Tetrapoda ANCESTRAL SPECIES 26 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00980000202663 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000159286.b ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000164745.c.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Amniota ANCESTRAL SPECIES 46 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000164745.c.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00530000063825.B Mammalia ANCESTRAL SPECIES 31 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000164745.c.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Theria ANCESTRAL SPECIES 2 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Boreoeutheria ANCESTRAL SPECIES 6 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Euarchontoglires ANCESTRAL SPECIES 6 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Primates ANCESTRAL SPECIES 6 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Haplorrhini ANCESTRAL SPECIES 3 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Simiiformes ANCESTRAL SPECIES 4 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Catarrhini ANCESTRAL SPECIES 4 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.i.a ##27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b.s #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.i.a ##27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Macaca ANCESTRAL SPECIES 6 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897.j #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b.s #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.i.a ##27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Macaca_a ANCESTRAL SPECIES 6 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897.j #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b.s.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.i.a ##27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Crab-eating macaque MODERN SPECIES 2 PRR13 (ENSMFAG00000040262) #7 ENSMFAG00000044356 #8 MAP3K12 (ENSMFAG00000043896) #9 TARBP2 (ENSMFAG00000013567) #10 NPFF (ENSMFAG00000007389) #11 ATF7 (ENSMFAG00000002429) #12 ENSMFAG00000045028 #13 CALCOCO1 (ENSMFAG00000002103) #14 ENSMFAG00000043577 #15 HOXC13 (ENSMFAG00000062591) #16 HOXC12 (ENSMFAG00000002263) #17 ENSMFAG00000039005 #18 HOXC9 (ENSMFAG00000042260) #19 HOXC8 (ENSMFAG00000002443) #20 HOXC6 (ENSMFAG00000033368) #21 HOXC5 (ENSMFAG00000058266) #22 SMUG1 (ENSMFAG00000038455) #23 CBX5 (ENSMFAG00000003762) #24 ENSMFAG00000031561 #25 NFE2 (ENSMFAG00000044203) #26 COPZ1 (ENSMFAG00000045686) #27 GPR84 (ENSMFAG00000030281) #28 ZNF385A (ENSMFAG00000042192) #29 ITGA5 (ENSMFAG00000036877) #30 ENSMFAG00000047951 #31 GTSF1 (ENSMFAG00000041178) #32 NCKAP1L (ENSMFAG00000001155) #33 PDE1B (ENSMFAG00000033293) #34 PPP1R1A (ENSMFAG00000037982) #35 LACRT (ENSMFAG00000063533) #36 DCD (ENSMFAG00000040810) #37 Rhesus MODERN SPECIES 2 AMHR2 (ENSMMUG00000020037) PRR13 (ENSMMUG00000017738) #7 ENSMMUG00000006608 #8 MAP3K12 (ENSMMUG00000006613) #9 TARBP2 (ENSMMUG00000018492) #10 ATF7 (ENSMMUG00000022313) #12 ATP5MC2 (ENSMMUG00000016241) #13 CALCOCO1 (ENSMMUG00000009457) #14 HOXC13 (ENSMMUG00000054600) #16 HOXC12 (ENSMMUG00000004541) #17 HOXC11 (ENSMMUG00000000924) #18 HOXC10 (ENSMMUG00000000925) HOXC9 (ENSMMUG00000063144) #19 HOXC8 (ENSMMUG00000063741) #20 HOXC6 (ENSMMUG00000046055) #21 HOXC5 (ENSMMUG00000062271) #22 HOXC4 (ENSMMUG00000055610) SMUG1 (ENSMMUG00000011642) #23 CBX5 (ENSMMUG00000004950) #24 ENSMMUG00000065167 HNRNPA1 (ENSMMUG00000012989) ##25 NFE2 (ENSMMUG00000012992) #26 COPZ1 (ENSMMUG00000005182) ##27 GPR84 (ENSMMUG00000016671) #28 ZNF385A (ENSMMUG00000016669) #29 ITGA5 (ENSMMUG00000003755) #30 GTSF1 (ENSMMUG00000003758) #32 NCKAP1L (ENSMMUG00000000108) #33 PDE1B (ENSMMUG00000000111) #34 PPP1R1A (ENSMMUG00000000113) #35 LACRT (ENSMMUG00000000115) #36 Pig-tailed macaque MODERN SPECIES 526 ENSMNEG00000031958 #8 MAP3K12 (ENSMNEG00000038360) #9 TARBP2 (ENSMNEG00000036477) #10 NPFF (ENSMNEG00000043486) #11 ATF7 (ENSMNEG00000042742) #12 ENSMNEG00000039677 #13 CALCOCO1 (ENSMNEG00000044215) #14 ENSMNEG00000028594 #15 HOXC13 (ENSMNEG00000044057) #16 HOXC12 (ENSMNEG00000028886) #17 HOXC11 (ENSMNEG00000041343) #18 HOXC10 (ENSMNEG00000039805) HOXC9 (ENSMNEG00000036510) #19 HOXC8 (ENSMNEG00000039027) #20 HOXC6 (ENSMNEG00000033520) #21 HOXC5 (ENSMNEG00000000036) #22 HOXC4 (ENSMNEG00000038564) SMUG1 (ENSMNEG00000042533) #23 ENSMNEG00000023733 CBX5 (ENSMNEG00000045439) #24 ENSMNEG00000042992 #25 NFE2 (ENSMNEG00000035082) #26 COPZ1 (ENSMNEG00000039565) ##27 GPR84 (ENSMNEG00000017529) #28 ZNF385A (ENSMNEG00000039249) #29 ITGA5 (ENSMNEG00000036796) #30 GTSF1 (ENSMNEG00000036779) #32 NCKAP1L (ENSMNEG00000030374) #33 PDE1B (ENSMNEG00000036202) #34 PPP1R1A (ENSMNEG00000019110) #35 LACRT (ENSMNEG00000037733) #36 Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b.s #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.i.a ##27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Olive baboon MODERN SPECIES 19 PCBP2 (ENSPANG00000029560) #8 PRR13 (ENSPANG00000022134) #7 AMHR2 (ENSPANG00000017127) TARBP2 (ENSPANG00000010689) #10 NPFF (ENSPANG00000013483) #11 ATF7 (ENSPANG00000013986) #12 ENSPANG00000014072 #13 CALCOCO1 (ENSPANG00000011373) #14 HOXC13 (ENSPANG00000002383) #16 HOXC12 (ENSPANG00000010379) #17 HOXC11 (ENSPANG00000016365) #18 HOXC10 (ENSPANG00000004242) HOXC9 (ENSPANG00000046239) #19 HOXC8 (ENSPANG00000044907) #20 HOXC6 (ENSPANG00000018054) #21 HOXC5 (ENSPANG00000037550) #22 HOXC4 (ENSPANG00000051288) SMUG1 (ENSPANG00000013482) #23 CBX5 (ENSPANG00000029866) #24 HNRNPA1 (ENSPANG00000010434) #25 NFE2 (ENSPANG00000013192) #26 ENSPANG00000008970 #27 GPR84 (ENSPANG00000015365) #28 ZNF385A (ENSPANG00000020165) #29 ITGA5 (ENSPANG00000016195) #30 ENSPANG00000038858 GTSF1 (ENSPANG00000020579) #32 NCKAP1L (ENSPANG00000006651) #33 PDE1B (ENSPANG00000014884) #34 PPP1R1A (ENSPANG00000002382) #35 LACRT (ENSPANG00000040904) #36 Cercopithecinae_d ANCESTRAL SPECIES 3 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b.s #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.i.a ##27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Sooty mangabey MODERN SPECIES 571 SP7 (ENSCATG00000035712) SP1 (ENSCATG00000017070) AMHR2 (ENSCATG00000002460) PRR13 (ENSCATG00000043426) #7 PCBP2 (ENSCATG00000036013) #8 MAP3K12 (ENSCATG00000038068) #9 TARBP2 (ENSCATG00000026344) #10 NPFF (ENSCATG00000043924) #11 ATF7 (ENSCATG00000016814) #12 ENSCATG00000031402 #13 CALCOCO1 (ENSCATG00000029411) #14 HOXC13 (ENSCATG00000013447) #16 HOXC12 (ENSCATG00000041764) #17 HOXC8 (ENSCATG00000043163) #20 HOXC6 (ENSCATG00000004493) #21 HOXC5 (ENSCATG00000043360) #22 HOXC4 (ENSCATG00000036624) SMUG1 (ENSCATG00000042299) #23 ENSCATG00000017526 CBX5 (ENSCATG00000036967) #24 HNRNPA1 (ENSCATG00000043560) #25 NFE2 (ENSCATG00000042442) #26 COPZ1 (ENSCATG00000045087) ##27 ZNF385A (ENSCATG00000035239) #29 ITGA5 (ENSCATG00000006830) #30 GTSF1 (ENSCATG00000036328) #32 NCKAP1L (ENSCATG00000039622) #33 PDE1B (ENSCATG00000044423) #34 PPP1R1A (ENSCATG00000031677) #35 LACRT (ENSCATG00000029829) #36 DCD (ENSCATG00000036877) #37 Drill MODERN SPECIES 1092 PRR13 (ENSMLEG00000044420) #7 PCBP2 (ENSMLEG00000033368) #8 MAP3K12 (ENSMLEG00000028571) #9 TARBP2 (ENSMLEG00000029583) #10 NPFF (ENSMLEG00000043253) #11 ATF7 (ENSMLEG00000034657) #12 ENSMLEG00000035549 #13 CALCOCO1 (ENSMLEG00000026953) #14 HOXC12 (ENSMLEG00000034922) #17 HOXC11 (ENSMLEG00000035031) #18 HOXC10 (ENSMLEG00000041536) HOXC9 (ENSMLEG00000033394) #19 HOXC8 (ENSMLEG00000001814) #20 HOXC6 (ENSMLEG00000003855) #21 HOXC4 (ENSMLEG00000001957) HOXC5 (ENSMLEG00000038763) #22 SMUG1 (ENSMLEG00000009954) #23 ENSMLEG00000027378 CBX5 (ENSMLEG00000036741) #24 HNRNPA1 (ENSMLEG00000044414) #25 NFE2 (ENSMLEG00000034045) #26 ENSMLEG00000003651 ##27 ENSMLEG00000027572 #28 ENSMLEG00000021484 #28 ZNF385A (ENSMLEG00000026475) #29 ITGA5 (ENSMLEG00000036758) #30 GTSF1 (ENSMLEG00000028375) #32 NCKAP1L (ENSMLEG00000043743) #33 PDE1B (ENSMLEG00000043512) #34 PPP1R1A (ENSMLEG00000042421) #35 LACRT (ENSMLEG00000034565) #36 Vervet Monkey MODERN SPECIES 2 PRR13 (ENSCSAG00000005490) #7 ENSCSAG00000005487 #8 MAP3K12 (ENSCSAG00000005483) #9 TARBP2 (ENSCSAG00000005479) #10 NPFF (ENSCSAG00000005475) #11 ATF7 (ENSCSAG00000005473) #12 ENSCSAG00000005468 #13 CALCOCO1 (ENSCSAG00000005466) #14 HOXC13 (ENSCSAG00000005461) #16 HOXC12 (ENSCSAG00000005459) #17 HOXC11 (ENSCSAG00000005457) #18 HOXC10 (ENSCSAG00000005455) HOXC9 (ENSCSAG00000005453) #19 HOXC8 (ENSCSAG00000005451) #20 HOXC6 (ENSCSAG00000005449) #21 HOXC5 (ENSCSAG00000005447) #22 HOXC4 (ENSCSAG00000005445) SMUG1 (ENSCSAG00000005441) #23 CBX5 (ENSCSAG00000005440) #24 HNRNPA1 (ENSCSAG00000005436) #25 NFE2 (ENSCSAG00000005427) #26 COPZ1 (ENSCSAG00000005421) ##27 GPR84 (ENSCSAG00000019259) #28 ZNF385A (ENSCSAG00000005407) #29 ITGA5 (ENSCSAG00000005401) #30 GTSF1 (ENSCSAG00000005394) #32 NCKAP1L (ENSCSAG00000005392) #33 PDE1B (ENSCSAG00000005388) #34 PPP1R1A (ENSCSAG00000005385) #35 ENSCSAG00000005382 LACRT (ENSCSAG00000005375) #36 Rhinopithecus ANCESTRAL SPECIES 4 