Euteleostomi ANCESTRAL SPECIES 131 ENSGT00940000154913 ENSGT00940000162528 ENSGT00940000157516 ENSGT00390000006618 ENSGT00390000010672 ENSGT00940000164537 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b #17 ENSGT00970000195704 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00960000187176 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 Sarcopterygii ANCESTRAL SPECIES 184 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000164537 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b #17 ENSGT00970000195704 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00960000187176 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 Tetrapoda ANCESTRAL SPECIES 40 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b #17 ENSGT00970000195704 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Amniota ANCESTRAL SPECIES 7 ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a #17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Mammalia ANCESTRAL SPECIES 4 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a #17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Theria ANCESTRAL SPECIES ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a #17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b #17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Euarchontoglires_A ANCESTRAL SPECIES 23 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000168125 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179 ENSGT00940000154390.A.j Glires ANCESTRAL SPECIES 24 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000168125 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179 ENSGT00940000154390.A.j Rodentia ANCESTRAL SPECIES 12 ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000168125 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179 ENSGT00940000154390.A.j Rodentia_B ANCESTRAL SPECIES 40 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00390000011072 ENSGT00390000015821 ENSGT00530000063186.b.a ENSGT00940000155450 Kangaroo rat MODERN SPECIES 480 ENSDORG00000014695 #14 ENSDORG00000025334 #15 ENSDORG00000015981 #16 Trgc4 (ENSDORG00000029771) #17 Amph (ENSDORG00000000364) #18 ENSDORG00000023528 #19 Vps41 (ENSDORG00000015881) #20 Pou6f2 (ENSDORG00000011157) #21 Yae1d1 (ENSDORG00000009759) #22 Rala (ENSDORG00000024439) #23 ENSDORG00000027169 #24 ENSDORG00000028130 #25 ENSDORG00000001010 #26 Sugct (ENSDORG00000001011) #27 ENSDORG00000001744 #28 Gli3 (ENSDORG00000001532) #29 AW209491 (ENSDORG00000026137) #30 Psma2 (ENSDORG00000011746) #31 Mrpl32 (ENSDORG00000011748) #32 Hecw1 (ENSDORG00000011163) #33 ENSDORG00000010332 #34 Myomorpha ANCESTRAL SPECIES 50 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00390000011072 ENSGT00390000015821 ENSGT00530000063186.b.a ENSGT00940000155450 Muroidea ANCESTRAL SPECIES 78 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 Muroidea_A ANCESTRAL SPECIES 14 ENSGT01100000263548.a.a.b ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A Cricetidae ANCESTRAL SPECIES 7 ENSGT01100000263486.a.b.a.a.a.b ENSGT01100000263486.a.b.a.a.b ENSGT01100000263548.a.a.b ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A Cricetinae ANCESTRAL SPECIES 26 ENSGT01100000263486.a.b.a.a.a.b ENSGT01100000263486.a.b.a.a.b ENSGT01100000263548.a.a.b ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000164413 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A Golden Hamster MODERN SPECIES 646 Elmo1 (ENSMAUG00000021051) Gpr141 (ENSMAUG00000008686) Nme8 (ENSMAUG00000016668) #16 Sfrp4 (ENSMAUG00000018868) Epdr1 (ENSMAUG00000004400) Stard3nl (ENSMAUG00000014492) ENSMAUG00000015422 #18 Vps41 (ENSMAUG00000018045) #20 ENSMAUG00000013131 #21 Yae1d1 (ENSMAUG00000015770) #22 Rala (ENSMAUG00000008652) #23 Cdk13 (ENSMAUG00000017760) #25 ENSMAUG00000016486 #26 Sugct (ENSMAUG00000009567) #27 Inhba (ENSMAUG00000021024) #28 Gli3 (ENSMAUG00000010007) #29 AW209491 (ENSMAUG00000007021) #30 Psma2 (ENSMAUG00000009719) #31 Mrpl32 (ENSMAUG00000019188) #32 Hecw1 (ENSMAUG00000003157) #33 ENSMAUG00000012797 ENSMAUG00000021330 Tbce (ENSMAUG00000013936) B3galnt2 (ENSMAUG00000013962) Gng4 (ENSMAUG00000011229) Chinese hamster chok1gshd MODERN SPECIES 317 Or2p2 (ENSCGRG00001007809) Aoah (ENSCGRG00001000322) Elmo1 (ENSCGRG00001019058) Gpr141 (ENSCGRG00001008158) Gpr141b (ENSCGRG00001009813) Nme8 (ENSCGRG00001019516) #16 Sfrp4 (ENSCGRG00001016880) Epdr1 (ENSCGRG00001014717) Stard3nl (ENSCGRG00001000801) ENSCGRG00001009580 #17 Amph (ENSCGRG00001019554) #18 Vps41 (ENSCGRG00001018659) #20 ENSCGRG00001005827 ENSCGRG00001010504 #21 ENSCGRG00001025025 #21 Yae1d1 (ENSCGRG00001020898) #22 ENSCGRG00001012449 #23 Cdk13 (ENSCGRG00001020334) #25 ENSCGRG00001011481 #26 Sugct (ENSCGRG00001009192) #27 Inhba (ENSCGRG00001019473) #28 Gli3 (ENSCGRG00001007632) #29 AW209491 (ENSCGRG00001006859) #30 Psma2 (ENSCGRG00001023927) #31 Mrpl32 (ENSCGRG00001016443) #32 Hecw1 (ENSCGRG00001018493) #33 Arid4b (ENSCGRG00001014397) Ggps1 (ENSCGRG00001020297) Tbce (ENSCGRG00001023614) B3galnt2 (ENSCGRG00001011516) Gng4 (ENSCGRG00001003037) Cricetidae_B ANCESTRAL SPECIES 5 ENSGT01100000263486.a.b.a.a.a.b ENSGT01100000263486.a.b.a.a.b ENSGT01100000263548.a.a.b ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A Northern American deer mouse MODERN SPECIES 18 Or2p2 (ENSPEMG00000005086) Aoah (ENSPEMG00000010535) Elmo1 (ENSPEMG00000018278) ENSPEMG00000027404 Gpr141 (ENSPEMG00000004105) Gpr141b (ENSPEMG00000029118) Nme8 (ENSPEMG00000021510) #16 Sfrp4 (ENSPEMG00000023817) Epdr1 (ENSPEMG00000028013) Stard3nl (ENSPEMG00000012415) ENSPEMG00000030898 #17 ENSPEMG00000030093 #17 Amph (ENSPEMG00000001572) #18 Vps41 (ENSPEMG00000022150) #20 ENSPEMG00000020563 #21 Yae1d1 (ENSPEMG00000026901) #22 Rala (ENSPEMG00000026406) #23 ENSPEMG00000027212 Cdk13 (ENSPEMG00000020703) #25 ENSPEMG00000026169 #26 Sugct (ENSPEMG00000020290) #27 ENSPEMG00000028161 Inhba (ENSPEMG00000030253) #28 ENSPEMG00000001076 Gli3 (ENSPEMG00000022194) #29 ENSPEMG00000011637 ENSPEMG00000026547 AW209491 (ENSPEMG00000016335) #30 Psma2 (ENSPEMG00000000680) #31 Mrpl32 (ENSPEMG00000031368) #32 Hecw1 (ENSPEMG00000023229) #33 Prairie vole MODERN SPECIES 85 Vps41 (ENSMOCG00000018741) #20 ENSMOCG00000004652 ENSMOCG00000005809 ENSMOCG00000015726 #21 Yae1d1 (ENSMOCG00000012487) #22 Rala (ENSMOCG00000000189) #23 Cdk13 (ENSMOCG00000018212) #25 ENSMOCG00000013905 #26 Sugct (ENSMOCG00000021393) #27 Inhba (ENSMOCG00000001049) #28 Gli3 (ENSMOCG00000018186) #29 ENSMOCG00000014175 AW209491 (ENSMOCG00000022967) #30 ENSMOCG00000013606 #31 Mrpl32 (ENSMOCG00000000157) #32 Hecw1 (ENSMOCG00000001967) #33 ENSMOCG00000003914 ENSMOCG00000007240 Ggps1 (ENSMOCG00000018805) Tbce (ENSMOCG00000009857) Murinae ANCESTRAL SPECIES 27 ENSGT01100000263548.a.a.b ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A Mus ANCESTRAL SPECIES 18 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b.i ##17 ENSGT00860000135699 ENSGT00950000186470 ENSGT00940000168125 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.b.b.b.j ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A Mus_A ANCESTRAL SPECIES 14 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b.i ##17 ENSGT00860000135699 ENSGT00950000186470 ENSGT00940000168125 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.b.b.b.j ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.db #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A Mus_B ANCESTRAL SPECIES 13 ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.d #17 ENSGT00860000135699 ENSGT00950000186470 ENSGT00940000168125 ENSGT00980000200102 ENSGT00940000153143.a.b.b.b.j ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.db #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A Mouse MODERN SPECIES 4 Trgv2 (ENSMUSG00000076754) ##17 Trgj2 (ENSMUSG00000105830) Trgc2 (ENSMUSG00000076752) #17 Trgc3 (ENSMUSG00000091682) #17 Trgj3 (ENSMUSG00000104630) Trgv3 (ENSMUSG00000076750) ##17 Trgc1 (ENSMUSG00000076749) #17 Trgj1 (ENSMUSG00000104962) Trgv5 (ENSMUSG00000076747) Trgv6 (ENSMUSG00000076746) Trgv4 (ENSMUSG00000076745) ##17 Trgv7 (ENSMUSG00000076744) ##17 Amph (ENSMUSG00000021314) #18 Vps41 (ENSMUSG00000041236) #20 Pou6f2 (ENSMUSG00000009734) #21 Yae1d1 (ENSMUSG00000075054) #22 Rala (ENSMUSG00000008859) #23 Cdk13 (ENSMUSG00000041297) #25 Mplkip (ENSMUSG00000012429) #26 Sugct (ENSMUSG00000055137) #27 Inhba (ENSMUSG00000041324) #28 Gli3 (ENSMUSG00000021318) #29 AW209491 (ENSMUSG00000039182) #30 Psma2 (ENSMUSG00000015671) #31 Mrpl32 (ENSMUSG00000015672) #32 Hecw1 (ENSMUSG00000021301) #33 Arid4b (ENSMUSG00000039219) Ggps1 (ENSMUSG00000021302) Tbce (ENSMUSG00000039233) B3galnt2 (ENSMUSG00000039242) Gng4 (ENSMUSG00000021303) Mus_C ANCESTRAL SPECIES 10 ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.d #17 ENSGT00860000135699 ENSGT00950000186470 ENSGT00940000168125 ENSGT00980000200102 ENSGT00940000153143.a.b.b.b.j ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.db #32 ENSGT00940000158294 #33 ENSGT00940000158149 ENSGT00940000153498.A ENSGT00530000063405.a ENSGT00940000156562 ENSGT01100000263497.A spretus MODERN SPECIES 4 Gpr141b (MGP_SPRETEiJ_G0019112) Nme8 (MGP_SPRETEiJ_G0019111) #16 MGP_SPRETEiJ_G0019110 Epdr1 (MGP_SPRETEiJ_G0019109) Stard3nl (MGP_SPRETEiJ_G0019108) Trgc4 (MGP_SPRETEiJ_G0002244) #17 Trgj4 (MGP_SPRETEiJ_G0002254) Trgj3 (MGP_SPRETEiJ_G0002253) Trgv5 (MGP_SPRETEiJ_G0002333) Trgv6 (MGP_SPRETEiJ_G0002332) Trgv4 (MGP_SPRETEiJ_G0002331) ##17 Trgv7 (MGP_SPRETEiJ_G0002330) ##17 MGP_SPRETEiJ_G0019107 #18 Vps41 (MGP_SPRETEiJ_G0019106) #20 Pou6f2 (MGP_SPRETEiJ_G0019105) #21 Yae1d1 (MGP_SPRETEiJ_G0019104) #22 Rala (MGP_SPRETEiJ_G0019103) #23 Cdk13 (MGP_SPRETEiJ_G0019102) #25 MGP_SPRETEiJ_G0019101 #27 Inhba (MGP_SPRETEiJ_G0019100) #28 Gli3 (MGP_SPRETEiJ_G0019099) #29 AW209491 (MGP_SPRETEiJ_G0019098) #30 Psma2 (MGP_SPRETEiJ_G0019097) #31 Mrpl32 (MGP_SPRETEiJ_G0019096) #32 Hecw1 (MGP_SPRETEiJ_G0019095) #33 Arid4b (MGP_SPRETEiJ_G0019094) MGP_SPRETEiJ_G0019093 Tbce (MGP_SPRETEiJ_G0019092) B3galnt2 (MGP_SPRETEiJ_G0019091) MGP_SPRETEiJ_G0019090 Gng4 (MGP_SPRETEiJ_G0019089) Steppe mouse MODERN SPECIES 130 ENSMSIG00000003046 #18 Vps41 (ENSMSIG00000002761) #20 Pou6f2 (ENSMSIG00000002639) #21 Yae1d1 (ENSMSIG00000002612) #22 Rala (ENSMSIG00000002581) #23 Cdk13 (ENSMSIG00000002486) #25 ENSMSIG00000002458 #26 ENSMSIG00000002438 ENSMSIG00000002339 #27 Ryukyu mouse MODERN SPECIES 4 Epdr1 (MGP_CAROLIEiJ_G0018253) Stard3nl (MGP_CAROLIEiJ_G0018252) Trgc4 (MGP_CAROLIEiJ_G0002118) #17 Trgj4 (MGP_CAROLIEiJ_G0002127) MGP_CAROLIEiJ_G0002208 MGP_CAROLIEiJ_G0002207 ##17 MGP_CAROLIEiJ_G0002206 ##17 Trgj3 (MGP_CAROLIEiJ_G0002126) Trgv5 (MGP_CAROLIEiJ_G0002205) MGP_CAROLIEiJ_G0002204 ##17 Trgv4 (MGP_CAROLIEiJ_G0002203) ##17 Trgv7 (MGP_CAROLIEiJ_G0002202) ##17 MGP_CAROLIEiJ_G0018251 #18 Vps41 (MGP_CAROLIEiJ_G0018250) #20 Pou6f2 (MGP_CAROLIEiJ_G0018249) #21 Yae1d1 (MGP_CAROLIEiJ_G0018248) #22 Rala (MGP_CAROLIEiJ_G0018247) #23 Cdk13 (MGP_CAROLIEiJ_G0018246) #25 MGP_CAROLIEiJ_G0018245 #26 MGP_CAROLIEiJ_G0018244 #26 Sugct (MGP_CAROLIEiJ_G0018243) #27 Inhba (MGP_CAROLIEiJ_G0018242) #28 Gli3 (MGP_CAROLIEiJ_G0018241) #29 AW209491 (MGP_CAROLIEiJ_G0018240) #30 Psma2 (MGP_CAROLIEiJ_G0018239) #31 Mrpl32 (MGP_CAROLIEiJ_G0018238) #32 Hecw1 (MGP_CAROLIEiJ_G0018237) #33 Arid4b (MGP_CAROLIEiJ_G0018236) Ggps1 (MGP_CAROLIEiJ_G0018235) Tbce (MGP_CAROLIEiJ_G0018234) MGP_CAROLIEiJ_G0018233 Shrew mouse MODERN SPECIES 7 Gpr141b (MGP_PahariEiJ_G0019306) Nme8 (MGP_PahariEiJ_G0019305) #16 MGP_PahariEiJ_G0019304 Epdr1 (MGP_PahariEiJ_G0019303) Stard3nl (MGP_PahariEiJ_G0019302) Trgc4 (MGP_PahariEiJ_G0001956) #17 Trgj4 (MGP_PahariEiJ_G0001963) Trgj3 (MGP_PahariEiJ_G0001962) Trgv5 (MGP_PahariEiJ_G0002042) MGP_PahariEiJ_G0002041 ##17 Trgv4 (MGP_PahariEiJ_G0002040) ##17 Trgv7 (MGP_PahariEiJ_G0002039) ##17 MGP_PahariEiJ_G0019301 #18 Vps41 (MGP_PahariEiJ_G0019300) #20 Pou6f2 (MGP_PahariEiJ_G0019299) #21 Yae1d1 (MGP_PahariEiJ_G0019298) #22 Rala (MGP_PahariEiJ_G0019297) #23 Cdk13 (MGP_PahariEiJ_G0019296) #25 MGP_PahariEiJ_G0019295 #26 MGP_PahariEiJ_G0019294 #26 Sugct (MGP_PahariEiJ_G0019293) #27 Inhba (MGP_PahariEiJ_G0019292) #28 Gli3 (MGP_PahariEiJ_G0019291) #29 AW209491 (MGP_PahariEiJ_G0019290) #30 Psma2 (MGP_PahariEiJ_G0019289) #31 Mrpl32 (MGP_PahariEiJ_G0019288) #32 Hecw1 (MGP_PahariEiJ_G0019287) #33 Arid4b (MGP_PahariEiJ_G0019286) Ggps1 (MGP_PahariEiJ_G0019285) MGP_PahariEiJ_G0019284 MGP_PahariEiJ_G0019283 Rat DUPLICATION Rat MODERN SPECIES 14 Tmem168 (ENSRNOG00000057290) LOC100911252 (ENSRNOG00000062896) ENSRNOG00000064825 Tas2r7l (ENSRNOG00000024685) AABR07059877.1 (ENSRNOG00000039626) Vwde (ENSRNOG00000024709) Tmem106b (ENSRNOG00000006206) ENSRNOG00000069963 ENSRNOG00000068666 Thsd7a (ENSRNOG00000030151) Phf14 (ENSRNOG00000005775) Ndufa4 (ENSRNOG00000005512) ENSRNOG00000066267 LOC680964 (ENSRNOG00000047566) ENSRNOG00000065391 LOC500028 (ENSRNOG00000008962) #22 Rps4x-ps9 (ENSRNOG00000029574) Nxph1 (ENSRNOG00000008939) Ica1 (ENSRNOG00000008628) Glcci1 (ENSRNOG00000008524) Rpa3 (ENSRNOG00000008309) Mios (ENSRNOG00000007924) Col28a1 (ENSRNOG00000033618) C1galt1 (ENSRNOG00000007804) Polr1d-ps1 (ENSRNOG00000065557) Asns (ENSRNOG00000007546) Sdhaf3 (ENSRNOG00000011283) Dlx5 (ENSRNOG00000010905) ENSRNOG00000068262 Dlx6 (ENSRNOG00000063630) Sem1 (ENSRNOG00000010420) Rat MODERN SPECIES 8 Elmo1 (ENSRNOG00000059705) Gpr141 (ENSRNOG00000066332) Sfrp4 (ENSRNOG00000054957) Nme8 (ENSRNOG00000058285) #16 Epdr1 (ENSRNOG00000060141) LOC498759 (ENSRNOG00000050687) Stard3nl (ENSRNOG00000052429) ENSRNOG00000063508 #17 ENSRNOG00000066100 ##17 AABR07027872.1 (ENSRNOG00000055197) ##17 ENSRNOG00000070051 ##17 LOC100910792 (ENSRNOG00000059510) #18 Vps41 (ENSRNOG00000012940) #20 Pou6f2 (ENSRNOG00000013237) #21 AABR07027925.2 (ENSRNOG00000030925) Yae1 (ENSRNOG00000013438) #22 Rala (ENSRNOG00000013454) #23 Cdk13 (ENSRNOG00000013620) #25 Mplkip (ENSRNOG00000013806) #26 Sugct (ENSRNOG00000066247) #27 Inhba (ENSRNOG00000014320) #28 Gli3 (ENSRNOG00000014395) #29 Psme1-ps1 (ENSRNOG00000061359) Gabpb1l (ENSRNOG00000053439) RGD1308147 (ENSRNOG00000015523) #30 Psma2 (ENSRNOG00000049920) #31 Mrpl32 (ENSRNOG00000015989) #32 Hecw1 (ENSRNOG00000016046) #33 Rbbp4-ps2 (ENSRNOG00000021292) ENSRNOG00000064563 Arid4b (ENSRNOG00000016391) Upper Galilee mountains blind mole rat MODERN SPECIES 563 ENSNGAG00000012062 #21 Yae1d1 (ENSNGAG00000004879) #22 ENSNGAG00000002014 Lesser Egyptian jerboa MODERN SPECIES 161 Elmo1 (ENSJJAG00000003658) ENSJJAG00000000615 Gpr141 (ENSJJAG00000012473) Nme8 (ENSJJAG00000000267) #16 Sfrp4 (ENSJJAG00000024190) Epdr1 (ENSJJAG00000024132) Stard3nl (ENSJJAG00000023909) Amph (ENSJJAG00000022889) #18 ENSJJAG00000021910 ENSJJAG00000021560 ENSJJAG00000021435 ENSJJAG00000020912 Vps41 (ENSJJAG00000020760) #20 Pou6f2 (ENSJJAG00000020320) #21 ENSJJAG00000017234 Yae1d1 (ENSJJAG00000017087) #22 Rodentia_A ANCESTRAL SPECIES 12 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179 ENSGT00940000154390.A.j Sciuridae ANCESTRAL SPECIES 7 ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a.d ##17 ENSGT01060000248976 ENSGT00940000153143.a.b.b.a.b.d.a.c ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179 ENSGT00940000154390.A.j Marmotini ANCESTRAL SPECIES 37 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a.d.a ##17 ENSGT01060000248976.b ENSGT00940000153143.a.b.b.a.b.d.a.c.a.b ##17 ENSGT01060000248976.a ENSGT00940000153143.a.b.b.a.b.d.a.c.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00960000189879 ENSGT00390000011072 ENSGT00940000153505.a.a.c.a ENSGT00390000011179 Marmotini_b ANCESTRAL SPECIES 26 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a.d.a ##17 ENSGT01060000248976.b ENSGT00940000153143.a.b.b.a.b.d.a.c.a.b ##17 ENSGT01060000248976.a ENSGT00940000153143.a.b.b.a.b.d.a.c.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00960000189879 ENSGT00390000011072 ENSGT00940000153505.a.a.c.a ENSGT00390000011179 Arctic ground squirrel MODERN SPECIES 51 GPR141 (ENSUPAG00010002233) ENSUPAG00010002224 NME8 (ENSUPAG00010002191) #16 SFRP4 (ENSUPAG00010002173) EPDR1 (ENSUPAG00010002156) STARD3NL (ENSUPAG00010002079) ENSUPAG00010002063 ##17 ENSUPAG00010002060 ENSUPAG00010002054 ##17 ENSUPAG00010002049 ENSUPAG00010002046 ENSUPAG00010002019 ##17 AMPH (ENSUPAG00010001960) #18 VPS41 (ENSUPAG00010001930) #20 ENSUPAG00010001913 #21 YAE1 (ENSUPAG00010001890) #22 RALA (ENSUPAG00010001880) #23 CDK13 (ENSUPAG00010001813) #25 MPLKIP (ENSUPAG00010001797) #26 SUGCT (ENSUPAG00010001771) #27 Squirrel MODERN SPECIES 78 ENSSTOG00000021378 EEPD1 (ENSSTOG00000008483) ENSSTOG00000006630 ANLN (ENSSTOG00000024866) AOAH (ENSSTOG00000006686) ELMO1 (ENSSTOG00000005876) GPR141 (ENSSTOG00000014563) NME8 (ENSSTOG00000014565) #16 SFRP4 (ENSSTOG00000012692) EPDR1 (ENSSTOG00000024033) STARD3NL (ENSSTOG00000014750) ENSSTOG00000022469 AMPH (ENSSTOG00000012263) #18 VPS41 (ENSSTOG00000007343) #20 ENSSTOG00000023336 #21 YAE1 (ENSSTOG00000023547) #22 RALA (ENSSTOG00000020292) #23 CDK13 (ENSSTOG00000022568) #25 MPLKIP (ENSSTOG00000026468) #26 SUGCT (ENSSTOG00000011998) #27 ENSSTOG00000034121 #28 GLI3 (ENSSTOG00000020844) #29 C7orf25 (ENSSTOG00000027844) #30 PSMA2 (ENSSTOG00000013334) #31 MRPL32 (ENSSTOG00000013340) #32 HECW1 (ENSSTOG00000016043) #33 STK17A (ENSSTOG00000026139) #34 BLVRA (ENSSTOG00000021499) MRPS24 (ENSSTOG00000032907) URGCP (ENSSTOG00000010637) UBE2D4 (ENSSTOG00000002630) Alpin marmot MODERN SPECIES 26 SFRP4 (ENSMMMG00000011801) ENSMMMG00000011813 STARD3NL (ENSMMMG00000011818) ENSMMMG00000011826 ##17 ENSMMMG00000011836 ENSMMMG00000011838 ENSMMMG00000011841 ##17 ENSMMMG00000011847 ##17 ENSMMMG00000011859 ##17 ENSMMMG00000011872 ENSMMMG00000011878 ##17 AMPH (ENSMMMG00000011881) #18 ENSMMMG00000011913 VPS41 (ENSMMMG00000011922) #20 ENSMMMG00000011962 #21 YAE1 (ENSMMMG00000011978) #22 RALA (ENSMMMG00000011989) #23 ENSMMMG00000011996 CDK13 (ENSMMMG00000012001) #25 MPLKIP (ENSMMMG00000012038) #26 SUGCT (ENSMMMG00000012046) #27 INHBA (ENSMMMG00000012059) #28 GLI3 (ENSMMMG00000012080) #29 ENSMMMG00000012105 ENSMMMG00000012111 ENSMMMG00000012115 C7orf25 (ENSMMMG00000012127) #30 PSMA2 (ENSMMMG00000012134) #31 MRPL32 (ENSMMMG00000012145) #32 ENSMMMG00000012152 HECW1 (ENSMMMG00000012160) #33 Eurasian red squirrel MODERN SPECIES 17 ENSSVLG00005022300 NME8 (ENSSVLG00005022326) #16 SFRP4 (ENSSVLG00005022432) EPDR1 (ENSSVLG00005022455) ENSSVLG00005022493 STARD3NL (ENSSVLG00005022519) ENSSVLG00005022564 ##17 ENSSVLG00005022581 ENSSVLG00005022603 TRGV9 (ENSSVLG00005022616) ##17 ENSSVLG00005022644 ##17 AMPH (ENSSVLG00005022710) #18 VPS41 (ENSSVLG00005023041) #20 POU6F2 (ENSSVLG00005023305) #21 ENSSVLG00005023507 YAE1 (ENSSVLG00005004760) #22 RALA (ENSSVLG00005004779) #23 ENSSVLG00005004818 #25 MPLKIP (ENSSVLG00005004837) #26 SUGCT (ENSSVLG00005004898) #27 ENSSVLG00005005063 ENSSVLG00005005081 INHBA (ENSSVLG00005005151) #28 GLI3 (ENSSVLG00005005178) #29 C7orf25 (ENSSVLG00005005209) #30 PSMA2 (ENSSVLG00005005237) #31 MRPL32 (ENSSVLG00005005303) #32 ENSSVLG00005005320 HECW1 (ENSSVLG00005005468) #33 STK17A (ENSSVLG00005005990) #34 COA1 (ENSSVLG00005006028) Hystricomorpha ANCESTRAL SPECIES 17 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Hystricomorpha_a ANCESTRAL SPECIES 16 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Guinea pig MODERN SPECIES 30 MATCAP2 (ENSCPOG00000008038) ANLN (ENSCPOG00000008050) ENSCPOG00000000295 ELMO1 (ENSCPOG00000005738) GPR141 (ENSCPOG00000033831) ENSCPOG00000033172 NME8 (ENSCPOG00000010378) #16 SFRP4 (ENSCPOG00000010391) EPDR1 (ENSCPOG00000032481) STARD3NL (ENSCPOG00000004394) ENSCPOG00000024186 ##17 AMPH (ENSCPOG00000006478) #18 VPS41 (ENSCPOG00000006142) #20 ENSCPOG00000012221 #21 ENSCPOG00000036410 #21 YAE1 (ENSCPOG00000039885) #22 RALA (ENSCPOG00000037731) #23 ENSCPOG00000009938 #25 MPLKIP (ENSCPOG00000037370) #26 SUGCT (ENSCPOG00000009948) #27 ENSCPOG00000037187 #28 GLI3 (ENSCPOG00000013233) #29 C7orf25 (ENSCPOG00000013131) #30 PSMA2 (ENSCPOG00000013134) #31 MRPL32 (ENSCPOG00000034853) #32 HECW1 (ENSCPOG00000000176) #33 STK17A (ENSCPOG00000012689) #34 ENSCPOG00000037130 BLVRA (ENSCPOG00000008136) ENSCPOG00000023116 ENSCPOG00000023341 Hystricomorpha_b ANCESTRAL SPECIES 55 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00390000011072 Degu MODERN SPECIES 72 EEPD1 (ENSODEG00000007785) MATCAP2 (ENSODEG00000010906) ANLN (ENSODEG00000008115) AOAH (ENSODEG00000009152) ELMO1 (ENSODEG00000008951) NME8 (ENSODEG00000008055) #16 SFRP4 (ENSODEG00000008477) EPDR1 (ENSODEG00000008299) STARD3NL (ENSODEG00000007720) ENSODEG00000009018 ##17 ENSODEG00000010348 AMPH (ENSODEG00000010210) #18 ENSODEG00000009633 #20 ENSODEG00000007666 #20 POU6F2 (ENSODEG00000009460) #21 YAE1 (ENSODEG00000007300) #22 RALA (ENSODEG00000007864) #23 ENSODEG00000008309 #25 ENSODEG00000008104 #26 SUGCT (ENSODEG00000008687) #27 INHBA (ENSODEG00000007905) #28 GLI3 (ENSODEG00000008109) #29 C7orf25 (ENSODEG00000019542) #30 ENSODEG00000008580 #31 MRPL32 (ENSODEG00000008658) #32 HECW1 (ENSODEG00000009462) #33 STK17A (ENSODEG00000007337) #34 BLVRA (ENSODEG00000007949) RP9 (ENSODEG00000009275) NT5C3A (ENSODEG00000011094) FKBP9 (ENSODEG00000008022) Long-tailed chinchilla MODERN SPECIES 167 GPR141 (ENSCLAG00000011696) NME8 (ENSCLAG00000007392) #16 SFRP4 (ENSCLAG00000007024) EPDR1 (ENSCLAG00000006708) ENSCLAG00000006163 STARD3NL (ENSCLAG00000005709) ENSCLAG00000008127 ##17 ENSCLAG00000008044 ##17 ENSCLAG00000007605 ##17 ENSCLAG00000007481 ##17 ENSCLAG00000004875 AMPH (ENSCLAG00000004190) #18 VPS41 (ENSCLAG00000007171) #20 ENSCLAG00000006744 #21 ENSCLAG00000006621 #21 YAE1 (ENSCLAG00000006572) #22 RALA (ENSCLAG00000006479) #23 ENSCLAG00000011577 #25 MPLKIP (ENSCLAG00000011526) #26 ENSCLAG00000008555 SUGCT (ENSCLAG00000007866) #27 INHBA (ENSCLAG00000007192) #28 GLI3 (ENSCLAG00000006524) #29 C7orf25 (ENSCLAG00000006458) #30 PSMA2 (ENSCLAG00000006277) #31 MRPL32 (ENSCLAG00000016308) #32 HECW1 (ENSCLAG00000011773) #33 STK17A (ENSCLAG00000010347) #34 BLVRA (ENSCLAG00000008524) Naked mole-rat female MODERN SPECIES EPDR1 (ENSHGLG00000010611) STARD3NL (ENSHGLG00000008923) ENSHGLG00000048917 ##17 ENSHGLG00000007933 ##17 ENSHGLG00000044233 ##17 