8	ZBTB20 (ENSUPAG00010019847) #9	TIGIT (ENSUPAG00010019839) #10	DRD3 (ENSUPAG00010019802) #11	QTRT2 (ENSUPAG00010019771) #12	CCDC191 (ENSUPAG00010019745) #13	ZDHHC23 (ENSUPAG00010019733) #14	GRAMD1C (ENSUPAG00010019710) #15	ENSUPAG00010019680 #16	ATP6V1A (ENSUPAG00010019667) #17	NAA50 (ENSUPAG00010019654) #18	USF3 (ENSUPAG00010019645) #19	ENSUPAG00010019640 #20	SIDT1 (ENSUPAG00010019572) #21	SPICE1 (ENSUPAG00010019559) #22	ENSUPAG00010019557 #23	ENSUPAG00010019554 #24	ENSUPAG00010019552 #25	BOC (ENSUPAG00010019511) #26	NEPRO (ENSUPAG00010019488) #27	GTPBP8 (ENSUPAG00010019482) #28	ENSUPAG00010019459 #29	CCDC80 (ENSUPAG00010019448) #30	ENSUPAG00010019440 #31	ATG3 (ENSUPAG00010019432) #32	BTLA (ENSUPAG00010019423) #33	CD200 (ENSUPAG00010019409) #34	SLC9C1 (ENSUPAG00010019390) #35	GCSAM (ENSUPAG00010019367) #36	C3orf52 (ENSUPAG00010019351) #37