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 Golden snub-nosed monkey MODERN SPECIES 1766 ENSRROG00000043448 #7 PCBP2 (ENSRROG00000041377) #8 MAP3K12 (ENSRROG00000029455) #9 TARBP2 (ENSRROG00000044783) #10 NPFF (ENSRROG00000042539) #11 ATF7 (ENSRROG00000031964) #12 ENSRROG00000017152 #13 CALCOCO1 (ENSRROG00000035160) #14 HOXC13 (ENSRROG00000038970) #16 HOXC12 (ENSRROG00000039382) #17 HOXC11 (ENSRROG00000045396) #18 HOXC10 (ENSRROG00000043103) HOXC9 (ENSRROG00000035646) #19 HOXC8 (ENSRROG00000037014) #20 HOXC6 (ENSRROG00000038476) #21 HOXC5 (ENSRROG00000029940) #22 HOXC4 (ENSRROG00000032086) ENSRROG00000013188 SMUG1 (ENSRROG00000042549) #23 ENSRROG00000026794 ENSRROG00000040559 #24 HNRNPA1 (ENSRROG00000030782) #25 NFE2 (ENSRROG00000031892) #26 COPZ1 (ENSRROG00000029403) #27 GPR84 (ENSRROG00000025298) #28 ZNF385A (ENSRROG00000027319) #29 ITGA5 (ENSRROG00000045615) #30 GTSF1 (ENSRROG00000008137) #32 NCKAP1L (ENSRROG00000023820) #33 PDE1B (ENSRROG00000041120) #34 PPP1R1A (ENSRROG00000039028) #35 Black snub-nosed monkey MODERN SPECIES 1517 ENSRBIG00000039085 #8 MAP3K12 (ENSRBIG00000030406) #9 NPFF (ENSRBIG00000015075) #11 TARBP2 (ENSRBIG00000027150) #10 ATF7 (ENSRBIG00000032555) #12 ATP5MC2 (ENSRBIG00000027608) CALCOCO1 (ENSRBIG00000028128) #14 HOXC13 (ENSRBIG00000044979) #16 HOXC12 (ENSRBIG00000044976) #17 HOXC11 (ENSRBIG00000043565) #18 HOXC10 (ENSRBIG00000029635) HOXC9 (ENSRBIG00000028081) #19 HOXC8 (ENSRBIG00000035303) #20 HOXC6 (ENSRBIG00000041311) #21 HOXC5 (ENSRBIG00000044630) #22 HOXC4 (ENSRBIG00000042398) SMUG1 (ENSRBIG00000029643) #23 ENSRBIG00000021086 CBX5 (ENSRBIG00000044828) #24 HNRNPA1 (ENSRBIG00000029387) #25 NFE2 (ENSRBIG00000004765) #26 COPZ1 (ENSRBIG00000018812) #27 GPR84 (ENSRBIG00000030950) #28 ZNF385A (ENSRBIG00000040535) #29 ITGA5 (ENSRBIG00000033135) #30 ENSRBIG00000043438 #32 NCKAP1L (ENSRBIG00000032548) #33 PDE1B (ENSRBIG00000000767) #34 PPP1R1A (ENSRBIG00000041637) #35 LACRT (ENSRBIG00000038880) #36 Hominoidea ANCESTRAL SPECIES 5 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748.a #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Hominidae ANCESTRAL SPECIES 4 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748.a #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748.a #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748.a #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Pan ANCESTRAL SPECIES 4 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748.a #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Bonobo MODERN SPECIES 3 PRR13 (ENSPPAG00000035773) #7 ENSPPAG00000027632 #8 MAP3K12 (ENSPPAG00000040619) #9 TARBP2 (ENSPPAG00000030429) #10 NPFF (ENSPPAG00000002483) #11 ATF7 (ENSPPAG00000036335) #12 ENSPPAG00000037762 #13 CALCOCO1 (ENSPPAG00000029982) #14 HOXC13 (ENSPPAG00000035078) #16 HOXC12 (ENSPPAG00000029866) #17 HOXC11 (ENSPPAG00000043277) #18 HOXC10 (ENSPPAG00000035276) HOXC9 (ENSPPAG00000035907) #19 HOXC8 (ENSPPAG00000033394) #20 HOXC6 (ENSPPAG00000036938) #21 HOXC5 (ENSPPAG00000033038) #22 HOXC4 (ENSPPAG00000038534) SMUG1 (ENSPPAG00000033677) #23 CBX5 (ENSPPAG00000028337) #24 ENSPPAG00000018027 #25 NFE2 (ENSPPAG00000025801) #26 COPZ1 (ENSPPAG00000034633) #27 GPR84 (ENSPPAG00000007711) #28 ZNF385A (ENSPPAG00000035416) #29 ITGA5 (ENSPPAG00000041089) #30 GTSF1 (ENSPPAG00000028506) #32 NCKAP1L (ENSPPAG00000038716) #33 ENSPPAG00000000426 #34 PPP1R1A (ENSPPAG00000030568) #35 LACRT (ENSPPAG00000043495) #36 DCD (ENSPPAG00000040901) #37 Chimpanzee MODERN SPECIES 3 ENSPTRG00000049293 PCBP2 (ENSPTRG00000005018) #8 MAP3K12 (ENSPTRG00000005019) #9 TARBP2 (ENSPTRG00000005020) #10 NPFF (ENSPTRG00000005021) #11 ATF7 (ENSPTRG00000005022) #12 ATP5MC2 (ENSPTRG00000005023) #13 CALCOCO1 (ENSPTRG00000005024) #14 HOXC13 (ENSPTRG00000005025) #16 HOXC12 (ENSPTRG00000005026) #17 HOXC11 (ENSPTRG00000005027) #18 HOXC10 (ENSPTRG00000005028) HOXC9 (ENSPTRG00000005029) #19 HOXC8 (ENSPTRG00000005030) #20 HOXC6 (ENSPTRG00000022997) #21 HOXC5 (ENSPTRG00000052329) #22 HOXC4 (ENSPTRG00000048069) SMUG1 (ENSPTRG00000005033) #23 CBX5 (ENSPTRG00000005034) #24 HNRPA1LK1 (ENSPTRG00000049417) #25 NFE2 (ENSPTRG00000005036) #26 COPZ1 (ENSPTRG00000005037) #27 GPR84 (ENSPTRG00000005038) #28 ZNF385A (ENSPTRG00000005039) #29 ITGA5 (ENSPTRG00000005040) #30 GTSF1 (ENSPTRG00000005041) #32 NCKAP1L (ENSPTRG00000005042) #33 PDE1B (ENSPTRG00000005043) #34 PPP1R1A (ENSPTRG00000005044) #35 LACRT (ENSPTRG00000005045) #36 DCD (ENSPTRG00000005046) #37 Human MODERN SPECIES 3 TARBP2 (ENSG00000139546) #10 NPFF (ENSG00000139574) #11 ATF7-NPFF (ENSG00000267281) ATF7 (ENSG00000170653) #12 ATP5MC2 (ENSG00000135390) CALCOCO1 (ENSG00000012822) #14 HOXC13 (ENSG00000123364) #16 HOXC12 (ENSG00000123407) #17 HOXC11 (ENSG00000123388) #18 HOXC10 (ENSG00000180818) ENSG00000273049 HOXC6 (ENSG00000197757) #21 HOXC9 (ENSG00000180806) #19 HOXC8 (ENSG00000037965) #20 HOXC4 (ENSG00000198353) HOXC5 (ENSG00000172789) #22 SMUG1 (ENSG00000123415) #23 CBX5 (ENSG00000094916) #24 HNRNPA1 (ENSG00000135486) #25 NFE2 (ENSG00000123405) #26 COPZ1 (ENSG00000111481) #27 GPR84 (ENSG00000139572) #28 ZNF385A (ENSG00000161642) #29 ITGA5 (ENSG00000161638) #30 GTSF1 (ENSG00000170627) #32 NCKAP1L (ENSG00000123338) #33 PDE1B (ENSG00000123360) #34 PPP1R1A (ENSG00000135447) #35 LACRT (ENSG00000135413) #36 DCD (ENSG00000161634) #37 MUCL1 (ENSG00000172551) Gorilla MODERN SPECIES 3 PRR13 (ENSGGOG00000012608) #7 PCBP2 (ENSGGOG00000012613) #8 MAP3K12 (ENSGGOG00000012622) #9 TARBP2 (ENSGGOG00000012637) #10 NPFF (ENSGGOG00000012647) #11 ATF7 (ENSGGOG00000015195) #12 ENSGGOG00000015641 #13 CALCOCO1 (ENSGGOG00000011541) #14 HOXC13 (ENSGGOG00000015765) #16 HOXC12 (ENSGGOG00000023684) #17 HOXC11 (ENSGGOG00000026566) #18 HOXC10 (ENSGGOG00000001105) HOXC9 (ENSGGOG00000006282) #19 HOXC8 (ENSGGOG00000006289) #20 HOXC6 (ENSGGOG00000001628) #21 HOXC5 (ENSGGOG00000001629) #22 HOXC4 (ENSGGOG00000037118) SMUG1 (ENSGGOG00000000039) #23 CBX5 (ENSGGOG00000000041) #24 HNRNPA1 (ENSGGOG00000003040) #25 NFE2 (ENSGGOG00000003043) #26 COPZ1 (ENSGGOG00000008311) #27 GPR84 (ENSGGOG00000002657) #28 ENSGGOG00000002658 #29 ITGA5 (ENSGGOG00000000722) #30 GTSF1 (ENSGGOG00000016063) #32 NCKAP1L (ENSGGOG00000008356) #33 PDE1B (ENSGGOG00000008372) #34 PPP1R1A (ENSGGOG00000008380) #35 LACRT (ENSGGOG00000008386) #36 DCD (ENSGGOG00000008392) #37 Orangutan MODERN SPECIES 3 PRR13 (ENSPPYG00000034305) #7 PCBP2 (ENSPPYG00000004581) #8 MAP3K12 (ENSPPYG00000004582) #9 TARBP2 (ENSPPYG00000004583) #10 NPFF (ENSPPYG00000004584) #11 ATF7 (ENSPPYG00000004585) #12 ATP5MC2 (ENSPPYG00000004586) #13 CALCOCO1 (ENSPPYG00000004587) #14 HOXC13 (ENSPPYG00000004588) #16 HOXC12 (ENSPPYG00000004589) #17 ENSPPYG00000004590 #18 HOXC10 (ENSPPYG00000004591) HOXC9 (ENSPPYG00000004592) #19 HOXC8 (ENSPPYG00000004593) #20 HOXC6 (ENSPPYG00000004594) #21 HOXC5 (ENSPPYG00000004595) #22 HOXC4 (ENSPPYG00000004596) SMUG1 (ENSPPYG00000004598) #23 CBX5 (ENSPPYG00000038909) #24 HNRNPA1 (ENSPPYG00000025850) #25 NFE2 (ENSPPYG00000004600) #26 COPZ1 (ENSPPYG00000004601) #27 GPR84 (ENSPPYG00000004602) #28 ZNF385A (ENSPPYG00000004603) #29 ITGA5 (ENSPPYG00000004604) #30 GTSF1 (ENSPPYG00000004605) #32 NCKAP1L (ENSPPYG00000004606) #33 PDE1B (ENSPPYG00000004607) #34 PPP1R1A (ENSPPYG00000004608) #35 LACRT (ENSPPYG00000004609) #36 DCD (ENSPPYG00000004610) #37 Gibbon MODERN SPECIES 1 PRR13 (ENSNLEG00000034057) #7 PCBP2 (ENSNLEG00000017693) #8 MAP3K12 (ENSNLEG00000017692) #9 TARBP2 (ENSNLEG00000017690) #10 NPFF (ENSNLEG00000017689) #11 ENSNLEG00000017688 #12 ENSNLEG00000017686 #13 CALCOCO1 (ENSNLEG00000017685) #14 HOXC13 (ENSNLEG00000017680) #16 HOXC12 (ENSNLEG00000017683) #17 ENSNLEG00000035339 #18 HOXC10 (ENSNLEG00000017679) HOXC9 (ENSNLEG00000017678) #19 HOXC8 (ENSNLEG00000017677) #20 ENSNLEG00000033368 #21 HOXC5 (ENSNLEG00000017676) #22 HOXC4 (ENSNLEG00000017675) SMUG1 (ENSNLEG00000017673) #23 CBX5 (ENSNLEG00000017671) #24 HNRNPA1 (ENSNLEG00000017659) #25 NFE2 (ENSNLEG00000017657) #26 COPZ1 (ENSNLEG00000035667) #27 GPR84 (ENSNLEG00000017649) #28 ZNF385A (ENSNLEG00000017645) #29 ITGA5 (ENSNLEG00000017637) #30 GTSF1 (ENSNLEG00000017635) #32 NCKAP1L (ENSNLEG00000017630) #33 PDE1B (ENSNLEG00000017627) #34 PPP1R1A (ENSNLEG00000017625) #35 ENSNLEG00000029310 #36 ENSNLEG00000017623 #37 Platyrrhini ANCESTRAL SPECIES 6 ENSGT00730000111608.w #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455.i.d ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897.k #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a.y.b.a.b.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Cebidae ANCESTRAL SPECIES 2 ENSGT00730000111608.w #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455.i.d ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897.k #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a.z ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Cebidae_a ANCESTRAL SPECIES 5 ENSGT00730000111608.w #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455.i.d.b ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897.k #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a.z ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000159286.b.