ENSHGLG00000032003 ENSHGLG00000035739 ##17 ENSHGLG00000036569 ENSHGLG00000043187 #17 ENSHGLG00000048223 ##17 ENSHGLG00000049625 ##17 AMPH (ENSHGLG00000008101) #18 VPS41 (ENSHGLG00000017533) #20 POU6F2 (ENSHGLG00000041492) #21 ENSHGLG00000044208 YAE1 (ENSHGLG00000010237) #22 RALA (ENSHGLG00000038221) #23 CDK13 (ENSHGLG00000014999) #25 MPLKIP (ENSHGLG00000032456) #26 ENSHGLG00000038133 ENSHGLG00000040910 SUGCT (ENSHGLG00000008015) #27 INHBA (ENSHGLG00000041796) #28 ENSHGLG00000050582 ENSHGLG00000038563 #29 ENSHGLG00000033405 LANCL2 (ENSHGLG00000004769) EGFR (ENSHGLG00000005749) ENSHGLG00000037511 ENSHGLG00000015702 ENSHGLG00000033610 Lagomorpha ANCESTRAL SPECIES 164 ENSGT00940000164413 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 Rabbit MODERN SPECIES 1 SFRP4 (ENSOCUG00000015877) EPDR1 (ENSOCUG00000015882) STARD3NL (ENSOCUG00000008939) ENSOCUG00000036137 #17 ENSOCUG00000039346 ##17 ENSOCUG00000034436 ##17 ENSOCUG00000039334 ##17 ENSOCUG00000025628 ##17 ENSOCUG00000031806 ##17 ENSOCUG00000025800 ##17 ENSOCUG00000032571 ##17 AMPH (ENSOCUG00000002244) #18 VPS41 (ENSOCUG00000000676) #20 POU6F2 (ENSOCUG00000013896) #21 ENSOCUG00000039486 YAE1 (ENSOCUG00000011496) #22 ENSOCUG00000016581 #23 ENSOCUG00000016583 #25 MPLKIP (ENSOCUG00000003189) #26 SUGCT (ENSOCUG00000003191) #27 ENSOCUG00000033395 INHBA (ENSOCUG00000000621) #28 GLI3 (ENSOCUG00000006563) #29 C7orf25 (ENSOCUG00000012089) #30 PSMA2 (ENSOCUG00000012092) #31 ENSOCUG00000012098 #32 HECW1 (ENSOCUG00000007994) #33 STK17A (ENSOCUG00000015953) #34 BLVRA (ENSOCUG00000006916) ENSOCUG00000008172 SCIN (ENSOCUG00000006986) Pika MODERN SPECIES 49 POU6F2 (ENSOPRG00000003744) #21 YAE1 (ENSOPRG00000003765) #22 Tree shrew MODERN SPECIES 167 POU6F2 (ENSTBEG00000010025) #21 YAE1 (ENSTBEG00000010085) #22 ENSTBEG00000010148 #23 Primates ANCESTRAL SPECIES 12 ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994.nb ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294.b #33 ENSGT00900000143452 ENSGT00940000158294.a #33 ENSGT00940000154014.a #34 ENSGT00440000033985 Lemuriformes ANCESTRAL SPECIES 4 ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994.nb ENSGT00940000155994.ob ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294.b #33 ENSGT00900000143452 ENSGT00940000158294.a #33 ENSGT00940000154014.a #34 ENSGT00440000033985 Mouse lemur MODERN SPECIES 2 PGAM2 (ENSMICG00000013345) DBNL (ENSMICG00000013311) ENSMICG00000013289 URGCP (ENSMICG00000030783) MRPS24 (ENSMICG00000043303) BLVRA (ENSMICG00000007284) COA1 (ENSMICG00000013834) STK17A (ENSMICG00000047496) #34 ENSMICG00000047051 HECW1 (ENSMICG00000001053) #33 ENSMICG00000045915 #32 PSMA2 (ENSMICG00000017286) #31 C7orf25 (ENSMICG00000017285) #30 GLI3 (ENSMICG00000010785) #29 INHBA (ENSMICG00000033429) #28 YAE1 (ENSMICG00000042079) #22 SUGCT (ENSMICG00000010769) #27 MPLKIP (ENSMICG00000037623) #26 CDK13 (ENSMICG00000044449) #25 RALA (ENSMICG00000038516) #23 ENSMICG00000012521 POU6F2 (ENSMICG00000007361) #21 VPS41 (ENSMICG00000005036) #20 AMPH (ENSMICG00000013941) #18 ENSMICG00000044287 #17 ENSMICG00000029905 ##17 ENSMICG00000000945 EPDR1 (ENSMICG00000001946) SFRP4 (ENSMICG00000026727) NME8 (ENSMICG00000001938) #16 ELMO1 (ENSMICG00000008990) Lemuriformes_a ANCESTRAL SPECIES 94 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294.b #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179 Coquerels sifaka MODERN SPECIES 593 POU6F2 (ENSPCOG00000022128) #21 YAE1 (ENSPCOG00000012495) #22 RALA (ENSPCOG00000018071) #23 ENSPCOG00000028359 CDK13 (ENSPCOG00000020869) #25 MPLKIP (ENSPCOG00000007076) #26 SUGCT (ENSPCOG00000023610) #27 INHBA (ENSPCOG00000021472) #28 GLI3 (ENSPCOG00000002002) #29 Greater bamboo lemur MODERN SPECIES 144 ENSPSMG00000022245 #20 POU6F2 (ENSPSMG00000022234) #21 YAE1 (ENSPSMG00000022220) #22 RALA (ENSPSMG00000022210) #23 ENSPSMG00000022207 CDK13 (ENSPSMG00000022180) #25 MPLKIP (ENSPSMG00000022140) #26 SUGCT (ENSPSMG00000022134) #27 INHBA (ENSPSMG00000022111) #28 Bushbaby MODERN SPECIES 234 AMPH (ENSOGAG00000000682) #18 VPS41 (ENSOGAG00000000684) #20 POU6F2 (ENSOGAG00000033061) #21 ENSOGAG00000030149 YAE1 (ENSOGAG00000010241) #22 RALA (ENSOGAG00000010244) #23 ENSOGAG00000010247 #25 MPLKIP (ENSOGAG00000014138) #26 ENSOGAG00000025676 INHBA (ENSOGAG00000003846) #28 GLI3 (ENSOGAG00000012651) #29 C7orf25 (ENSOGAG00000016804) #30 PSMA2 (ENSOGAG00000016805) #31 MRPL32 (ENSOGAG00000016806) #32 HECW1 (ENSOGAG00000013436) #33 STK17A (ENSOGAG00000033031) #34 COA1 (ENSOGAG00000006944) BLVRA (ENSOGAG00000001591) MRPS24 (ENSOGAG00000001593) URGCP (ENSOGAG00000001595) Haplorrhini ANCESTRAL SPECIES 8 ENSGT01030000234518.E.c.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Simiiformes ANCESTRAL SPECIES 12 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Platyrrhini ANCESTRAL SPECIES 10 ENSGT00940000155994 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000164413 ENSGT00940000155476 ENSGT01060000248976 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155959.m.a ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722.c #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996 #32 ENSGT00530000063426.b.b.b ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 Cebidae ANCESTRAL SPECIES 9 ENSGT00910000147859 ENSGT00390000008427 ENSGT00940000155994 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000164413 ENSGT00940000155476 ENSGT01060000248976 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155959.m.a ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722.c #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996 #32 ENSGT00910000144211.n.b ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 Marmoset MODERN SPECIES 20 NME8 (ENSCJAG00000012554) #16 SFRP4 (ENSCJAG00000069938) EPDR1 (ENSCJAG00000012617) ENSCJAG00000081501 ENSCJAG00000040400 ENSCJAG00000085013 ENSCJAG00000012635 #17 TRGV9 (ENSCJAG00000044374) ##17 ENSCJAG00000075352 ##17 AMPH (ENSCJAG00000012658) #18 ENSCJAG00000085472 ENSCJAG00000012684 VPS41 (ENSCJAG00000012686) #20 POU6F2 (ENSCJAG00000007618) #21 ENSCJAG00000074718 YAE1 (ENSCJAG00000041871) #22 RALA (ENSCJAG00000039772) #23 ENSCJAG00000077034 CDK13 (ENSCJAG00000007641) #25 MPLKIP (ENSCJAG00000007653) #26 SUGCT (ENSCJAG00000007656) #27 INHBA (ENSCJAG00000007682) #28 GLI3 (ENSCJAG00000007690) #29 C7orf25 (ENSCJAG00000007729) #30 PSMA2 (ENSCJAG00000039517) #31 MRPL32 (ENSCJAG00000007749) #32 ENSCJAG00000062733 ENSCJAG00000082260 HECW1 (ENSCJAG00000007768) #33 ENSCJAG00000078337 STK17A (ENSCJAG00000007799) #34 Cebidae_a ANCESTRAL SPECIES 7 ENSGT00390000008749.e ENSGT00910000147859 ENSGT00390000008427 ENSGT00940000155994 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000164413 ENSGT00940000155476 ENSGT01060000248976 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155959.m.a ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722.c #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996 #32 ENSGT00910000144211.n.b ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 Capuchin MODERN SPECIES 349 POU6F2 (ENSCCAG00000029778) #21 YAE1 (ENSCCAG00000028248) #22 RALA (ENSCCAG00000029848) #23 CDK13 (ENSCCAG00000032800) #25 MPLKIP (ENSCCAG00000023596) #26 SUGCT (ENSCCAG00000031138) #27 Bolivian squirrel monkey MODERN SPECIES 82 ANLN (ENSSBOG00000026014) ENSSBOG00000011698 AOAH (ENSSBOG00000035205) ELMO1 (ENSSBOG00000030050) NME8 (ENSSBOG00000023157) #16 SFRP4 (ENSSBOG00000030016) EPDR1 (ENSSBOG00000033388) ENSSBOG00000024726 ENSSBOG00000026023 ENSSBOG00000019808 ENSSBOG00000020164 ##17 AMPH (ENSSBOG00000026809) #18 ENSSBOG00000030272 VPS41 (ENSSBOG00000033706) #20 POU6F2 (ENSSBOG00000029519) #21 YAE1 (ENSSBOG00000032607) #22 ENSSBOG00000032600 RALA (ENSSBOG00000021115) #23 ENSSBOG00000031315 #25 MPLKIP (ENSSBOG00000003418) #26 SUGCT (ENSSBOG00000030111) #27 INHBA (ENSSBOG00000021061) #28 GLI3 (ENSSBOG00000020504) #29 ENSSBOG00000033820 #30 PSMA2 (ENSSBOG00000019977) #31 MRPL32 (ENSSBOG00000029277) #32 ENSSBOG00000023091 ENSSBOG00000031237 HECW1 (ENSSBOG00000022224) #33 STK17A (ENSSBOG00000022665) #34 COA1 (ENSSBOG00000023098) Mas night monkey MODERN SPECIES 1103 LMOD3 (ENSANAG00000020335) ARL6IP5 (ENSANAG00000021456) ENSANAG00000035877 TMF1 (ENSANAG00000037546) EOGT (ENSANAG00000030876) TAFA4 (ENSANAG00000020763) TAFA1 (ENSANAG00000028819) SUCLG2 (ENSANAG00000033664) KBTBD8 (ENSANAG00000032012) LRIG1 (ENSANAG00000020533) SLC25A26 (ENSANAG00000034578) AMPH (ENSANAG00000023088) #18 ENSANAG00000001067 VPS41 (ENSANAG00000027607) #20 POU6F2 (ENSANAG00000032939) #21 YAE1 (ENSANAG00000037569) #22 ENSANAG00000022924 RALA (ENSANAG00000030583) #23 CDK13 (ENSANAG00000019746) #25 MPLKIP (ENSANAG00000035918) #26 SUGCT (ENSANAG00000025338) #27 INHBA (ENSANAG00000022627) #28 GLI3 (ENSANAG00000033410) #29 C7orf25 (ENSANAG00000029268) #30 PSMA2 (ENSANAG00000038426) #31 MRPL32 (ENSANAG00000036260) #32 ENSANAG00000025842 HECW1 (ENSANAG00000033887) #33 STK17A (ENSANAG00000034563) #34 COA1 (ENSANAG00000038164) BLVRA (ENSANAG00000021982) Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a.c.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00940000153143.a.a.e.a.c.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142.j #23 ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a.c.b ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00940000153143.a.a.e.a.c.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155959.l ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Hominidae ANCESTRAL SPECIES 11 ENSGT01030000234518.E.c.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a.d ##17 ENSGT00940000153143.a.a.e.a.c.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155959.l ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 25 ENSGT00390000009359.a.h ENSGT01030000234518.E.c.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000164413 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a.d ##17 ENSGT00940000153143.a.a.e.a.c.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155959.l ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Homo/Pan group ANCESTRAL SPECIES 24 ENSGT00390000008427.f ENSGT00940000155994 ENSGT00390000009359.a.h ENSGT01030000234518.E.c.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000164413 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a.c.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155959.l ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Pan ANCESTRAL SPECIES 102 ENSGT00390000011176 #22 ENSGT00940000155959.l Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 557 ENSPTRG00000042980 #22 ENSPTRG00000051971 Chimpanzee MODERN SPECIES 20 GCK (ENSPTRG00000019140) MYL7 (ENSPTRG00000019139) POLD2 (ENSPTRG00000019138) AEBP1 (ENSPTRG00000019137) POLM (ENSPTRG00000048404) ENSPTRG00000043134 DBNL (ENSPTRG00000019134) POLD2 (ENSPTRG00000046411) ENSPTRG00000052352 POLM (ENSPTRG00000019136) ENSPTRG00000051032 ENSPTRG00000047759 ENSPTRG00000050290 ENSPTRG00000028448 ENSPTRG00000039836 YAE1 (ENSPTRG00000019106) #22 ENSPTRG00000052776 RALA (ENSPTRG00000019108) #23 ENSPTRG00000050507 ENSPTRG00000034205 CDK13 (ENSPTRG00000019112) #25 MPLKIP (ENSPTRG00000019113) #26 SUGCT (ENSPTRG00000019114) #27 INHBA (ENSPTRG00000044337) #28 GLI3 (ENSPTRG00000019117) #29 ENSPTRG00000046687 C7H7orf25 (ENSPTRG00000023354) #30 PSMA2 (ENSPTRG00000019120) #31 MRPL32 (ENSPTRG00000019121) #32 HECW1 (ENSPTRG00000019123) #33 ENSPTRG00000050263 Bonobo MODERN SPECIES 276 ENSPPAG00000027234 #22 ENSPPAG00000009357 Human MODERN SPECIES 19 TRGJ1 (ENSG00000211690) TRGJP (ENSG00000211691) TRGJP1 (ENSG00000211692) TRGV11 (ENSG00000211693) ##17 TRGV10 (ENSG00000211694) ##17 TRGV9 (ENSG00000211695) ##17 TRGV8 (ENSG00000211696) ##17 TRGV5 (ENSG00000211697) ##17 TRGV4 (ENSG00000211698) ##17 TRGV3 (ENSG00000211699) ##17 TRGV2 (ENSG00000233306) ##17 TRGV1 (ENSG00000211701) ##17 AMPH (ENSG00000078053) #18 VPS41 (ENSG00000006715) #20 POU6F2 (ENSG00000106536) #21 YAE1 (ENSG00000241127) #22 RALA (ENSG00000006451) #23 CDK13 (ENSG00000065883) #25 MPLKIP (ENSG00000168303) #26 SUGCT (ENSG00000175600) #27 INHBA (ENSG00000122641) #28 GLI3 (ENSG00000106571) #29 C7orf25 (ENSG00000136197) #30 ENSG00000256646 PSMA2 (ENSG00000106588) #31 MRPL32 (ENSG00000106591) #32 HECW1 (ENSG00000002746) #33 STK17A (ENSG00000164543) #34 COA1 (ENSG00000106603) BLVRA (ENSG00000106605) MRPS24 (ENSG00000062582) Gorilla MODERN SPECIES 20 ENSGGOG00000004195 ELMO1 (ENSGGOG00000016941) ENSGGOG00000024680 NME8 (ENSGGOG00000007442) #16 SFRP4 (ENSGGOG00000022312) ENSGGOG00000000417 STARD3NL (ENSGGOG00000013471) TRGV10 (ENSGGOG00000039270) ##17 TRGV9 (ENSGGOG00000037452) ##17 ENSGGOG00000041674 ##17 ENSGGOG00000042829 ##17 AMPH (ENSGGOG00000010988) #18 ENSGGOG00000036763 VPS41 (ENSGGOG00000006665) #20 POU6F2 (ENSGGOG00000006718) #21 YAE1 (ENSGGOG00000006725) #22 ENSGGOG00000039686 ENSGGOG00000041831 ENSGGOG00000043450 ENSGGOG00000006834 CDK13 (ENSGGOG00000007884) #25 MPLKIP (ENSGGOG00000041032) #26 SUGCT (ENSGGOG00000034863) #27 INHBA (ENSGGOG00000042209) #28 GLI3 (ENSGGOG00000002026) #29 ENSGGOG00000027255 ENSGGOG00000037303 C7orf25 (ENSGGOG00000002250) #30 PSMA2 (ENSGGOG00000006538) #31 MRPL32 (ENSGGOG00000027492) #32 HECW1 (ENSGGOG00000024448) #33 Orangutan MODERN SPECIES 20 ENSPPYG00000039649 ENSPPYG00000034845 ENSPPYG00000041693 ##17 ENSPPYG00000039143 ENSPPYG00000017625 ##17 ENSPPYG00000035429 ##17 ENSPPYG00000034194 ##17 ENSPPYG00000032682 ##17 ENSPPYG00000037594 ##17 ENSPPYG00000037818 ##17 ENSPPYG00000030711 ##17 ENSPPYG00000033370 ##17 AMPH (ENSPPYG00000017623) #18 VPS41 (ENSPPYG00000017621) #20 POU6F2 (ENSPPYG00000029778) #21 YAE1 (ENSPPYG00000035738) #22 RALA (ENSPPYG00000017619) #23 CDK13 (ENSPPYG00000017618) #25 MPLKIP (ENSPPYG00000017617) #26 SUGCT (ENSPPYG00000017615) #27 INHBA (ENSPPYG00000038204) #28 GLI3 (ENSPPYG00000017613) #29 C7orf25 (ENSPPYG00000034147) #30 PSMA2 (ENSPPYG00000030380) #31 MRPL32 (ENSPPYG00000017611) #32 HECW1 (ENSPPYG00000017608) #33 STK17A (ENSPPYG00000017607) #34 COA1 (ENSPPYG00000017606) BLVRA (ENSPPYG00000017605) MRPS24 (ENSPPYG00000017604) URGCP (ENSPPYG00000017603) Gibbon MODERN SPECIES 7 ELMO1 (ENSNLEG00000002372) ENSNLEG00000033801 NME8 (ENSNLEG00000002555) #16 SFRP4 (ENSNLEG00000034263) EPDR1 (ENSNLEG00000029788) STARD3NL (ENSNLEG00000034855) ENSNLEG00000030988 ##17 ENSNLEG00000029674 ##17 ENSNLEG00000030425 ##17 ENSNLEG00000028134 ##17 ENSNLEG00000027199 ##17 AMPH (ENSNLEG00000002797) #18 VPS41 (ENSNLEG00000002939) #20 POU6F2 (ENSNLEG00000003036) #21 ENSNLEG00000029534 YAE1 (ENSNLEG00000032479) #22 RALA (ENSNLEG00000003055) #23 CDK13 (ENSNLEG00000003097) #25 MPLKIP (ENSNLEG00000028028) #26 SUGCT (ENSNLEG00000003120) #27 INHBA (ENSNLEG00000003153) #28 GLI3 (ENSNLEG00000003160) #29 C7orf25 (ENSNLEG00000003174) #30 ENSNLEG00000027384 PSMA2 (ENSNLEG00000003177) #31 MRPL32 (ENSNLEG00000027404) #32 HECW1 (ENSNLEG00000003209) #33 ENSNLEG00000035608 STK17A (ENSNLEG00000003304) #34 COA1 (ENSNLEG00000003316) BLVRA (ENSNLEG00000003333) Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476.g ENSGT01050000245171 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.b ##17 ENSGT00940000153143.a.a.e.a.c.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00940000153339.a.a.b.a ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142.j #23 ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000161910 ENSGT00940000155476.g ENSGT01050000245171 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.b.b ##17 ENSGT00940000153143.a.a.e.a.c.b ##17 ENSGT00940000153143.a.a.e.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00940000153339.a.a.b.a ENSGT00390000006224.i.b ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142.j #23 ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00940000155476.g ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT01050000245171 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.b.b ##17 ENSGT00940000153143.a.a.e.a.c.b ##17 ENSGT00940000153143.a.a.e.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00940000153339.a.a.b.a ENSGT00390000006224.i.b ENSGT00960000187337 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142.i.b #23 ENSGT01040000241441 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476.g ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT01050000245171 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00940000153339.a.a.b.a ENSGT00390000006224.i.b ENSGT00960000187337 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142.j #23 ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Olive baboon MODERN SPECIES 14 EPDR1 (ENSPANG00000006302) ENSPANG00000051311 STARD3NL (ENSPANG00000016262) ENSPANG00000050429 ##17 ENSPANG00000050953 ENSPANG00000044618 ##17 TRGV10 (ENSPANG00000013675) ##17 ENSPANG00000037204 ENSPANG00000049083 TRGV9 (ENSPANG00000001237) ##17 ENSPANG00000037866 ENSPANG00000043792 ##17 AMPH (ENSPANG00000013001) #18 VPS41 (ENSPANG00000003773) #20 POU6F2 (ENSPANG00000007998) #21 YAE1 (ENSPANG00000001303) #22 RALA (ENSPANG00000022183) #23 ENSPANG00000049728 CDK13 (ENSPANG00000022842) #25 MPLKIP (ENSPANG00000003774) #26 SUGCT (ENSPANG00000006854) #27 ENSPANG00000050783 ENSPANG00000040486 ENSPANG00000047702 ENSPANG00000041607 INHBA (ENSPANG00000000357) #28 GLI3 (ENSPANG00000014545) #29 ENSPANG00000050641 ENSPANG00000041647 C7orf25 (ENSPANG00000040755) #30 PSMA2 (ENSPANG00000007348) #31 Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476.g ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT01050000245171 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00940000153339.a.a.b.a ENSGT00390000006224.i.b ENSGT00960000187337 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT01040000241441 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 Sooty mangabey MODERN SPECIES 98 GPR141 (ENSCATG00000020413) NME8 (ENSCATG00000032975) #16 SFRP4 (ENSCATG00000035306) EPDR1 (ENSCATG00000029310) ENSCATG00000036966 ENSCATG00000021274 ##17 ENSCATG00000020969 ENSCATG00000021442 ##17 TRGV10 (ENSCATG00000018935) ##17 TRGV9 (ENSCATG00000020585) ##17 AMPH (ENSCATG00000019532) #18 ENSCATG00000033561 ENSCATG00000019163 VPS41 (ENSCATG00000042558) #20 POU6F2 (ENSCATG00000044154) #21 YAE1 (ENSCATG00000042398) #22 RALA (ENSCATG00000028248) #23 ENSCATG00000039454 CDK13 (ENSCATG00000036583) #25 MPLKIP (ENSCATG00000042621) #26 SUGCT (ENSCATG00000039409) #27 Drill MODERN SPECIES 67 NME8 (ENSMLEG00000032939) #16 SFRP4 (ENSMLEG00000024196) EPDR1 (ENSMLEG00000036271) ENSMLEG00000030425 ENSMLEG00000018415 ##17 ENSMLEG00000027810 ENSMLEG00000025347 ##17 TRGV10 (ENSMLEG00000003998) ##17 TRGV9 (ENSMLEG00000024000) ##17 AMPH (ENSMLEG00000037087) #18 ENSMLEG00000038996 ENSMLEG00000038796 ENSMLEG00000022266 VPS41 (ENSMLEG00000039545) #20 POU6F2 (ENSMLEG00000023024) #21 YAE1 (ENSMLEG00000031449) #22 ENSMLEG00000043351 RALA (ENSMLEG00000029414) #23 ENSMLEG00000041130 #25 MPLKIP (ENSMLEG00000044196) #26 Macaca ANCESTRAL SPECIES 3 ENSGT01050000245171.b ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT01050000245171.a ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.b.b ##17 ENSGT00940000153143.a.a.e.a.c.b ##17 ENSGT00940000153143.a.a.e.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00940000153339.a.a.b.a ENSGT00390000006224.i.b ENSGT00960000187337 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142.i.b #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00550000074878.`b.b ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000163323.c.a ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 Pig-tailed macaque MODERN SPECIES 261 SFRP4 (ENSMNEG00000038474) EPDR1 (ENSMNEG00000002935) ENSMNEG00000034363 ENSMNEG00000037797 ENSMNEG00000037726 ##17 ENSMNEG00000037795 ENSMNEG00000037608 ##17 TRGV10 (ENSMNEG00000002398) ##17 TRGV9 (ENSMNEG00000027970) ##17 AMPH (ENSMNEG00000032575) #18 ENSMNEG00000030841 ENSMNEG00000030066 ENSMNEG00000037722 VPS41 (ENSMNEG00000033123) #20 POU6F2 (ENSMNEG00000031528) #21 YAE1 (ENSMNEG00000040830) #22 RALA (ENSMNEG00000028965) #23 CDK13 (ENSMNEG00000040720) #25 MPLKIP (ENSMNEG00000030853) #26 SUGCT (ENSMNEG00000039404) #27 Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000155476.g ENSGT01050000245171.a ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT01030000240114 ENSGT01050000245171.b ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00960000190982 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.b.b ##17 ENSGT00940000153143.a.a.e.a.c.b ##17 ENSGT00940000153143.a.a.e.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142.i.b #23 ENSGT01100000263539.b.a.a.a.a.b.b.a.b.a.a ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870.b.nc #31 ENSGT00390000014996.y #32 ENSGT00940000163323.c.a ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 Rhesus MODERN SPECIES 13 ENSMMUG00000062946 ENSMMUG00000054077 ##17 ENSMMUG00000063974 ENSMMUG00000060806 ENSMMUG00000063169 ##17 ENSMMUG00000054749 TRGV10 (ENSMMUG00000059649) ##17 TRGV9 (ENSMMUG00000052981) ##17 ENSMMUG00000054501 ##17 ENSMMUG00000060606 ##17 AMPH (ENSMMUG00000023667) #18 VPS41 (ENSMMUG00000010042) #20 ENSMMUG00000051801 ENSMMUG00000050009 POU6F2 (ENSMMUG00000017106) #21 YAE1 (ENSMMUG00000013563) #22 ENSMMUG00000050440 RALA (ENSMMUG00000050621) #23 ENSMMUG00000052918 CDK13 (ENSMMUG00000018064) #25 MPLKIP (ENSMMUG00000054607) #26 ENSMMUG00000065307 SUGCT (ENSMMUG00000001702) #27 ENSMMUG00000054924 INHBA (ENSMMUG00000061466) #28 GLI3 (ENSMMUG00000013614) #29 ENSMMUG00000052530 ENSMMUG00000051741 C3H7orf25 (ENSMMUG00000022449) #30 PSMA2 (ENSMMUG00000022451) #31 MRPL32 (ENSMMUG00000060273) #32 Crab-eating macaque MODERN SPECIES 13 ENSMFAG00000052572 ENSMFAG00000052846 ENSMFAG00000058050 ##17 ENSMFAG00000059928 TRGV10 (ENSMFAG00000030135) ##17 TRGV9 (ENSMFAG00000030318) ##17 ENSMFAG00000052827 ##17 ENSMFAG00000048242 ##17 ENSMFAG00000058033 ##17 ENSMFAG00000054044 AMPH (ENSMFAG00000000228) #18 ENSMFAG00000048709 ENSMFAG00000060851 VPS41 (ENSMFAG00000041501) #20 POU6F2 (ENSMFAG00000035869) #21 YAE1 (ENSMFAG00000030308) #22 RALA (ENSMFAG00000001704) #23 ENSMFAG00000050186 ENSMFAG00000057338 ENSMFAG00000058593 ENSMFAG00000000645 #25 MPLKIP (ENSMFAG00000045608) #26 SUGCT (ENSMFAG00000043400) #27 INHBA (ENSMFAG00000054517) #28 ENSMFAG00000057391 #29 ENSMFAG00000056967 C7orf25 (ENSMFAG00000027286) #30 PSMA2 (ENSMFAG00000032277) #31 MRPL32 (ENSMFAG00000041218) #32 ENSMFAG00000056799 HECW1 (ENSMFAG00000003543) #33 Vervet Monkey MODERN SPECIES 13 NME8 (ENSCSAG00000015075) #16 SFRP4 (ENSCSAG00000015084) EPDR1 (ENSCSAG00000015088) STARD3NL (ENSCSAG00000015104) ENSCSAG00000015134 ##17 TRGV10 (ENSCSAG00000015141) ##17 TRGV9 (ENSCSAG00000015146) ##17 ENSCSAG00000015150 ##17 ENSCSAG00000015152 ##17 ENSCSAG00000015163 ##17 AMPH (ENSCSAG00000015175) #18 ENSCSAG00000019602 VPS41 (ENSCSAG00000015187) #20 POU6F2 (ENSCSAG00000015201) #21 ENSCSAG00000019601 YAE1 (ENSCSAG00000015211) #22 RALA (ENSCSAG00000015217) #23 CDK13 (ENSCSAG00000015259) #25 MPLKIP (ENSCSAG00000015281) #26 SUGCT (ENSCSAG00000015289) #27 ENSCSAG00000019600 INHBA (ENSCSAG00000015294) #28 GLI3 (ENSCSAG00000015361) #29 ENSCSAG00000019599 ENSCSAG00000015385 C7orf25 (ENSCSAG00000015390) #30 PSMA2 (ENSCSAG00000015394) #31 ENSCSAG00000015403 #32 HECW1 (ENSCSAG00000015421) #33 STK17A (ENSCSAG00000015428) #34 COA1 (ENSCSAG00000015432) Rhinopithecus ANCESTRAL SPECIES 306 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a.c.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00940000153339.a.a.b.a ENSGT00390000006224.i.b.c ENSGT00390000000481 #20 ENSGT00390000004524.c.a.a.a.b.f ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000170592 ENSGT00940000155142.i.b #23 ENSGT01040000241441 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866.c #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 Golden snub-nosed monkey MODERN SPECIES 1141 ENSRROG00000011911 #18 ENSRROG00000035173 ENSRROG00000032501 VPS41 (ENSRROG00000037254) #20 ENSRROG00000036412 POU6F2 (ENSRROG00000035258) #21 YAE1 (ENSRROG00000039482) #22 ENSRROG00000041289 RALA (ENSRROG00000039058) #23 ENSRROG00000035116 CDK13 (ENSRROG00000021528) #25 MPLKIP (ENSRROG00000031838) #26 ENSRROG00000033340 #27 ENSRROG00000009684 INHBA (ENSRROG00000034770) #28 GLI3 (ENSRROG00000035040) #29 Black snub-nosed monkey MODERN SPECIES 211 TRGV10 (ENSRBIG00000018810) ##17 TRGV9 (ENSRBIG00000004156) ##17 AMPH (ENSRBIG00000043999) #18 ENSRBIG00000036614 ENSRBIG00000035101 ENSRBIG00000005517 VPS41 (ENSRBIG00000042579) #20 ENSRBIG00000032543 POU6F2 (ENSRBIG00000030181) #21 YAE1 (ENSRBIG00000040664) #22 ENSRBIG00000039338 RALA (ENSRBIG00000039597) #23 ENSRBIG00000024978 CDK13 (ENSRBIG00000039699) #25 MPLKIP (ENSRBIG00000043237) #26 ENSRBIG00000030763 #27 ENSRBIG00000039916 INHBA (ENSRBIG00000034433) #28 GLI3 (ENSRBIG00000037773) #29 ENSRBIG00000038202 Tarsier MODERN SPECIES 3728 ECHDC2 (ENSTSYG00000029252) ZYG11A (ENSTSYG00000002797) RHBDD2 (ENSTSYG00000035635) ENSTSYG00000035665 YAE1D1 (ENSTSYG00000002132) #22 RALA (ENSTSYG00000030400) #23 Laurasiatheria ANCESTRAL SPECIES 29 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000011176 #22 Hedgehog MODERN SPECIES 13704 YAE1 (ENSEEUG00000015496) #22 Common shrew MODERN SPECIES 12038 YAE1 (ENSSARG00000010336) #22 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.a.f.e.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.a.f.f ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 Suina ANCESTRAL SPECIES 19 ENSGT00390000016226 ENSGT00390000006479 ENSGT00510000050353 ENSGT00940000162476 ENSGT00940000162620 ENSGT00940000155829.i ENSGT00940000162497 ENSGT00390000006211 ENSGT00940000161747 ENSGT00940000155153.B ENSGT00940000162942 ENSGT00940000162364 ENSGT00940000161885 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 898 ZNF467 (ENSCWAG00000008368) KRBA1 (ENSCWAG00000008095) ZNF746 (ENSCWAG00000007990) ZNF777 (ENSCWAG00000007946) ZNF783 (ENSCWAG00000007923) ZNF212 (ENSCWAG00000007892) ENSCWAG00000007860 ZNF282 (ENSCWAG00000007766) VPS41 (ENSCWAG00000007522) #20 POU6F2 (ENSCWAG00000007309) #21 ENSCWAG00000007273 #22 RALA (ENSCWAG00000007246) #23 CDK13 (ENSCWAG00000007203) #25 MPLKIP (ENSCWAG00000007188) #26 SUGCT (ENSCWAG00000007038) #27 INHBA (ENSCWAG00000007021) #28 GLI3 (ENSCWAG00000006996) #29 C7orf25 (ENSCWAG00000006982) #30 PSMA2 (ENSCWAG00000006930) #31 MRPL32 (ENSCWAG00000006907) #32 HECW1 (ENSCWAG00000006585) #33 ENSCWAG00000006541 STK17A (ENSCWAG00000006512) #34 COA1 (ENSCWAG00000006493) BLVRA (ENSCWAG00000006473) POLM (ENSCWAG00000006436) Chacoan peccary MODERN SPECIES 80 ENSCWAG00000002147 ENSCWAG00000002137 ENSCWAG00000002128 ENSCWAG00000002120 ENSCWAG00000002115 OR8D1 (ENSCWAG00000002103) OR8D2 (ENSCWAG00000002095) ENSCWAG00000002088 ENSCWAG00000002084 ENSCWAG00000002073 ENSCWAG00000002061 ENSCWAG00000002052 ENSCWAG00000002045 OR8B4 (ENSCWAG00000002035) OR8B8 (ENSCWAG00000002026) ENSCWAG00000002023 #22 ENSCWAG00000002016 ENSCWAG00000001995 OR8B12 (ENSCWAG00000001989) ENSCWAG00000001980 PANX3 (ENSCWAG00000001968) TBRG1 (ENSCWAG00000001948) SIAE (ENSCWAG00000001932) SPA17 (ENSCWAG00000001919) NRGN (ENSCWAG00000001910) VSIG2 (ENSCWAG00000001898) ESAM (ENSCWAG00000001883) MSANTD2 (ENSCWAG00000001858) ROBO3 (ENSCWAG00000001801) ROBO4 (ENSCWAG00000001739) HEPACAM (ENSCWAG00000001721) Pig MODERN SPECIES 9 RARRES2 (ENSSSCG00000035419) ENSSSCG00000040690 LRRC61 (ENSSSCG00000061542) ATP6V0E2 (ENSSSCG00000055239) ZNF862 (ENSSSCG00000040257) ENSSSCG00000039661 ZNF467 (ENSSSCG00000039041) KRBA1 (ENSSSCG00000034873) ENSSSCG00000056306 ZNF777 (ENSSSCG00000016775) ZNF783 (ENSSSCG00000031870) ZNF212 (ENSSSCG00000016773) ENSSSCG00000055672 VPS41 (ENSSSCG00000016772) #20 POU6F2 (ENSSSCG00000037764) #21 YAE1 (ENSSSCG00000030497) #22 RALA (ENSSSCG00000048439) #23 CDK13 (ENSSSCG00000016769) #25 MPLKIP (ENSSSCG00000016768) #26 SUGCT (ENSSSCG00000035581) #27 INHBA (ENSSSCG00000035077) #28 GLI3 (ENSSSCG00000016763) #29 C7orf25 (ENSSSCG00000016760) #30 PSMA2 (ENSSSCG00000039582) #31 ENSSSCG00000025060 #32 HECW1 (ENSSSCG00000036443) #33 ENSSSCG00000040496 STK17A (ENSSSCG00000016758) #34 ENSSSCG00000027491 BLVRA (ENSSSCG00000016756) POLM (ENSSSCG00000016755) Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.a.f.e.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.a.f.f ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b ##17 ENSGT00940000153143.a.a.f.e.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.a.b.d.b.b.g ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 Cetacea ANCESTRAL SPECIES 13 ENSGT00550000074844 ENSGT00940000156003 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.b.g ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00390000010089.e.a ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.q #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 Odontoceti ANCESTRAL SPECIES 12 ENSGT00510000047522 ENSGT01070000253775.a.d.a.a.a.b ENSGT00550000074844 ENSGT00940000156003 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00390000010089.e.a ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.q #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 Odontoceti_a ANCESTRAL SPECIES 13 ENSGT01070000253775.a.d.a.a.a.a ENSGT00510000047522 ENSGT01070000253775.a.d.a.a.a.b ENSGT00550000074844.e ENSGT00940000156003 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.q #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 ENSGT00940000158323 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00550000074844.e ENSGT00940000156003 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.b.g ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000154937.n.b.a ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.q #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 ENSGT00940000158323 Monodontidae ANCESTRAL SPECIES 12 ENSGT00550000074844.e ENSGT00940000156003 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.b.g ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000154937.n.b.a ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.q #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 ENSGT00940000158323 Narwhal MODERN SPECIES 306 ENSMMNG00015013268 LAMB1 (ENSMMNG00015013160) ENSMMNG00015013081 NRCAM (ENSMMNG00015012839) ENSMMNG00015012715 #16 PNPLA8 (ENSMMNG00015012688) SFRP4 (ENSMMNG00015012664) EPDR1 (ENSMMNG00015012643) STARD3NL (ENSMMNG00015012620) ENSMMNG00015012608 ##17 TRGV9 (ENSMMNG00015012603) ##17 AMPH (ENSMMNG00015012588) #18 VPS41 (ENSMMNG00015012514) #20 ENSMMNG00015012432 POU6F2 (ENSMMNG00015012404) #21 YAE1 (ENSMMNG00015012376) #22 ENSMMNG00015012353 RALA (ENSMMNG00015012334) #23 CDK13 (ENSMMNG00015012288) #25 MPLKIP (ENSMMNG00015012269) #26 SUGCT (ENSMMNG00015012249) #27 INHBA (ENSMMNG00015012234) #28 GLI3 (ENSMMNG00015012212) #29 C7orf25 (ENSMMNG00015012199) #30 PSMA2 (ENSMMNG00015012176) #31 ENSMMNG00015012161 #32 HECW1 (ENSMMNG00015012084) #33 STK17A (ENSMMNG00015012037) #34 COA1 (ENSMMNG00015012011) BLVRA (ENSMMNG00015011986) POLM (ENSMMNG00015011889) Beluga whale MODERN SPECIES 17 SLC26A3 (ENSDLEG00000001327) ENSDLEG00000001603 LAMB1 (ENSDLEG00000001755) NRCAM (ENSDLEG00000002187) PNPLA8 (ENSDLEG00000003929) ENSDLEG00000003945 #16 SFRP4 (ENSDLEG00000003959) EPDR1 (ENSDLEG00000003987) STARD3NL (ENSDLEG00000003993) ENSDLEG00000004009 ##17 TRGV9 (ENSDLEG00000004015) ##17 AMPH (ENSDLEG00000004019) #18 VPS41 (ENSDLEG00000004033) #20 POU6F2 (ENSDLEG00000004053) #21 ENSDLEG00000004072 YAE1D1 (ENSDLEG00000004079) #22 RALA (ENSDLEG00000004089) #23 CDK13 (ENSDLEG00000004120) #25 MPLKIP (ENSDLEG00000004129) #26 SUGCT (ENSDLEG00000004144) #27 INHBA (ENSDLEG00000004199) #28 GLI3 (ENSDLEG00000004234) #29 CUNH7orf25 (ENSDLEG00000004273) #30 PSMA2 (ENSDLEG00000004285) #31 MRPL32 (ENSDLEG00000004297) #32 HECW1 (ENSDLEG00000004308) #33 STK17A (ENSDLEG00000004330) #34 COA1 (ENSDLEG00000004335) BLVRA (ENSDLEG00000004351) POLM (ENSDLEG00000004372) AEBP1 (ENSDLEG00000004426) Vaquita MODERN SPECIES 20 ENSPSNG00000004749 LAMB1 (ENSPSNG00000004801) NRCAM (ENSPSNG00000005031) PNPLA8 (ENSPSNG00000005209) ENSPSNG00000005245 ENSPSNG00000005266 #16 SFRP4 (ENSPSNG00000005311) EPDR1 (ENSPSNG00000005343) STARD3NL (ENSPSNG00000005380) ENSPSNG00000005418 ##17 TRGV9 (ENSPSNG00000005429) ##17 AMPH (ENSPSNG00000005476) #18 VPS41 (ENSPSNG00000005623) #20 POU6F2 (ENSPSNG00000005694) #21 ENSPSNG00000005765 YAE1 (ENSPSNG00000005783) #22 ENSPSNG00000005805 RALA (ENSPSNG00000005824) #23 CDK13 (ENSPSNG00000005890) #25 MPLKIP (ENSPSNG00000005962) #26 SUGCT (ENSPSNG00000006038) #27 INHBA (ENSPSNG00000006133) #28 GLI3 (ENSPSNG00000006154) #29 C7orf25 (ENSPSNG00000006173) #30 PSMA2 (ENSPSNG00000006196) #31 ENSPSNG00000006232 #32 HECW1 (ENSPSNG00000006347) #33 STK17A (ENSPSNG00000006610) #34 ENSPSNG00000006640 BLVRA (ENSPSNG00000006663) POLM (ENSPSNG00000006694) Dolphin MODERN SPECIES 3306 POU6F2 (ENSTTRG00000010646) #21 YAE1 (ENSTTRG00000010650) #22 RALA (ENSTTRG00000010652) #23 Sperm whale MODERN SPECIES 16 DLD (ENSPCTG00005003576) LAMB1 (ENSPCTG00005003613) NRCAM (ENSPCTG00005003750) PNPLA8 (ENSPCTG00005004055) ENSPCTG00005004079 ENSPCTG00005004084 #16 SFRP4 (ENSPCTG00005004100) EPDR1 (ENSPCTG00005004105) STARD3NL (ENSPCTG00005004119) ENSPCTG00005004146 ##17 TRGV9 (ENSPCTG00005004157) ##17 AMPH (ENSPCTG00005004186) #18 VPS41 (ENSPCTG00005004357) #20 ENSPCTG00005004493 ENSPCTG00005004517 #21 YAE1 (ENSPCTG00005004539) #22 ENSPCTG00005004553 RALA (ENSPCTG00005004575) #23 CDK13 (ENSPCTG00005004628) #25 MPLKIP (ENSPCTG00005004756) #26 SUGCT (ENSPCTG00005004779) #27 ENSPCTG00005004799 INHBA (ENSPCTG00005004805) #28 GLI3 (ENSPCTG00005004827) #29 PSMA2 (ENSPCTG00005004869) #31 MRPL32 (ENSPCTG00005004935) #32 HECW1 (ENSPCTG00005004997) #33 STK17A (ENSPCTG00005005297) #34 COA1 (ENSPCTG00005005324) BLVRA (ENSPCTG00005005350) AEBP1 (ENSPCTG00005005498) Blue whale DUPLICATION Blue whale MODERN SPECIES 20 LAMB1 (ENSBMSG00010007213) NRCAM (ENSBMSG00010007300) PNPLA8 (ENSBMSG00010007530) ENSBMSG00010007569 NME8 (ENSBMSG00010007585) #16 SFRP4 (ENSBMSG00010007619) EPDR1 (ENSBMSG00010007630) STARD3NL (ENSBMSG00010007649) ENSBMSG00010007675 ##17 ENSBMSG00010007727 ##17 TRGV9 (ENSBMSG00010007735) ##17 AMPH (ENSBMSG00010007773) #18 VPS41 (ENSBMSG00010007891) #20 POU6F2 (ENSBMSG00010007920) #21 ENSBMSG00010007967 ENSBMSG00010007978 #22 RALA (ENSBMSG00010007998) #23 CDK13 (ENSBMSG00010008022) #25 MPLKIP (ENSBMSG00010008105) #26 SUGCT (ENSBMSG00010008128) #27 ENSBMSG00010008170 INHBA (ENSBMSG00010008174) #28 GLI3 (ENSBMSG00010008182) #29 C7orf25 (ENSBMSG00010008192) #30 PSMA2 (ENSBMSG00010008200) #31 ENSBMSG00010008215 #32 ENSBMSG00010008222 HECW1 (ENSBMSG00010008240) #33 STK17A (ENSBMSG00010008340) #34 COA1 (ENSBMSG00010008357) BLVRA (ENSBMSG00010008368) Blue whale MODERN SPECIES 18 NYAP2 (ENSBMSG00010002939) ENSBMSG00010002950 IRS1 (ENSBMSG00010002959) RHBDD1 (ENSBMSG00010002962) ENSBMSG00010002968 COL4A4 (ENSBMSG00010002977) COL4A3 (ENSBMSG00010003041) ENSBMSG00010003122 TM4SF20 (ENSBMSG00010003234) AGFG1 (ENSBMSG00010003307) ENSBMSG00010003632 ENSBMSG00010003644 ENSBMSG00010003649 ENSBMSG00010003655 ENSBMSG00010003663 ENSBMSG00010003672 #22 CCL20 (ENSBMSG00010003686) DAW1 (ENSBMSG00010003700) SPHKAP (ENSBMSG00010003729) PID1 (ENSBMSG00010003756) DNER (ENSBMSG00010003780) ENSBMSG00010003793 TRIP12 (ENSBMSG00010003831) FBXO36 (ENSBMSG00010003905) ENSBMSG00010003918 SLC16A14 (ENSBMSG00010000190) ENSBMSG00010000219 ENSBMSG00010000251 SP140 (ENSBMSG00010000276) ENSBMSG00010000307 CAB39 (ENSBMSG00010000347) Pecora ANCESTRAL SPECIES 11 ENSGT00940000163382 ENSGT00590000083094.a.b ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C ENSGT00950000183004.a.b.a.a ENSGT00940000157480 ENSGT00390000015216 ENSGT00940000156619 ENSGT00510000047764 ENSGT00940000155472.a.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072.c.a ENSGT00940000158490 Percora_a ANCESTRAL SPECIES 11 ENSGT00940000163382 ENSGT00590000083094.a.b ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C ENSGT00950000183004.a.b.a.a ENSGT00940000157480 ENSGT00390000015216 ENSGT00940000156619 ENSGT00510000047764 ENSGT00940000155472.a.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072.c.a ENSGT00940000158490 Bovidae ANCESTRAL SPECIES 12 ENSGT00940000163382 ENSGT00590000083094.a.b ENSGT00940000159477 ENSGT00390000013249 ENSGT00940000155529.C ENSGT00950000183004.a.b.a.a ENSGT00940000157480 ENSGT00390000015216 ENSGT00940000156619 ENSGT00510000047764 ENSGT00940000155472.a.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT01100000263600 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072.c.a Bovinae ANCESTRAL SPECIES 8 ENSGT00590000083094.a.b ENSGT00940000159477 ENSGT00940000153305.d.`b.b ENSGT00390000013249 ENSGT00940000155529.C ENSGT00950000183004.a.b.a.a ENSGT00940000157480 ENSGT00390000015216 ENSGT00940000156619 ENSGT00510000047764 ENSGT00940000155472.a.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000159695.h ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT01100000263600 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072.c.a Bos ANCESTRAL SPECIES 8 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265.c ENSGT00950000185265.d ENSGT00940000153143.a.a.f.e.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b ##17 ENSGT00940000153143.a.a.f.e.a.a.b.a ##17 ENSGT00940000153143.a.a.f.e.a.a.b.b ##17 ENSGT00940000153143.a.a.f.e.a.a.a ##17 ENSGT00940000153143.a.a.f.e.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000159695.h ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00940000153362.a.cb.a.b.a ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT01100000263600 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 Bos_b ANCESTRAL SPECIES 7 ENSGT00940000156619 ENSGT00510000047764 ENSGT00940000155472.a.a ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b ENSGT00550000074794.k.b.a ENSGT00730000111212.i.a ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.a.f.e.a.a.b.a ##17 ENSGT00940000153143.a.a.f.e.a.a.b.b ##17 ENSGT00940000153143.a.a.f.e.a.a.a ##17 ENSGT00940000153143.a.a.f.e.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000159695.h ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00940000153362.a.cb.a.b.a ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072.c.a Cow MODERN SPECIES 23 CPED1 (ENSBTAG00000002938) ING3 (ENSBTAG00000016332) TSPAN12 (ENSBTAG00000015337) KCND2 (ENSBTAG00000032077) ENSBTAG00000031464 ENSBTAG00000006152 LSM8 (ENSBTAG00000012649) ENSBTAG00000049399 ##17 ENSBTAG00000002859 ##17 ENSBTAG00000055254 ##17 ENSBTAG00000053474 ##17 ENSBTAG00000000144 #17 AMPH (ENSBTAG00000031967) #18 VPS41 (ENSBTAG00000007305) #20 POU6F2 (ENSBTAG00000013648) #21 YAE1 (ENSBTAG00000001892) #22 RALA (ENSBTAG00000006661) #23 ENSBTAG00000054825 CDK13 (ENSBTAG00000001528) #25 MPLKIP (ENSBTAG00000018715) #26 SUGCT (ENSBTAG00000032121) #27 ENSBTAG00000053253 INHBA (ENSBTAG00000048508) #28 GLI3 (ENSBTAG00000010671) #29 C4H7orf25 (ENSBTAG00000009472) #30 PSMA2 (ENSBTAG00000000990) #31 MRPL32 (ENSBTAG00000000991) #32 HECW1 (ENSBTAG00000021216) #33 STK17A (ENSBTAG00000008143) #34 COA1 (ENSBTAG00000012968) BLVRA (ENSBTAG00000013414) Hybrid Bos Indicus MODERN SPECIES 23 ENSBIXG00005020661 ENSBIXG00005020654 ##17 ENSBIXG00005003487 ##17 ENSBIXG00005020637 ##17 ENSBIXG00005020605 ##17 ENSBIXG00005020596 #17 ENSBIXG00005020565 ENSBIXG00005020557 ENSBIXG00005005537 ##17 ENSBIXG00005020518 #17 ENSBIXG00005006259 #17 AMPH (ENSBIXG00005020476) #18 ENSBIXG00005020415 VPS41 (ENSBIXG00005020347) #20 POU6F2 (ENSBIXG00005020231) #21 YAE1 (ENSBIXG00005005866) #22 RALA (ENSBIXG00005020138) #23 ENSBIXG00005020124 ENSBIXG00005020109 CDK13 (ENSBIXG00005020092) #25 MPLKIP (ENSBIXG00005020016) #26 SUGCT (ENSBIXG00005003265) #27 ENSBIXG00005019940 INHBA (ENSBIXG00005019918) #28 GLI3 (ENSBIXG00005019847) #29 ENSBIXG00005006253 C7orf25 (ENSBIXG00005019735) #30 PSMA2 (ENSBIXG00005007827) #31 MRPL32 (ENSBIXG00005019681) #32 HECW1 (ENSBIXG00005019608) #33 ENSBIXG00005006146 Bos_a ANCESTRAL SPECIES 12 ENSGT00940000161777.b ENSGT00730000111212.i.a ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265.c ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b ##17 ENSGT00940000153143.a.a.f.e.a.a.b.a ##17 ENSGT00940000153143.a.a.f.e.a.a.b.b ##17 ENSGT00940000153143.a.a.f.e.a.a.a ##17 ENSGT00940000153143.a.a.f.e.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000159695.h ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00940000153362.a.cb.a.b.a ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT01100000263600 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 Wild yak MODERN SPECIES 130 ENSBMUG00000004688 #17 ENSBMUG00000004661 ENSBMUG00000004644 #17 AMPH (ENSBMUG00000004619) #18 VPS41 (ENSBMUG00000004561) #20 POU6F2 (ENSBMUG00000004479) #21 YAE1 (ENSBMUG00000004434) #22 RALA (ENSBMUG00000004423) #23 ENSBMUG00000004411 CDK13 (ENSBMUG00000004384) #25 MPLKIP (ENSBMUG00000004347) #26 SUGCT (ENSBMUG00000004307) #27 INHBA (ENSBMUG00000004244) #28 Domestic yak MODERN SPECIES 23 ENSBGRG00000026231 ENSBGRG00000007313 ENSBGRG00000007452 ##17 ENSBGRG00000007474 ENSBGRG00000007497 ##17 ENSBGRG00000007552 ##17 ENSBGRG00000007614 ##17 ENSBGRG00000007638 ##17 ENSBGRG00000007662 ##17 ENSBGRG00000007684 ##17 ENSBGRG00000007724 #17 ENSBGRG00000007791 #17 AMPH (ENSBGRG00000007825) #18 VPS41 (ENSBGRG00000008270) #20 POU6F2 (ENSBGRG00000008844) #21 YAE1 (ENSBGRG00000009045) #22 RALA (ENSBGRG00000009084) #23 ENSBGRG00000009155 CDK13 (ENSBGRG00000009206) #25 MPLKIP (ENSBGRG00000009446) #26 SUGCT (ENSBGRG00000009489) #27 ENSBGRG00000009661 INHBA (ENSBGRG00000009678) #28 GLI3 (ENSBGRG00000009720) #29 ENSBGRG00000009871 C7orf25 (ENSBGRG00000009953) #30 ENSBGRG00000009970 #31 MRPL32 (ENSBGRG00000010055) #32 HECW1 (ENSBGRG00000010187) #33 ENSBGRG00000010541 STK17A (ENSBGRG00000010569) #34 American bison MODERN SPECIES 3354 ENSBBBG00000003947 ##17 ENSBBBG00000007259 #17 ENSBBBG00000003951 AMPH (ENSBBBG00000015904) #18 ENSBBBG00000015915 VPS41 (ENSBBBG00000016003) #20 POU6F2 (ENSBBBG00000007418) #21 YAE1 (ENSBBBG00000016071) #22 RALA (ENSBBBG00000016078) #23 ENSBBBG00000016085 ENSBBBG00000016096 ENSBBBG00000016100 ENSBBBG00000016104 CDK13 (ENSBBBG00000004014) #25 MPLKIP (ENSBBBG00000016185) #26 SUGCT (ENSBBBG00000016251) #27 INHBA (ENSBBBG00000016277) #28 ENSBBBG00000016287 GLI3 (ENSBBBG00000016416) #29 C7orf25 (ENSBBBG00000016430) #30 PSMA2 (ENSBBBG00000007372) #31 MRPL32 (ENSBBBG00000007141) #32 ENSBBBG00000016533 Caprinae ANCESTRAL SPECIES 10 ENSGT00390000015216 ENSGT00940000156619 ENSGT00510000047764 ENSGT00940000155472.a.a ENSGT00730000111212.i.b ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00950000185265 ENSGT00940000153143.a.a.f.e.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b ##17 ENSGT00940000153143.a.a.f.e.a.a.a ##17 ENSGT00940000153143.a.a.f.e.