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000163391.B #36 ENSGT00940000163391.A #37 Capuchin MODERN SPECIES 285 PRR13 (ENSCCAG00000036400) #7 PCBP2 (ENSCCAG00000012038) #8 MAP3K12 (ENSCCAG00000036528) #9 TARBP2 (ENSCCAG00000033025) #10 NPFF (ENSCCAG00000034365) #11 ATF7 (ENSCCAG00000034241) #12 ENSCCAG00000036221 CALCOCO1 (ENSCCAG00000035008) #14 HOXC13 (ENSCCAG00000023554) #16 HOXC12 (ENSCCAG00000035755) #17 HOXC11 (ENSCCAG00000020099) #18 HOXC10 (ENSCCAG00000037870) HOXC9 (ENSCCAG00000004390) #19 HOXC8 (ENSCCAG00000035957) #20 HOXC6 (ENSCCAG00000028505) #21 HOXC5 (ENSCCAG00000035017) #22 HOXC4 (ENSCCAG00000030761) ENSCCAG00000035935 #23 CBX5 (ENSCCAG00000024410) #24 ENSCCAG00000033451 ##25 NFE2 (ENSCCAG00000027905) #26 COPZ1 (ENSCCAG00000013641) #27 ENSCCAG00000019051 ZNF385A (ENSCCAG00000033332) #29 ITGA5 (ENSCCAG00000021214) #30 GTSF1 (ENSCCAG00000032808) #32 NCKAP1L (ENSCCAG00000032586) #33 PDE1B (ENSCCAG00000034020) #34 PPP1R1A (ENSCCAG00000027579) #35 LACRT (ENSCCAG00000020335) #36 DCD (ENSCCAG00000009193) #37 Bolivian squirrel monkey MODERN SPECIES 153 PRR13 (ENSSBOG00000024818) #7 PCBP2 (ENSSBOG00000020308) #8 MAP3K12 (ENSSBOG00000035393) #9 TARBP2 (ENSSBOG00000027305) #10 NPFF (ENSSBOG00000028463) #11 ATF7 (ENSSBOG00000025454) #12 ENSSBOG00000012565 CALCOCO1 (ENSSBOG00000033966) #14 HOXC12 (ENSSBOG00000028822) #17 HOXC11 (ENSSBOG00000031215) #18 HOXC10 (ENSSBOG00000034914) HOXC9 (ENSSBOG00000027042) #19 HOXC8 (ENSSBOG00000023828) #20 HOXC4 (ENSSBOG00000029739) HOXC6 (ENSSBOG00000030381) #21 HOXC5 (ENSSBOG00000032933) #22 ENSSBOG00000011270 #23 CBX5 (ENSSBOG00000026151) #24 ENSSBOG00000020034 ##25 NFE2 (ENSSBOG00000031941) #26 COPZ1 (ENSSBOG00000027656) #27 ZNF385A (ENSSBOG00000030395) #29 ITGA5 (ENSSBOG00000019449) #30 GTSF1 (ENSSBOG00000029460) #32 NCKAP1L (ENSSBOG00000021954) #33 PDE1B (ENSSBOG00000023835) #34 PPP1R1A (ENSSBOG00000031688) #35 LACRT (ENSSBOG00000030289) #36 DCD (ENSSBOG00000022167) #37 ENSSBOG00000021049 TESPA1 (ENSSBOG00000029292) Marmoset MODERN SPECIES 21 ENSCJAG00000072130 #7 ENSCJAG00000018590 #8 MAP3K12 (ENSCJAG00000018634) #9 TARBP2 (ENSCJAG00000018668) #10 NPFF (ENSCJAG00000018696) #11 ATF7 (ENSCJAG00000018699) #12 ATP5MC2 (ENSCJAG00000039433) ENSCJAG00000086022 CALCOCO1 (ENSCJAG00000018726) #14 HOXC13 (ENSCJAG00000044250) #16 HOXC12 (ENSCJAG00000018806) #17 HOXC11 (ENSCJAG00000018808) #18 HOXC9 (ENSCJAG00000018819) #19 HOXC10 (ENSCJAG00000018811) HOXC6 (ENSCJAG00000043282) #21 HOXC5 (ENSCJAG00000044096) #22 HOXC4 (ENSCJAG00000078505) ENSCJAG00000044092 #23 ENSCJAG00000078029 CBX5 (ENSCJAG00000018847) #24 ENSCJAG00000018864 ##25 NFE2 (ENSCJAG00000018880) #26 COPZ1 (ENSCJAG00000018887) #27 GPR84 (ENSCJAG00000018894) #28 ZNF385A (ENSCJAG00000018897) #29 ITGA5 (ENSCJAG00000018921) #30 GTSF1 (ENSCJAG00000018968) #32 NCKAP1L (ENSCJAG00000018974) #33 PDE1B (ENSCJAG00000019038) #34 ENSCJAG00000040329 #35 LACRT (ENSCJAG00000019085) #36 Mas night monkey MODERN SPECIES 1031 PCBP2 (ENSANAG00000032275) #8 MAP3K12 (ENSANAG00000020253) #9 TARBP2 (ENSANAG00000034453) #10 NPFF (ENSANAG00000031895) #11 ATF7 (ENSANAG00000032521) #12 ENSANAG00000035655 CALCOCO1 (ENSANAG00000022801) #14 HOXC13 (ENSANAG00000032093) #16 HOXC12 (ENSANAG00000032833) #17 HOXC11 (ENSANAG00000032883) #18 HOXC10 (ENSANAG00000033259) HOXC4 (ENSANAG00000033194) HOXC9 (ENSANAG00000036543) #19 HOXC8 (ENSANAG00000020854) #20 HOXC6 (ENSANAG00000022530) #21 HOXC5 (ENSANAG00000034479) #22 SMUG1 (ENSANAG00000024467) #23 CBX5 (ENSANAG00000023641) #24 ENSANAG00000023645 ##25 NFE2 (ENSANAG00000025350) #26 COPZ1 (ENSANAG00000031944) #27 ENSANAG00000025073 GPR84 (ENSANAG00000004247) #28 ZNF385A (ENSANAG00000001893) #29 ITGA5 (ENSANAG00000036479) #30 GTSF1 (ENSANAG00000024529) #32 ENSANAG00000023191 NCKAP1L (ENSANAG00000025148) #33 PDE1B (ENSANAG00000034831) #34 PPP1R1A (ENSANAG00000036632) #35 LACRT (ENSANAG00000021062) #36 Tarsier MODERN SPECIES 4750 ENSTSYG00000034602 HOXC13 (ENSTSYG00000028659) #16 HOXC12 (ENSTSYG00000026419) #17 HOXC11 (ENSTSYG00000032928) #18 HOXC10 (ENSTSYG00000028872) HOXC9 (ENSTSYG00000032116) #19 HOXC8 (ENSTSYG00000027823) #20 HOXC4 (ENSTSYG00000026149) HOXC6 (ENSTSYG00000006204) #21 HOXC5 (ENSTSYG00000002723) #22 Strepsirrhini ANCESTRAL SPECIES 3 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Lemuriformes ANCESTRAL SPECIES 1 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Mouse lemur MODERN SPECIES 29 ENSMICG00000011651 #8 MAP3K12 (ENSMICG00000011662) #9 TARBP2 (ENSMICG00000027441) #10 NPFF (ENSMICG00000047279) #11 ATF7 (ENSMICG00000011677) #12 ENSMICG00000045673 ENSMICG00000011686 #13 CALCOCO1 (ENSMICG00000011694) #14 HOXC13 (ENSMICG00000042545) #16 HOXC12 (ENSMICG00000011709) #17 HOXC11 (ENSMICG00000011710) #18 HOXC10 (ENSMICG00000027410) HOXC9 (ENSMICG00000011714) #19 HOXC8 (ENSMICG00000046543) #20 HOXC6 (ENSMICG00000046781) #21 HOXC5 (ENSMICG00000042167) #22 HOXC4 (ENSMICG00000041983) ENSMICG00000034005 #23 ENSMICG00000026511 CBX5 (ENSMICG00000041561) #24 HNRNPA1 (ENSMICG00000032477) #25 NFE2 (ENSMICG00000031522) #26 COPZ1 (ENSMICG00000008401) #27 ZNF385A (ENSMICG00000037401) #29 ITGA5 (ENSMICG00000008420) #30 GTSF1 (ENSMICG00000008444) #32 NCKAP1L (ENSMICG00000008453) #33 PDE1B (ENSMICG00000043971) #34 PPP1R1A (ENSMICG00000008492) #35 TESPA1 (ENSMICG00000038700) ENSMICG00000008320 Lemuriformes_a ANCESTRAL SPECIES 8 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00940000160763 Coquerels sifaka MODERN SPECIES 91 PCBP2 (ENSPCOG00000025737) #8 MAP3K12 (ENSPCOG00000027308) #9 TARBP2 (ENSPCOG00000013102) #10 NPFF (ENSPCOG00000024092) #11 ATF7 (ENSPCOG00000018139) #12 ENSPCOG00000016053 #13 CALCOCO1 (ENSPCOG00000028080) #14 HOXC13 (ENSPCOG00000027689) #16 HOXC12 (ENSPCOG00000024756) #17 HOXC11 (ENSPCOG00000015117) #18 HOXC10 (ENSPCOG00000017406) HOXC9 (ENSPCOG00000027236) #19 HOXC8 (ENSPCOG00000014957) #20 HOXC6 (ENSPCOG00000025765) #21 HOXC4 (ENSPCOG00000027216) HOXC5 (ENSPCOG00000016116) #22 ENSPCOG00000016093 #23 CBX5 (ENSPCOG00000023520) #24 ENSPCOG00000015986 #25 NFE2 (ENSPCOG00000018360) #26 COPZ1 (ENSPCOG00000016263) #27 ZNF385A (ENSPCOG00000014689) #29 ITGA5 (ENSPCOG00000014049) #30 GTSF1 (ENSPCOG00000016907) #32 NCKAP1L (ENSPCOG00000021337) #33 PDE1B (ENSPCOG00000019010) #34 PPP1R1A (ENSPCOG00000024719) #35 ENSPCOG00000026780 ENSPCOG00000026189 ENSPCOG00000026011 TESPA1 (ENSPCOG00000015648) Greater bamboo lemur MODERN SPECIES 326 ENSPSMG00000017218 ENSPSMG00000017215 #13 CALCOCO1 (ENSPSMG00000017179) #14 HOXC13 (ENSPSMG00000017107) #16 HOXC12 (ENSPSMG00000017098) #17 HOXC11 (ENSPSMG00000017076) #18 HOXC10 (ENSPSMG00000017068) HOXC9 (ENSPSMG00000017055) #19 HOXC8 (ENSPSMG00000017050) #20 HOXC6 (ENSPSMG00000017043) #21 HOXC5 (ENSPSMG00000017033) #22 HOXC4 (ENSPSMG00000017025) SMUG1 (ENSPSMG00000017015) #23 CBX5 (ENSPSMG00000017008) #24 HNRNPA1 (ENSPSMG00000016993) #25 NFE2 (ENSPSMG00000016977) #26 COPZ1 (ENSPSMG00000016973) #27 GPR84 (ENSPSMG00000016926) #28 ZNF385A (ENSPSMG00000016918) #29 ITGA5 (ENSPSMG00000016873) #30 GTSF1 (ENSPSMG00000016801) #32 NCKAP1L (ENSPSMG00000016777) #33 PDE1B (ENSPSMG00000016736) #34 PPP1R1A (ENSPSMG00000016640) #35 ENSPSMG00000016621 Bushbaby MODERN SPECIES 158 SP1 (ENSOGAG00000031759) AMHR2 (ENSOGAG00000028440) PRR13 (ENSOGAG00000001734) #7 MAP3K12 (ENSOGAG00000001739) #9 TARBP2 (ENSOGAG00000001744) #10 ATF7 (ENSOGAG00000001748) #12 ENSOGAG00000003611 #13 CALCOCO1 (ENSOGAG00000003612) #14 HOXC13 (ENSOGAG00000030391) #16 HOXC12 (ENSOGAG00000025383) #17 HOXC11 (ENSOGAG00000029804) #18 HOXC10 (ENSOGAG00000003615) HOXC9 (ENSOGAG00000003616) #19 HOXC8 (ENSOGAG00000003619) #20 HOXC6 (ENSOGAG00000003621) #21 HOXC5 (ENSOGAG00000003622) #22 HOXC4 (ENSOGAG00000033004) ENSOGAG00000003623 #23 CBX5 (ENSOGAG00000013464) #24 ENSOGAG00000029707 ##25 NFE2 (ENSOGAG00000006523) #26 COPZ1 (ENSOGAG00000013468) #27 GPR84 (ENSOGAG00000017224) #28 ZNF385A (ENSOGAG00000009483) #29 ITGA5 (ENSOGAG00000017225) #30 GTSF1 (ENSOGAG00000017227) #32 NCKAP1L (ENSOGAG00000017228) #33 PDE1B (ENSOGAG00000017229) #34 PPP1R1A (ENSOGAG00000017231) #35 TESPA1 (ENSOGAG00000009688) NEUROD4 (ENSOGAG00000009685) Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Glires ANCESTRAL SPECIES 4 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Lagomorpha ANCESTRAL SPECIES 30 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.b.c Pika MODERN SPECIES 753 HOXC13 (ENSOPRG00000006077) #16 HOXC11 (ENSOPRG00000006088) #18 HOXC6 (ENSOPRG00000006093) #21 HOXC5 (ENSOPRG00000006095) #22 HOXC4 (ENSOPRG00000006099) CBX5 (ENSOPRG00000006101) #24 HNRNPA1 (ENSOPRG00000006107) #25 NFE2 (ENSOPRG00000006111) #26 Rodentia ANCESTRAL SPECIES 5 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Rodentia_A ANCESTRAL SPECIES 4 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Sciuridae ANCESTRAL SPECIES 15 ENSGT00940000154129.m #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a.z ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Marmotini ANCESTRAL SPECIES 19 ENSGT00940000154129.m.s #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a.z ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816.f ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Marmotini_b ANCESTRAL SPECIES 11 ENSGT00940000154129.m.s #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a.z ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816.f ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Squirrel MODERN SPECIES 112 PRR13 (ENSSTOG00000003624) #7 ENSSTOG00000003635 #8 MAP3K12 (ENSSTOG00000023587) #9 ENSSTOG00000025374 TARBP2 (ENSSTOG00000003678) #10 NPFF (ENSSTOG00000032315) #11 ATF7 (ENSSTOG00000006788) #12 ATP5MC2 (ENSSTOG00000008217) CALCOCO1 (ENSSTOG00000007150) #14 HOXC12 (ENSSTOG00000019478) #17 HOXC11 (ENSSTOG00000028958) #18 HOXC10 (ENSSTOG00000012545) HOXC9 (ENSSTOG00000012548) #19 HOXC8 (ENSSTOG00000012551) #20 HOXC6 (ENSSTOG00000016337) #21 HOXC5 (ENSSTOG00000016336) #22 HOXC4 (ENSSTOG00000020156) SMUG1 (ENSSTOG00000004542) #23 CBX5 (ENSSTOG00000014668) #24 ENSSTOG00000006551 ##25 NFE2 (ENSSTOG00000012435) #26 COPZ1 (ENSSTOG00000021313) #27 GPR84 (ENSSTOG00000014678) #28 ZNF385A (ENSSTOG00000023730) #29 ITGA5 (ENSSTOG00000008042) #30 GTSF1 (ENSSTOG00000025170) #32 ENSSTOG00000030158 NCKAP1L (ENSSTOG00000027248) #33 PDE1B (ENSSTOG00000008136) #34 PPP1R1A (ENSSTOG00000008155) #35 Arctic ground squirrel MODERN SPECIES 202 ENSUPAG00010020714 #8 ENSUPAG00010020704 MAP3K12 (ENSUPAG00010020680) #9 TARBP2 (ENSUPAG00010020659) #10 NPFF (ENSUPAG00010020645) #11 ATF7 (ENSUPAG00010020626) #12 ENSUPAG00010020616 CALCOCO1 (ENSUPAG00010020573) #14 HOXC13 (ENSUPAG00010020570) #16 HOXC12 (ENSUPAG00010020565) #17 HOXC11 (ENSUPAG00010020543) #18 HOXC10 (ENSUPAG00010020535) HOXC9 (ENSUPAG00010020530) #19 HOXC8 (ENSUPAG00010020527) #20 HOXC6 (ENSUPAG00010020523) #21 HOXC5 (ENSUPAG00010020519) #22 HOXC4 (ENSUPAG00010020515) SMUG1 (ENSUPAG00010020511) #23 CBX5 (ENSUPAG00010020504) #24 ENSUPAG00010020486 ##25 NFE2 (ENSUPAG00010020483) #26 COPZ1 (ENSUPAG00010020473) #27 ENSUPAG00010020470 ZNF385A (ENSUPAG00010020449) #29 ITGA5 (ENSUPAG00010020413) #30 GTSF1 (ENSUPAG00010020381) #32 ENSUPAG00010020372 NCKAP1L (ENSUPAG00010020355) #33 PDE1B (ENSUPAG00010020332) #34 ENSUPAG00010020311 #35 ENSUPAG00010020301 Alpin marmot MODERN SPECIES 34 PRR13 (ENSMMMG00000002834) #7 ENSMMMG00000002876 #8 MAP3K12 (ENSMMMG00000003252) #9 ENSMMMG00000003318 TARBP2 (ENSMMMG00000003329) #10 NPFF (ENSMMMG00000003352) #11 ATF7 (ENSMMMG00000003376) #12 ATP5MC2 (ENSMMMG00000003392) CALCOCO1 (ENSMMMG00000003404) #14 ENSMMMG00000003492 HOXC12 (ENSMMMG00000003500) #17 HOXC11 (ENSMMMG00000003528) #18 HOXC10 (ENSMMMG00000003541) HOXC8 (ENSMMMG00000003555) #20 HOXC6 (ENSMMMG00000003562) #21 HOXC5 (ENSMMMG00000003567) #22 HOXC4 (ENSMMMG00000003571) SMUG1 (ENSMMMG00000003585) #23 CBX5 (ENSMMMG00000003604) #24 ENSMMMG00000003625 ##25 NFE2 (ENSMMMG00000003708) #26 COPZ1 (ENSMMMG00000003722) #27 ENSMMMG00000003736 ZNF385A (ENSMMMG00000003744) #29 ITGA5 (ENSMMMG00000003779) #30 ENSMMMG00000003844 NCKAP1L (ENSMMMG00000003866) #33 PDE1B (ENSMMMG00000003896) #34 ENSMMMG00000003982 #35 ENSMMMG00000003992 ENSMMMG00000004003 Eurasian red squirrel MODERN SPECIES 14 SP1 (ENSSVLG00005023931) AMHR2 (ENSSVLG00005023965) PRR13 (ENSSVLG00005024006) #7 ENSSVLG00005024125 #8 MAP3K12 (ENSSVLG00005024636) #9 TARBP2 (ENSSVLG00005024730) #10 NPFF (ENSSVLG00005024757) #11 ATF7 (ENSSVLG00005024779) #12 ENSSVLG00005024802 CALCOCO1 (ENSSVLG00005024843) #14 HOXC13 (ENSSVLG00005024880) #16 HOXC10 (ENSSVLG00005024954) HOXC9 (ENSSVLG00005024979) #19 HOXC8 (ENSSVLG00005024998) #20 HOXC6 (ENSSVLG00005025017) #21 HOXC5 (ENSSVLG00005000186) #22 HOXC4 (ENSSVLG00005000207) SMUG1 (ENSSVLG00005000267) #23 CBX5 (ENSSVLG00005000307) #24 ENSSVLG00005000496 #25 NFE2 (ENSSVLG00005000622) #26 COPZ1 (ENSSVLG00005000750) #27 GPR84 (ENSSVLG00005000857) #28 ZNF385A (ENSSVLG00005000920) #29 ITGA5 (ENSSVLG00005001034) #30 GTSF1 (ENSSVLG00005001091) #32 NCKAP1L (ENSSVLG00005001199) #33 ENSSVLG00005001287 PDE1B (ENSSVLG00005001330) #34 PPP1R1A (ENSSVLG00005001371) #35 TESPA1 (ENSSVLG00005001405) Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00520000058554 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00520000058554 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Guinea pig MODERN SPECIES 9 PCBP2 (ENSCPOG00000000967) #8 ENSCPOG00000032672 MAP3K12 (ENSCPOG00000000971) #9 NPFF (ENSCPOG00000032864) #11 TARBP2 (ENSCPOG00000001009) #10 ENSCPOG00000033904 ATF7 (ENSCPOG00000039679) #12 ATP5MC2 (ENSCPOG00000038171) CALCOCO1 (ENSCPOG00000021587) #14 HOXC13 (ENSCPOG00000020390) #16 HOXC12 (ENSCPOG00000026314) #17 HOXC11 (ENSCPOG00000033525) #18 HOXC10 (ENSCPOG00000009442) HOXC8 (ENSCPOG00000039628) #20 HOXC6 (ENSCPOG00000032302) #21 HOXC5 (ENSCPOG00000009447) #22 HOXC4 (ENSCPOG00000035649) SMUG1 (ENSCPOG00000034157) #23 CBX5 (ENSCPOG00000038461) #24 HNRNPA1 (ENSCPOG00000020972) #25 NFE2 (ENSCPOG00000030518) #26 COPZ1 (ENSCPOG00000007740) #27 GPR84 (ENSCPOG00000020750) #28 ZNF385A (ENSCPOG00000023870) #29 ITGA5 (ENSCPOG00000007748) #30 GTSF1 (ENSCPOG00000008743) #32 ENSCPOG00000023851 NCKAP1L (ENSCPOG00000008748) #33 PDE1B (ENSCPOG00000015102) #34 PPP1R1A (ENSCPOG00000015100) #35 TESPA1 (ENSCPOG00000002912) Hystricomorpha_b ANCESTRAL SPECIES 53 ENSGT00940000160885 ENSGT00940000154129.m.y #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.b ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Long-tailed chinchilla MODERN SPECIES 165 ENSCLAG00000011497 ENSCLAG00000012230 #8 MAP3K12 (ENSCLAG00000007958) #9 TARBP2 (ENSCLAG00000009175) #10 NPFF (ENSCLAG00000007501) #11 ATF7 (ENSCLAG00000009615) #12 ENSCLAG00000010492 #13 CALCOCO1 (ENSCLAG00000008505) #14 HOXC13 (ENSCLAG00000012400) #16 HOXC12 (ENSCLAG00000012849) #17 HOXC11 (ENSCLAG00000010432) #18 HOXC10 (ENSCLAG00000010877) HOXC9 (ENSCLAG00000008460) #19 HOXC8 (ENSCLAG00000008936) #20 HOXC6 (ENSCLAG00000009220) #21 HOXC5 (ENSCLAG00000007510) #22 HOXC4 (ENSCLAG00000009713) SMUG1 (ENSCLAG00000009996) #23 CBX5 (ENSCLAG00000014138) #24 ENSCLAG00000011502 ##25 NFE2 (ENSCLAG00000008922) #26 COPZ1 (ENSCLAG00000009623) #27 ENSCLAG00000009971 ZNF385A (ENSCLAG00000012440) #29 ITGA5 (ENSCLAG00000012598) #30 GTSF1 (ENSCLAG00000012811) #32 ENSCLAG00000008579 NCKAP1L (ENSCLAG00000012783) #33 PDE1B (ENSCLAG00000012001) #34 PPP1R1A (ENSCLAG00000008320) #35 TESPA1 (ENSCLAG00000010955) Degu MODERN SPECIES 134 MAP3K12 (ENSODEG00000013787) #9 TARBP2 (ENSODEG00000013413) #10 ENSODEG00000013431 ATF7 (ENSODEG00000014081) #12 ENSODEG00000013371 #13 CALCOCO1 (ENSODEG00000013989) #14 ENSODEG00000020085 HOXC13 (ENSODEG00000013741) #16 HOXC12 (ENSODEG00000013405) #17 HOXC11 (ENSODEG00000013494) #18 HOXC10 (ENSODEG00000012845) HOXC9 (ENSODEG00000013150) #19 HOXC8 (ENSODEG00000014014) #20 HOXC4 (ENSODEG00000013631) HOXC6 (ENSODEG00000014430) #21 HOXC5 (ENSODEG00000014282) #22 SMUG1 (ENSODEG00000014942) #23 ENSODEG00000013220 #24 ENSODEG00000014815 ##25 NFE2 (ENSODEG00000014004) #26 COPZ1 (ENSODEG00000013855) #27 GPR84 (ENSODEG00000020196) #28 ZNF385A (ENSODEG00000013971) #29 ITGA5 (ENSODEG00000014190) #30 GTSF1 (ENSODEG00000014220) #32 ENSODEG00000013228 NCKAP1L (ENSODEG00000015445) #33 PDE1B (ENSODEG00000013509) #34 PPP1R1A (ENSODEG00000013950) #35 ENSODEG00000013533 TESPA1 (ENSODEG00000014898) Naked mole-rat female MODERN SPECIES 8 ENSHGLG00000001776 #8 MAP3K12 (ENSHGLG00000001148) #9 ENSHGLG00000045875 #10 ENSHGLG00000034619 #10 ENSHGLG00000048122 #11 ATF7 (ENSHGLG00000001620) #12 ENSHGLG00000043196 #13 CALCOCO1 (ENSHGLG00000001954) #14 HOXC13 (ENSHGLG00000001849) #16 HOXC12 (ENSHGLG00000002214) #17 HOXC11 (ENSHGLG00000002244) #18 HOXC10 (ENSHGLG00000002263) HOXC9 (ENSHGLG00000002316) #19 HOXC8 (ENSHGLG00000050680) #20 ENSHGLG00000046696 #21 HOXC5 (ENSHGLG00000002550) #22 HOXC4 (ENSHGLG00000002699) ENSHGLG00000041830 #23 CBX5 (ENSHGLG00000046659) #24 ENSHGLG00000003139 NFE2 (ENSHGLG00000045831) #26 COPZ1 (ENSHGLG00000004132) #27 GPR84 (ENSHGLG00000037069) #28 ZNF385A (ENSHGLG00000001612) #29 ITGA5 (ENSHGLG00000002106) #30 ENSHGLG00000002436 #32 ENSHGLG00000002798 NCKAP1L (ENSHGLG00000003165) #33 ENSHGLG00000003015 #34 PPP1R1A (ENSHGLG00000003378) #35 ENSHGLG00000032715 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Myomorpha ANCESTRAL SPECIES 2 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Muroidea ANCESTRAL SPECIES 31 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Upper Galilee mountains blind mole rat MODERN SPECIES 441 Pcbp2 (ENSNGAG00000012054) #8 Map3k12 (ENSNGAG00000017001) #9 ENSNGAG00000017769 #10 Npff (ENSNGAG00000019691) #11 ENSNGAG00000016268 Atf7 (ENSNGAG00000018161) #12 ENSNGAG00000020790 Calcoco1 (ENSNGAG00000022012) #14 Hoxc13 (ENSNGAG00000022328) #16 Hoxc12 (ENSNGAG00000022515) #17 Hoxc11 (ENSNGAG00000022627) #18 Hoxc10 (ENSNGAG00000022718) Hoxc9 (ENSNGAG00000012023) #19 Hoxc8 (ENSNGAG00000012817) #20 Hoxc6 (ENSNGAG00000013313) #21 Hoxc5 (ENSNGAG00000015707) #22 Hoxc4 (ENSNGAG00000016300) Smug1 (ENSNGAG00000019663) #23 Cbx5 (ENSNGAG00000016802) #24 Hnrnpa1 (ENSNGAG00000017304) #25 Nfe2 (ENSNGAG00000018088) #26 Copz1 (ENSNGAG00000000660) #27 ENSNGAG00000004911 #28 Zfp385a (ENSNGAG00000007963) #29 Itga5 (ENSNGAG00000013929) #30 Gtsf1 (ENSNGAG00000014213) #32 Gtsf2 (ENSNGAG00000008752) Nckap1l (ENSNGAG00000011702) #33 Pde1b (ENSNGAG00000020387) #34 Ppp1r1a (ENSNGAG00000023027) #35 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Cricetidae ANCESTRAL SPECIES 10 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455.