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT01100000263600 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072.c.a Rambouillet Sheep MODERN SPECIES 20 TSPAN12 (ENSOARG00020002120) KCND2 (ENSOARG00020002102) ENSOARG00020002086 ENSOARG00020002076 #17 LSM8 (ENSOARG00020002018) ENSOARG00020002009 ##17 ENSOARG00020002006 ENSOARG00020002001 ##17 ENSOARG00020001983 ##17 ENSOARG00020001968 ##17 ENSOARG00020001954 ##17 ENSOARG00020001937 AMPH (ENSOARG00020001336) #18 VPS41 (ENSOARG00020000815) #20 POU6F2 (ENSOARG00020000606) #21 ENSOARG00020000581 #22 RALA (ENSOARG00020000572) #23 CDK13 (ENSOARG00020000425) #25 MPLKIP (ENSOARG00020000391) #26 SUGCT (ENSOARG00020000282) #27 INHBA (ENSOARG00020000159) #28 ENSOARG00020000108 GLI3 (ENSOARG00020010338) #29 ENSOARG00020010281 C7orf25 (ENSOARG00020010245) #30 ENSOARG00020010111 #31 MRPL32 (ENSOARG00020010057) #32 ENSOARG00020010002 HECW1 (ENSOARG00020009226) #33 ENSOARG00020009157 STK17A (ENSOARG00020009115) #34 Goat MODERN SPECIES 23 CPED1 (ENSCHIG00000007761) ING3 (ENSCHIG00000009707) TSPAN12 (ENSCHIG00000012755) ENSCHIG00000025503 KCND2 (ENSCHIG00000017913) ENSCHIG00000022010 LSM8 (ENSCHIG00000014201) ENSCHIG00000007301 ##17 ENSCHIG00000018076 ##17 ENSCHIG00000013794 #17 AMPH (ENSCHIG00000020495) #18 ENSCHIG00000011903 VPS41 (ENSCHIG00000005959) #20 ENSCHIG00000020600 #21 ENSCHIG00000016882 #21 YAE1 (ENSCHIG00000016002) #22 RALA (ENSCHIG00000013549) #23 CDK13 (ENSCHIG00000022113) #25 ENSCHIG00000022322 MPLKIP (ENSCHIG00000021871) #26 SUGCT (ENSCHIG00000017599) #27 INHBA (ENSCHIG00000025901) #28 GLI3 (ENSCHIG00000015297) #29 ENSCHIG00000012804 C7orf25 (ENSCHIG00000009068) #30 ENSCHIG00000012524 ##31 MRPL32 (ENSCHIG00000026167) #32 HECW1 (ENSCHIG00000018639) #33 ENSCHIG00000022757 STK17A (ENSCHIG00000012894) #34 COA1 (ENSCHIG00000025366) Siberian musk deer MODERN SPECIES 87 VPS41 (ENSMMSG00000008890) #20 POU6F2 (ENSMMSG00000009061) #21 ENSMMSG00000009247 YAE1 (ENSMMSG00000009286) #22 RALA (ENSMMSG00000009317) #23 CDK13 (ENSMMSG00000009356) #25 MPLKIP (ENSMMSG00000009516) #26 SUGCT (ENSMMSG00000009548) #27 INHBA (ENSMMSG00000009680) #28 ENSMMSG00000009697 GLI3 (ENSMMSG00000009711) #29 C7orf25 (ENSMMSG00000009736) #30 PSMA2 (ENSMMSG00000009746) #31 MRPL32 (ENSMMSG00000009758) #32 ENSMMSG00000009775 ENSMMSG00000009803 HECW1 (ENSMMSG00000009873) #33 ENSMMSG00000010172 STK17A (ENSMMSG00000010195) #34 Yarkand deer MODERN SPECIES 9 ING3 (ENSCHYG00000023988) TSPAN12 (ENSCHYG00000023924) KCND2 (ENSCHYG00000023858) ENSCHYG00000023821 ENSCHYG00000023772 ENSCHYG00000023745 ##17 ENSCHYG00000023709 ##17 ENSCHYG00000023676 ##17 ENSCHYG00000023641 ##17 ENSCHYG00000023578 #17 TRGV9 (ENSCHYG00000023546) ##17 ENSCHYG00000023515 AMPH (ENSCHYG00000023423) #18 VPS41 (ENSCHYG00000023031) #20 POU6F2 (ENSCHYG00000022756) #21 YAE1 (ENSCHYG00000022705) #22 RALA (ENSCHYG00000022661) #23 CDK13 (ENSCHYG00000022509) #25 MPLKIP (ENSCHYG00000022483) #26 ENSCHYG00000022441 ENSCHYG00000022424 SUGCT (ENSCHYG00000022125) #27 ENSCHYG00000022091 INHBA (ENSCHYG00000022041) #28 GLI3 (ENSCHYG00000021798) #29 ENSCHYG00000021751 ENSCHYG00000021719 C7orf25 (ENSCHYG00000021701) #30 PSMA2 (ENSCHYG00000021589) #31 MRPL32 (ENSCHYG00000021557) #32 HECW1 (ENSCHYG00000020708) #33 Camelidae ANCESTRAL SPECIES 2 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b ##17 ENSGT00940000153143.a.a.f.f ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00940000158490 ENSGT00940000158323 Alpaca MODERN SPECIES 2665 VPS41 (ENSVPAG00000002802) #20 ENSVPAG00000002808 #21 YAE1 (ENSVPAG00000002809) #22 RALA (ENSVPAG00000002810) #23 Arabian camel MODERN SPECIES 33 ENSCDRG00005014311 NRCAM (ENSCDRG00005013628) PNPLA8 (ENSCDRG00005013502) ENSCDRG00005013484 NME8 (ENSCDRG00005013336) #16 SFRP4 (ENSCDRG00005013281) EPDR1 (ENSCDRG00005013212) STARD3NL (ENSCDRG00005013129) ENSCDRG00005013102 ##17 ENSCDRG00005013075 ##17 ENSCDRG00005013064 ##17 TRGV9 (ENSCDRG00005013028) ##17 AMPH (ENSCDRG00005012906) #18 VPS41 (ENSCDRG00005012696) #20 ENSCDRG00005012656 #21 YAE1 (ENSCDRG00005012620) #22 RALA (ENSCDRG00005012560) #23 CDK13 (ENSCDRG00005012070) #25 MPLKIP (ENSCDRG00005012010) #26 SUGCT (ENSCDRG00005011669) #27 INHBA (ENSCDRG00005011609) #28 GLI3 (ENSCDRG00005011370) #29 ENSCDRG00005011309 #29 C7orf25 (ENSCDRG00005011146) #30 MRPL32 (ENSCDRG00005011105) #32 HECW1 (ENSCDRG00005010909) #33 ENSCDRG00005010848 #34 COA1 (ENSCDRG00005010728) BLVRA (ENSCDRG00005010641) POLM (ENSCDRG00005010471) AEBP1 (ENSCDRG00005010388) Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Carnivora ANCESTRAL SPECIES 15 ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Caniformia ANCESTRAL SPECIES 11 ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00550000074844 ENSGT00940000156003 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Ursidae ANCESTRAL SPECIES 12 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.a.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b.eb #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179.y.a ENSGT00390000011179.y.b Ursus ANCESTRAL SPECIES 47 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.b.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.a.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.b.a.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b.eb #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179.y.a ENSGT00390000011179.y.b Polar bear MODERN SPECIES 254 NME8 (ENSUMAG00000011128) #16 SFRP4 (ENSUMAG00000011122) EPDR1 (ENSUMAG00000011119) STARD3NL (ENSUMAG00000011107) ENSUMAG00000011095 ##17 ENSUMAG00000011093 ##17 ENSUMAG00000011092 ##17 ENSUMAG00000011085 ##17 ENSUMAG00000011080 ##17 ENSUMAG00000011076 ##17 ENSUMAG00000011067 ##17 ENSUMAG00000011063 ##17 AMPH (ENSUMAG00000010258) #18 VPS41 (ENSUMAG00000010082) #20 POU6F2 (ENSUMAG00000010055) #21 YAE1 (ENSUMAG00000010045) #22 RALA (ENSUMAG00000010042) #23 CDK13 (ENSUMAG00000009940) #25 MPLKIP (ENSUMAG00000009927) #26 SUGCT (ENSUMAG00000009910) #27 INHBA (ENSUMAG00000009886) #28 ENSUMAG00000009879 #29 C7orf25 (ENSUMAG00000009863) #30 PSMA2 (ENSUMAG00000009859) #31 MRPL32 (ENSUMAG00000009855) #32 ENSUMAG00000009845 #33 ENSUMAG00000009834 #33 STK17A (ENSUMAG00000009828) #34 COA1 (ENSUMAG00000009824) BLVRA (ENSUMAG00000009818) ENSUMAG00000009809 American black bear MODERN SPECIES 1805 ENSUAMG00000023821 #21 YAE1 (ENSUAMG00000023819) #22 RALA (ENSUAMG00000023818) #23 Giant Panda MODERN SPECIES ENSAMEG00000028077 ##17 STARD3NL (ENSAMEG00000014271) ENSAMEG00000023819 ##17 ENSAMEG00000018862 ##17 ENSAMEG00000023613 ##17 ENSAMEG00000008188 ##17 ENSAMEG00000028940 ##17 ENSAMEG00000029209 ##17 ENSAMEG00000030382 ##17 ENSAMEG00000030076 ##17 ENSAMEG00000025931 ##17 ENSAMEG00000030993 ##17 AMPH (ENSAMEG00000008197) #18 VPS41 (ENSAMEG00000008248) #20 ENSAMEG00000029042 #21 YAE1 (ENSAMEG00000008311) #22 ENSAMEG00000008355 #23 CDK13 (ENSAMEG00000008368) #25 MPLKIP (ENSAMEG00000008385) #26 SUGCT (ENSAMEG00000008389) #27 INHBA (ENSAMEG00000008401) #28 GLI3 (ENSAMEG00000008405) #29 PSMA2 (ENSAMEG00000009463) #31 MRPL32 (ENSAMEG00000009422) #32 HECW1 (ENSAMEG00000009403) #33 STK17A (ENSAMEG00000009381) #34 ENSAMEG00000009377 BLVRA (ENSAMEG00000017487) ENSAMEG00000017491 ENSAMEG00000017495 ENSAMEG00000030622 Mustelinae ANCESTRAL SPECIES 85 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 American mink MODERN SPECIES 44 TLR1 (ENSNVIG00000007556) KLF3 (ENSNVIG00000007568) ENSNVIG00000007582 ENSNVIG00000007594 ENSNVIG00000007613 PGM2 (ENSNVIG00000007633) RELL1 (ENSNVIG00000007645) ENSNVIG00000007667 NWD2 (ENSNVIG00000007681) DTHD1 (ENSNVIG00000007729) ENSNVIG00000007808 ARAP2 (ENSNVIG00000007823) ENSNVIG00000007960 VPS41 (ENSNVIG00000007984) #20 POU6F2 (ENSNVIG00000008041) #21 YAED1 (ENSNVIG00000008105) #22 ENSNVIG00000008132 #23 CDK13 (ENSNVIG00000008170) #25 MPLKIP (ENSNVIG00000008260) #26 SUGCT (ENSNVIG00000008278) #27 ENSNVIG00000008410 Ferret MODERN SPECIES 165 AMPH (ENSMPUG00000018129) #18 ENSMPUG00000018130 VPS41 (ENSMPUG00000018131) #20 POU6F2 (ENSMPUG00000018132) #21 YAE1 (ENSMPUG00000018133) #22 ENSMPUG00000018134 RALA (ENSMPUG00000018135) #23 ENSMPUG00000018136 CDK13 (ENSMPUG00000018137) #25 MPLKIP (ENSMPUG00000018138) #26 SUGCT (ENSMPUG00000018139) #27 ENSMPUG00000018140 ENSMPUG00000018141 INHBA (ENSMPUG00000018142) #28 GLI3 (ENSMPUG00000018143) #29 C7orf25 (ENSMPUG00000018144) #30 PSMA2 (ENSMPUG00000018145) #31 ENSMPUG00000018146 #32 ENSMPUG00000018147 STK17A (ENSMPUG00000018148) #34 Canidae ANCESTRAL SPECIES 54 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b.h ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.f.a.a #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.f.b #17 ENSGT00940000153143.a.b.b.a.b.d.b.b.i.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.e #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00390000008294.e.b.a.a ENSGT00390000001376.db.g ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00900000143452 ENSGT00940000154014.a #34 ENSGT00440000033985 Canis_lupus ANCESTRAL SPECIES 45 ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.f.a.b #17 ENSGT00940000153143.a.b.b.a.b.d.a.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.f.a.a #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b.i.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.b.h ##17 ENSGT00940000153143.a.b.b.a.b.d.a.a ##17 ENSGT00940000153143.a.b.b.a.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00390000008294.e.b.a.a ENSGT00390000001376.db.g.g ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Dog MODERN SPECIES 9 ENSCAFG00845022077 STARD3NL (ENSCAFG00845021955) ENSCAFG00845021911 ##17 ENSCAFG00845021879 #17 ENSCAFG00845021852 ENSCAFG00845021823 ##17 ENSCAFG00845021753 ##17 ENSCAFG00845021676 ##17 ENSCAFG00845021625 ##17 ENSCAFG00845021399 ##17 ENSCAFG00845021281 ##17 AMPH (ENSCAFG00845020583) #18 VPS41 (ENSCAFG00845020061) #20 ENSCAFG00845019954 POU6F2 (ENSCAFG00845019684) #21 YAE1 (ENSCAFG00845019598) #22 RALA (ENSCAFG00845019538) #23 CDK13 (ENSCAFG00845019359) #25 MPLKIP (ENSCAFG00845019316) #26 SUGCT (ENSCAFG00845018864) #27 ENSCAFG00845018696 INHBA (ENSCAFG00845018632) #28 GLI3 (ENSCAFG00845018240) #29 C18H7orf25 (ENSCAFG00845018090) #30 PSMA2 (ENSCAFG00845017988) #31 MRPL32 (ENSCAFG00845017918) #32 ENSCAFG00845017883 HECW1 (ENSCAFG00845017152) #33 STK17A (ENSCAFG00845011865) #34 COA1 (ENSCAFG00845011827) BLVRA (ENSCAFG00845011746) Dingo MODERN SPECIES 103 EPDR1 (ENSCAFG00020023267) STARD3NL (ENSCAFG00020023276) ENSCAFG00020023281 #17 ENSCAFG00020023285 ##17 ENSCAFG00020023288 #17 ENSCAFG00020023292 ##17 ENSCAFG00020023304 ENSCAFG00020023307 ##17 ENSCAFG00020023310 ENSCAFG00020023314 ##17 ENSCAFG00020023317 ##17 AMPH (ENSCAFG00020023336) #18 VPS41 (ENSCAFG00020023396) #20 POU6F2 (ENSCAFG00020023412) #21 ENSCAFG00020023429 YAE1 (ENSCAFG00020023432) #22 RALA (ENSCAFG00020023437) #23 ENSCAFG00020023440 CDK13 (ENSCAFG00020023450) #25 MPLKIP (ENSCAFG00020023490) #26 SUGCT (ENSCAFG00020023498) #27 ENSCAFG00020023526 INHBA (ENSCAFG00020023530) #28 GLI3 (ENSCAFG00020023540) #29 C7orf25 (ENSCAFG00020023562) #30 PSMA2 (ENSCAFG00020023566) #31 MRPL32 (ENSCAFG00020023577) #32 HECW1 (ENSCAFG00020023579) #33 STK17A (ENSCAFG00020023589) #34 COA1 (ENSCAFG00020023593) BLVRA (ENSCAFG00020023597) Red fox MODERN SPECIES 60 ENSVVUG00000005411 #17 AMPH (ENSVVUG00000005432) #18 VPS41 (ENSVVUG00000005485) #20 ENSVVUG00000005535 ENSVVUG00000005547 ENSVVUG00000005573 #21 YAE1 (ENSVVUG00000005580) #22 RALA (ENSVVUG00000005586) #23 ENSVVUG00000005608 CDK13 (ENSVVUG00000005637) #25 MPLKIP (ENSVVUG00000005927) #26 SUGCT (ENSVVUG00000005947) #27 ENSVVUG00000006053 ENSVVUG00000006098 INHBA (ENSVVUG00000006107) #28 GLI3 (ENSVVUG00000006139) #29 CUNH7orf25 (ENSVVUG00000006554) #30 PSMA2 (ENSVVUG00000006556) #31 MRPL32 (ENSVVUG00000006632) #32 HECW1 (ENSVVUG00000006733) #33 ENSVVUG00000009786 STK17A (ENSVVUG00000009792) #34 Felidae ANCESTRAL SPECIES 13 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000182574 ENSGT00940000164413 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.b #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT01010000227741 ENSGT00390000006350.m.b.l ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Panthera ANCESTRAL SPECIES 1 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000182574 ENSGT00940000164413 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.b #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.a #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.a #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT01010000227741 ENSGT00390000006350.m.b.l ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Panthera_a ANCESTRAL SPECIES ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000182574 ENSGT00940000164413 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.b #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.b.a #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.b #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.d.a #17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.c.a.a.a #17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT01010000227741 ENSGT00390000006350.m.b.l ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 lion MODERN SPECIES 2 ENSPLOG00000014499 NME8 (ENSPLOG00000014369) #16 SFRP4 (ENSPLOG00000014304) EPDR1 (ENSPLOG00000014221) ENSPLOG00000014190 STARD3NL (ENSPLOG00000014122) ENSPLOG00000014092 #17 ENSPLOG00000014080 #17 ENSPLOG00000014062 ENSPLOG00000014034 #17 ENSPLOG00000013936 #17 ENSPLOG00000013911 #17 AMPH (ENSPLOG00000013547) #18 VPS41 (ENSPLOG00000013425) #20 POU6F2 (ENSPLOG00000013191) #21 YAE1 (ENSPLOG00000013140) #22 RALA (ENSPLOG00000013111) #23 ENSPLOG00000012991 ENSPLOG00000012926 CDK13 (ENSPLOG00000012792) #25 MPLKIP (ENSPLOG00000012761) #26 SUGCT (ENSPLOG00000012382) #27 INHBA (ENSPLOG00000012325) #28 GLI3 (ENSPLOG00000012098) #29 C7orf25 (ENSPLOG00000012077) #30 PSMA2 (ENSPLOG00000012010) #31 MRPL32 (ENSPLOG00000011953) #32 HECW1 (ENSPLOG00000011517) #33 STK17A (ENSPLOG00000011441) #34 ENSPLOG00000011414 BLVRA (ENSPLOG00000011346) leopard MODERN SPECIES 20 NRCAM (ENSPPRG00000004719) PNPLA8 (ENSPPRG00000006146) ENSPPRG00000006900 NME8 (ENSPPRG00000007373) #16 SFRP4 (ENSPPRG00000007513) EPDR1 (ENSPPRG00000008052) STARD3NL (ENSPPRG00000009862) ENSPPRG00000010148 ENSPPRG00000010408 #17 ENSPPRG00000011214 #17 ENSPPRG00000011849 #17 ENSPPRG00000013366 #17 AMPH (ENSPPRG00000018727) #18 VPS41 (ENSPPRG00000023241) #20 POU6F2 (ENSPPRG00000000448) #21 YAE1 (ENSPPRG00000000795) #22 RALA (ENSPPRG00000001413) #23 ENSPPRG00000002725 CDK13 (ENSPPRG00000004607) #25 ENSPPRG00000004981 #26 ENSPPRG00000005409 SUGCT (ENSPPRG00000007612) #27 INHBA (ENSPPRG00000009179) #28 GLI3 (ENSPPRG00000009937) #29 ENSPPRG00000010031 C7orf25 (ENSPPRG00000010249) #30 PSMA2 (ENSPPRG00000011046) #31 MRPL32 (ENSPPRG00000011233) #32 HECW1 (ENSPPRG00000013400) #33 STK17A (ENSPPRG00000013907) #34 ENSPPRG00000014621 Tiger MODERN SPECIES 484 ENSPTIG00000011341 #17 ENSPTIG00000011171 #17 ENSPTIG00000011074 #17 ENSPTIG00000010636 #17 AMPH (ENSPTIG00000008766) #18 VPS41 (ENSPTIG00000007310) #20 POU6F2 (ENSPTIG00000005482) #21 YAE1 (ENSPTIG00000004957) #22 RALA (ENSPTIG00000004587) #23 ENSPTIG00000001053 #25 MPLKIP (ENSPTIG00000020797) #26 SUGCT (ENSPTIG00000019973) #27 INHBA (ENSPTIG00000019931) #28 ENSPTIG00000019835 #29 C7orf25 (ENSPTIG00000019732) #30 PSMA2 (ENSPTIG00000019642) #31 MRPL32 (ENSPTIG00000019413) #32 HECW1 (ENSPTIG00000018862) #33 STK17A (ENSPTIG00000018723) #34 BLVRA (ENSPTIG00000018409) VOPP1 (ENSPTIG00000017875) LANCL2 (ENSPTIG00000017744) EGFR (ENSPTIG00000015949) Cat MODERN SPECIES 1 NME8 (ENSFCAG00000012691) #16 SFRP4 (ENSFCAG00000025247) EPDR1 (ENSFCAG00000046351) ENSFCAG00000052500 STARD3NL (ENSFCAG00000008357) ENSFCAG00000053315 ##17 ENSFCAG00000032420 #17 ENSFCAG00000050464 ENSFCAG00000039973 ENSFCAG00000035027 #17 ENSFCAG00000023786 #17 TRG (ENSFCAG00000050998) #17 AMPH (ENSFCAG00000003529) #18 VPS41 (ENSFCAG00000019210) #20 POU6F2 (ENSFCAG00000035781) #21 YAE1 (ENSFCAG00000027937) #22 RALA (ENSFCAG00000025425) #23 ENSFCAG00000048602 ENSFCAG00000033905 CDK13 (ENSFCAG00000010257) #25 MPLKIP (ENSFCAG00000036429) #26 SUGCT (ENSFCAG00000010258) #27 INHBA (ENSFCAG00000010866) #28 GLI3 (ENSFCAG00000011989) #29 CA2H7orf25 (ENSFCAG00000013690) #30 PSMA2 (ENSFCAG00000023349) #31 MRPL32 (ENSFCAG00000041230) #32 HECW1 (ENSFCAG00000010375) #33 STK17A (ENSFCAG00000006138) #34 ENSFCAG00000039405 ENSFCAG00000049450 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00940000156003 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179 ENSGT00940000154390.A.j Equus ANCESTRAL SPECIES 57 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b.a ##17 ENSGT00940000153143.a.a.f.c.a.b.b ##17 ENSGT00940000153143.a.a.f.c.a.a.a.a.b.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.j #17 ENSGT00940000153143.a.a.f.c.a.a.a.b ##17 ENSGT00940000153143.a.b.b.b.o ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.a.a.a.b.b ##17 ENSGT00940000153143.a.a.f.c.a.a.a.a.a.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b.i.b #17 ENSGT00940000153143.a.a.f.c.a.b.a ##17 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a #17 ENSGT00940000153143.a.a.f.c.a.a.a.a.b.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996.u #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000011179 ENSGT00940000154390.A.j Donkey MODERN SPECIES ENSEASG00005027487 ##17 ENSEASG00005034452 ##17 ENSEASG00005017579 #17 ENSEASG00005029474 ##17 ENSEASG00005033047 ##17 ENSEASG00005023742 ##17 ENSEASG00005027386 ##17 ENSEASG00005024515 #17 ENSEASG00005024703 ##17 ENSEASG00005027212 #17 ENSEASG00005032514 ##17 AMPH (ENSEASG00005017588) #18 ENSEASG00005017606 #20 ENSEASG00005027728 POU6F2 (ENSEASG00005017610) #21 YAE1 (ENSEASG00005017612) #22 RALA (ENSEASG00005017614) #23 ENSEASG00005036227 CDK13 (ENSEASG00005017623) #25 MPLKIP (ENSEASG00005017642) #26 SUGCT (ENSEASG00005017649) #27 INHBA (ENSEASG00005029952) #28 GLI3 (ENSEASG00005017667) #29 C7orf25 (ENSEASG00005017675) #30 PSMA2 (ENSEASG00005017678) #31 ENSEASG00005027314 #32 HECW1 (ENSEASG00005017685) #33 STK17A (ENSEASG00005017699) #34 COA1 (ENSEASG00005029281) BLVRA (ENSEASG00005017707) MRPS24 (ENSEASG00005030446) Horse MODERN SPECIES 25 ENSECAG00000041152 ##17 ENSECAG00000034648 #17 ENSECAG00000046026 ##17 ENSECAG00000039965 ##17 ENSECAG00000044453 ##17 ENSECAG00000037575 #17 ENSECAG00000042774 ##17 ENSECAG00000057402 ##17 ENSECAG00000036132 #17 ENSECAG00000059202 ##17 ENSECAG00000038560 #17 ENSECAG00000050978 ##17 AMPH (ENSECAG00000004135) #18 VPS41 (ENSECAG00000006943) #20 POU6F2 (ENSECAG00000013209) #21 YAE1 (ENSECAG00000014499) #22 RALA (ENSECAG00000017044) #23 ENSECAG00000051072 ENSECAG00000043932 CDK13 (ENSECAG00000017341) #25 MPLKIP (ENSECAG00000033876) #26 SUGCT (ENSECAG00000020946) #27 INHBA (ENSECAG00000022448) #28 GLI3 (ENSECAG00000009281) #29 C4H7orf25 (ENSECAG00000002284) #30 ENSECAG00000009052 #32 PSMA2 (ENSECAG00000020597) #31 HECW1 (ENSECAG00000010537) #33 STK17A (ENSECAG00000006915) #34 COA1 (ENSECAG00000011136) BLVRA (ENSECAG00000011650) Chiroptera ANCESTRAL SPECIES 24 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00440000033985 ENSGT00390000011072 Microchiroptera ANCESTRAL SPECIES 24 ENSGT00940000162514 ENSGT00940000155419 ENSGT00940000154738.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #17 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.b.cb.a #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00440000033985 ENSGT00390000011072 Microbat MODERN SPECIES 955 LAMB4 (ENSMLUG00000017380) NRCAM (ENSMLUG00000017381) ENSMLUG00000028543 PNPLA8 (ENSMLUG00000010509) NME8 (ENSMLUG00000004186) #16 SFRP4 (ENSMLUG00000004200) EPDR1 (ENSMLUG00000004207) STARD3NL (ENSMLUG00000012478) ENSMLUG00000022304 ENSMLUG00000025893 #17 ENSMLUG00000022442 ##17 ENSMLUG00000027596 ##17 AMPH (ENSMLUG00000009337) #18 VPS41 (ENSMLUG00000008811) #20 ENSMLUG00000002698 #21 YAE1 (ENSMLUG00000002704) #22 ENSMLUG00000024824 RALA (ENSMLUG00000009687) #23 CDK13 (ENSMLUG00000017326) #25 ENSMLUG00000030645 #26 ENSMLUG00000027675 SUGCT (ENSMLUG00000003940) #27 INHBA (ENSMLUG00000015706) #28 GLI3 (ENSMLUG00000015711) #29 ENSMLUG00000027695 C7orf25 (ENSMLUG00000010080) #30 ENSMLUG00000010086 #31 MRPL32 (ENSMLUG00000010108) #32 HECW1 (ENSMLUG00000003954) #33 GIMAP8 (ENSMLUG00000012405) ENSMLUG00000024808 Greater horseshoe bat MODERN SPECIES 12 NME8 (ENSRFEG00010019215) #16 SFRP4 (ENSRFEG00010019328) EPDR1 (ENSRFEG00010019352) STARD3NL (ENSRFEG00010019401) ENSRFEG00010019474 #17 ENSRFEG00010019487 #17 ENSRFEG00010019499 ENSRFEG00010019509 ##17 ENSRFEG00010019552 #17 ENSRFEG00010019565 ENSRFEG00010019577 ##17 AMPH (ENSRFEG00010019645) #18 VPS41 (ENSRFEG00010019744) #20 ENSRFEG00010019906 POU6F2 (ENSRFEG00010019962) #21 YAE1 (ENSRFEG00010020105) #22 RALA (ENSRFEG00010020134) #23 CDK13 (ENSRFEG00010020169) #25 MPLKIP (ENSRFEG00010020336) #26 SUGCT (ENSRFEG00010020366) #27 INHBA (ENSRFEG00010020467) #28 GLI3 (ENSRFEG00010020493) #29 C7orf25 (ENSRFEG00010020516) #30 PSMA2 (ENSRFEG00010020543) #31 ENSRFEG00010020602 #32 HECW1 (ENSRFEG00010020668) #33 COA1 (ENSRFEG00010020716) BLVRA (ENSRFEG00010020740) Megabat MODERN SPECIES 8084 YAE1 (ENSPVAG00000017851) #22 Atlantogenata ANCESTRAL SPECIES 7 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b #17 ENSGT00950000184753 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000171874 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Xenarthra ANCESTRAL SPECIES 250 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.b #17 ENSGT00950000184753 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a.e.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000171874 ENSGT00940000157116 #28 Sloth MODERN SPECIES 9210 YAE1 (ENSCHOG00000002643) #22 Armadillo MODERN SPECIES 1940 ENSDNOG00000038855 ##17 ENSDNOG00000014737 ENSDNOG00000048786 #17 ENSDNOG00000038588 ##17 ENSDNOG00000039893 ##17 ENSDNOG00000046537 ##17 ENSDNOG00000036487 ##17 ENSDNOG00000036977 ##17 AMPH (ENSDNOG00000045883) #18 ENSDNOG00000006684 #20 ENSDNOG00000038365 #20 ENSDNOG00000046137 POU6F2 (ENSDNOG00000008057) #21 ENSDNOG00000036702 ENSDNOG00000047994 YAE1 (ENSDNOG00000047546) #22 RALA (ENSDNOG00000046497) #23 ENSDNOG00000037711 CDK13 (ENSDNOG00000010349) #25 MPLKIP (ENSDNOG00000033002) #26 ENSDNOG00000049165 SUGCT (ENSDNOG00000019660) #27 ENSDNOG00000040442 ENSDNOG00000036221 ENSDNOG00000045281 #28 Afrotheria ANCESTRAL SPECIES 5 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481.g #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000171874 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00390000011072 ENSGT00390000015821 ENSGT00530000063186.b.a Afrotheria_a ANCESTRAL SPECIES 5 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a.a.b ##17 ENSGT00940000153143.a.a.f ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481.g #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000171874 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00390000011072 ENSGT00390000015821 ENSGT00530000063186.b.a Elephant MODERN SPECIES 428 ANLN (ENSLAFG00000012688) AOAH (ENSLAFG00000011259) ELMO1 (ENSLAFG00000018399) GPR141 (ENSLAFG00000010412) ENSLAFG00000028926 NME8 (ENSLAFG00000005939) #16 SFRP4 (ENSLAFG00000022015) EPDR1 (ENSLAFG00000007489) STARD3NL (ENSLAFG00000008145) ENSLAFG00000027843 ##17 ENSLAFG00000025683 ##17 ENSLAFG00000032633 ##17 AMPH (ENSLAFG00000015646) #18 VPS41 (ENSLAFG00000015987) #20 POU6F2 (ENSLAFG00000008294) #21 YAE1 (ENSLAFG00000026107) #22 RALA (ENSLAFG00000017942) #23 CDK13 (ENSLAFG00000017946) #25 MPLKIP (ENSLAFG00000021487) #26 ENSLAFG00000001629 INHBA (ENSLAFG00000012737) #28 GLI3 (ENSLAFG00000008944) #29 C7orf25 (ENSLAFG00000011416) #30 PSMA2 (ENSLAFG00000011417) #31 MRPL32 (ENSLAFG00000011427) #32 ENSLAFG00000016339 ENSLAFG00000008021 #33 STK17A (ENSLAFG00000017171) #34 BLVRA (ENSLAFG00000011250) VOPP1 (ENSLAFG00000016853) LANCL2 (ENSLAFG00000016836) Hyrax MODERN SPECIES 8039 YAE1 (ENSPCAG00000002008) #22 Marsupialia ANCESTRAL SPECIES 14 ENSGT00940000161145 ENSGT00530000063260 ENSGT00940000154839.C ENSGT00940000158818 ENSGT00940000155552 ENSGT00940000154471.a.b.a.