`b.b ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455.`b.b ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Chinese hamster chok1gshd MODERN SPECIES 1 Map3k12 (ENSCGRG00001012727) #9 Gm10337 (ENSCGRG00001010232) TARBP2 (ENSCGRG00001011856) #10 Npff (ENSCGRG00001012802) #11 ENSCGRG00001015358 Atf7 (ENSCGRG00001016192) #12 ENSCGRG00001017197 Calcoco1 (ENSCGRG00001014119) #14 Hoxc13 (ENSCGRG00001013867) #16 Hoxc12 (ENSCGRG00001014493) #17 Hoxc11 (ENSCGRG00001013516) #18 Hoxc10 (ENSCGRG00001013473) Hoxc9 (ENSCGRG00001013912) #19 Hoxc8 (ENSCGRG00001014315) #20 Hoxc6 (ENSCGRG00001014416) #21 Hoxc5 (ENSCGRG00001012661) #22 Hoxc4 (ENSCGRG00001013095) Smug1 (ENSCGRG00001016146) #23 Cbx5 (ENSCGRG00001019018) #24 Hnrnpa1 (ENSCGRG00001013129) #25 Nfe2 (ENSCGRG00001022465) #26 Copz1 (ENSCGRG00001013501) #27 ENSCGRG00001009425 #28 Zfp385a (ENSCGRG00001015539) #29 Itga5 (ENSCGRG00001017691) #30 Gtsf1 (ENSCGRG00001013814) #32 Gtsf2 (ENSCGRG00001016136) Nckap1l (ENSCGRG00001014386) #33 Pde1b (ENSCGRG00001017137) #34 Ppp1r1a (ENSCGRG00001013456) #35 Glycam1 (ENSCGRG00001016454) Golden Hamster MODERN SPECIES 626 Sp1 (ENSMAUG00000018418) Prr13 (ENSMAUG00000018724) ENSMAUG00000018893 #8 Map3k12 (ENSMAUG00000019237) #9 Tarbp2 (ENSMAUG00000019805) #10 Atf7 (ENSMAUG00000020350) #12 ENSMAUG00000020460 Calcoco1 (ENSMAUG00000013934) #14 Hoxc13 (ENSMAUG00000014990) #16 Hoxc12 (ENSMAUG00000015132) #17 Hoxc11 (ENSMAUG00000015214) #18 Hoxc10 (ENSMAUG00000015971) Hoxc9 (ENSMAUG00000016070) #19 Hoxc8 (ENSMAUG00000016196) #20 Hoxc6 (ENSMAUG00000018788) #21 Hoxc5 (ENSMAUG00000018873) #22 Hoxc4 (ENSMAUG00000018883) Smug1 (ENSMAUG00000018792) #23 Cbx5 (ENSMAUG00000018962) #24 Hnrnpa1 (ENSMAUG00000019184) #25 Nfe2 (ENSMAUG00000020513) #26 ENSMAUG00000020778 #27 ENSMAUG00000010848 #28 Zfp385a (ENSMAUG00000015687) #29 Itga5 (ENSMAUG00000017255) #30 Gtsf1 (ENSMAUG00000018746) #32 ENSMAUG00000017189 Nckap1l (ENSMAUG00000018822) #33 Pde1b (ENSMAUG00000019170) #34 Ppp1r1a (ENSMAUG00000018584) #35 Tpp2 (ENSMAUG00000019359) Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00730000113467 ENSGT00940000154129.m #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455.`b.b ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Prairie vole MODERN SPECIES 2 Prr13 (ENSMOCG00000014216) ENSMOCG00000010409 #8 Map3k12 (ENSMOCG00000015681) #9 Tarbp2 (ENSMOCG00000003691) #10 Npff (ENSMOCG00000018084) #11 Atf7 (ENSMOCG00000014166) #12 Atp5g2 (ENSMOCG00000012641) Calcoco1 (ENSMOCG00000010205) #14 Hoxc13 (ENSMOCG00000001084) #16 Hoxc12 (ENSMOCG00000016790) #17 Hoxc11 (ENSMOCG00000010091) #18 Hoxc10 (ENSMOCG00000009084) Hoxc9 (ENSMOCG00000019623) #19 Hoxc8 (ENSMOCG00000016249) #20 Hoxc6 (ENSMOCG00000018874) #21 Hoxc5 (ENSMOCG00000013422) #22 Hoxc4 (ENSMOCG00000014873) Smug1 (ENSMOCG00000017727) #23 ENSMOCG00000015075 #24 Hnrnpa1 (ENSMOCG00000004275) #25 Nfe2 (ENSMOCG00000019128) #26 Copz1 (ENSMOCG00000018095) #27 ENSMOCG00000011736 #28 Zfp385a (ENSMOCG00000006959) #29 Itga5 (ENSMOCG00000021919) #30 ENSMOCG00000010096 Gtsf1 (ENSMOCG00000018889) #32 Gtsf2 (ENSMOCG00000014770) ENSMOCG00000011883 #33 ENSMOCG00000014544 #33 Pde1b (ENSMOCG00000008136) #34 Northern American deer mouse MODERN SPECIES 12 Prr13 (ENSPEMG00000017327) ENSPEMG00000013236 #8 Map3k12 (ENSPEMG00000000990) #9 Tarbp2 (ENSPEMG00000014285) #10 Npff (ENSPEMG00000029282) #11 Atf7 (ENSPEMG00000016864) #12 ENSPEMG00000017690 Calcoco1 (ENSPEMG00000014813) #14 Hoxc13 (ENSPEMG00000005314) #16 Hoxc12 (ENSPEMG00000013217) #17 Hoxc11 (ENSPEMG00000011561) #18 Hoxc10 (ENSPEMG00000013609) Hoxc9 (ENSPEMG00000025549) #19 Hoxc8 (ENSPEMG00000026440) #20 Hoxc6 (ENSPEMG00000026208) #21 Hoxc5 (ENSPEMG00000026211) #22 Hoxc4 (ENSPEMG00000015515) ENSPEMG00000028406 Smug1 (ENSPEMG00000027645) #23 Cbx5 (ENSPEMG00000015648) #24 Hnrnpa1 (ENSPEMG00000012402) #25 Nfe2 (ENSPEMG00000011564) #26 Copz1 (ENSPEMG00000009405) #27 Gpr84 (ENSPEMG00000000618) Zfp385a (ENSPEMG00000018499) #29 Itga5 (ENSPEMG00000000509) #30 Gtsf1 (ENSPEMG00000009595) #32 ENSPEMG00000010828 Nckap1l (ENSPEMG00000008686) #33 Pde1b (ENSPEMG00000018802) #34 Ppp1r1a (ENSPEMG00000000773) #35 Murinae ANCESTRAL SPECIES 10 ENSGT00940000154129.m #8 ENSGT00520000058554 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Rat MODERN SPECIES 17 Pcbp2 (ENSRNOG00000036852) #8 Map3k12 (ENSRNOG00000015134) #9 Gm10337 (ENSRNOG00000063518) Tarbp2 (ENSRNOG00000042355) #10 Atf7 (ENSRNOG00000015269) #12 Atp5mc2 (ENSRNOG00000015320) Calcoco1 (ENSRNOG00000015447) #14 AABR07058934.1 (ENSRNOG00000016100) Hoxc13 (ENSRNOG00000028679) #16 Hoxc12 (ENSRNOG00000016116) #17 Hoxc11 (ENSRNOG00000016141) #18 Hoxc10 (ENSRNOG00000016149) Hoxc9 (ENSRNOG00000016199) #19 Hoxc8 (ENSRNOG00000028619) #20 Hoxc6 (ENSRNOG00000063956) #21 Hoxc5 (ENSRNOG00000016598) #22 Hoxc4 (ENSRNOG00000016613) Smug1 (ENSRNOG00000036842) #23 Cbx5 (ENSRNOG00000036841) #24 Hnrnpa1 (ENSRNOG00000036839) #25 Nfe2 (ENSRNOG00000036837) #26 AABR07058937.1 (ENSRNOG00000036836) Copz1 (ENSRNOG00000036835) #27 Gpr84 (ENSRNOG00000036834) #28 Zfp385a (ENSRNOG00000036833) #29 Itga5 (ENSRNOG00000057451) #30 Gtsf1 (ENSRNOG00000036831) #32 Gtsf2 (ENSRNOG00000036830) Nckap1l (ENSRNOG00000036829) #33 Pde1b (ENSRNOG00000036828) #34 Ppp1r1a (ENSRNOG00000036827) #35 Mus ANCESTRAL SPECIES 11 ENSGT00940000154129.m #8 ENSGT00520000058554 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000159286.b.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Mus_A ANCESTRAL SPECIES 13 ENSGT00940000154129.m #8 ENSGT00520000058554 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261.e.a #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000159286.b.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Mus_B ANCESTRAL SPECIES 12 ENSGT00940000154129.m #8 ENSGT00520000058554 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261.e.a #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000159286.b.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Mouse MODERN SPECIES 6 Sp1 (ENSMUSG00000001280) Amhr2 (ENSMUSG00000023047) Prr13 (ENSMUSG00000023048) Pcbp2 (ENSMUSG00000056851) #8 Map3k12 (ENSMUSG00000023050) #9 Gm10337 (ENSMUSG00000071586) Tarbp2 (ENSMUSG00000023051) #10 Npff (ENSMUSG00000023052) #11 Atf7 (ENSMUSG00000099083) #12 Atp5g2 (ENSMUSG00000062683) Calcoco1 (ENSMUSG00000023055) #14 Hoxc13 (ENSMUSG00000001655) #16 Hoxc12 (ENSMUSG00000050328) #17 Hoxc11 (ENSMUSG00000001656) #18 Hoxc10 (ENSMUSG00000022484) Hoxc5 (ENSMUSG00000022485) #22 Hoxc9 (ENSMUSG00000036139) #19 Hoxc8 (ENSMUSG00000001657) #20 Hoxc6 (ENSMUSG00000001661) #21 Hoxc4 (ENSMUSG00000075394) Smug1 (ENSMUSG00000036061) #23 Cbx5 (ENSMUSG00000009575) #24 Hnrnpa1 (ENSMUSG00000046434) #25 Nfe2 (ENSMUSG00000058794) #26 Copz1 (ENSMUSG00000060992) #27 Gpr84 (ENSMUSG00000063234) Zfp385a (ENSMUSG00000000552) #29 Itga5 (ENSMUSG00000000555) #30 Gtsf1 (ENSMUSG00000022487) #32 Gtsf2 (ENSMUSG00000053508) Nckap1l (ENSMUSG00000022488) #33 Mus_C ANCESTRAL SPECIES 17 ENSGT00940000154129.m #8 ENSGT00520000058554 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261.e.a #12 ENSGT00940000157455.y ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000159286.b.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 spretus MODERN SPECIES 6 Amhr2 (MGP_SPRETEiJ_G0021244) MGP_SPRETEiJ_G0021245 Pcbp2 (MGP_SPRETEiJ_G0021246) #8 Map3k12 (MGP_SPRETEiJ_G0021247) #9 Gm10337 (MGP_SPRETEiJ_G0021248) Tarbp2 (MGP_SPRETEiJ_G0021249) #10 Npff (MGP_SPRETEiJ_G0021250) #11 MGP_SPRETEiJ_G0021251 #12 MGP_SPRETEiJ_G0021252 #12 MGP_SPRETEiJ_G0021253 Calcoco1 (MGP_SPRETEiJ_G0021254) #14 Hoxc13 (MGP_SPRETEiJ_G0021255) #16 Hoxc12 (MGP_SPRETEiJ_G0021256) #17 Hoxc11 (MGP_SPRETEiJ_G0021257) #18 Hoxc10 (MGP_SPRETEiJ_G0021258) Hoxc5 (MGP_SPRETEiJ_G0021259) #22 Hoxc9 (MGP_SPRETEiJ_G0021260) #19 Hoxc8 (MGP_SPRETEiJ_G0021261) #20 Hoxc6 (MGP_SPRETEiJ_G0021262) #21 Hoxc4 (MGP_SPRETEiJ_G0021263) Smug1 (MGP_SPRETEiJ_G0021264) #23 MGP_SPRETEiJ_G0021265 #24 Hnrnpa1 (MGP_SPRETEiJ_G0021266) #25 Nfe2 (MGP_SPRETEiJ_G0021267) #26 Copz1 (MGP_SPRETEiJ_G0021268) #27 Gpr84 (MGP_SPRETEiJ_G0021269) Zfp385a (MGP_SPRETEiJ_G0021270) #29 Itga5 (MGP_SPRETEiJ_G0021271) #30 Gtsf1 (MGP_SPRETEiJ_G0021272) #32 Gtsf2 (MGP_SPRETEiJ_G0021273) Nckap1l (MGP_SPRETEiJ_G0021274) #33 Steppe mouse MODERN SPECIES 2761 ENSMSIG00000010172 Calcoco1 (ENSMSIG00000010197) #14 ENSMSIG00000010371 ENSMSIG00000010395 ENSMSIG00000010401 Hoxc13 (ENSMSIG00000010407) #16 Hoxc12 (ENSMSIG00000010422) #17 Hoxc11 (ENSMSIG00000010467) #18 Hoxc10 (ENSMSIG00000010480) Hoxc9 (ENSMSIG00000010497) #19 Hoxc8 (ENSMSIG00000010506) #20 Hoxc6 (ENSMSIG00000010510) #21 Hoxc5 (ENSMSIG00000010530) #22 Hoxc4 (ENSMSIG00000010551) ENSMSIG00000010566 Smug1 (ENSMSIG00000010575) #23 Cbx5 (ENSMSIG00000010608) #24 Hnrnpa1 (ENSMSIG00000010644) #25 Nfe2 (ENSMSIG00000010777) #26 Copz1 (ENSMSIG00000010825) #27 Gpr84 (ENSMSIG00000010839) ENSMSIG00000010850 #29 Itga5 (ENSMSIG00000010915) #30 Gtsf1 (ENSMSIG00000010994) #32 Gtsf2 (ENSMSIG00000011099) Nckap1l (ENSMSIG00000011126) #33 Pde1b (ENSMSIG00000011263) #34 Ppp1r1a (ENSMSIG00000011322) #35 Ryukyu mouse MODERN SPECIES 6 Amhr2 (MGP_CAROLIEiJ_G0020351) Prr13 (MGP_CAROLIEiJ_G0020352) Pcbp2 (MGP_CAROLIEiJ_G0020353) #8 MGP_CAROLIEiJ_G0020354 Gm10337 (MGP_CAROLIEiJ_G0020355) Tarbp2 (MGP_CAROLIEiJ_G0020356) #10 Npff (MGP_CAROLIEiJ_G0020357) #11 MGP_CAROLIEiJ_G0020358 #12 MGP_CAROLIEiJ_G0020359 #12 Atp5g2 (MGP_CAROLIEiJ_G0020360) Calcoco1 (MGP_CAROLIEiJ_G0020361) #14 Hoxc13 (MGP_CAROLIEiJ_G0020362) #16 Hoxc12 (MGP_CAROLIEiJ_G0020363) #17 Hoxc11 (MGP_CAROLIEiJ_G0020364) #18 Hoxc10 (MGP_CAROLIEiJ_G0020365) Hoxc5 (MGP_CAROLIEiJ_G0020366) #22 Hoxc9 (MGP_CAROLIEiJ_G0020367) #19 Hoxc8 (MGP_CAROLIEiJ_G0020368) #20 Hoxc6 (MGP_CAROLIEiJ_G0020369) #21 Hoxc4 (MGP_CAROLIEiJ_G0020370) Smug1 (MGP_CAROLIEiJ_G0020371) #23 Cbx5 (MGP_CAROLIEiJ_G0020372) #24 MGP_CAROLIEiJ_G0020373 ##25 Nfe2 (MGP_CAROLIEiJ_G0020374) #26 Copz1 (MGP_CAROLIEiJ_G0020375) #27 Gpr84 (MGP_CAROLIEiJ_G0020376) Zfp385a (MGP_CAROLIEiJ_G0020377) #29 Itga5 (MGP_CAROLIEiJ_G0020378) #30 Gtsf1 (MGP_CAROLIEiJ_G0020379) #32 Gtsf2 (MGP_CAROLIEiJ_G0020380) Nckap1l (MGP_CAROLIEiJ_G0020381) #33 Shrew mouse MODERN SPECIES 8 Amhr2 (MGP_PahariEiJ_G0020350) Prr13 (MGP_PahariEiJ_G0020351) MGP_PahariEiJ_G0020352 #8 Map3k12 (MGP_PahariEiJ_G0020353) #9 Gm10337 (MGP_PahariEiJ_G0020354) Tarbp2 (MGP_PahariEiJ_G0020355) #10 Npff (MGP_PahariEiJ_G0020356) #11 MGP_PahariEiJ_G0020357 #12 MGP_PahariEiJ_G0020358 #12 Atp5g2 (MGP_PahariEiJ_G0020359) Calcoco1 (MGP_PahariEiJ_G0020360) #14 Hoxc13 (MGP_PahariEiJ_G0020361) #16 Hoxc12 (MGP_PahariEiJ_G0020362) #17 Hoxc11 (MGP_PahariEiJ_G0020363) #18 Hoxc10 (MGP_PahariEiJ_G0020364) Hoxc5 (MGP_PahariEiJ_G0020365) #22 Hoxc9 (MGP_PahariEiJ_G0020366) #19 Hoxc8 (MGP_PahariEiJ_G0020367) #20 Hoxc6 (MGP_PahariEiJ_G0020368) #21 Hoxc4 (MGP_PahariEiJ_G0020369) Smug1 (MGP_PahariEiJ_G0020370) #23 Cbx5 (MGP_PahariEiJ_G0020371) #24 MGP_PahariEiJ_G0020372 ##25 Nfe2 (MGP_PahariEiJ_G0020373) #26 Copz1 (MGP_PahariEiJ_G0020374) #27 Gpr84 (MGP_PahariEiJ_G0020375) Zfp385a (MGP_PahariEiJ_G0020376) #29 Itga5 (MGP_PahariEiJ_G0020377) #30 Gtsf1 (MGP_PahariEiJ_G0020378) #32 Gtsf2 (MGP_PahariEiJ_G0020379) Nckap1l (MGP_PahariEiJ_G0020380) #33 Lesser Egyptian jerboa MODERN SPECIES 42 Gm10337 (ENSJJAG00000003834) ENSJJAG00000007198 #10 Npff (ENSJJAG00000010307) #11 ENSJJAG00000012378 Atf7 (ENSJJAG00000014294) #12 Atp5g2 (ENSJJAG00000009417) Calcoco1 (ENSJJAG00000011789) #14 Hoxc13 (ENSJJAG00000023584) #16 Hoxc12 (ENSJJAG00000024305) #17 Hoxc11 (ENSJJAG00000007017) #18 Hoxc10 (ENSJJAG00000011018) Hoxc9 (ENSJJAG00000020953) #19 Hoxc8 (ENSJJAG00000011647) #20 Hoxc4 (ENSJJAG00000017548) Hoxc6 (ENSJJAG00000021603) #21 Hoxc5 (ENSJJAG00000020509) #22 Smug1 (ENSJJAG00000022700) #23 Cbx5 (ENSJJAG00000016164) #24 Hnrnpa1 (ENSJJAG00000024047) #25 Nfe2 (ENSJJAG00000011311) #26 Copz1 (ENSJJAG00000021645) #27 ENSJJAG00000001613 #28 Zfp385a (ENSJJAG00000021761) #29 Itga5 (ENSJJAG00000013501) #30 ENSJJAG00000003323 #32 Gtsf2 (ENSJJAG00000016320) ENSJJAG00000016097 #33 ENSJJAG00000011759 #33 Pde1b (ENSJJAG00000015140) #34 ENSJJAG00000022930 #35 Glycam1 (ENSJJAG00000016549) Kangaroo rat MODERN SPECIES 474 Pcbp2 (ENSDORG00000001384) #8 Map3k12 (ENSDORG00000001389) #9 Tarbp2 (ENSDORG00000001390) #10 Npff (ENSDORG00000027814) #11 Atf7 (ENSDORG00000001395) #12 Atp5g2 (ENSDORG00000002955) Calcoco1 (ENSDORG00000002957) #14 Hoxc13 (ENSDORG00000023942) #16 Hoxc12 (ENSDORG00000026466) #17 Hoxc11 (ENSDORG00000006990) #18 Hoxc10 (ENSDORG00000006992) Hoxc9 (ENSDORG00000028578) #19 Hoxc8 (ENSDORG00000023838) #20 Hoxc4 (ENSDORG00000007001) Hoxc6 (ENSDORG00000027256) #21 Hoxc5 (ENSDORG00000006999) #22 Smug1 (ENSDORG00000024701) #23 Cbx5 (ENSDORG00000010625) #24 ENSDORG00000027821 Nfe2 (ENSDORG00000010629) #26 Copz1 (ENSDORG00000010630) #27 ENSDORG00000010631 #28 Zfp385a (ENSDORG00000027646) #29 Itga5 (ENSDORG00000008261) #30 Gtsf1 (ENSDORG00000003228) #32 Gtsf2 (ENSDORG00000026087) Nckap1l (ENSDORG00000002123) #33 Pde1b (ENSDORG00000002126) #34 Ppp1r1a (ENSDORG00000002128) #35 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Laurasiatheria_a ANCESTRAL SPECIES 6 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Artiodactyla ANCESTRAL SPECIES 6 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Suina ANCESTRAL SPECIES 21 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Pig MODERN SPECIES 13 PRR13 (ENSSSCG00000000273) #7 PCBP2 (ENSSSCG00000000274) #8 MAP3K12 (ENSSSCG00000000275) #9 TARBP2 (ENSSSCG00000000276) #10 NPFF (ENSSSCG00000000277) #11 ATF7 (ENSSSCG00000000278) #12 ATP5MC2 (ENSSSCG00000062561) CALCOCO1 (ENSSSCG00000028481) #14 HOXC13 (ENSSSCG00000000279) #16 HOXC12 (ENSSSCG00000000281) #17 HOXC11 (ENSSSCG00000028104) #18 HOXC10 (ENSSSCG00000022728) HOXC9 (ENSSSCG00000034474) #19 HOXC8 (ENSSSCG00000038644) #20 HOXC6 (ENSSSCG00000030585) #21 HOXC5 (ENSSSCG00000040798) #22 HOXC4 (ENSSSCG00000038993) SMUG1 (ENSSSCG00000024221) #23 CBX5 (ENSSSCG00000039191) #24 HNRNPA1 (ENSSSCG00000000288) #25 NFE2 (ENSSSCG00000000289) #26 COPZ1 (ENSSSCG00000000290) #27 GPR84 (ENSSSCG00000000291) #28 ZNF385A (ENSSSCG00000000292) #29 ITGA5 (ENSSSCG00000000293) #30 GTSF1 (ENSSSCG00000026333) #32 ENSSSCG00000000296 NCKAP1L (ENSSSCG00000000295) #33 PDE1B (ENSSSCG00000000297) #34 PPP1R1A (ENSSSCG00000000298) #35 ENSSSCG00000060462 Chacoan peccary MODERN SPECIES 900 PRR13 (ENSCWAG00000015767) #7 PCBP2 (ENSCWAG00000015488) #8 MAP3K12 (ENSCWAG00000015294) #9 TARBP2 (ENSCWAG00000015198) #10 NPFF (ENSCWAG00000015156) #11 ATF7 (ENSCWAG00000015117) #12 ENSCWAG00000015074 #13 CALCOCO1 (ENSCWAG00000014985) #14 HOXC13 (ENSCWAG00000014937) #16 HOXC12 (ENSCWAG00000014902) #17 HOXC11 (ENSCWAG00000014873) #18 HOXC10 (ENSCWAG00000014844) HOXC9 (ENSCWAG00000014825) #19 HOXC8 (ENSCWAG00000014794) #20 HOXC6 (ENSCWAG00000014747) #21 HOXC5 (ENSCWAG00000014699) #22 HOXC4 (ENSCWAG00000014679) SMUG1 (ENSCWAG00000014659) #23 CBX5 (ENSCWAG00000014634) #24 HNRNPA1 (ENSCWAG00000014510) #25 NFE2 (ENSCWAG00000014469) #26 COPZ1 (ENSCWAG00000014076) #27 GPR84 (ENSCWAG00000014028) #28 ZNF385A (ENSCWAG00000013742) #29 ITGA5 (ENSCWAG00000013591) #30 GTSF1 (ENSCWAG00000013502) #32 ENSCWAG00000013448 NCKAP1L (ENSCWAG00000012912) #33 PDE1B (ENSCWAG00000012376) #34 PPP1R1A (ENSCWAG00000012290) #35 ENSCWAG00000012242 Artiodactyla_a ANCESTRAL SPECIES 5 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Camelidae ANCESTRAL SPECIES 27 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784.y #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT01050000245407 Arabian camel MODERN SPECIES 3 PRR13 (ENSCDRG00005005020) #7 PCBP2 (ENSCDRG00005004874) #8 MAP3K12 (ENSCDRG00005004763) #9 TARBP2 (ENSCDRG00005004705) #10 NPFF (ENSCDRG00005004686) #11 ATF7 (ENSCDRG00005004669) #12 ENSCDRG00005004636 #13 CALCOCO1 (ENSCDRG00005004535) #14 HOXC13 (ENSCDRG00005004494) #16 HOXC12 (ENSCDRG00005004486) #17 HOXC11 (ENSCDRG00005004473) #18 HOXC10 (ENSCDRG00005004457) HOXC9 (ENSCDRG00005004435) #19 HOXC8 (ENSCDRG00005004419) #20 HOXC6 (ENSCDRG00005004401) #21 HOXC5 (ENSCDRG00005004372) #22 HOXC4 (ENSCDRG00005004352) SMUG1 (ENSCDRG00005004335) #23 CBX5 (ENSCDRG00005004307) #24 HNRNPA1L3 (ENSCDRG00005004239) ##25 NFE2 (ENSCDRG00005004200) #26 COPZ1 (ENSCDRG00005003721) #27 GPR84 (ENSCDRG00005003688) #28 ZNF385A (ENSCDRG00005003527) #29 ITGA5 (ENSCDRG00005003372) #30 ENSCDRG00005003272 #32 NCKAP1L (ENSCDRG00005011045) #33 PDE1B (ENSCDRG00005010791) #34 PPP1R1A (ENSCDRG00005010741) #35 ENSCDRG00005010664 ENSCDRG00005010506 Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Cetacea ANCESTRAL SPECIES 8 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000155001.B.h.b.b ENSGT00940000157455.c ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.b #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Odontoceti ANCESTRAL SPECIES 7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155001.B.h.b.b ENSGT00940000155261 #12 ENSGT00940000157455.c ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.b #27 ENSGT00390000004405.a.n.a.b #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Sperm whale MODERN SPECIES 17 PRR13 (ENSPCTG00005009366) #7 PCBP2 (ENSPCTG00005009053) #8 TARBP2 (ENSPCTG00005008878) #10 NPFF (ENSPCTG00005008851) #11 ENSPCTG00005008838 ATF7 (ENSPCTG00005008736) #12 ATP5MC2 (ENSPCTG00005008660) ENSPCTG00005008605 HOXC13 (ENSPCTG00005008577) #16 HOXC12 (ENSPCTG00005008558) #17 HOXC11 (ENSPCTG00005008535) #18 HOXC10 (ENSPCTG00005008506) HOXC9 (ENSPCTG00005008458) #19 HOXC8 (ENSPCTG00005008435) #20 HOXC6 (ENSPCTG00005008398) #21 HOXC5 (ENSPCTG00005008376) #22 HOXC4 (ENSPCTG00005008357) SMUG1 (ENSPCTG00005008338) #23 CBX5 (ENSPCTG00005008312) #24 ENSPCTG00005008298 ENSPCTG00005008279 NCKAP1L (ENSPCTG00005008128) #33 GTSF1 (ENSPCTG00005008094) #32 TESPA1 (ENSPCTG00005008064) NEUROD4 (ENSPCTG00005008051) ENSPCTG00005007746 METTL7B (ENSPCTG00005007697) ITGA7 (ENSPCTG00005007139) BLOC1S1 (ENSPCTG00005007040) RDH5 (ENSPCTG00005007009) CD63 (ENSPCTG00005006963) Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155001.B.h.b.b ENSGT00940000155261 #12 ENSGT00940000157455.c ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.b #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Dolphin MODERN SPECIES 4097 HOXC13 (ENSTTRG00000004546) #16 HOXC12 (ENSTTRG00000004543) #17 HOXC10 (ENSTTRG00000004540) HOXC8 (ENSTTRG00000004538) #20 HOXC6 (ENSTTRG00000004534) #21 HOXC5 (ENSTTRG00000004532) #22 HOXC4 (ENSTTRG00000004529) SMUG1 (ENSTTRG00000004528) #23 CBX5 (ENSTTRG00000004524) #24 ENSTTRG00000004505 ##25 NFE2 (ENSTTRG00000004496) #26 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155001.B.h.b.b ENSGT00940000155261 #12 ENSGT00940000157455.c ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.b #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155001.B.h.b.b ENSGT00940000155261 #12 ENSGT00940000157455.c ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.b #27 ENSGT00390000004405.a.n.a.b #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Narwhal MODERN SPECIES 313 PCBP2 (ENSMMNG00015016994) #8 MAP3K12 (ENSMMNG00015017081) #9 TARBP2 (ENSMMNG00015017195) #10 NPFF (ENSMMNG00015017292) #11 ATF7 (ENSMMNG00015017347) #12 ENSMMNG00015017394 ENSMMNG00015015701 CALCOCO1 (ENSMMNG00015015727) #14 HOXC13 (ENSMMNG00015015786) #16 HOXC12 (ENSMMNG00015015809) #17 HOXC11 (ENSMMNG00015015840) #18 HOXC10 (ENSMMNG00015015855) HOXC9 (ENSMMNG00015015871) #19 HOXC8 (ENSMMNG00015015891) #20 HOXC6 (ENSMMNG00015015925) #21 HOXC5 (ENSMMNG00015015958) #22 HOXC4 (ENSMMNG00015015985) SMUG1 (ENSMMNG00015016010) #23 CBX5 (ENSMMNG00015016030) #24 ENSMMNG00015016099 ##25 NFE2 (ENSMMNG00015016153) #26 ENSMMNG00015016217 #27 GPR84 (ENSMMNG00015016522) #28 ZNF385A (ENSMMNG00015016554) #29 ITGA5 (ENSMMNG00015016612) #30 GTSF1 (ENSMMNG00015016672) #32 ENSMMNG00015016708 NCKAP1L (ENSMMNG00015016772) #33 PDE1B (ENSMMNG00015017024) #34 PPP1R1A (ENSMMNG00015017160) #35 TESPA1 (ENSMMNG00015017202) Beluga whale MODERN SPECIES 39 AMHR2 (ENSDLEG00000003786) PRR13 (ENSDLEG00000003739) #8 MAP3K12 (ENSDLEG00000003715) #9 TARBP2 (ENSDLEG00000003709) #10 NPFF (ENSDLEG00000003697) #11 ENSDLEG00000003693 ATF7 (ENSDLEG00000003680) #12 CALCOCO1 (ENSDLEG00000003663) #14 HOXC13 (ENSDLEG00000003655) #16 HOXC12 (ENSDLEG00000003651) #17 HOXC11 (ENSDLEG00000003644) #18 HOXC10 (ENSDLEG00000006797) HOXC9 (ENSDLEG00000006790) #19 HOXC8 (ENSDLEG00000006786) #20 HOXC6 (ENSDLEG00000006780) #21 HOXC5 (ENSDLEG00000006775) #22 HOXC4 (ENSDLEG00000006769) SMUG1 (ENSDLEG00000006767) #23 CBX5 (ENSDLEG00000006762) #24 NFE2 (ENSDLEG00000006760) #26 ENSDLEG00000006745 #27 GPR84 (ENSDLEG00000006731) #28 ZNF385A (ENSDLEG00000006709) #29 ITGA5 (ENSDLEG00000006678) #30 GTSF1 (ENSDLEG00000006632) #32 ENSDLEG00000006617 NCKAP1L (ENSDLEG00000006570) #33 PDE1B (ENSDLEG00000006557) #34 PPP1R1A (ENSDLEG00000006547) #35 TESPA1 (ENSDLEG00000006536) NEUROD4 (ENSDLEG00000006529) Vaquita MODERN SPECIES 1 PCBP2 (ENSPSNG00000004524) #8 MAP3K12 (ENSPSNG00000004421) #9 TARBP2 (ENSPSNG00000004360) #10 NPFF (ENSPSNG00000004338) #11 ENSPSNG00000004322 ATF7 (ENSPSNG00000004293) #12 ENSPSNG00000004253 CALCOCO1 (ENSPSNG00000004212) #14 HOXC13 (ENSPSNG00000015899) #16 HOXC12 (ENSPSNG00000015844) #17 HOXC11 (ENSPSNG00000015803) #18 HOXC10 (ENSPSNG00000015759) HOXC9 (ENSPSNG00000015714) #19 HOXC8 (ENSPSNG00000015670) #20 HOXC6 (ENSPSNG00000015606) #21 HOXC5 (ENSPSNG00000015554) #22 HOXC4 (ENSPSNG00000015512) SMUG1 (ENSPSNG00000015467) #23 CBX5 (ENSPSNG00000015418) #24 ENSPSNG00000015247 ##25 NFE2 (ENSPSNG00000015179) #26 ENSPSNG00000014954 #27 GPR84 (ENSPSNG00000014897) #28 ZNF385A (ENSPSNG00000014663) #29 ITGA5 (ENSPSNG00000014389) #30 GTSF1 (ENSPSNG00000014259) #32 ENSPSNG00000014143 NCKAP1L (ENSPSNG00000013144) #33 PDE1B (ENSPSNG00000012973) #34 PPP1R1A (ENSPSNG00000012865) #35 TESPA1 (ENSPSNG00000012731) Blue whale MODERN SPECIES 1 MAP3K12 (ENSBMSG00010008766) #9 TARBP2 (ENSBMSG00010008807) #10 NPFF (ENSBMSG00010008841) #11 ATF7 (ENSBMSG00010008868) #12 ENSBMSG00010008895 ENSBMSG00010008905 CALCOCO1 (ENSBMSG00010008941) #14 ENSBMSG00010008971 HOXC13 (ENSBMSG00010008985) #16 HOXC12 (ENSBMSG00010008992) #17 HOXC11 (ENSBMSG00010008997) #18 HOXC10 (ENSBMSG00010009005) HOXC9 (ENSBMSG00010009014) #19 HOXC8 (ENSBMSG00010009022) #20 HOXC6 (ENSBMSG00010009027) #21 HOXC5 (ENSBMSG00010009041) #22 HOXC4 (ENSBMSG00010009056) SMUG1 (ENSBMSG00010009073) #23 CBX5 (ENSBMSG00010009084) #24 ENSBMSG00010009105 ##25 NFE2 (ENSBMSG00010009158) #26 ENSBMSG00010009194 #27 GPR84 (ENSBMSG00010009235) #28 ZNF385A (ENSBMSG00010009271) #29 ITGA5 (ENSBMSG00010009327) #30 ENSBMSG00010009343 #32 ENSBMSG00010009356 NCKAP1L (ENSBMSG00010009378) #33 PDE1B (ENSBMSG00010009464) #34 PPP1R1A (ENSBMSG00010009513) #35 TESPA1 (ENSBMSG00010009522) Pecora ANCESTRAL SPECIES 3 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.cb.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000154940 ENSGT00940000154517.hb ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00970000194877 Yarkand deer MODERN SPECIES 22 MAP3K12 (ENSCHYG00000002884) #9 TARBP2 (ENSCHYG00000002847) #10 NPFF (ENSCHYG00000002830) #11 ATF7 (ENSCHYG00000002814) #12 ENSCHYG00000002802 #13 CALCOCO1 (ENSCHYG00000002756) #14 ENSCHYG00000002740 ENSCHYG00000002730 HOXC13 (ENSCHYG00000002721) #16 HOXC12 (ENSCHYG00000002710) #17 HOXC11 (ENSCHYG00000002704) #18 HOXC10 (ENSCHYG00000002694) HOXC9 (ENSCHYG00000002684) #19 HOXC8 (ENSCHYG00000002673) #20 HOXC6 (ENSCHYG00000002655) #21 HOXC5 (ENSCHYG00000002637) #22 HOXC4 (ENSCHYG00000002631) ENSCHYG00000002622 #23 CBX5 (ENSCHYG00000002608) #24 ENSCHYG00000002483 #25 NFE2 (ENSCHYG00000002451) #26 COPZ1 (ENSCHYG00000002170) #27 GPR84 (ENSCHYG00000002110) #28 ZNF385A (ENSCHYG00000002056) #29 ITGA5 (ENSCHYG00000001914) #30 ENSCHYG00000001877 #32 NCKAP1L (ENSCHYG00000001786) #33 PDE1B (ENSCHYG00000001668) #34 ENSCHYG00000001619 #35 ENSCHYG00000001601 ENSCHYG00000001575 Percora_a ANCESTRAL SPECIES 3 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.cb.a #13 ENSGT00950000183025.b.b #14 ENSGT00940000154940 ENSGT00940000154517.hb ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00970000194877 Bovidae ANCESTRAL SPECIES 3 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.cb.a #13 ENSGT00950000183025.b.b #14 ENSGT00940000154940 ENSGT00940000154517.hb ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00970000194877 Bovinae ANCESTRAL SPECIES 17 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.cb.a.a #13 ENSGT00950000183025.b.b #14 ENSGT00940000154517.hb ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00390000000805.c.b.b.a American bison MODERN SPECIES 3297 PCBP2 (ENSBBBG00000019391) #8 MAP3K12 (ENSBBBG00000019107) #9 TARBP2 (ENSBBBG00000019042) #10 NPFF (ENSBBBG00000019006) #11 ATF7 (ENSBBBG00000018999) #12 ENSBBBG00000004822 #13 CALCOCO1 (ENSBBBG00000004810) #14 ENSBBBG00000018889 HOXC13 (ENSBBBG00000004761) #16 HOXC12 (ENSBBBG00000004755) #17 HOXC11 (ENSBBBG00000004745) #18 HOXC10 (ENSBBBG00000018829) HOXC9 (ENSBBBG00000018824) #19 HOXC8 (ENSBBBG00000004739) #20 HOXC6 (ENSBBBG00000004735) #21 HOXC5 (ENSBBBG00000004731) #22 HOXC4 (ENSBBBG00000004725) ENSBBBG00000018790 #23 CBX5 (ENSBBBG00000004719) #24 HNRNPA1 (ENSBBBG00000004708) #25 NFE2 (ENSBBBG00000007801) #26 COPZ1 (ENSBBBG00000008941) #27 GPR84 (ENSBBBG00000018621) #28 ZNF385A (ENSBBBG00000018617) #29 ITGA5 (ENSBBBG00000004578) #30 ENSBBBG00000018522 #32 NCKAP1L (ENSBBBG00000004554) #33 PDE1B (ENSBBBG00000018455) #34 PPP1R1A (ENSBBBG00000018403) #35 ENSBBBG00000018397 ENSBBBG00000004491 Bos ANCESTRAL SPECIES 2 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.cb.a.a #13 ENSGT00950000183025.b.b #14 ENSGT00940000154517.hb ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00390000000805.c.b.b.a Bos_b ANCESTRAL SPECIES 4 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.cb.a.a #13 ENSGT00950000183025.b.b #14 ENSGT00940000154517.hb ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00390000004405.a.n.b #27 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00390000000805.c.b.b.a Hybrid Bos Indicus MODERN SPECIES 24 MAP3K12 (ENSBIXG00005006369) #9 TARBP2 (ENSBIXG00005014116) #10 NPFF (ENSBIXG00005014073) #11 ATF7 (ENSBIXG00005014058) #12 ENSBIXG00005014027 #13 CALCOCO1 (ENSBIXG00005005927) #14 ENSBIXG00005013795 HOXC13 (ENSBIXG00005001711) #16 HOXC12 (ENSBIXG00005013757) #17 HOXC11 (ENSBIXG00005013716) #18 HOXC10 (ENSBIXG00005013696) HOXC9 (ENSBIXG00005013659) #19 HOXC8 (ENSBIXG00005013635) #20 HOXC6 (ENSBIXG00005013579) #21 HOXC4 (ENSBIXG00005001661) HOXC5 (ENSBIXG00005013541) #22 SMUG1 (ENSBIXG00005013477) #23 CBX5 (ENSBIXG00005013447) #24 HNRNPA1 (ENSBIXG00005013410) #25 NFE2 (ENSBIXG00005013365) #26 COPZ1 (ENSBIXG00005013277) #27 ZNF385A (ENSBIXG00005013048) #29 ITGA5 (ENSBIXG00005012943) #30 GTSF1 (ENSBIXG00005012927) #32 NCKAP1L (ENSBIXG00005001435) #33 PDE1B (ENSBIXG00005012829) #34 PPP1R1A (ENSBIXG00005001412) #35 ENSBIXG00005012746 ENSBIXG00005012642 USP44 (ENSBIXG00005012628) ENSBIXG00005012602 