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT01030000234518.E.c.b ENSGT01030000234518.E.c.a ENSGT00940000155994 ENSGT00390000008427 Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00940000161145 ENSGT00530000063260 ENSGT00940000154839.C ENSGT00940000158818 ENSGT00940000155552 ENSGT00940000154471.a.b.a.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.d.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT01030000234518.E.c.b ENSGT01030000234518.E.c.a ENSGT00940000155994 ENSGT00390000008427 Diprotodontia ANCESTRAL SPECIES 61 ENSGT00940000155552.b ENSGT00940000154471.a.b.a.a ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.d.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT01030000234518.E.c.b ENSGT01030000234518.E.c.a ENSGT00940000155994 ENSGT00390000008427 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00940000161145 ENSGT00530000063260 ENSGT00940000154839.C ENSGT00940000158818 ENSGT00940000155552.a.b ENSGT00940000155552.b ENSGT00940000154471.a.b.a.a ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.b ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870.d.b #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT01030000234518.E.c.b ENSGT01030000234518.E.c.a ENSGT00940000155994.tb ENSGT00390000008427 koala MODERN SPECIES 152 ENSPCIG00000023210 BICD2 (ENSPCIG00000023207) SFRP4 (ENSPCIG00000033685) ENSPCIG00000023195 STARD3NL (ENSPCIG00000003468) ENSPCIG00000031115 ##17 AMPH (ENSPCIG00000010587) #18 VPS41 (ENSPCIG00000010608) #20 POU6F2 (ENSPCIG00000035047) #21 YAE1 (ENSPCIG00000009972) #22 RALA (ENSPCIG00000004323) #23 CDK13 (ENSPCIG00000003007) #25 MPLKIP (ENSPCIG00000002954) #26 SUGCT (ENSPCIG00000002929) #27 INHBA (ENSPCIG00000027590) #28 GLI3 (ENSPCIG00000027591) #29 PSMA2 (ENSPCIG00000008876) #31 MRPL32 (ENSPCIG00000008901) #32 HECW1 (ENSPCIG00000017097) #33 ENSPCIG00000034872 STK17A (ENSPCIG00000017095) #34 GPR141 (ENSPCIG00000015085) ENSPCIG00000033160 ENSPCIG00000000677 AOAH (ENSPCIG00000025938) Common wonbat MODERN SPECIES 1053 ACTR8 (ENSVURG00010012535) IL17RB (ENSVURG00010012547) CHDH (ENSVURG00010012557) CACNA1D (ENSVURG00010012579) ENSVURG00010012644 ENSVURG00010012659 BICD2 (ENSVURG00010012672) SFRP4 (ENSVURG00010012677) EPDR1 (ENSVURG00010012685) STARD3NL (ENSVURG00010012693) ENSVURG00010012703 ##17 ENSVURG00010012712 ##17 ENSVURG00010012718 #18 VPS41 (ENSVURG00010012728) #20 POU6F2 (ENSVURG00010012753) #21 YAE1 (ENSVURG00010012778) #22 ENSVURG00010012782 RALA (ENSVURG00010012785) #23 ENSVURG00010012796 CDK13 (ENSVURG00010012823) #25 MPLKIP (ENSVURG00010013339) #26 SUGCT (ENSVURG00010013353) #27 INHBA (ENSVURG00010013385) #28 GLI3 (ENSVURG00010013401) #29 C7orf25 (ENSVURG00010013415) #30 ENSVURG00010013418 #31 MRPL32 (ENSVURG00010013428) #32 HECW1 (ENSVURG00010013441) #33 STK17A (ENSVURG00010013459) #34 ENSVURG00010013470 ENSVURG00010013476 Wallaby MODERN SPECIES 14906 ENSMEUG00000002360 #22 Tasmanian devil MODERN SPECIES ENSSHAG00000017675 STARD3NL (ENSSHAG00000003651) ENSSHAG00000003143 ##17 ENSSHAG00000026624 ENSSHAG00000021799 ENSSHAG00000022417 ENSSHAG00000029508 ENSSHAG00000031848 ENSSHAG00000020715 ENSSHAG00000031474 ENSSHAG00000028189 ##17 ENSSHAG00000005261 ##17 ENSSHAG00000026440 #18 VPS41 (ENSSHAG00000003647) #20 POU6F2 (ENSSHAG00000026712) #21 YAE1 (ENSSHAG00000021352) #22 RALA (ENSSHAG00000027620) #23 CDK13 (ENSSHAG00000012296) #25 MPLKIP (ENSSHAG00000021509) #26 SUGCT (ENSSHAG00000001316) #27 INHBA (ENSSHAG00000026238) #28 GLI3 (ENSSHAG00000009727) #29 C7orf25 (ENSSHAG00000027763) #30 PSMA2 (ENSSHAG00000005564) #31 ENSSHAG00000005433 #32 HECW1 (ENSSHAG00000026205) #33 ENSSHAG00000031695 #34 ENSSHAG00000001536 ENSSHAG00000022454 AOAH (ENSSHAG00000022160) MATCAP2 (ENSSHAG00000003634) Opossum MODERN SPECIES 5 ENSMODG00000012495 ACTR8 (ENSMODG00000012508) ENSMODG00000012517 CHDH (ENSMODG00000012523) ENSMODG00000012546 TKT (ENSMODG00000012573) BICD2 (ENSMODG00000012581) ENSMODG00000046040 #16 SFRP4 (ENSMODG00000012593) ENSMODG00000012599 STARD3NL (ENSMODG00000012602) ENSMODG00000012605 ##17 AMPH (ENSMODG00000012613) #18 VPS41 (ENSMODG00000012622) #20 POU6F2 (ENSMODG00000043266) #21 YAE1 (ENSMODG00000037058) #22 ENSMODG00000012643 #23 CDK13 (ENSMODG00000012657) #25 MPLKIP (ENSMODG00000024082) #26 ENSMODG00000012662 #27 ENSMODG00000012668 LSM5 (ENSMODG00000013274) PDE1C (ENSMODG00000013284) ENSMODG00000024079 ENSMODG00000013286 ENSMODG00000013297 NEUROD6 (ENSMODG00000013299) ITGA9 (ENSMODG00000013303) GOLGA4 (ENSMODG00000013315) ENSMODG00000013326 MLH1 (ENSMODG00000013353) Platypus MODERN SPECIES 15 ENSOANG00000040608 RPL12 (ENSOANG00000013186) LRSAM1 (ENSOANG00000009706) NIBAN2 (ENSOANG00000009704) ENSOANG00000049305 ENSOANG00000000414 MTBP (ENSOANG00000008087) ENSOANG00000041456 FAM83H (ENSOANG00000045011) ENSOANG00000044523 ENSOANG00000041687 NRBP2 (ENSOANG00000012722) ENSOANG00000041942 CDK13 (ENSOANG00000012799) #25 RALA (ENSOANG00000009445) #23 YAE1 (ENSOANG00000009446) #22 ENSOANG00000009447 ENSOANG00000020871 ENSOANG00000002006 ENSOANG00000012963 ENSOANG00000001528 ZNF618 (ENSOANG00000005539) ENSOANG00000049054 ENSOANG00000015666 C8orf76 (ENSOANG00000015667) ZHX1 (ENSOANG00000047134) SEMA4F (ENSOANG00000041234) ENSOANG00000043000 ENSOANG00000046245 LOXL3 (ENSOANG00000037966) ENSOANG00000043231 Sauria ANCESTRAL SPECIES ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a #17 ENSGT00940000153143.a.b.a ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Archelosauria ANCESTRAL SPECIES 6 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a #17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00940000153143.a.a ##17 ENSGT00940000153143.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Cryptodira ANCESTRAL SPECIES 4 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a #17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00940000153143.a.a ##17 ENSGT00940000153143.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a #17 ENSGT00940000153143.a.b.a.b.b ##17 ENSGT00940000153143.a.b.a.b.a ##17 ENSGT00940000153143.a.a ##17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925.sb.b #29 ENSGT00960000190657 ENSGT00940000155925.sb.a #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 Emydidae ANCESTRAL SPECIES 61 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925.sb.a #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 85 ENSTMTG00000015022 #18 ENSTMTG00000015054 ENSTMTG00000015075 #20 ENSTMTG00000015123 #21 ENSTMTG00000015203 #22 RALA (ENSTMTG00000015208) #23 ENSTMTG00000015216 #25 ENSTMTG00000015269 #26 ENSTMTG00000015276 #27 ENSTMTG00000015305 #28 ENSTMTG00000015313 #29 ENSTMTG00000015335 #30 ENSTMTG00000015340 #31 ENSTMTG00000015353 #32 Three-toed box turtle MODERN SPECIES 83 ENSTMTG00000003139 #18 ENSTMTG00000003160 ENSTMTG00000003170 #20 ENSTMTG00000003213 #21 ENSTMTG00000003231 #22 ENSTMTG00000003243 #23 ENSTMTG00000003261 #25 ENSTMTG00000003279 #26 ENSTMTG00000003290 #27 ENSTMTG00000003311 #28 ENSTMTG00000003322 #29 ENSTMTG00000003358 #29 ENSTMTG00000003366 #30 ENSTMTG00000003390 #31 ENSTMTG00000003402 #32 ENSTMTG00000003511 #33 ENSTMTG00000004163 #34 ENSTMTG00000004185 ENSTMTG00000004213 ENSTMTG00000004237 painted turtle MODERN SPECIES 724 ENSCPBG00000024795 #31 MRPL32 (ENSCPBG00000024797) #32 HECW1 (ENSCPBG00000024801) #33 STK17A (ENSCPBG00000024813) #34 COA1 (ENSCPBG00000024814) BLVRA (ENSCPBG00000024817) VOPP1 (ENSCPBG00000024819) LANCL2 (ENSCPBG00000024826) EGFR (ENSCPBG00000024828) ENSCPBG00000024829 ENSCPBG00000024830 SEC61G (ENSCPBG00000024831) ENSCPBG00000024833 VPS41 (ENSCPBG00000024840) #20 POU6F2 (ENSCPBG00000024844) #21 YAE1 (ENSCPBG00000024849) #22 ENSCPBG00000024850 RALA (ENSCPBG00000024854) #23 CDK13 (ENSCPBG00000024855) #25 MPLKIP (ENSCPBG00000024885) #26 SUGCT (ENSCPBG00000024889) #27 ENSCPBG00000024892 INHBA (ENSCPBG00000024895) #28 GLI3 (ENSCPBG00000024898) #29 ENSCPBG00000024905 AMPH (ENSCPBG00000024907) #18 STARD3NL (ENSCPBG00000024914) ENSCPBG00000024918 ##17 ENSCPBG00000024921 ENSCPBG00000024926 ##17 ENSCPBG00000024932 ##17 Testudinidae ANCESTRAL SPECIES 1 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b.a #17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00940000153143.a.b.a.b.b ##17 ENSGT00940000153143.a.b.a.b.a ##17 ENSGT00940000153143.a.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925.sb.b #29 ENSGT00960000190657 ENSGT00940000155925.sb.a #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 Abingdon island giant tortoise MODERN SPECIES 1755 ENSCABG00000000371 #21 YAE1 (ENSCABG00000000381) #22 RALA (ENSCABG00000000393) #23 CDK13 (ENSCABG00000000422) #25 MPLKIP (ENSCABG00000000518) #26 INHBA (ENSCABG00000000528) #28 GLI3 (ENSCABG00000000545) #29 C7orf25 (ENSCABG00000000568) #30 PSMA2 (ENSCABG00000000578) #31 MRPL32 (ENSCABG00000000584) #32 HECW1 (ENSCABG00000000619) #33 ENSCABG00000001206 #34 COA1 (ENSCABG00000001208) BLVRA (ENSCABG00000001215) VOPP1 (ENSCABG00000001223) LANCL2 (ENSCABG00000001233) ENSCABG00000001238 Goode s thornscrub tortoise MODERN SPECIES 11 EPDR1 (ENSGEVG00005006703) STARD3NL (ENSGEVG00005006723) ENSGEVG00005006795 #17 ENSGEVG00005006865 ##17 ENSGEVG00005007039 ##17 ENSGEVG00005007050 ##17 ENSGEVG00005007079 ##17 ENSGEVG00005007108 ##17 ENSGEVG00005007133 ##17 ENSGEVG00005007154 ##17 ENSGEVG00005007175 ##17 ENSGEVG00005007188 #18 ENSGEVG00005007210 #18 VPS41 (ENSGEVG00005007364) #20 POU6F2 (ENSGEVG00005007472) #21 YAE1 (ENSGEVG00005007590) #22 RALA (ENSGEVG00005007679) #23 CDK13 (ENSGEVG00005007718) #25 MPLKIP (ENSGEVG00005007861) #26 SUGCT (ENSGEVG00005007876) #27 INHBA (ENSGEVG00005007926) #28 ENSGEVG00005007961 #29 ENSGEVG00005008044 #29 ENSGEVG00005008058 C7orf25 (ENSGEVG00005008083) #30 PSMA2 (ENSGEVG00005008107) #31 MRPL32 (ENSGEVG00005008121) #32 HECW1 (ENSGEVG00005008218) #33 COA1 (ENSGEVG00005008672) STK17A (ENSGEVG00005008698) #34 VOPP1 (ENSGEVG00005008715) Chinese turtle MODERN SPECIES 1165 AOAH (ENSPSIG00000016738) ELMO1 (ENSPSIG00000016783) GPR141 (ENSPSIG00000002050) ENSPSIG00000002052 ENSPSIG00000016893 ENSPSIG00000016913 ENSPSIG00000016925 NME8 (ENSPSIG00000016965) #16 SFRP4 (ENSPSIG00000016980) EPDR1 (ENSPSIG00000017008) STARD3NL (ENSPSIG00000017010) ENSPSIG00000017099 #17 AMPH (ENSPSIG00000017102) #18 VPS41 (ENSPSIG00000017194) #20 POU6F2 (ENSPSIG00000017568) #21 YAE1 (ENSPSIG00000017587) #22 RALA (ENSPSIG00000017626) #23 CDK13 (ENSPSIG00000017710) #25 SUGCT (ENSPSIG00000017754) #27 ENSPSIG00000002054 INHBA (ENSPSIG00000017783) #28 GLI3 (ENSPSIG00000017804) #29 C7orf25 (ENSPSIG00000017908) #30 PSMA2 (ENSPSIG00000017910) #31 MRPL32 (ENSPSIG00000017913) #32 HECW1 (ENSPSIG00000017946) #33 STK17A (ENSPSIG00000018051) #34 COA1 (ENSPSIG00000018101) BLVRA (ENSPSIG00000018103) VOPP1 (ENSPSIG00000018109) LANCL2 (ENSPSIG00000004380) Archosauria ANCESTRAL SPECIES ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.a.a.a ##17 ENSGT00940000153143.a.a ##17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00940000153143.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Aves ANCESTRAL SPECIES 24 ENSGT00940000153143.a.a ##17 ENSGT00940000153143.a.b.a.b ##17 ENSGT00940000153143.a.b.a.a.a ##17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Neognathae ANCESTRAL SPECIES ENSGT00940000156069 ENSGT00390000010255 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153143.a.b.a.a.a ##17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Galloanserae ANCESTRAL SPECIES ENSGT00940000156069 ENSGT00390000010255 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503.c ENSGT00940000156503.d ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153143.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Anatidae ANCESTRAL SPECIES 1 ENSGT00390000010255 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503.c ENSGT00940000156503.d ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153143.a.b.a.a.a ##17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Pink-footed goose MODERN SPECIES 105 ENSABRG00000000006 #21 YAE1 (ENSABRG00000009780) #22 ENSABRG00000009736 RALA (ENSABRG00000009721) #23 ENSABRG00000009714 CDK13 (ENSABRG00000009706) #25 MPLKIP (ENSABRG00000009693) #26 SUGCT (ENSABRG00000009661) #27 INHBA (ENSABRG00000009640) #28 GLI3 (ENSABRG00000009626) #29 C7orf25 (ENSABRG00000009604) #30 PSMA2 (ENSABRG00000009600) #31 MRPL32 (ENSABRG00000009591) #32 HECW1 (ENSABRG00000009515) #33 STK17A (ENSABRG00000009500) #34 COA1 (ENSABRG00000009488) BLVRA (ENSABRG00000009477) Duck MODERN SPECIES 10 ENSAPLG00000024250 ENSAPLG00000026158 PDE1C (ENSAPLG00000008225) ENSAPLG00000024507 PPP1R17 (ENSAPLG00000009013) ENSAPLG00000027819 NEUROD6 (ENSAPLG00000009187) ITGA9 (ENSAPLG00000009236) ENSAPLG00000024831 GOLGA4 (ENSAPLG00000010196) LRRFIP2 (ENSAPLG00000010430) AMPH (ENSAPLG00000005709) #18 VPS41 (ENSAPLG00000005152) #20 POU6F2 (ENSAPLG00000005140) #21 ENSAPLG00000019588 YAE1 (ENSAPLG00000005137) #22 ENSAPLG00000005034 RALA (ENSAPLG00000004950) #23 CDK13 (ENSAPLG00000004750) #25 MPLKIP (ENSAPLG00000030999) #26 SUGCT (ENSAPLG00000004741) #27 INHBA (ENSAPLG00000018903) #28 ENSAPLG00000030837 GLI3 (ENSAPLG00000004361) #29 C7orf25 (ENSAPLG00000000791) #30 PSMA2 (ENSAPLG00000022687) #31 MRPL32 (ENSAPLG00000004159) #32 ENSAPLG00000028375 ENSAPLG00000029678 HECW1 (ENSAPLG00000004015) #33 STK17A (ENSAPLG00000003875) #34 Phasianidae ANCESTRAL SPECIES 1 ENSGT00500000045246 ENSGT00940000156069 ENSGT00390000010255 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503.c ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153143.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00390000011072 ENSGT00390000015821 ENSGT00530000063186.b.a Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000162490 ENSGT00500000045246 ENSGT00940000156069 ENSGT00390000010255 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503.c ENSGT00730000111139 ENSGT00530000063564.a ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00390000011072 ENSGT00390000015821 ENSGT00530000063186.b.a Turkey MODERN SPECIES 26 PDE1C (ENSMGAG00000012120) PPP1R17 (ENSMGAG00000012140) ITPRID1 (ENSMGAG00000018892) NEUROD6 (ENSMGAG00000012144) ITGA9 (ENSMGAG00000012147) ENSMGAG00000012166 LRRFIP2 (ENSMGAG00000012175) ENSMGAG00000023004 ##17 ENSMGAG00000012187 ##17 ENSMGAG00000019487 ENSMGAG00000012196 ##17 VPS41 (ENSMGAG00000012204) #20 ENSMGAG00000017948 #21 ENSMGAG00000022796 #21 ENSMGAG00000012235 #21 YAE1 (ENSMGAG00000012240) #22 ENSMGAG00000018557 RALA (ENSMGAG00000012244) #23 ENSMGAG00000012248 #25 SUGCT (ENSMGAG00000016958) #27 INHBA (ENSMGAG00000012273) #28 GLI3 (ENSMGAG00000012277) #29 C7orf25 (ENSMGAG00000015903) #30 PSMA2 (ENSMGAG00000012294) #31 MRPL32 (ENSMGAG00000012299) #32 HECW1 (ENSMGAG00000012302) #33 STK17A (ENSMGAG00000012311) #34 BLVRA (ENSMGAG00000012314) VOPP1 (ENSMGAG00000019269) LANCL2 (ENSMGAG00000012323) EGFR (ENSMGAG00000012330) Chicken MODERN SPECIES 11 ENSGALG00010017769 ENSGALG00010017777 ##17 ENSGALG00010017784 ENSGALG00010017788 ENSGALG00010017794 ENSGALG00010017800 TRGV9 (ENSGALG00010017802) ##17 ENSGALG00010017827 ENSGALG00010017840 ENSGALG00010017854 ENSGALG00010017624 ENSGALG00010017618 AMPH (ENSGALG00010017970) #18 VPS41 (ENSGALG00010016583) #20 POU6F2 (ENSGALG00010016637) #21 YAE1 (ENSGALG00010017824) #22 ENSGALG00010017833 RALA (ENSGALG00010017866) #23 CDK13 (ENSGALG00010017880) #25 MPLKIP (ENSGALG00010017888) #26 SUGCT (ENSGALG00010018049) #27 INHBA (ENSGALG00010007868) #28 GLI3 (ENSGALG00010007884) #29 C2H7orf25 (ENSGALG00010007902) #30 PSMA2 (ENSGALG00010007903) #31 ENSGALG00010007904 #31 MRPL32 (ENSGALG00010007905) #32 HECW1 (ENSGALG00010007915) #33 STK17A (ENSGALG00010007925) #34 BLVRA (ENSGALG00010007133) ENSGALG00010007145 Japanese quail MODERN SPECIES 11 HERPUD2 (ENSCJPG00005006731) SEPTIN7 (ENSCJPG00005006717) ENSCJPG00005006662 ENSCJPG00005006548 GOLGA4 (ENSCJPG00005006522) LRRFIP2 (ENSCJPG00005006441) ENSCJPG00005006436 ##17 ENSCJPG00005006435 ENSCJPG00005006434 ##17 ENSCJPG00005006429 ##17 ENSCJPG00005006427 ENSCJPG00005006420 ##17 AMPH (ENSCJPG00005006395) #18 VPS41 (ENSCJPG00005006272) #20 POU6F2 (ENSCJPG00005006245) #21 YAE1 (ENSCJPG00005006226) #22 ENSCJPG00005006220 RALA (ENSCJPG00005006219) #23 CDK13 (ENSCJPG00005006217) #25 MPLKIP (ENSCJPG00005006216) #26 SUGCT (ENSCJPG00005006209) #27 INHBA (ENSCJPG00005006189) #28 GLI3 (ENSCJPG00005006179) #29 EZH2 (ENSCJPG00005006124) CUL1 (ENSCJPG00005006103) CNTNAP2 (ENSCJPG00005000658) TPK1 (ENSCJPG00005000332) C7orf25 (ENSCJPG00005000320) #30 PSMA2 (ENSCJPG00005000303) #31 MRPL32 (ENSCJPG00005000292) #32 HECW1 (ENSCJPG00005000252) #33 Neognathae_b ANCESTRAL SPECIES 3 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153143.a.b.a.a.a ##17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00960000189317 ENSGT00940000153143.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Passeriformes ANCESTRAL SPECIES ENSGT00940000157657 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153143.a.b.a.a.a ##17 ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00960000189317 ENSGT00960000190022 ENSGT00940000153143.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Great tit MODERN SPECIES 11 VPS41 (ENSPMJG00000018123) #20 AMPH (ENSPMJG00000018122) #18 ENSPMJG00000018121 ENSPMJG00000018120 ##17 ENSPMJG00000018067 ##17 LRRFIP2 (ENSPMJG00000018066) GOLGA4 (ENSPMJG00000018065) ITGA9 (ENSPMJG00000018064) NEUROD6 (ENSPMJG00000018063) ENSPMJG00000018062 PDE1C (ENSPMJG00000018061) ENSPMJG00000018060 NFX1 (ENSPMJG00000018059) ENSPMJG00000018057 HUS1 (ENSPMJG00000018055) YAE1 (ENSPMJG00000018053) #22 ENSPMJG00000018052 RALA (ENSPMJG00000018050) #23 CDK13 (ENSPMJG00000018048) #25 MPLKIP (ENSPMJG00000018047) #26 SUGCT (ENSPMJG00000018046) #27 INHBA (ENSPMJG00000018042) #28 GLI3 (ENSPMJG00000018041) #29 C7orf25 (ENSPMJG00000018040) #30 PSMA2 (ENSPMJG00000018039) #31 MRPL32 (ENSPMJG00000018038) #32 TNS3 (ENSPMJG00000018037) COA1 (ENSPMJG00000018036) STK17A (ENSPMJG00000018035) #34 HECW1 (ENSPMJG00000018034) #33 BLVRA (ENSPMJG00000018033) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000156325 ENSGT00940000157657 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00960000189317 ENSGT00960000190022 ENSGT00940000153143.a.b.a.b ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT01030000235253.d.b ENSGT00390000011072 Flycatcher MODERN SPECIES 11 HUS1 (ENSFALG00000013176) ENSFALG00000026671 ENSFALG00000013143 ENSFALG00000013128 PPP1R17 (ENSFALG00000023160) PDE1C (ENSFALG00000013120) ENSFALG00000014089 ITGA9 (ENSFALG00000013091) ENSFALG00000013077 LRRFIP2 (ENSFALG00000012219) ENSFALG00000023119 ENSFALG00000012205 ##17 AMPH (ENSFALG00000012192) #18 VPS41 (ENSFALG00000005238) #20 POU6F2 (ENSFALG00000005224) #21 YAE1 (ENSFALG00000027550) #22 ENSFALG00000025369 RALA (ENSFALG00000027253) #23 CDK13 (ENSFALG00000005143) #25 MPLKIP (ENSFALG00000027312) #26 SUGCT (ENSFALG00000005131) #27 INHBA (ENSFALG00000005123) #28 GLI3 (ENSFALG00000005113) #29 C7orf25 (ENSFALG00000014114) #30 PSMA2 (ENSFALG00000005082) #31 MRPL32 (ENSFALG00000027975) #32 HECW1 (ENSFALG00000005053) #33 STK17A (ENSFALG00000028529) #34 COA1 (ENSFALG00000005023) ENSFALG00000025406 ENSFALG00000024388 Passeriformes_g ANCESTRAL SPECIES 6 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00960000189447 ENSGT00960000189317 ENSGT00960000190022 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT01030000235253.d.b ENSGT00390000011072 Medium ground finch MODERN SPECIES 96 AMPH (ENSGFOG00000005869) #18 VPS41 (ENSGFOG00000005873) #20 ENSGFOG00000005884 POU6F2 (ENSGFOG00000005890) #21 YAE1 (ENSGFOG00000005898) #22 RALA (ENSGFOG00000005906) #23 ENSGFOG00000005913 ENSGFOG00000005917 #25 SUGCT (ENSGFOG00000005923) #27 INHBA (ENSGFOG00000005930) #28 GLI3 (ENSGFOG00000005932) #29 C7orf25 (ENSGFOG00000005939) #30 PSMA2 (ENSGFOG00000005943) #31 MRPL32 (ENSGFOG00000005947) #32 HECW1 (ENSGFOG00000006006) #33 STK17A (ENSGFOG00000006349) #34 COA1 (ENSGFOG00000006359) BLVRA (ENSGFOG00000006368) VOPP1 (ENSGFOG00000006377) LANCL2 (ENSGFOG00000006387) Passeroidea ANCESTRAL SPECIES 6 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00960000189447 ENSGT00960000189317 ENSGT00960000190022 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT01030000235253.d.b ENSGT00390000011072 Common canary MODERN SPECIES 75 VPS41 (ENSSCAG00000016765) #20 POU6F2 (ENSSCAG00000016770) #21 YAE1 (ENSSCAG00000016776) #22 RALA (ENSSCAG00000016777) #23 AMPH (ENSSCAG00000016806) #18 ENSSCAG00000016822 ENSSCAG00000016824 ENSSCAG00000016825 ENSSCAG00000016826 #17 LRRFIP2 (ENSSCAG00000016829) GOLGA4 (ENSSCAG00000016833) ITGA9 (ENSSCAG00000016844) Zebra finch MODERN SPECIES 12 MC4R (ENSTGUG00000027462) C5orf22 (ENSTGUG00000001970) DROSHA (ENSTGUG00000001955) CDH6 (ENSTGUG00000001940) CDH9 (ENSTGUG00000001934) CDH10 (ENSTGUG00000001926) CDH12 (ENSTGUG00000001914) NEUROD6 (ENSTGUG00000001910) ITGA9 (ENSTGUG00000001897) GOLGA4 (ENSTGUG00000001889) LRRFIP2 (ENSTGUG00000001878) ENSTGUG00000001876 ##17 AMPH (ENSTGUG00000001869) #18 VPS41 (ENSTGUG00000001860) #20 POU6F2 (ENSTGUG00000001859) #21 YAE1 (ENSTGUG00000020380) #22 ENSTGUG00000001857 RALA (ENSTGUG00000001854) #23 CDK13 (ENSTGUG00000001850) #25 MPLKIP (ENSTGUG00000001848) #26 ENSTGUG00000025137 SUGCT (ENSTGUG00000001844) #27 INHBA (ENSTGUG00000001843) #28 GLI3 (ENSTGUG00000001834) #29 C7orf25 (ENSTGUG00000001831) #30 PSMA2 (ENSTGUG00000001827) #31 MRPL32 (ENSTGUG00000001824) #32 HECW1 (ENSTGUG00000001817) #33 STK17A (ENSTGUG00000029061) #34 COA1 (ENSTGUG00000022951) ENSTGUG00000021649 Neognathae_c ANCESTRAL SPECIES 1 ENSGT00940000156069 ENSGT00390000010255 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153143.a.b.a.a.b ##17 ENSGT00960000189317 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Kakapo MODERN SPECIES ENSSHBG00005017189 ENSSHBG00005017187 LSM5 (ENSSHBG00005017180) PDE1C (ENSSHBG00005011595) PPP1R17 (ENSSHBG00005010967) ITPRID1 (ENSSHBG00005010923) NEUROD6 (ENSSHBG00005010889) ITGA9 (ENSSHBG00005010802) GOLGA4 (ENSSHBG00005010661) LRRFIP2 (ENSSHBG00005010595) ENSSHBG00005010565 ENSSHBG00005010323 ##17 AMPH (ENSSHBG00005010255) #18 VPS41 (ENSSHBG00005010160) #20 POU6F2 (ENSSHBG00005010129) #21 YAE1 (ENSSHBG00005010111) #22 RALA (ENSSHBG00005010092) #23 CDK13 (ENSSHBG00005010070) #25 MPLKIP (ENSSHBG00005010053) #26 SUGCT (ENSSHBG00005010027) #27 INHBA (ENSSHBG00005010004) #28 ENSSHBG00005009976 ENSSHBG00005009956 ENSSHBG00005009929 #29 ENSSHBG00005009918 #29 C7orf25 (ENSSHBG00005009911) #30 PSMA2 (ENSSHBG00005009895) #31 MRPL32 (ENSSHBG00005000086) #32 HECW1 (ENSSHBG00005000081) #33 STK17A (ENSSHBG00005000074) #34 COA1 (ENSSHBG00005000068) Golden eagle MODERN SPECIES 19 ENSACCG00020006380 SH3BP5 (ENSACCG00020006371) CAPN7 (ENSACCG00020006334) PDE1C (ENSACCG00020005818) PPP1R17 (ENSACCG00020005253) NEUROD6 (ENSACCG00020005245) ENSACCG00020005241 ITGA9 (ENSACCG00020005192) GOLGA4 (ENSACCG00020005089) LRRFIP2 (ENSACCG00020005021) TRGV9 (ENSACCG00020004981) ##17 ENSACCG00020004904 AMPH (ENSACCG00020004821) #18 VPS41 (ENSACCG00020004789) #20 POU6F2 (ENSACCG00020004747) #21 YAE1 (ENSACCG00020004724) #22 ENSACCG00020004712 RALA (ENSACCG00020004699) #23 CDK13 (ENSACCG00020004693) #25 MPLKIP (ENSACCG00020004525) #26 SUGCT (ENSACCG00020004494) #27 INHBA (ENSACCG00020004471) #28 GLI3 (ENSACCG00020004461) #29 C7orf25 (ENSACCG00020004448) #30 PSMA2 (ENSACCG00020004444) #31 MRPL32 (ENSACCG00020004436) #32 HECW1 (ENSACCG00020004403) #33 STK17A (ENSACCG00020004387) #34 COA1 (ENSACCG00020004380) BLVRA (ENSACCG00020004370) VOPP1 (ENSACCG00020004361) African ostrich MODERN SPECIES 767 ENSSCUG00000011874 ENSSCUG00000011873 AMPH (ENSSCUG00000011855) #18 VPS41 (ENSSCUG00000011848) #20 POU6F2 (ENSSCUG00000011841) #21 YAE1 (ENSSCUG00000011840) #22 RALA (ENSSCUG00000011839) #23 CDK13 (ENSSCUG00000011837) #25 SUGCT (ENSSCUG00000011834) #27 INHBA (ENSSCUG00000011831) #28 GLI3 (ENSSCUG00000011829) #29 C7orf25 (ENSSCUG00000011826) #30 PSMA2 (ENSSCUG00000011825) #31 MRPL32 (ENSSCUG00000011824) #32 HECW1 (ENSSCUG00000011817) #33 STK17A (ENSSCUG00000011807) #34 COA1 (ENSSCUG00000011805) BLVRA (ENSSCUG00000011803) VOPP1 (ENSSCUG00000011801) LANCL2 (ENSSCUG00000011800) EGFR (ENSSCUG00000011799) Lepidosauria ANCESTRAL SPECIES 5 ENSGT00390000017671.a ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000008749.e ENSGT00390000008427 ENSGT00940000155994.`b ENSGT01030000234518.E.c.a ENSGT00940000161182 #16 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00960000190657 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Episquamata ANCESTRAL SPECIES 5 ENSGT00390000011072 ENSGT00940000161552 ENSGT00440000033985 ENSGT00940000154014.a #34 ENSGT00940000158294 #33 ENSGT00390000014996 #32 ENSGT00550000074870 #31 ENSGT00390000014722 #30 ENSGT00960000190657 ENSGT00940000155925 #29 ENSGT00940000157116 #28 ENSGT00940000157866 #27 ENSGT00390000002582 #26 ENSGT00940000157852 #25 ENSGT00940000155142 #23 ENSGT00390000011176 #22 ENSGT00940000156175 #21 ENSGT00390000000481 #20 ENSGT00950000182882.A.b.a #18 ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 #16 ENSGT01030000234518.E.c.a ENSGT00940000155994.`b ENSGT00390000008427 ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00390000009677 ENSGT00940000154222.d.b ENSGT00390000017671.a Toxicofera ANCESTRAL SPECIES 4 ENSGT00390000011072 ENSGT00940000161552 ENSGT00440000033985 ENSGT00940000154014.a #34 ENSGT00940000158294 #33 ENSGT00390000014996 #32 ENSGT00550000074870 #31 ENSGT00390000014722 #30 ENSGT00960000190657 ENSGT00940000155925 #29 ENSGT00940000157116 #28 ENSGT00940000157866 #27 ENSGT00390000002582 #26 ENSGT00940000157852 #25 ENSGT00940000155142 #23 ENSGT00390000011176 #22 ENSGT00940000156175 #21 ENSGT00390000000481 #20 ENSGT00950000182882.A.b.a #18 ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 #16 ENSGT00940000155994.`b ENSGT00940000155994.ab ENSGT00390000008427 ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00390000009677 ENSGT00940000154222.d.b ENSGT00390000017671.a Lizard DUPLICATION Lizard MODERN SPECIES 5 STK17A (ENSACAG00000017481) #34 ENSACAG00000039276 ENSACAG00000041080 HECW1 (ENSACAG00000017492) #33 MRPL32 (ENSACAG00000045596) #32 PSMA2 (ENSACAG00000017511) #31 GLI3 (ENSACAG00000017547) #29 INHBA (ENSACAG00000017576) #28 ENSACAG00000038360 ENSACAG00000045115 ENSACAG00000042768 SUGCT (ENSACAG00000017581) #27 MPLKIP (ENSACAG00000017596) #26 ENSACAG00000017597 #25 RALA (ENSACAG00000017605) #23 YAE1 (ENSACAG00000039349) #22 POU6F2 (ENSACAG00000017612) #21 VPS41 (ENSACAG00000017617) #20 AMPH (ENSACAG00000017651) #18 STARD3NL (ENSACAG00000017658) EPDR1 (ENSACAG00000017665) SFRP4 (ENSACAG00000043956) ENSACAG00000017678 #16 ENSACAG00000035786 #16 GPR141 (ENSACAG00000037026) ENSACAG00000043399 ENSACAG00000044595 ENSACAG00000017690 ENSACAG00000041833 ENSACAG00000042081 AOAH (ENSACAG00000021042) Lizard MODERN SPECIES 803 DUS2 (ENSACAG00000009757) NFATC3 (ENSACAG00000009839) ESRP2 (ENSACAG00000009900) ENSACAG00000009959 PLA2G15 (ENSACAG00000009961) SMPD3 (ENSACAG00000010068) PRMT7 (ENSACAG00000010119) SLC7A6OS (ENSACAG00000010238) ENSACAG00000044839 SLC7A6 (ENSACAG00000010249) ENSACAG00000010464 ENSACAG00000022434 OSGIN1 (ENSACAG00000043802) ENSACAG00000000883 ENSACAG00000014921 ENSACAG00000045133 #22 ENSACAG00000037782 ENSACAG00000036811 CDH11 (ENSACAG00000015087) ENSACAG00000039656 ENSACAG00000028252 ENSACAG00000040850 ENSACAG00000042140 CDH5 (ENSACAG00000000593) Elapidae ANCESTRAL SPECIES 5 ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a #34 ENSGT00940000158294 #33 ENSGT00390000014996 #32 ENSGT00550000074870 #31 ENSGT00390000014722 #30 ENSGT00960000190657 ENSGT00940000155925 #29 ENSGT00940000157116.c #28 ENSGT00940000157866 #27 ENSGT00390000002582 #26 ENSGT00940000157852 #25 ENSGT00940000155142 #23 ENSGT00390000011176 #22 ENSGT00940000156175 #21 ENSGT00390000000481.c #20 ENSGT00950000182882.A.b.a #18 ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 #16 ENSGT00940000155994.`b ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00390000009677 ENSGT00940000154222.d.b ENSGT00390000017671.a ENSGT00940000158741 ENSGT00530000063023.B Indian cobra MODERN SPECIES 337 STK17A (ENSNNAG00000016944) #34 HECW1 (ENSNNAG00000016919) #33 ENSNNAG00000016899 #32 ENSNNAG00000016905 #32 PSMA2 (ENSNNAG00000016886) #31 C7orf25 (ENSNNAG00000016877) #30 ENSNNAG00000016871 ENSNNAG00000016864 #29 ENSNNAG00000016808 #29 ENSNNAG00000016795 INHBA (ENSNNAG00000016787) #28 SUGCT (ENSNNAG00000016772) #27 MPLKIP (ENSNNAG00000016769) #26 CDK13 (ENSNNAG00000016699) #25 RALA (ENSNNAG00000016685) #23 ENSNNAG00000016677 #22 POU6F2 (ENSNNAG00000016626) #21 ENSNNAG00000016613 ENSNNAG00000016605 ENSNNAG00000016597 #20 ENSNNAG00000016573 #20 AMPH (ENSNNAG00000016556) #18 STARD3NL (ENSNNAG00000016543) EPDR1 (ENSNNAG00000016541) SFRP4 (ENSNNAG00000016535) NME8 (ENSNNAG00000016510) #16 ENSNNAG00000016505 ELMO1 (ENSNNAG00000016290) ANLN (ENSNNAG00000016043) MATCAP2 (ENSNNAG00000015988) EEPD1 (ENSNNAG00000015981) Elapidae_a ANCESTRAL SPECIES 40 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a #34 ENSGT00940000158294 #33 ENSGT00390000014996 #32 ENSGT00550000074870 #31 ENSGT00390000014722 #30 ENSGT00940000155925 #29 ENSGT00940000157116.c #28 ENSGT00940000157866 #27 ENSGT00390000002582 #26 ENSGT00940000157852 #25 ENSGT00940000155142 #23 ENSGT00390000011176 #22 ENSGT00940000156175 #21 ENSGT00390000000481.c #20 ENSGT00950000182882.A.b.a #18 ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 #16 ENSGT00940000155994.`b ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00390000009677 ENSGT00940000154222.d.b ENSGT00390000017671.a ENSGT00940000158741 ENSGT00530000063023.B Blue-lipped sea krait MODERN SPECIES 9855 ENSLLTG00000017503 #22 Acanthophiinae ANCESTRAL SPECIES 41 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a #34 ENSGT00940000158294 #33 ENSGT00390000014996 #32 ENSGT00550000074870 #31 ENSGT00390000014722 #30 ENSGT00940000155925 #29 ENSGT00940000157116.c #28 ENSGT00940000157866 #27 ENSGT00390000002582 #26 ENSGT00940000157852 #25 ENSGT00940000155142 #23 ENSGT00390000011176 #22 ENSGT00940000156175 #21 ENSGT00390000000481.c #20 ENSGT00950000182882.A.b.a #18 ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 #16 ENSGT00940000155994.`b ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00390000009677 ENSGT00940000154222.d.b ENSGT00390000017671.a ENSGT00940000158741 ENSGT00530000063023.B Mainland tiger snake MODERN SPECIES 66 ENSNSUG00000010354 SUGCT (ENSNSUG00000010355) #27 MPLKIP (ENSNSUG00000010364) #26 CDK13 (ENSNSUG00000010365) #25 RALA (ENSNSUG00000010367) #23 ENSNSUG00000010368 #22 POU6F2 (ENSNSUG00000010370) #21 VPS41 (ENSNSUG00000010376) #20 AMPH (ENSNSUG00000010522) #18 STARD3NL (ENSNSUG00000010524) EPDR1 (ENSNSUG00000010528) SFRP4 (ENSNSUG00000010529) NME8 (ENSNSUG00000010530) #16 ELMO1 (ENSNSUG00000010531) ANLN (ENSNSUG00000010539) MATCAP2 (ENSNSUG00000010841) EEPD1 (ENSNSUG00000010900) SEPTIN7 (ENSNSUG00000010901) ENSNSUG00000010903 HERPUD2 (ENSNSUG00000010904) TBX20 (ENSNSUG00000010907) Eastern brown snake MODERN SPECIES 18 ENSPTXG00000001621 ENSPTXG00000001618 ENSPTXG00000001615 ENSPTXG00000001613 ENSPTXG00000001610 ENSPTXG00000001608 GLI3 (ENSPTXG00000001606) #29 ENSPTXG00000001602 ENSPTXG00000001599 #28 ENSPTXG00000001595 SUGCT (ENSPTXG00000001594) #27 MPLKIP (ENSPTXG00000001593) #26 CDK13 (ENSPTXG00000001591) #25 ENSPTXG00000001589 RALA (ENSPTXG00000001587) #23 ENSPTXG00000001585 #22 POU6F2 (ENSPTXG00000001581) #21 ENSPTXG00000001576 VPS41 (ENSPTXG00000001571) #20 AMPH (ENSPTXG00000001568) #18 ENSPTXG00000001567 STARD3NL (ENSPTXG00000001565) EPDR1 (ENSPTXG00000001562) SFRP4 (ENSPTXG00000001554) NME8 (ENSPTXG00000001550) #16 ENSPTXG00000001544 ELMO1 (ENSPTXG00000000925) ANLN (ENSPTXG00000000893) MATCAP2 (ENSPTXG00000000873) EEPD1 (ENSPTXG00000000872) SEPTIN7 (ENSPTXG00000000871) Laterata ANCESTRAL SPECIES 39 ENSGT00390000015821 ENSGT00390000011072 ENSGT00940000161552 ENSGT00440000033985 ENSGT00940000154014.a #34 ENSGT00940000158294 #33 ENSGT00390000014996 #32 ENSGT00550000074870 #31 ENSGT00390000014722 #30 ENSGT00940000155925 #29 ENSGT00940000157116 #28 ENSGT00940000157866 #27 ENSGT00390000002582 #26 ENSGT00940000157852 #25 ENSGT00940000155142 #23 ENSGT00390000011176 #22 ENSGT00940000156175 #21 ENSGT00390000000481 #20 ENSGT00950000182882.A.b.a #18 ENSGT00940000155476 ENSGT00940000161910 ENSGT00940000160766 ENSGT00940000161182 #16 ENSGT01030000234518.E.c.a ENSGT00940000155994.`b ENSGT00390000008427 ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00390000009677 ENSGT00940000154222.d.b ENSGT00390000017671.a Common wall lizard MODERN SPECIES 3 COA1 (ENSPMRG00000016416) STK17A (ENSPMRG00000016409) #34 HECW1 (ENSPMRG00000016147) #33 ENSPMRG00000016069 ENSPMRG00000016068 #31 ENSPMRG00000016061 #32 ENSPMRG00000016054 #32 PSMA2 (ENSPMRG00000016045) #31 C7orf25 (ENSPMRG00000016040) #30 GLI3 (ENSPMRG00000016011) #29 INHBA (ENSPMRG00000016000) #28 SUGCT (ENSPMRG00000015882) #27 MPLKIP (ENSPMRG00000015844) #26 CDK13 (ENSPMRG00000015785) #25 RALA (ENSPMRG00000015762) #23 YAE1 (ENSPMRG00000015754) #22 POU6F2 (ENSPMRG00000015743) #21 VPS41 (ENSPMRG00000015677) #20 ENSPMRG00000015546 #18 STARD3NL (ENSPMRG00000015515) EPDR1 (ENSPMRG00000015506) ENSPMRG00000015500 NME8 (ENSPMRG00000015486) #16 ENSPMRG00000015482 ENSPMRG00000015477 ENSPMRG00000015471 ELMO1 (ENSPMRG00000015324) AOAH (ENSPMRG00000015286) ANLN (ENSPMRG00000015224) MATCAP2 (ENSPMRG00000015201) EEPD1 (ENSPMRG00000015195) tuatara MODERN SPECIES 1137 ENSSPUG00000014276 #21 YAE1 (ENSSPUG00000014295) #22 RALA (ENSSPUG00000014308) #23 ENSSPUG00000014322 #25 MPLKIP (ENSSPUG00000014336) #26 SUGCT (ENSSPUG00000014343) #27 Anura ANCESTRAL SPECIES 71 ENSGT00950000182882.A.b.a #18 ENSGT00970000195704 ENSGT00940000153143.a.b.b #17 ENSGT00940000155476.s ENSGT00940000161910 ENSGT00940000160766 ENSGT01030000234518.E.c.a.a ENSGT00940000155994 ENSGT00390000008427 ENSGT00390000008749.e ENSGT00390000004417.a.l ENSGT00390000009677 ENSGT00940000154222.d.b ENSGT00390000017671.a ENSGT00940000158741 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582.o #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 ENSGT00390000014722 #30 ENSGT00550000074870 #31 ENSGT00390000014996 #32 ENSGT00940000158294 #33 ENSGT00940000154014.a #34 ENSGT00440000033985 ENSGT00390000011072 ENSGT00390000015821 Leishan spiny toad MODERN SPECIES 8 EPDR1 (ENSLLEG00000013696) SFRP4 (ENSLLEG00000013662) ENSLLEG00000013627 ENSLLEG00000013590 ENSLLEG00000013561 ELMO1 (ENSLLEG00000012811) AOAH (ENSLLEG00000012470) ANLN (ENSLLEG00000011963) MATCAP2 (ENSLLEG00000011791) EEPD1 (ENSLLEG00000011683) ENSLLEG00000011650 SEPTIN7 (ENSLLEG00000010750) ENSLLEG00000010654 HERPUD2 (ENSLLEG00000010499) TBX20 (ENSLLEG00000010423) YAE1 (ENSLLEG00000010386) #22 ENSLLEG00000010159 ENSLLEG00000010126 ENSLLEG00000010099 RALA (ENSLLEG00000010011) #23 CDK13 (ENSLLEG00000009879) #25 MPLKIP (ENSLLEG00000009797) #26 ENSLLEG00000009770 ENSLLEG00000009741 SUGCT (ENSLLEG00000009369) #27 ENSLLEG00000009328 ENSLLEG00000009313 INHBA (ENSLLEG00000009251) #28 GLI3 (ENSLLEG00000008862) #29 ENSLLEG00000008818 ENSLLEG00000008792 Actinopterygii ANCESTRAL SPECIES 251 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.b #17 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00660000095569.c ENSGT00940000155142 #23 ENSGT00940000157852 #25 ENSGT00390000002582 #26 ENSGT00940000157866 #27 ENSGT00940000157116 #28 ENSGT00940000155925 #29 Neopterygii ANCESTRAL SPECIES 203 ENSGT00730000111020.b.a ENSGT00940000153725.a.b.b ENSGT00940000158957 ENSGT00940000157305 ENSGT00390000004118 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00940000153143.a.b.a ##17 ENSGT00950000182882.A.b.a #18 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189 ENSGT00940000155285.b.j ENSGT00390000015159.b ENSGT00940000165526 ENSGT00940000158547 ENSGT00940000156325 Osteoglossocephalai ANCESTRAL SPECIES 58 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189 ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b ENSGT00940000158547.d ENSGT00390000014069.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000155594.c.b Osteoglossiformes ANCESTRAL SPECIES 375 ENSGT01030000234518.E.c.b ENSGT00940000160766.a ENSGT00950000182882.A.b.a.x #18 ENSGT00390000000481 #20 ENSGT00940000156175.c #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.a ENSGT00940000155285.b.j.b ENSGT00390000015159.b.d ENSGT00940000158547.d ENSGT00390000014069.a ENSGT00940000166257 Asian bonytongue MODERN SPECIES 18 FARP2 (ENSSFOG00015015409) ENSSFOG00015031070 sox14 (ENSSFOG00015015459) CLDN18 (ENSSFOG00015015473) med8 (ENSSFOG00015015491) zgc:109982 (ENSSFOG00015015521) ncf2 (ENSSFOG00015015549) garem (ENSSFOG00015015612) SZT2 (ENSSFOG00015015645) hyi (ENSSFOG00015015784) RNF182 (ENSSFOG00015015797) ENSSFOG00015015807 SFRP4 (ENSSFOG00015015826) vps41 (ENSSFOG00015015870) #20 POU6F2 (ENSSFOG00015015897) #21 otulina (ENSSFOG00015025439) #22 OTULIN (ENSSFOG00015015927) KCNJ10 (ENSSFOG00015015941) ENSSFOG00015026520 ENSSFOG00015015958 ENSSFOG00015015991 ENSSFOG00015016020 ndufs2 (ENSSFOG00015016033) KIRREL1 (ENSSFOG00015016073) PIP4P1 (ENSSFOG00015026379) zgc:77880 (ENSSFOG00015016117) zgc:153146 (ENSSFOG00015016159) snx25 (ENSSFOG00015016180) ENSSFOG00015016228 irf2 (ENSSFOG00015016268) enpp6 (ENSSFOG00015016299) P. kingsleyae MODERN SPECIES 85 ENSPKIG00000017986 ENSPKIG00000017959 cavin4b (ENSPKIG00000017945) ENSPKIG00000017895 ENSPKIG00000017846 ENSPKIG00000017823 gprc5ba (ENSPKIG00000017809) RNF182 (ENSPKIG00000017797) zgc:165532 (ENSPKIG00000017770) ENSPKIG00000017739 SFRP4 (ENSPKIG00000017725) ENSPKIG00000017680 AMPH (ENSPKIG00000017616) #18 vps41 (ENSPKIG00000017570) #20 POU6F2 (ENSPKIG00000017536) #21 otulina (ENSPKIG00000017520) #22 ENSPKIG00000017476 ANKH (ENSPKIG00000017445) ENSPKIG00000017428 mycb (ENSPKIG00000017411) ENSPKIG00000017320 eef1a1l3 (ENSPKIG00000017246) ASAP1 (ENSPKIG00000017059) NFX1 (ENSPKIG00000016899) ENSPKIG00000016855 ENSPKIG00000016807 ENSPKIG00000016787 SMARCD3 (ENSPKIG00000016701) CHPF2 (ENSPKIG00000016657) abcf2b (ENSPKIG00000016624) ENSPKIG00000016606 Clupeocephala ANCESTRAL SPECIES 150 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT01050000244890.a.b.b.d ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709 ENSGT00390000004989.a.b Otomorpha ANCESTRAL SPECIES 135 ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945.u.a ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT01050000244890.a.b.b.d ENSGT00940000155633.D ENSGT00530000063834.e.a ENSGT00530000063843.b ENSGT00940000153694.B Otophysi ANCESTRAL SPECIES 292 ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 Cyprinoidei ANCESTRAL SPECIES 124 ENSGT00400000023815 ENSGT00390000011379 ENSGT00940000160982 ENSGT00940000156220.k ENSGT00940000155230 ENSGT00510000049635 ENSGT00940000156098.a ENSGT01100000263537.b.a.a.b.b ENSGT00940000156398 ENSGT00940000156177 ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 Cyprininae ANCESTRAL SPECIES 156 ENSGT00670000098076.f ENSGT00940000160982.y ENSGT00940000156220.k.g ENSGT00940000155230.ac ENSGT00510000049635.a.b ENSGT00940000156098.a.n ENSGT01100000263537.b.a.a.b.b.f ENSGT00940000156398.g ENSGT00940000156177.a ENSGT00940000157001.h ENSGT00390000000626.d ENSGT00390000000805.jb ENSGT00390000000481.k #20 ENSGT00940000156175.f #21 ENSGT00960000187176 ENSGT00390000011176 #22 ENSGT00390000009802.b.e.a ENSGT00390000012189.c.b.d ENSGT00940000155285.b.j.a.b.a ENSGT00390000015159.b.a.a.a ENSGT00940000165526.b ENSGT00940000158547.c.a ENSGT00940000162556.B.a.b ENSGT00940000159257.d ENSGT00730000111180.k ENSGT00390000005489.e ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a.d ENSGT00940000160993.e ENSGT00390000009209.o.a ENSGT00940000155562.l.b.a Goldfish DUPLICATION Goldfish MODERN SPECIES 16 nanog (ENSCARG00000061980) IPO4 (ENSCARG00000062006) pdcd6 (ENSCARG00000051447) DLGAP1 (ENSCARG00000051592) tgif1 (ENSCARG00000052093) ENSCARG00000052116 ENSCARG00000052161 ENSCARG00000052518 nphp3 (ENSCARG00000052550) uba5 (ENSCARG00000052644) topbp1 (ENSCARG00000053303) ENSCARG00000053840 cdv3 (ENSCARG00000053848) vps41 (ENSCARG00000054045) #20 POU6F2 (ENSCARG00000056161) #21 otulina (ENSCARG00000056241) #22 ENSCARG00000056263 ankha (ENSCARG00000056356) myc (ENSCARG00000056880) ENSCARG00000056898 gli3 (ENSCARG00000056913) #29 ENSCARG00000056931 ENSCARG00000056937 prpf4bb (ENSCARG00000056977) PXDC1 (ENSCARG00000057584) acad11 (ENSCARG00000057621) ackr4b (ENSCARG00000057837) myripb (ENSCARG00000057876) ENSCARG00000057916 ENSCARG00000057924 zfand1 (ENSCARG00000057943) Goldfish MODERN SPECIES 43 bmi1a (ENSCARG00000069102) spag6 (ENSCARG00000069120) pdia4 (ENSCARG00000069134) ezh2 (ENSCARG00000069163) cul1b (ENSCARG00000069205) CNTNAP2 (ENSCARG00000069395) tpk1 (ENSCARG00000069712) sec61g (ENSCARG00000069727) zgc:112332 (ENSCARG00000069732) ENSCARG00000069744 relch (ENSCARG00000069781) CSPP1 (ENSCARG00000069942) ARFGEF1 (ENSCARG00000069998) CPA6 (ENSCARG00000070106) PREX2 (ENSCARG00000070132) otulina (ENSCARG00000070164) #22 ENSCARG00000070163 ankha (ENSCARG00000070167) myca (ENSCARG00000070169) fam49bb (ENSCARG00000070170) ASAP1 (ENSCARG00000070188) ENSCARG00000070203 ENSCARG00000070205 wdr37 (ENSCARG00000070215) idi1 (ENSCARG00000070221) slc35g2b (ENSCARG00000070223) NCK1 (ENSCARG00000070225) gyg1b (ENSCARG00000070229) sugct (ENSCARG00000070232) #27 inhbaa (ENSCARG00000070235) #28 ENSCARG00000070236 Zebrafish MODERN SPECIES 16 nphp3 (ENSDARG00000078261) uba5 (ENSDARG00000063588) topbp1 (ENSDARG00000059322) ENSDARG00000090230 cdv3 (ENSDARG00000023028) vps41 (ENSDARG00000063573) #20 zgc:171977 (ENSDARG00000092885) zgc:152652 (ENSDARG00000095281) ENSDARG00000093216 zgc:171750 (ENSDARG00000078638) ENSDARG00000092924 zgc:173856 (ENSDARG00000045424) ENSDARG00000045423 POU6F2 (ENSDARG00000086362) #21 ENSDARG00000073931 otulina (ENSDARG00000045422) #22 ENSDARG00000095829 ankha (ENSDARG00000071724) ENSDARG00000098036 myca (ENSDARG00000045695) fam49bb (ENSDARG00000045417) ASAP1 (ENSDARG00000039729) eef1a1l3 (ENSDARG00000071727) ENSDARG00000090548 chmp4c (ENSDARG00000007418) zfand1 (ENSDARG00000009178) ENSDARG00000071735 myripb (ENSDARG00000038814) ENSDARG00000094422 acad11 (ENSDARG00000045411) ackr4b (ENSDARG00000040133) Characiphysae ANCESTRAL SPECIES 17 ENSGT00940000156942 ENSGT00940000158089.b ENSGT01080000257487 ENSGT01000000214711 ENSGT01030000235347 ENSGT00940000165265.g.b ENSGT00950000183071.a.a.b.c.d ENSGT01090000260003.a.b.b.a.a.b.a.a ENSGT01090000260003.a.b.b.a.a.b.a.b.b ENSGT00950000183019.f.a.c.b ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a ENSGT00390000015159.b.b ENSGT00940000158547.d ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b ENSGT00940000155594.c.a ENSGT00940000160430 ENSGT00390000004989.a.b ENSGT00940000157026 Characiphysae_b ANCESTRAL SPECIES 51 ENSGT00940000156942 ENSGT00940000158089.b ENSGT01080000257487 ENSGT01000000214711 ENSGT01030000235347 ENSGT00940000165265.g.b ENSGT00950000183071.a.a.b.c.d ENSGT01090000260003.a.b.b.a.a.b.a.a ENSGT01090000260003.a.b.b.a.a.b.a.b.b ENSGT00950000183019.f.a.c.b ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a ENSGT00390000015159.b.b ENSGT00940000158547.d ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b Characoidei ANCESTRAL SPECIES 288 ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a ENSGT00390000015159.b.b ENSGT00940000158547.d ENSGT00940000165754 ENSGT00940000158259.a Mexicana tetra MODERN SPECIES 30 ENSAMXG00000043952 topbp1 (ENSAMXG00000002911) ENSAMXG00000041605 cdv3 (ENSAMXG00000002902) vps41 (ENSAMXG00000002875) #20 POU6F2 (ENSAMXG00000002856) #21 otulina (ENSAMXG00000002842) #22 ENSAMXG00000002822 ankha (ENSAMXG00000002808) myca (ENSAMXG00000038957) fam49bb (ENSAMXG00000002760) eef1a1l3 (ENSAMXG00000002728) ASAP1 (ENSAMXG00000002685) ENSAMXG00000033616 chmp4c (ENSAMXG00000036220) zfand1 (ENSAMXG00000029159) ENSAMXG00000040383 Red-bellied piranha MODERN SPECIES 152 cox4i1l (ENSPNAG00000009610) prkag2a (ENSPNAG00000009660) topbp1 (ENSPNAG00000009700) ENSPNAG00000001330 cdv3 (ENSPNAG00000009739) vps41 (ENSPNAG00000009802) #20 POU6F2 (ENSPNAG00000009828) #21 otulina (ENSPNAG00000009837) #22 ENSPNAG00000009856 ankha (ENSPNAG00000009891) myca (ENSPNAG00000009900) fam49bb (ENSPNAG00000001353) eef1a1l3 (ENSPNAG00000009990) ASAP1 (ENSPNAG00000010153) ENSPNAG00000010181 chmp4c (ENSPNAG00000010219) zfand1 (ENSPNAG00000010254) ENSPNAG00000001389 ENSPNAG00000010394 cbln10 (ENSPNAG00000010416) ENSPNAG00000010428 ENSPNAG00000010490 cbln10 (ENSPNAG00000010525) Channel catfish MODERN SPECIES 15 cul1 (ENSIPUG00000005099) ENSIPUG00000005075 CNTNAP2 (ENSIPUG00000004936) ccl34b.4 (ENSIPUG00000004900) ccl34b.1 (ENSIPUG00000004880) ek1 (ENSIPUG00000004842) hs6st1b (ENSIPUG00000004826) bcl2 (ENSIPUG00000004823) cox4i1l (ENSIPUG00000004802) prkag2a (ENSIPUG00000004673) topbp1 (ENSIPUG00000004602) tmem108 (ENSIPUG00000004577) cdv3 (ENSIPUG00000004558) vps41 (ENSIPUG00000004370) #20 pou6f2 (ENSIPUG00000004301) #21 yae1d1 (ENSIPUG00000004288) #22 ENSIPUG00000004235 ankhb (ENSIPUG00000004183) myca (ENSIPUG00000004157) FAM49B (ENSIPUG00000004088) eef1a1l3 (ENSIPUG00000004067) ENSIPUG00000004056 ENSIPUG00000004039 ENSIPUG00000004012 DNAJC13 (ENSIPUG00000003911) tmx3 (ENSIPUG00000003866) lztfl1 (ENSIPUG00000003801) ENSIPUG00000003784 CCR9 (ENSIPUG00000003778) gli3 (ENSIPUG00000003729) #29 prpf4b (ENSIPUG00000003706) Clupeiformes ANCESTRAL SPECIES 51 ENSGT00940000160059.a.a ENSGT00940000153458.A ENSGT00390000007809.b ENSGT00390000003759 ENSGT00940000159119.b.f.a ENSGT00530000063891.cc ENSGT00940000159935.g.b ENSGT00580000081600.c.a ENSGT01010000222287.B.a.b.a.n.a ENSGT00940000155594.c.b ENSGT00940000157001 ENSGT00390000000626 ENSGT00390000000805 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.a ENSGT00940000155285.b.j.a.a ENSGT00940000155285.b.i ENSGT00390000015159.b.b ENSGT00940000158547.d ENSGT00940000165754 ENSGT00940000158259.a ENSGT00390000009194 ENSGT01050000244890.a.b.b.d ENSGT00940000158945.u.b ENSGT00390000014069.a ENSGT01030000234607.A.a.a.b Atlantic herring MODERN SPECIES 8 dnajb6b (ENSCHAG00000008100) ube3c (ENSCHAG00000007714) rnf32 (ENSCHAG00000007595) lmbr1 (ENSCHAG00000006491) ENSCHAG00000006418 ENSCHAG00000006383 ENSCHAG00000006371 insig1 (ENSCHAG00000006341) htr5ab (ENSCHAG00000006310) puf60b (ENSCHAG00000005982) topbp1 (ENSCHAG00000005054) ENSCHAG00000004998 cdv3 (ENSCHAG00000004983) vps41 (ENSCHAG00000004342) #20 POU6F2 (ENSCHAG00000004172) #21 otulina (ENSCHAG00000004148) #22 ENSCHAG00000004091 ankha (ENSCHAG00000004010) B3GAT1 (ENSCHAG00000003898) myca (ENSCHAG00000003864) ENSCHAG00000003841 fam49bb (ENSCHAG00000003694) eef1a1l3 (ENSCHAG00000003659) ASAP1 (ENSCHAG00000002434) ENSCHAG00000025844 ENSCHAG00000025840 PTCHD3 (ENSCHAG00000025838) ENSCHAG00000025833 ENSCHAG00000025830 ENSCHAG00000025829 ENSCHAG00000025828 Denticle herring MODERN SPECIES 11 nom1 (ENSDCDG00000008013) lmbr1 (ENSDCDG00000007951) rnf32 (ENSDCDG00000007928) shha (ENSDCDG00000007917) ENSDCDG00000007907 ENSDCDG00000007894 en2a (ENSDCDG00000007875) insig1 (ENSDCDG00000007862) htr5ab (ENSDCDG00000007852) puf60b (ENSDCDG00000005495) topbp1 (ENSDCDG00000005062) ENSDCDG00000005027 cdv3 (ENSDCDG00000005023) vps41 (ENSDCDG00000003293) #20 POU6F2 (ENSDCDG00000002873) #21 otulina (ENSDCDG00000002866) #22 ENSDCDG00000002865 ankha (ENSDCDG00000002800) myca (ENSDCDG00000002786) fam49bb (ENSDCDG00000002657) eef1a1l3 (ENSDCDG00000002637) ASAP1 (ENSDCDG00000001919) ENSDCDG00000001839 NFX1 (ENSDCDG00000001611) smarcd3b (ENSDCDG00000001387) CHPF2 (ENSDCDG00000001373) abcf2b (ENSDCDG00000001365) PRKDC (ENSDCDG00000001097) garem (ENSDCDG00000001044) ncf2 (ENSDCDG00000000975) dph2 (ENSDCDG00000000956) Euteleosteomorpha ANCESTRAL SPECIES 31 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709 ENSGT00390000004989.a.b Protacanthopterygii ANCESTRAL SPECIES 49 ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040.v ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00940000155594.c.b ENSGT00940000154025.a ENSGT00940000158533 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 Salmoninae ANCESTRAL SPECIES 87 ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i ENSGT00390000015159.b.a.c ENSGT00940000165526 ENSGT00940000158547.c.c.b ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.b Salmoninae_a ANCESTRAL SPECIES 35 ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n #20 ENSGT00940000156175.h #21 ENSGT00390000011176 #22 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i ENSGT00390000015159.b.a.c ENSGT00940000165526 ENSGT00940000158547.c.c.b ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.b Salmo ANCESTRAL SPECIES 34 ENSGT00940000155458.k ENSGT01030000234607.A.a.a.a.c.a ENSGT00550000074817.u.e ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.a ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.b ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n #20 ENSGT00940000156175.h #21 ENSGT00390000011176 #22 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i ENSGT00390000015159.b.a.c ENSGT00940000165526 ENSGT00940000158547.c.c.b ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.b Atlantic salmon MODERN SPECIES 21 myl12.1 (ENSSSAG00000089518) ENSSSAG00000008864 CHMP5 (ENSSSAG00000008886) ENSSSAG00000118600 ENSSSAG00000098247 ENSSSAG00000043539 RGS20 (ENSSSAG00000008992) lypla1 (ENSSSAG00000009036) mrpl15 (ENSSSAG00000009177) sox32 (ENSSSAG00000009190) sox17 (ENSSSAG00000009196) ENSSSAG00000009212 ENSSSAG00000116205 vps41 (ENSSSAG00000009364) #20 ENSSSAG00000086829 #21 otulina (ENSSSAG00000116071) #22 ENSSSAG00000010052 ankha (ENSSSAG00000010093) myca (ENSSSAG00000085432) FA49B (ENSSSAG00000010145) eef1a1l3 (ENSSSAG00000010223) ASAP1 (ENSSSAG00000010357) ENSSSAG00000019408 SMARCD3 (ENSSSAG00000055452) ENSSSAG00000043047 ABCF2 (ENSSSAG00000043073) ENSSSAG00000043845 slc4a2b (ENSSSAG00000044249) ENSSSAG00000107452 ENSSSAG00000062948 ENSSSAG00000062970 River trout MODERN SPECIES 36 myl12.1 (ENSSTUG00000038805) FASTKD3 (ENSSTUG00000038790) chmp5b (ENSSTUG00000038765) ENSSTUG00000038752 ENSSTUG00000038665 OPRK1 (ENSSTUG00000038647) RGS20 (ENSSTUG00000038630) lypla1 (ENSSTUG00000038578) mrpl15 (ENSSTUG00000038556) sox32 (ENSSTUG00000038552) sox17 (ENSSTUG00000038547) ENSSTUG00000038543 ENSSTUG00000038541 vps41 (ENSSTUG00000035948) #20 POU6F2 (ENSSTUG00000035846) #21 otulina (ENSSTUG00000035835) #22 ankha (ENSSTUG00000035795) ENSSTUG00000035694 fam49bb (ENSSTUG00000035594) eef1a1l3 (ENSSTUG00000035575) ASAP1 (ENSSTUG00000034397) NFX1 (ENSSTUG00000033623) smarcd3b (ENSSTUG00000031852) CHPF2 (ENSSTUG00000031785) ABCF2 (ENSSTUG00000031241) ENSSTUG00000031187 slc4a2b (ENSSTUG00000028981) ENSSTUG00000028898 ENSSTUG00000028887 ENSSTUG00000028872 ENSSTUG00000028861 Oncorhynchus ANCESTRAL SPECIES 27 ENSGT01030000234607.A.a.a.a.c.a ENSGT00550000074817.u.f ENSGT00550000074817.u.e ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.a ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.b ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n #20 ENSGT00940000156175.h #21 ENSGT00390000011176 #22 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i ENSGT00390000015159.b.a.c ENSGT00940000165526 ENSGT00940000158547.c.c.b ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.a.a.a.a Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00940000154982.c.a ENSGT00940000155458.k ENSGT01030000234607.A.a.a.a.c.a ENSGT00550000074817.u.f.b.a ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.b ENSGT00940000157341.h.c ENSGT00940000159123.b.b ENSGT00940000154185.fb ENSGT00390000009040.v.b ENSGT00940000166366.a ENSGT00940000156694.e.b ENSGT00940000154242.b.h.a ENSGT00940000157762.l ENSGT00390000000481.n #20 ENSGT00940000156175.h #21 ENSGT00390000011176 #22 ENSGT00390000009802.b.u ENSGT00390000012189.c.b.a ENSGT00940000155285.b.j.a.b.i ENSGT00390000015159.b.a.c ENSGT00940000165526 ENSGT00940000158547.c.c.b ENSGT00940000156325.o ENSGT00940000158945.s ENSGT01050000244857.B.a.a ENSGT00630000089910.t ENSGT00400000022514.g ENSGT00940000158259.b.g ENSGT00400000024709.k.b ENSGT00400000024709.l ENSGT00390000004989.a.a.a.a.a Coho salmon MODERN SPECIES 2 MYOM1 (ENSOKIG00005045559) myl12.1 (ENSOKIG00005045988) FASTKD3 (ENSOKIG00005045995) chmp5b (ENSOKIG00005046004) ENSOKIG00005046017 OPRK1 (ENSOKIG00005046038) RGS20 (ENSOKIG00005046049) lypla1 (ENSOKIG00005046065) mrpl15 (ENSOKIG00005046196) sox32 (ENSOKIG00005046215) sox17 (ENSOKIG00005046220) ENSOKIG00005046228 ENSOKIG00005046237 vps41 (ENSOKIG00005046386) #20 POU6F2 (ENSOKIG00005047618) #21 otulina (ENSOKIG00005047627) #22 ENSOKIG00005047636 ankha (ENSOKIG00005047671) myca (ENSOKIG00005047871) fam49bb (ENSOKIG00005047901) eef1a1l3 (ENSOKIG00005047969) ASAP1 (ENSOKIG00005048013) NFX1 (ENSOKIG00005048224) smarcd3b (ENSOKIG00005048525) CHPF2 (ENSOKIG00005048981) ABCF2 (ENSOKIG00005048988) ENSOKIG00005049036 slc4a2b (ENSOKIG00005049083) ENSOKIG00005049224 ENSOKIG00005049226 ENSOKIG00005001954 Chinook salmon MODERN SPECIES 21 MYOM1 (ENSOTSG00005022985) myl12.1 (ENSOTSG00005022956) FASTKD3 (ENSOTSG00005022953) chmp5b (ENSOTSG00005022950) ENSOTSG00005022947 OPRK1 (ENSOTSG00005022944) RGS20 (ENSOTSG00005022941) lypla1 (ENSOTSG00005022894) mrpl15 (ENSOTSG00005022893) sox32 (ENSOTSG00005022891) sox17 (ENSOTSG00005022889) ENSOTSG00005022888 ENSOTSG00005022887 vps41 (ENSOTSG00005022690) #20 POU6F2 (ENSOTSG00005022681) #21 otulina (ENSOTSG00005022680) #22 ENSOTSG00005022677 ankha (ENSOTSG00005022245) myca (ENSOTSG00005022243) fam49bb (ENSOTSG00005022060) eef1a1l3 (ENSOTSG00005022020) ASAP1 (ENSOTSG00005017604) NFX1 (ENSOTSG00005015411) smarcd3b (ENSOTSG00005012296) CHPF2 (ENSOTSG00005012247) ABCF2 (ENSOTSG00005012205) ENSOTSG00005012202 slc4a2b (ENSOTSG00005009503) ENSOTSG00005009496 ENSOTSG00005009495 ENSOTSG00005009494 Rainbow trout MODERN SPECIES 6 ENSOMYG00000021110 chmp5b (ENSOMYG00000021092) ENSOMYG00000061164 ENSOMYG00000021059 ENSOMYG00000021031 ENSOMYG00000045503 RGS20 (ENSOMYG00000021011) lypla1 (ENSOMYG00000020976) mrpl15 (ENSOMYG00000020961) sox32 (ENSOMYG00000020957) sox17 (ENSOMYG00000020953) ENSOMYG00000068570 ENSOMYG00000020942 vps41 (ENSOMYG00000020466) #20 ENSOMYG00000020361 #21 otulina (ENSOMYG00000020350) #22 ENSOMYG00000020330 ankha (ENSOMYG00000020300) myc (ENSOMYG00000020276) ENSOMYG00000075171 fam49bb (ENSOMYG00000020029) eef1a1l3 (ENSOMYG00000019971) ASAP1 (ENSOMYG00000019682) ENSOMYG00000018575 SMARCD3 (ENSOMYG00000018283) ENSOMYG00000018258 ABCF2 (ENSOMYG00000018102) ENSOMYG00000018068 slc4a2b (ENSOMYG00000014427) ENSOMYG00000014135 ENSOMYG00000014126 Huchen MODERN SPECIES 1188 ENSHHUG00000021509 #21 ENSHHUG00000021511 #21 otulina (ENSHHUG00000021519) #22 ENSHHUG00000021526 ankha (ENSHHUG00000021538) myca (ENSHHUG00000021595) ENSHHUG00000021606 Northern pike MODERN SPECIES 20 ENSELUG00000008282 myl12.1 (ENSELUG00000008263) FASTKD3 (ENSELUG00000008158) chmp5 (ENSELUG00000008132) ENSELUG00000008063 OPRK1 (ENSELUG00000008032) RGS20 (ENSELUG00000027608) lypla1 (ENSELUG00000007987) mrpl15 (ENSELUG00000007952) sox32 (ENSELUG00000007938) sox17 (ENSELUG00000001475) ENSELUG00000007911 ENSELUG00000007893 vps41 (ENSELUG00000007800) #20 POU6F2 (ENSELUG00000007640) #21 otulina (ENSELUG00000007612) #22 ENSELUG00000031249 ENSELUG00000007600 ankha (ENSELUG00000007584) myca (ENSELUG00000007557) fam49bb (ENSELUG00000007535) eef1a1l3 (ENSELUG00000007495) ASAP1 (ENSELUG00000007471) NFX1 (ENSELUG00000007422) smarcd3b (ENSELUG00000007382) CHPF2 (ENSELUG00000007288) ABCF2 (ENSELUG00000007264) ENSELUG00000007220 ENSELUG00000030812 slc4a2b (ENSELUG00000007056) ENSELUG00000006652 Acanthomorphata ANCESTRAL SPECIES 17 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Percomorphaceae ANCESTRAL SPECIES 28 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i Ovalentaria ANCESTRAL SPECIES 21 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i Oryzias ANCESTRAL SPECIES 18 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00940000160430 Oryzias_b ANCESTRAL SPECIES 16 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT01000000221249 Indian medaka MODERN SPECIES 14 LPIN2 (ENSOMEG00000002192) MYOM1 (ENSOMEG00000002167) ENSOMEG00000002128 chmp5b (ENSOMEG00000002103) FASTKD3 (ENSOMEG00000002114) OPRK1 (ENSOMEG00000002087) RGS20 (ENSOMEG00000002080) lypla1 (ENSOMEG00000002069) mrpl15 (ENSOMEG00000002056) sox32 (ENSOMEG00000002046) sox17 (ENSOMEG00000002030) ENSOMEG00000002024 ENSOMEG00000002012 vps41 (ENSOMEG00000001986) #20 POU6F2 (ENSOMEG00000001949) #21 otulina (ENSOMEG00000000019) #22 ENSOMEG00000000018 ankha (ENSOMEG00000001910) myca (ENSOMEG00000001897) ENSOMEG00000001890 fam49bb (ENSOMEG00000001881) eef1a1l3 (ENSOMEG00000001868) ASAP1 (ENSOMEG00000001852) ENSOMEG00000001829 ENSOMEG00000001822 NFX1 (ENSOMEG00000001814) ENSOMEG00000001796 smarcd3b (ENSOMEG00000001784) CHPF2 (ENSOMEG00000001763) abcf2a (ENSOMEG00000001752) ENSOMEG00000001734 Javanese ricefish MODERN SPECIES 12 ADCYAP1 (ENSOJAG00000013308) METTL4 (ENSOJAG00000013276) EMILIN2 (ENSOJAG00000013041) MYL12B (ENSOJAG00000012155) FASTKD3 (ENSOJAG00000012148) chmp5b (ENSOJAG00000012117) ENSOJAG00000012093 RGS20 (ENSOJAG00000012088) lypla1 (ENSOJAG00000012074) mrpl15 (ENSOJAG00000012044) sox32 (ENSOJAG00000012009) sox17 (ENSOJAG00000011994) ENSOJAG00000011966 vps41 (ENSOJAG00000011510) #20 POU6F2 (ENSOJAG00000011465) #21 otulina (ENSOJAG00000011461) #22 ENSOJAG00000011452 ankha (ENSOJAG00000011407) myca (ENSOJAG00000011322) ENSOJAG00000011295 fam49bb (ENSOJAG00000011101) eef1a1l3 (ENSOJAG00000011062) ASAP1 (ENSOJAG00000010440) NFX1 (ENSOJAG00000010141) smarcd3b (ENSOJAG00000009827) CHPF2 (ENSOJAG00000009760) abcf2a (ENSOJAG00000009751) ENSOJAG00000009694 ENSOJAG00000007873 ENSOJAG00000007863 ENSOJAG00000007822 Oryzias_a ANCESTRAL SPECIES 16 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT00550000074817.u ENSGT01030000234607.A.a.a.a.c ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00940000160430 Japanese Medaka HdrR MODERN SPECIES 12 MYOM1 (ENSORLG00000011397) ENSORLG00000011406 chmp5b (ENSORLG00000029884) FASTKD3 (ENSORLG00000011410) ENSORLG00000024140 lypla1 (ENSORLG00000011504) RGS20 (ENSORLG00000011462) mrpl15 (ENSORLG00000011523) sox32 (ENSORLG00000011529) sox17 (ENSORLG00000011542) ENSORLG00000022333 ENSORLG00000030502 vps41 (ENSORLG00000011643) #20 POU6F2 (ENSORLG00000011666) #21 ENSORLG00000011672 otulina (ENSORLG00000024228) #22 ENSORLG00000011689 ankha (ENSORLG00000011729) myca (ENSORLG00000025592) fam49bb (ENSORLG00000026369) si:dkey-37o8.1 (ENSORLG00000019066) ASAP1 (ENSORLG00000029861) ENSORLG00000027942 NFX1 (ENSORLG00000026662) smarcd3b (ENSORLG00000011768) CHPF2 (ENSORLG00000011783) abcf2a (ENSORLG00000011822) ENSORLG00000027505 slc4a2b (ENSORLG00000012164) ENSORLG00000029077 ENSORLG00000012186 Chinese medaka MODERN SPECIES 71 EMILIN2 (ENSOSIG00000014541) LPIN2 (ENSOSIG00000014566) MYOM1 (ENSOSIG00000014774) ENSOSIG00000015113 FASTKD3 (ENSOSIG00000015115) OPRK1 (ENSOSIG00000015116) lypla1 (ENSOSIG00000015121) RGS20 (ENSOSIG00000015124) mrpl15 (ENSOSIG00000015126) sox32 (ENSOSIG00000015127) sox17 (ENSOSIG00000015131) ENSOSIG00000015132 ENSOSIG00000015134 ENSOSIG00000015142 POU6F2 (ENSOSIG00000016038) #21 otulina (ENSOSIG00000016039) #22 OTULIN (ENSOSIG00000016040) ankha (ENSOSIG00000016043) myca (ENSOSIG00000016076) fam49bb (ENSOSIG00000016086) ASAP1 (ENSOSIG00000016540) NFX1 (ENSOSIG00000020368) smarcd3b (ENSOSIG00000020499) CHPF2 (ENSOSIG00000020619) slc4a2b (ENSOSIG00000020668) ENSOSIG00000021264 ENSOSIG00000021265 ENSOSIG00000021266 nrbp2b (ENSOSIG00000021289) ENSOSIG00000021677 ENSOSIG00000021936 Cyprinodontiformes ANCESTRAL SPECIES 20 ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i Cyprinodontoidei ANCESTRAL SPECIES 27 ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i Poeciliinae ANCESTRAL SPECIES 20 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a.d ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Poecilia ANCESTRAL SPECIES 17 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a.d ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j NAME_6 ANCESTRAL SPECIES 169 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a.d ENSGT00630000089910 ENSGT00400000022514 ENSGT00980000199639 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Sailfin molly MODERN SPECIES 127 LPIN2 (ENSPLAG00000011751) MYOM1 (ENSPLAG00000011827) ENSPLAG00000011837 FASTKD3 (ENSPLAG00000011844) chmp5b (ENSPLAG00000011864) ENSPLAG00000011873 ENSPLAG00000011883 lypla1 (ENSPLAG00000011923) mrpl15 (ENSPLAG00000011935) sox32 (ENSPLAG00000011957) sox17 (ENSPLAG00000011966) ENSPLAG00000011975 ENSPLAG00000011985 vps41 (ENSPLAG00000012077) #20 POU6F2 (ENSPLAG00000012106) #21 otulina (ENSPLAG00000012121) #22 ENSPLAG00000012126 ankha (ENSPLAG00000012155) myca (ENSPLAG00000012165) Amazon molly MODERN SPECIES 486 LPIN2 (ENSPFOG00000023284) MYOM1 (ENSPFOG00000014111) ENSPFOG00000014089 FASTKD3 (ENSPFOG00000014081) chmp5b (ENSPFOG00000014053) OPRK1 (ENSPFOG00000014033) RGS20 (ENSPFOG00000013996) lypla1 (ENSPFOG00000013928) mrpl15 (ENSPFOG00000013894) sox32 (ENSPFOG00000013880) sox17 (ENSPFOG00000013867) ENSPFOG00000013859 ENSPFOG00000013839 vps41 (ENSPFOG00000013663) #20 POU6F2 (ENSPFOG00000013600) #21 otulina (ENSPFOG00000013581) #22 OTULIN (ENSPFOG00000013533) ankha (ENSPFOG00000013437) myca (ENSPFOG00000013425) myca (ENSPFOG00000013399) fam49bb (ENSPFOG00000013240) eef1a1l3 (ENSPFOG00000013173) ASAP1 (ENSPFOG00000012683) NFX1 (ENSPFOG00000012547) smarcd3b (ENSPFOG00000012463) CHPF2 (ENSPFOG00000012439) abcf2a (ENSPFOG00000012277) ENSPFOG00000012241 ENSPFOG00000022070 slc4a2b (ENSPFOG00000012046) ENSPFOG00000012039 Guppy MODERN SPECIES 451 EMILIN2 (ENSPREG00000007309) LPIN2 (ENSPREG00000007247) MYOM1 (ENSPREG00000006914) ENSPREG00000006845 FASTKD3 (ENSPREG00000006765) chmp5b (ENSPREG00000006727) ENSPREG00000006708 RGS20 (ENSPREG00000006695) lypla1 (ENSPREG00000006672) mrpl15 (ENSPREG00000006654) sox32 (ENSPREG00000006621) ENSPREG00000006602 ENSPREG00000006579 vps41 (ENSPREG00000006515) #20 POU6F2 (ENSPREG00000006479) #21 otulina (ENSPREG00000006464) #22 OTULIN (ENSPREG00000006444) ankha (ENSPREG00000006429) ENSPREG00000006407 myca (ENSPREG00000006368) fam49bb (ENSPREG00000006320) eef1a1l3 (ENSPREG00000006280) ASAP1 (ENSPREG00000006220) NFX1 (ENSPREG00000006186) smarcd3b (ENSPREG00000006165) CHPF2 (ENSPREG00000006154) abcf2a (ENSPREG00000006098) ENSPREG00000006028 slc4a2b (ENSPREG00000005968) ENSPREG00000005941 ENSPREG00000005904 Platyfish MODERN SPECIES 13 LPIN2 (ENSXMAG00000002157) MYOM1 (ENSXMAG00000002124) ENSXMAG00000002121 FASTKD3 (ENSXMAG00000002108) chmp5b (ENSXMAG00000002110) OPRK1 (ENSXMAG00000027112) RGS20 (ENSXMAG00000002100) lypla1 (ENSXMAG00000002093) mrpl15 (ENSXMAG00000002087) sox32 (ENSXMAG00000002086) sox17 (ENSXMAG00000002084) ENSXMAG00000026548 ENSXMAG00000020052 vps41 (ENSXMAG00000002050) #20 POU6F2 (ENSXMAG00000024135) #21 otulina (ENSXMAG00000021215) #22 ENSXMAG00000002031 ankha (ENSXMAG00000002027) myca (ENSXMAG00000002025) fam49bb (ENSXMAG00000026161) eef1a1l3 (ENSXMAG00000001998) ASAP1 (ENSXMAG00000001975) NFX1 (ENSXMAG00000001963) smarcd3b (ENSXMAG00000022630) CHPF2 (ENSXMAG00000001943) abcf2a (ENSXMAG00000001927) ENSXMAG00000001926 slc4a2b (ENSXMAG00000001894) ENSXMAG00000001890 ENSXMAG00000015202 ENSXMAG00000001889 NAME_4 ANCESTRAL SPECIES 38 ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Mummichog MODERN SPECIES 528 ENSFHEG00000011894 MYOM1 (ENSFHEG00000011880) ENSFHEG00000011787 FASTKD3 (ENSFHEG00000011778) chmp5b (ENSFHEG00000011771) ENSFHEG00000011736 RGS20 (ENSFHEG00000011720) lypla1 (ENSFHEG00000011700) mrpl15 (ENSFHEG00000011673) sox32 (ENSFHEG00000011659) sox17 (ENSFHEG00000011615) ENSFHEG00000011613 ENSFHEG00000011593 vps41 (ENSFHEG00000011570) #20 POU6F2 (ENSFHEG00000011516) #21 otulina (ENSFHEG00000011475) #22 ankha (ENSFHEG00000011444) myca (ENSFHEG00000011396) Sheepshead minnow MODERN SPECIES 235 LPIN2 (ENSCVAG00000009298) MYOM1 (ENSCVAG00000009377) myl12.1 (ENSCVAG00000009384) FASTKD3 (ENSCVAG00000009391) chmp5b (ENSCVAG00000009424) OPRK1 (ENSCVAG00000009440) ENSCVAG00000009454 lypla1 (ENSCVAG00000009504) mrpl15 (ENSCVAG00000009515) sox32 (ENSCVAG00000009537) sox17 (ENSCVAG00000009541) ENSCVAG00000009546 ENSCVAG00000009558 vps41 (ENSCVAG00000009630) #20 POU6F2 (ENSCVAG00000009675) #21 otulina (ENSCVAG00000009707) #22 ENSCVAG00000009719 ankha (ENSCVAG00000009767) myca (ENSCVAG00000009784) fam49bb (ENSCVAG00000009820) eef1a1l3 (ENSCVAG00000009828) ASAP1 (ENSCVAG00000010016) NFX1 (ENSCVAG00000010039) smarcd3b (ENSCVAG00000010125) CHPF2 (ENSCVAG00000010130) abcf2a (ENSCVAG00000010164) ENSCVAG00000010217 Aplocheiloidei ANCESTRAL SPECIES 18 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Turquoise killifish MODERN SPECIES 1617 MYL12.2 (ENSNFUG00015006405) FASTKD3 (ENSNFUG00015006421) CHMP5B (ENSNFUG00015006435) OPRK1 (ENSNFUG00015006448) RGS20 (ENSNFUG00015006452) lypla1 (ENSNFUG00015006459) sox32 (ENSNFUG00015006467) SOX17 (ENSNFUG00015006469) ENSNFUG00015006471 ENSNFUG00015006473 ENSNFUG00015006481 VPS41 (ENSNFUG00015006492) #20 ENSNFUG00015006516 ENSNFUG00015006521 POU6F2 (ENSNFUG00015006526) #21 otulina (ENSNFUG00015006533) #22 FAM105BA (ENSNFUG00015006535) ankha (ENSNFUG00015006543) myca (ENSNFUG00015006602) eef1a1l3 (ENSNFUG00015006608) fam49bb (ENSNFUG00015006616) ASAP1 (ENSNFUG00015006679) NFX1 (ENSNFUG00015007270) smarcd3b (ENSNFUG00015007631) CHPF2 (ENSNFUG00015007700) abcf2a (ENSNFUG00015007711) CU694221.1 (ENSNFUG00015007762) ENSNFUG00015007768 SLC4A2B (ENSNFUG00015007822) ENSNFUG00015008423 OLA.2605 (ENSNFUG00015008426) Mangrove rivulus MODERN SPECIES 7 LPIN2 (ENSKMAG00000014888) MYOM1 (ENSKMAG00000014989) myl12.1 (ENSKMAG00000015085) FASTKD3 (ENSKMAG00000015153) chmp5b (ENSKMAG00000015178) OPRK1 (ENSKMAG00000015223) RGS20 (ENSKMAG00000015246) lypla1 (ENSKMAG00000015266) mrpl15 (ENSKMAG00000015306) sox32 (ENSKMAG00000015350) sox17 (ENSKMAG00000015407) ENSKMAG00000015419 ENSKMAG00000015441 vps41 (ENSKMAG00000015509) #20 POU6F2 (ENSKMAG00000015680) #21 otulina (ENSKMAG00000015748) #22 ENSKMAG00000015762 ankha (ENSKMAG00000015802) myca (ENSKMAG00000015852) fam49bb (ENSKMAG00000015874) eef1a1l3 (ENSKMAG00000015910) ASAP1 (ENSKMAG00000016018) NFX1 (ENSKMAG00000016306) smarcd3b (ENSKMAG00000016357) CHPF2 (ENSKMAG00000016424) abcf2a (ENSKMAG00000016453) ENSKMAG00000016498 slc4a2b (ENSKMAG00000016571) ENSKMAG00000016662 ENSKMAG00000016670 ENSKMAG00000016686 Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Cichlidae ANCESTRAL SPECIES 18 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Pseudocrenilabrinae ANCESTRAL SPECIES 20 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 19 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j.a.b Haplochromini ANCESTRAL SPECIES 21 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j.a.b Burton s mouthbrooder MODERN SPECIES 319 LPIN2 (ENSHBUG00000016222) MYOM1 (ENSHBUG00000016165) MYL12B (ENSHBUG00000016121) FASTKD3 (ENSHBUG00000016113) chmp5b (ENSHBUG00000016103) OPRK1 (ENSHBUG00000016074) RGS20 (ENSHBUG00000016063) lypla1 (ENSHBUG00000016035) mrpl15 (ENSHBUG00000015988) sox32 (ENSHBUG00000015975) sox17 (ENSHBUG00000015949) ENSHBUG00000015946 ENSHBUG00000015937 vps41 (ENSHBUG00000015897) #20 POU6F2 (ENSHBUG00000015845) #21 otulina (ENSHBUG00000015779) #22 ENSHBUG00000015748 ankha (ENSHBUG00000015711) myca (ENSHBUG00000015689) fam49bb (ENSHBUG00000015548) eef1a1l3 (ENSHBUG00000015515) ASAP1 (ENSHBUG00000015490) ENSHBUG00000015410 NFX1 (ENSHBUG00000015403) smarcd3b (ENSHBUG00000015370) CHPF2 (ENSHBUG00000015335) abcf2a (ENSHBUG00000015296) ENSHBUG00000015252 slc4a2b (ENSHBUG00000015231) ENSHBUG00000015172 ENSHBUG00000015169 Haplochromini_A ANCESTRAL SPECIES 21 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000182574 ENSGT00400000024709.i P. nyererei MODERN SPECIES 382 LPIN2 (ENSPNYG00000001433) MYOM1 (ENSPNYG00000001499) MYL12B (ENSPNYG00000001547) FASTKD3 (ENSPNYG00000001552) chmp5b (ENSPNYG00000001561) ENSPNYG00000001599 RGS20 (ENSPNYG00000001656) lypla1 (ENSPNYG00000001679) mrpl15 (ENSPNYG00000001724) sox32 (ENSPNYG00000001745) sox17 (ENSPNYG00000001755) ENSPNYG00000001764 ENSPNYG00000001796 vps41 (ENSPNYG00000001817) #20 POU6F2 (ENSPNYG00000001884) #21 otulina (ENSPNYG00000001920) #22 ENSPNYG00000001962 ankha (ENSPNYG00000001985) myca (ENSPNYG00000001998) fam49bb (ENSPNYG00000002014) eef1a1l3 (ENSPNYG00000002059) ASAP1 (ENSPNYG00000002090) ENSPNYG00000002170 NFX1 (ENSPNYG00000002175) smarcd3b (ENSPNYG00000002187) CHPF2 (ENSPNYG00000002249) abcf2a (ENSPNYG00000002263) ENSPNYG00000002314 slc4a2b (ENSPNYG00000002382) ENSPNYG00000002404 ENSPNYG00000002424 Haplochromini_B ANCESTRAL SPECIES 18 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00940000182574 ENSGT00400000024709.i ENSGT00400000024709.j.a.b Zebra mbuna MODERN SPECIES 1112 LPIN2 (ENSMZEG00005001676) MYOM1 (ENSMZEG00005001720) MYL12B (ENSMZEG00005001784) FASTKD3 (ENSMZEG00005001794) chmp5b (ENSMZEG00005001802) OPRK1 (ENSMZEG00005001899) RGS20 (ENSMZEG00005018231) lypla1 (ENSMZEG00005018237) mrpl15 (ENSMZEG00005018245) sox32 (ENSMZEG00005018250) sox17 (ENSMZEG00005018255) ENSMZEG00005018258 ENSMZEG00005018265 vps41 (ENSMZEG00005018272) #20 POU6F2 (ENSMZEG00005018293) #21 otulina (ENSMZEG00005018299) #22 ENSMZEG00005018310 ankha (ENSMZEG00005018326) myca (ENSMZEG00005018336) fam49bb (ENSMZEG00005018345) eef1a1l3 (ENSMZEG00005018358) ASAP1 (ENSMZEG00005018371) NFX1 (ENSMZEG00005018390) smarcd3b (ENSMZEG00005018398) CHPF2 (ENSMZEG00005018413) abcf2a (ENSMZEG00005018416) ENSMZEG00005018426 slc4a2b (ENSMZEG00005018443) ENSMZEG00005018472 ENSMZEG00005018479 ENSMZEG00005018485 Lyretail cichlid MODERN SPECIES 325 LPIN2 (ENSNBRG00000014589) MYOM1 (ENSNBRG00000014495) MYL12B (ENSNBRG00000014482) FASTKD3 (ENSNBRG00000014435) chmp5b (ENSNBRG00000014449) OPRK1 (ENSNBRG00000014072) RGS20 (ENSNBRG00000013954) lypla1 (ENSNBRG00000013920) mrpl15 (ENSNBRG00000013893) sox32 (ENSNBRG00000013876) sox17 (ENSNBRG00000013870) ENSNBRG00000013854 ENSNBRG00000013843 vps41 (ENSNBRG00000013747) #20 POU6F2 (ENSNBRG00000013723) #21 otulina (ENSNBRG00000013688) #22 ENSNBRG00000013623 ankha (ENSNBRG00000013594) ENSNBRG00000013587 fam49bb (ENSNBRG00000013562) eef1a1l3 (ENSNBRG00000013552) ASAP1 (ENSNBRG00000013502) ENSNBRG00000013495 NFX1 (ENSNBRG00000013449) smarcd3b (ENSNBRG00000013417) CHPF2 (ENSNBRG00000013389) abcf2a (ENSNBRG00000013377) ENSNBRG00000013346 slc4a2b (ENSNBRG00000013268) ENSNBRG00000013262 ENSNBRG00000013255 Nile tilapia MODERN SPECIES 21 MYOM1 (ENSONIG00000006105) ENSONIG00000029189 FASTKD3 (ENSONIG00000006120) chmp5b (ENSONIG00000006122) OPRK1 (ENSONIG00000006128) RGS20 (ENSONIG00000038958) lypla1 (ENSONIG00000006132) mrpl15 (ENSONIG00000006134) sox32 (ENSONIG00000006139) sox17 (ENSONIG00000006141) ENSONIG00000006142 ENSONIG00000027347 ENSONIG00000006143 vps41 (ENSONIG00000006145) #20 POU6F2 (ENSONIG00000006150) #21 otulina (ENSONIG00000006153) #22 ENSONIG00000006156 ankha (ENSONIG00000006157) myca (ENSONIG00000006161) fam49bb (ENSONIG00000006163) eef1a1l3 (ENSONIG00000042124) ASAP1 (ENSONIG00000006169) NFX1 (ENSONIG00000006192) smarcd3b (ENSONIG00000006195) CHPF2 (ENSONIG00000006202) abcf2a (ENSONIG00000006206) ENSONIG00000034346 slc4a2b (ENSONIG00000006209) ENSONIG00000006235 ENSONIG00000028755 ENSONIG00000042395 Pomacentridae ANCESTRAL SPECIES 11 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Pomacentridae_A ANCESTRAL SPECIES 8 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000177207 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Amphiprion ANCESTRAL SPECIES 7 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000177207 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Clown anemonefish MODERN SPECIES 1034 nrbp2b (ENSAOCG00000013301) ENSAOCG00000013320 vps41 (ENSAOCG00000000842) #20 POU6F2 (ENSAOCG00000013500) #21 otulina (ENSAOCG00000013507) #22 ENSAOCG00000013528 ankha (ENSAOCG00000013571) myca (ENSAOCG00000013584) Orange clownfish MODERN SPECIES 14 MYOM1 (ENSAPEG00000013722) ENSAPEG00000013649 FASTKD3 (ENSAPEG00000013632) chmp5b (ENSAPEG00000013601) OPRK1 (ENSAPEG00000013233) RGS20 (ENSAPEG00000013180) lypla1 (ENSAPEG00000013123) mrpl15 (ENSAPEG00000013090) sox32 (ENSAPEG00000013081) ENSAPEG00000013076 sox17 (ENSAPEG00000013070) ENSAPEG00000013051 ENSAPEG00000013040 vps41 (ENSAPEG00000012869) #20 POU6F2 (ENSAPEG00000012836) #21 otulina (ENSAPEG00000012827) #22 ENSAPEG00000012819 ankha (ENSAPEG00000012783) myca (ENSAPEG00000012769) fam49bb (ENSAPEG00000012710) eef1a1l3 (ENSAPEG00000012670) ASAP1 (ENSAPEG00000012491) NFX1 (ENSAPEG00000012401) smarcd3b (ENSAPEG00000012305) CHPF2 (ENSAPEG00000012271) abcf2a (ENSAPEG00000012199) ENSAPEG00000012112 slc4a2b (ENSAPEG00000012059) ENSAPEG00000012045 ENSAPEG00000012038 ENSAPEG00000012005 Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 4297 otulina (ENSAPOG00000013804) #22 Spiny chromis MODERN SPECIES 251 otulina (ENSAPOG00000016279) #22 ENSAPOG00000016293 ankha (ENSAPOG00000016355) myca (ENSAPOG00000016366) fam49bb (ENSAPOG00000016390) ENSAPOG00000016407 eef1a1l3 (ENSAPOG00000016459) ASAP1 (ENSAPOG00000016620) NFX1 (ENSAPOG00000016671) smarcd3b (ENSAPOG00000016729) CHPF2 (ENSAPOG00000016756) abcf2a (ENSAPOG00000016835) ENSAPOG00000016920 slc4a2b (ENSAPOG00000017003) ENSAPOG00000017011 ENSAPOG00000017025 Bicolor damselfish MODERN SPECIES 930 FASTKD3 (ENSSPAG00000004403) chmp5b (ENSSPAG00000004385) OPRK1 (ENSSPAG00000004373) RGS20 (ENSSPAG00000004353) lypla1 (ENSSPAG00000004315) mrpl15 (ENSSPAG00000004300) sox32 (ENSSPAG00000004285) sox17 (ENSSPAG00000004274) ENSSPAG00000004260 ENSSPAG00000004240 vps41 (ENSSPAG00000004169) #20 POU6F2 (ENSSPAG00000004115) #21 otulina (ENSSPAG00000004101) #22 ENSSPAG00000004066 ENSSPAG00000004043 ankha (ENSSPAG00000004005) Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Eupercaria ANCESTRAL SPECIES 20 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Tetraodontidae ANCESTRAL SPECIES 18 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b.b Fugu MODERN SPECIES 1 EMILIN2 (ENSTRUG00000003983) LPIN2 (ENSTRUG00000004278) ENSTRUG00000011112 FASTKD3 (ENSTRUG00000006808) OPRK1 (ENSTRUG00000007104) ENSTRUG00000007273 lypla1 (ENSTRUG00000007339) mrpl15 (ENSTRUG00000007522) sox32 (ENSTRUG00000007604) sox17 (ENSTRUG00000007618) ENSTRUG00000032813 ENSTRUG00000022738 ENSTRUG00000007762 vps41 (ENSTRUG00000007800) #20 POU6F2 (ENSTRUG00000008239) #21 otulina (ENSTRUG00000008377) #22 ENSTRUG00000008441 ankha (ENSTRUG00000008542) myc (ENSTRUG00000008797) eef1a1l3 (ENSTRUG00000009006) ASAP1 (ENSTRUG00000009127) NFX1 (ENSTRUG00000009872) CHPF2 (ENSTRUG00000010232) abcf2a (ENSTRUG00000010308) ENSTRUG00000023734 ENSTRUG00000021158 ENSTRUG00000025521 ENSTRUG00000021475 ENSTRUG00000024352 ENSTRUG00000024686 ENSTRUG00000032484 Eupecaria_A ANCESTRAL SPECIES 19 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Ballan wrasse MODERN SPECIES 514 POU6F2 (ENSLBEG00000021568) #21 otulina (ENSLBEG00000021553) #22 ENSLBEG00000021536 ankha (ENSLBEG00000021437) myca (ENSLBEG00000021421) fam49bb (ENSLBEG00000021375) eef1a1l3 (ENSLBEG00000021334) ASAP1 (ENSLBEG00000021158) Eupecaria_B ANCESTRAL SPECIES 19 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Eupecaria_C ANCESTRAL SPECIES 19 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b European seabass MODERN SPECIES 8 LPIN2 (ENSDLAG00005020298) MYOM1 (ENSDLAG00005020579) myl12.1 (ENSDLAG00005021974) ENSDLAG00005021782 CHMP5 (ENSDLAG00005026401) ENSDLAG00005027177 RGS20 (ENSDLAG00005021819) LYPLA1 (ENSDLAG00005021821) mrpl15 (ENSDLAG00005021825) sox32 (ENSDLAG00005021835) Sox17 (ENSDLAG00005021840) ENSDLAG00005033061 ENSDLAG00005034380 vps41 (ENSDLAG00005027328) #20 ENSDLAG00005022491 #21 otulina (ENSDLAG00005026394) #22 ENSDLAG00005022508 ANKH (ENSDLAG00005022519) ENSDLAG00005030484 myca (ENSDLAG00005022642) fam49bb (ENSDLAG00005004275) 42SP50 (ENSDLAG00005004878) ASAP1 (ENSDLAG00005005012) ENSDLAG00005008350 SMARCD3 (ENSDLAG00005008660) ENSDLAG00005030890 ABCF2 (ENSDLAG00005009120) ENSDLAG00005009346 slc4a2b (ENSDLAG00005009418) ENSDLAG00005032892 ENSDLAG00005033004 Large yellow croaker MODERN SPECIES 494 MYOM1 (ENSLCRG00005021839) ENSLCRG00005021833 FASTKD3 (ENSLCRG00005021832) chmp5b (ENSLCRG00005021831) OPRK1 (ENSLCRG00005021829) RGS20 (ENSLCRG00005021827) lypla1 (ENSLCRG00005021825) mrpl15 (ENSLCRG00005021824) sox32 (ENSLCRG00005021823) sox17 (ENSLCRG00005021821) ENSLCRG00005021820 ENSLCRG00005021819 vps41 (ENSLCRG00005021128) #20 POU6F2 (ENSLCRG00005021122) #21 ENSLCRG00005021120 otulina (ENSLCRG00005021119) #22 ENSLCRG00005021118 ankha (ENSLCRG00005021116) myc (ENSLCRG00005021115) fam49bb (ENSLCRG00005020950) eef1a1l3 (ENSLCRG00005020945) ASAP1 (ENSLCRG00005020349) NFX1 (ENSLCRG00005020336) smarcd3b (ENSLCRG00005020325) CHPF2 (ENSLCRG00005020323) abcf2a (ENSLCRG00005020309) ENSLCRG00005020304 slc4a2b (ENSLCRG00005017301) ENSLCRG00005017252 ENSLCRG00005017249 ENSLCRG00005017248 Gilthead seabream MODERN SPECIES 10 LPIN2 (ENSSAUG00010007842) MYOM1 (ENSSAUG00010002943) myl12.1 (ENSSAUG00010002678) FASTKD3 (ENSSAUG00010002671) chmp5b (ENSSAUG00010002659) OPRK1 (ENSSAUG00010002649) ENSSAUG00010002637 lypla1 (ENSSAUG00010002627) mrpl15 (ENSSAUG00010002618) sox32 (ENSSAUG00010002613) sox17 (ENSSAUG00010025902) ENSSAUG00010025900 ENSSAUG00010025898 vps41 (ENSSAUG00010025600) #20 POU6F2 (ENSSAUG00010025588) #21 otulina (ENSSAUG00010025586) #22 ENSSAUG00010025585 ankha (ENSSAUG00010025442) myca (ENSSAUG00010025436) fam49bb (ENSSAUG00010025420) eef1a1l3 (ENSSAUG00010025416) ASAP1 (ENSSAUG00010025209) NFX1 (ENSSAUG00010025069) smarcd3b (ENSSAUG00010025032) CHPF2 (ENSSAUG00010025025) abcf2a (ENSSAUG00010024908) ENSSAUG00010024905 slc4a2b (ENSSAUG00010023272) ENSSAUG00010023243 ENSSAUG00010023242 ENSSAUG00010023241 Perciformes ANCESTRAL SPECIES 21 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Perciformes_a ANCESTRAL SPECIES 22 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Channel bull blenny MODERN SPECIES 12 LPIN2 (ENSCGOG00000014886) MYOM1 (ENSCGOG00000016666) myl12.1 (ENSCGOG00000017811) FASTKD3 (ENSCGOG00000017819) chmp5b (ENSCGOG00000017831) OPRK1 (ENSCGOG00000017923) RGS20 (ENSCGOG00000017925) lypla1 (ENSCGOG00000017926) mrpl15 (ENSCGOG00000017943) sox32 (ENSCGOG00000017944) sox17 (ENSCGOG00000017946) ENSCGOG00000017949 ENSCGOG00000017953 vps41 (ENSCGOG00000017994) #20 POU6F2 (ENSCGOG00000018748) #21 otulina (ENSCGOG00000018764) #22 ENSCGOG00000018766 ankha (ENSCGOG00000018772) myca (ENSCGOG00000018778) fam49bb (ENSCGOG00000018802) eef1a1l3 (ENSCGOG00000019712) ASAP1 (ENSCGOG00000019982) NFX1 (ENSCGOG00000021523) smarcd3b (ENSCGOG00000021683) CHPF2 (ENSCGOG00000021797) abcf2a (ENSCGOG00000021806) ENSCGOG00000022001 slc4a2b (ENSCGOG00000022017) ENSCGOG00000022177 ENSCGOG00000022178 ENSCGOG00000022180 Pike perch MODERN SPECIES 94 LPIN2 (ENSSLUG00000021324) MYOM1 (ENSSLUG00000020557) ENSSLUG00000020395 FASTKD3 (ENSSLUG00000020391) chmp5b (ENSSLUG00000020380) OPRK1 (ENSSLUG00000020365) RGS20 (ENSSLUG00000020354) lypla1 (ENSSLUG00000020344) mrpl15 (ENSSLUG00000020332) sox32 (ENSSLUG00000020322) sox17 (ENSSLUG00000020318) ENSSLUG00000020306 ENSSLUG00000020296 vps41 (ENSSLUG00000018137) #20 POU6F2 (ENSSLUG00000017996) #21 otulina (ENSSLUG00000017991) #22 ENSSLUG00000017986 ankha (ENSSLUG00000017973) myca (ENSSLUG00000017958) fam49bb (ENSSLUG00000017424) eef1a1l3 (ENSSLUG00000017352) ASAP1 (ENSSLUG00000013531) NFX1 (ENSSLUG00000013237) smarcd3b (ENSSLUG00000013142) CHPF2 (ENSSLUG00000013109) abcf2a (ENSSLUG00000012962) ENSSLUG00000012897 slc4a2b (ENSSLUG00000009083) ENSSLUG00000008888 ENSSLUG00000008884 ENSSLUG00000008874 Cottioidei ANCESTRAL SPECIES 21 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Lumpfish MODERN SPECIES 12 LPIN2 (ENSCLMG00005019319) MYOM1 (ENSCLMG00005019225) myl12.1 (ENSCLMG00005019219) FASTKD3 (ENSCLMG00005019217) chmp5b (ENSCLMG00005019196) OPRK1 (ENSCLMG00005019194) ENSCLMG00005019191 lypla1 (ENSCLMG00005019189) mrpl15 (ENSCLMG00005019186) sox32 (ENSCLMG00005019184) sox17 (ENSCLMG00005019182) ENSCLMG00005019181 ENSCLMG00005019179 vps41 (ENSCLMG00005018297) #20 POU6F2 (ENSCLMG00005018281) #21 otulina (ENSCLMG00005018280) #22 ENSCLMG00005018278 ankha (ENSCLMG00005018274) myca (ENSCLMG00005018272) fam49bb (ENSCLMG00005018082) eef1a1l3 (ENSCLMG00005018075) ASAP1 (ENSCLMG00005014493) NFX1 (ENSCLMG00005014385) smarcd3b (ENSCLMG00005014373) CHPF2 (ENSCLMG00005014371) abcf2a (ENSCLMG00005013875) ENSCLMG00005013869 slc4a2b (ENSCLMG00005013816) ENSCLMG00005013812 ENSCLMG00005013811 ENSCLMG00005013810 Stickleback MODERN SPECIES 20 MYOM1 (ENSGACG00000004209) MYL12B (ENSGACG00000004252) FASTKD3 (ENSGACG00000004261) chmp5b (ENSGACG00000004275) OPRK1 (ENSGACG00000004282) RGS20 (ENSGACG00000004297) lypla1 (ENSGACG00000004303) mrpl15 (ENSGACG00000004336) sox32 (ENSGACG00000004344) sox17 (ENSGACG00000004347) ENSGACG00000004356 ENSGACG00000004359 ENSGACG00000004363 vps41 (ENSGACG00000004365) #20 POU6F2 (ENSGACG00000004422) #21 otulina (ENSGACG00000004435) #22 ENSGACG00000004436 ankha (ENSGACG00000004445) myca (ENSGACG00000004456) fam49bb (ENSGACG00000004460) eef1a1l3 (ENSGACG00000004505) ASAP1 (ENSGACG00000004538) ENSGACG00000004557 NFX1 (ENSGACG00000004560) smarcd3b (ENSGACG00000004586) CHPF2 (ENSGACG00000004595) abcf2a (ENSGACG00000004604) ENSGACG00000004661 slc4a2b (ENSGACG00000004664) ENSGACG00000004690 ENSGACG00000004694 Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Carangaria ANCESTRAL SPECIES 21 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Carangaria_A ANCESTRAL SPECIES 15 ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h.b ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000178871 ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Seriola ANCESTRAL SPECIES 27 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h.b ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Greater amberjack MODERN SPECIES 217 LPIN2 (ENSSDUG00000008211) MYOM1 (ENSSDUG00000008284) FASTKD3 (ENSSDUG00000008377) ENSSDUG00000008469 chmp5b (ENSSDUG00000008690) OPRK1 (ENSSDUG00000008713) RGS20 (ENSSDUG00000008724) lypla1 (ENSSDUG00000008747) mrpl15 (ENSSDUG00000008800) sox32 (ENSSDUG00000008853) sox17 (ENSSDUG00000008856) ENSSDUG00000008866 ENSSDUG00000008878 vps41 (ENSSDUG00000008907) #20 POU6F2 (ENSSDUG00000009014) #21 otulina (ENSSDUG00000009032) #22 ENSSDUG00000009039 ankha (ENSSDUG00000009056) myca (ENSSDUG00000009070) fam49bb (ENSSDUG00000009087) eef1a1l3 (ENSSDUG00000009163) ASAP1 (ENSSDUG00000009202) NFX1 (ENSSDUG00000009395) smarcd3b (ENSSDUG00000009485) CHPF2 (ENSSDUG00000009673) abcf2a (ENSSDUG00000009698) ENSSDUG00000009751 slc4a2b (ENSSDUG00000009824) ENSSDUG00000009855 ENSSDUG00000009867 ENSSDUG00000009876 Yellowtail amberjack MODERN SPECIES 2786 LPIN2 (ENSSLDG00000023308) MYOM1 (ENSSLDG00000023372) ENSSLDG00000023443 FASTKD3 (ENSSLDG00000023450) chmp5b (ENSSLDG00000023455) OPRK1 (ENSSLDG00000023482) RGS20 (ENSSLDG00000023492) lypla1 (ENSSLDG00000023510) mrpl15 (ENSSLDG00000023535) sox32 (ENSSLDG00000023548) sox17 (ENSSLDG00000023554) ENSSLDG00000023564 ENSSLDG00000023584 vps41 (ENSSLDG00000023609) #20 POU6F2 (ENSSLDG00000023665) #21 otulina (ENSSLDG00000023685) #22 ENSSLDG00000023688 ankha (ENSSLDG00000023694) myca (ENSSLDG00000023709) fam49bb (ENSSLDG00000023740) eef1a1l3 (ENSSLDG00000023761) ASAP1 (ENSSLDG00000023775) ENSSLDG00000023812 NFX1 (ENSSLDG00000023817) smarcd3b (ENSSLDG00000023831) CHPF2 (ENSSLDG00000023839) abcf2a (ENSSLDG00000023850) ENSSLDG00000023874 slc4a2b (ENSSLDG00000023917) ENSSLDG00000023951 ENSSLDG00000023956 Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT01060000248676.a.b ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j Tongue sole MODERN SPECIES 13 CDH18 (ENSCSEG00000000244) EPC1 (ENSCSEG00000000239) ENSCSEG00000000235 ENSCSEG00000000233 ENSCSEG00000000219 ENSCSEG00000000217 ggh (ENSCSEG00000000213) ENSCSEG00000000211 lypla1 (ENSCSEG00000019983) mrpl15 (ENSCSEG00000019973) sox32 (ENSCSEG00000019963) ENSCSEG00000019960 ENSCSEG00000019945 vps41 (ENSCSEG00000019919) #20 POU6F2 (ENSCSEG00000019909) #21 otulina (ENSCSEG00000019902) #22 ENSCSEG00000019897 ankha (ENSCSEG00000019891) myca (ENSCSEG00000019889) puf60b (ENSCSEG00000019887) nrbp2b (ENSCSEG00000019882) ENSCSEG00000019879 ENSCSEG00000019877 slc4a2b (ENSCSEG00000019871) ENSCSEG00000019865 abcf2a (ENSCSEG00000019855) CHPF2 (ENSCSEG00000019853) smarcd3b (ENSCSEG00000019844) NFX1 (ENSCSEG00000019832) ENSCSEG00000019827 ASAP1 (ENSCSEG00000019814) Anabantaria ANCESTRAL SPECIES 22 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Anabantoidei ANCESTRAL SPECIES 20 ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000166366 ENSGT00940000156694 ENSGT00940000154242.b.h ENSGT00940000157762 ENSGT00390000000481 #20 ENSGT00940000156175 #21 ENSGT00390000011176 #22 ENSGT00390000009802.b ENSGT00390000012189.c.b ENSGT00940000155285.b.j.a.b ENSGT00390000015159.b.a ENSGT00940000165526 ENSGT00940000158547.c ENSGT00940000156325 ENSGT00940000158945 ENSGT01050000244857.B.a ENSGT00630000089910 ENSGT00400000022514 ENSGT00940000158259.b ENSGT00400000024709.i ENSGT00400000024709.j ENSGT00390000004989.a.b Climbing perch MODERN SPECIES 11 LPIN2 (ENSATEG00000003541) MYOM1 (ENSATEG00000003376) MYL12B (ENSATEG00000003352) ENSATEG00000003307 ENSATEG00000003315 ENSATEG00000002927 RGS20 (ENSATEG00000002862) lypla1 (ENSATEG00000002817) mrpl15 (ENSATEG00000002782) sox32 (ENSATEG00000002737) sox17 (ENSATEG00000002736) ENSATEG00000030084 ENSATEG00000002677 vps41 (ENSATEG00000002605) #20 ENSATEG00000002547 #21 otulina (ENSATEG00000002497) #22 ENSATEG00000002491 ankha (ENSATEG00000026272) myca (ENSATEG00000002279) fam49bb (ENSATEG00000002221) ASAP1 (ENSATEG00000002089) ENSATEG00000002080 SMARCD3 (ENSATEG00000002061) ENSATEG00000002039 ABCF2 (ENSATEG00000001990) ENSATEG00000001889 slc4a2b (ENSATEG00000001881) ENSATEG00000027615 ENSATEG00000001869 ENSATEG00000001831 ENSATEG00000027507 Siamese fighting fish MODERN SPECIES 15 LPIN2 (ENSBSLG00000007133) MYOM1 (ENSBSLG00000007221) ENSBSLG00000007317 ENSBSLG00000007723 ENSBSLG00000007775 ENSBSLG00000007833 RGS20 (ENSBSLG00000007869) lypla1 (ENSBSLG00000007880) mrpl15 (ENSBSLG00000007948) sox32 (ENSBSLG00000007961) sox17 (ENSBSLG00000007974) ENSBSLG00000007985 ENSBSLG00000007995 vps41 (ENSBSLG00000008119) #20 POU6F2 (ENSBSLG00000010482) #21 otulina (ENSBSLG00000010498) #22 ENSBSLG00000010504 ENSBSLG00000010513 ankha (ENSBSLG00000010518) myca (ENSBSLG00000010568) fam49bb (ENSBSLG00000010686) eef1a1l3 (ENSBSLG00000010889) ASAP1 (ENSBSLG00000010963) NFX1 (ENSBSLG00000012452) smarcd3b (ENSBSLG00000012640) CHPF2 (ENSBSLG00000013088) abcf2a (ENSBSLG00000013379) ENSBSLG00000014389 slc4a2b (ENSBSLG00000014467) ENSBSLG00000015066 ENSBSLG00000015068 Spotted gar MODERN SPECIES 675 ENSLOCG00000011461 ENSLOCG00000011451 SFRP4 (ENSLOCG00000011445) epdr1 (ENSLOCG00000011436) stard3nl (ENSLOCG00000011426) ENSLOCG00000011415 TRGV9 (ENSLOCG00000018133) ##17 ENSLOCG00000011411 ##17 TRGV9 (ENSLOCG00000011394) ##17 ENSLOCG00000011384 ##17 ENSLOCG00000011374 ENSLOCG00000011369 ##17 amph (ENSLOCG00000011353) #18 vps41 (ENSLOCG00000011337) #20 POU6F2 (ENSLOCG00000011317) #21 otulina (ENSLOCG00000011304) #22 otulinb (ENSLOCG00000011294) ankhb (ENSLOCG00000011283) myca (ENSLOCG00000011270) fam49bb (ENSLOCG00000011261) eef1a1l3 (ENSLOCG00000011245) asap1a (ENSLOCG00000011231) NFX1 (ENSLOCG00000011211) ENSLOCG00000011201 ENSLOCG00000011184 chmp5b (ENSLOCG00000011176) bag1 (ENSLOCG00000011163) FASTKD3 (ENSLOCG00000011153) myl12.1 (ENSLOCG00000011144) myom1a (ENSLOCG00000011117) LPIN2 (ENSLOCG00000011093) Reedfish MODERN SPECIES 368 ENSECRG00000013867 #22