Cow MODERN SPECIES 24 PCBP2 (ENSBTAG00000020757) #8 MAP3K12 (ENSBTAG00000020758) #9 TARBP2 (ENSBTAG00000000435) #10 NPFF (ENSBTAG00000002401) #11 ATF7 (ENSBTAG00000005863) #12 ATP5MC2 (ENSBTAG00000005735) #13 CALCOCO1 (ENSBTAG00000015016) #14 ENSBTAG00000052958 HOXC13 (ENSBTAG00000000923) #16 HOXC12 (ENSBTAG00000000924) #17 HOXC11 (ENSBTAG00000006879) #18 HOXC10 (ENSBTAG00000003278) HOXC9 (ENSBTAG00000005606) #19 HOXC8 (ENSBTAG00000012149) #20 HOXC6 (ENSBTAG00000009238) #21 HOXC5 (ENSBTAG00000009634) #22 HOXC4 (ENSBTAG00000003304) SMUG1 (ENSBTAG00000021974) #23 CBX5 (ENSBTAG00000006246) #24 HNRNPA1 (ENSBTAG00000001553) #25 NFE2 (ENSBTAG00000001562) #26 COPZ1 (ENSBTAG00000005384) #27 GPR84 (ENSBTAG00000015592) ZNF385A (ENSBTAG00000015604) #29 ITGA5 (ENSBTAG00000013745) #30 GTSF1 (ENSBTAG00000018085) #32 NCKAP1L (ENSBTAG00000019686) #33 PDE1B (ENSBTAG00000004337) #34 PPP1R1A (ENSBTAG00000010907) #35 GLYCAM1 (ENSBTAG00000013417) ENSBTAG00000023670 Bos_a ANCESTRAL SPECIES 3 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.cb.a.a #13 ENSGT00950000183025.b.b #14 ENSGT00940000154517.hb ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00390000000805.c.b.b.a Wild yak MODERN SPECIES 1369 ENSBMUG00000021194 HOXC13 (ENSBMUG00000021179) #16 HOXC11 (ENSBMUG00000021125) #18 HOXC10 (ENSBMUG00000021113) HOXC9 (ENSBMUG00000021090) #19 HOXC8 (ENSBMUG00000021076) #20 HOXC6 (ENSBMUG00000021067) #21 HOXC5 (ENSBMUG00000021043) #22 HOXC4 (ENSBMUG00000021035) SMUG1 (ENSBMUG00000021018) #23 CBX5 (ENSBMUG00000020997) #24 HNRNPA1 (ENSBMUG00000020945) #25 NFE2 (ENSBMUG00000020901) #26 COPZ1 (ENSBMUG00000020850) #27 GPR84 (ENSBMUG00000020785) #28 ZNF385A (ENSBMUG00000020775) #29 ITGA5 (ENSBMUG00000020736) #30 GTSF1 (ENSBMUG00000020707) #32 NCKAP1L (ENSBMUG00000020686) #33 PDE1B (ENSBMUG00000020651) #34 ENSBMUG00000020621 #35 ENSBMUG00000020602 ENSBMUG00000020585 Domestic yak MODERN SPECIES 24 PCBP2 (ENSBGRG00000003386) #8 MAP3K12 (ENSBGRG00000003502) #9 TARBP2 (ENSBGRG00000003551) #10 NPFF (ENSBGRG00000003578) #11 ATF7 (ENSBGRG00000003588) #12 ENSBGRG00000003615 CALCOCO1 (ENSBGRG00000003673) #14 ENSBGRG00000003755 HOXC13 (ENSBGRG00000003766) #16 HOXC12 (ENSBGRG00000003794) #17 HOXC9 (ENSBGRG00000003819) #19 HOXC10 (ENSBGRG00000003864) HOXC8 (ENSBGRG00000003899) #20 HOXC6 (ENSBGRG00000003924) #21 HOXC4 (ENSBGRG00000003972) HOXC5 (ENSBGRG00000003993) #22 SMUG1 (ENSBGRG00000004028) #23 CBX5 (ENSBGRG00000004059) #24 HNRNPA1 (ENSBGRG00000004082) #25 NFE2 (ENSBGRG00000004167) #26 ENSBGRG00000004245 ##27 ENSBGRG00000004546 ZNF385A (ENSBGRG00000004564) #29 ITGA5 (ENSBGRG00000004717) #30 GTSF1 (ENSBGRG00000000289) #32 NCKAP1L (ENSBGRG00000000314) #33 PDE1B (ENSBGRG00000000446) #34 ENSBGRG00000000541 #35 ENSBGRG00000000589 ENSBGRG00000000602 ENSBGRG00000000611 Caprinae ANCESTRAL SPECIES ENSGT00730000111608.b.b #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.cb.b.a #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b.i #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n.a.a #27 ENSGT00390000004405.a.n.b #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Goat MODERN SPECIES 24 MAP3K12 (ENSCHIG00000008756) #9 TARBP2 (ENSCHIG00000026017) #10 NPFF (ENSCHIG00000020253) #11 ATF7 (ENSCHIG00000025884) #12 ENSCHIG00000010354 #13 CALCOCO1 (ENSCHIG00000016780) #14 ENSCHIG00000022160 ENSCHIG00000009554 HOXC13 (ENSCHIG00000025201) #16 HOXC12 (ENSCHIG00000007346) #17 HOXC11 (ENSCHIG00000025199) #18 HOXC10 (ENSCHIG00000006808) HOXC9 (ENSCHIG00000015937) #19 HOXC8 (ENSCHIG00000026921) #20 HOXC6 (ENSCHIG00000013275) #21 HOXC5 (ENSCHIG00000006426) #22 HOXC4 (ENSCHIG00000026040) SMUG1 (ENSCHIG00000009918) #23 CBX5 (ENSCHIG00000026108) #24 ENSCHIG00000025214 ##25 NFE2 (ENSCHIG00000003405) #26 COPZ1 (ENSCHIG00000008823) #27 GPR84 (ENSCHIG00000002786) #28 ZNF385A (ENSCHIG00000016468) #29 ITGA5 (ENSCHIG00000014497) #30 ENSCHIG00000012215 #32 NCKAP1L (ENSCHIG00000009799) #33 PDE1B (ENSCHIG00000027138) #34 PPP1R1A (ENSCHIG00000013673) #35 GLYCAM1 (ENSCHIG00000013512) ENSCHIG00000024516 Rambouillet Sheep MODERN SPECIES 19 PRR13 (ENSOARG00020019703) #7 PCBP2 (ENSOARG00020019417) #8 MAP3K12 (ENSOARG00020019014) #9 TARBP2 (ENSOARG00020018838) #10 NPFF (ENSOARG00020018800) #11 ATF7 (ENSOARG00020018598) #12 ATP5MC2 (ENSOARG00020018507) #13 CALCOCO1 (ENSOARG00020018277) #14 HOXC13 (ENSOARG00020018195) #16 HOXC12 (ENSOARG00020018162) #17 HOXC11 (ENSOARG00020018118) #18 HOXC10 (ENSOARG00020018091) HOXC9 (ENSOARG00020018036) #19 Hoxc8 (ENSOARG00020018004) #20 HOXC6 (ENSOARG00020017976) #21 HOXC5 (ENSOARG00020017906) #22 HOXC4 (ENSOARG00020017880) ENSOARG00020017837 #23 CBX5 (ENSOARG00020017769) #24 ENSOARG00020017550 #25 NFE2 (ENSOARG00020017499) #26 COPZ1 (ENSOARG00020017012) #27 ENSOARG00020016959 ZNF385A (ENSOARG00020016620) #29 ITGA5 (ENSOARG00020016394) #30 GTSF1 (ENSOARG00020016299) #32 NCKAP1L (ENSOARG00020016080) #33 PDE1B (ENSOARG00020015560) #34 PPP1R1A (ENSOARG00020015494) #35 ENSOARG00020015432 USP44 (ENSOARG00020015356) Siberian musk deer MODERN SPECIES 320 PCBP2 (ENSMMSG00000004497) #8 MAP3K12 (ENSMMSG00000006599) #9 TARBP2 (ENSMMSG00000006759) #10 NPFF (ENSMMSG00000006851) #11 ATF7 (ENSMMSG00000006891) #12 ENSMMSG00000006941 #13 CALCOCO1 (ENSMMSG00000007007) #14 ENSMMSG00000007150 HOXC13 (ENSMMSG00000007187) #16 HOXC12 (ENSMMSG00000007203) #17 HOXC11 (ENSMMSG00000007220) #18 HOXC10 (ENSMMSG00000007244) HOXC9 (ENSMMSG00000007268) #19 HOXC8 (ENSMMSG00000007287) #20 HOXC6 (ENSMMSG00000007317) #21 HOXC5 (ENSMMSG00000007356) #22 HOXC4 (ENSMMSG00000007376) SMUG1 (ENSMMSG00000007402) #23 CBX5 (ENSMMSG00000007428) #24 HNRNPA1 (ENSMMSG00000007466) #25 NFE2 (ENSMMSG00000007969) #26 ENSMMSG00000008020 #27 GPR84 (ENSMMSG00000008354) #28 ZNF385A (ENSMMSG00000008397) #29 ITGA5 (ENSMMSG00000008546) #30 GTSF1 (ENSMMSG00000008602) #32 NCKAP1L (ENSMMSG00000008664) #33 PDE1B (ENSMMSG00000008755) #34 PPP1R1A (ENSMMSG00000008915) #35 ENSMMSG00000008952 ENSMMSG00000008970 Laurasiatheria_b ANCESTRAL SPECIES 6 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Carnivora ANCESTRAL SPECIES 3 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Felidae ANCESTRAL SPECIES 2 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.v #13 ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784.o.a #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Panthera ANCESTRAL SPECIES ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.v #13 ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784.o.a #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Tiger MODERN SPECIES 160 AMHR2 (ENSPTIG00000018647) PRR13 (ENSPTIG00000019940) #7 ENSPTIG00000020757 #8 MAP3K12 (ENSPTIG00000006349) #9 TARBP2 (ENSPTIG00000007859) #10 NPFF (ENSPTIG00000009027) #11 ATF7 (ENSPTIG00000009129) #12 ENSPTIG00000010097 #13 CALCOCO1 (ENSPTIG00000010683) #14 ENSPTIG00000012759 HOXC11 (ENSPTIG00000012999) #18 HOXC10 (ENSPTIG00000013134) HOXC9 (ENSPTIG00000013688) #19 HOXC8 (ENSPTIG00000013899) #20 HOXC6 (ENSPTIG00000014044) #21 HOXC5 (ENSPTIG00000014190) #22 HOXC4 (ENSPTIG00000014254) SMUG1 (ENSPTIG00000014332) #23 CBX5 (ENSPTIG00000014891) #24 HNRNPA1 (ENSPTIG00000015170) #25 NFE2 (ENSPTIG00000016194) #26 COPZ1 (ENSPTIG00000016765) #27 GPR84 (ENSPTIG00000005688) #28 ZNF385A (ENSPTIG00000018804) #29 ITGA5 (ENSPTIG00000019878) #30 ENSPTIG00000020415 #32 ENSPTIG00000020670 NCKAP1L (ENSPTIG00000020912) #33 PDE1B (ENSPTIG00000000482) #34 PPP1R1A (ENSPTIG00000005620) #35 TESPA1 (ENSPTIG00000005862) Panthera_a ANCESTRAL SPECIES 5 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.v #13 ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784.o.a #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 leopard MODERN SPECIES 77 MAP3K12 (ENSPPRG00000001122) #9 TARBP2 (ENSPPRG00000000189) #10 NPFF (ENSPPRG00000023107) #11 ATF7 (ENSPPRG00000023291) #12 ENSPPRG00000023773 #13 CALCOCO1 (ENSPPRG00000024719) #14 ENSPPRG00000019762 ENSPPRG00000018754 #16 ENSPPRG00000017468 #16 HOXC12 (ENSPPRG00000017257) #17 HOXC11 (ENSPPRG00000016716) #18 HOXC10 (ENSPPRG00000016146) HOXC9 (ENSPPRG00000015964) #19 HOXC8 (ENSPPRG00000015585) #20 ENSPPRG00000015418 #21 HOXC5 (ENSPPRG00000015137) #22 HOXC4 (ENSPPRG00000015044) SMUG1 (ENSPPRG00000013822) #23 CBX5 (ENSPPRG00000013006) #24 HNRNPA1 (ENSPPRG00000012587) #25 NFE2 (ENSPPRG00000010846) #26 COPZ1 (ENSPPRG00000009421) #27 GPR84 (ENSPPRG00000015240) #28 ZNF385A (ENSPPRG00000007378) #29 ITGA5 (ENSPPRG00000006266) #30 ENSPPRG00000004344 #32 ENSPPRG00000004157 NCKAP1L (ENSPPRG00000004044) #33 PDE1B (ENSPPRG00000003378) #34 PPP1R1A (ENSPPRG00000003234) #35 TESPA1 (ENSPPRG00000003150) lion MODERN SPECIES 7 PCBP2 (ENSPLOG00000004549) #8 MAP3K12 (ENSPLOG00000004592) #9 TARBP2 (ENSPLOG00000004637) #10 NPFF (ENSPLOG00000004647) #11 ATF7 (ENSPLOG00000004653) #12 ENSPLOG00000004664 #13 CALCOCO1 (ENSPLOG00000004698) #14 ENSPLOG00000004763 HOXC13 (ENSPLOG00000004788) #16 HOXC12 (ENSPLOG00000004799) #17 HOXC11 (ENSPLOG00000004812) #18 HOXC10 (ENSPLOG00000004820) HOXC9 (ENSPLOG00000004844) #19 HOXC8 (ENSPLOG00000004851) #20 HOXC6 (ENSPLOG00000004865) #21 HOXC5 (ENSPLOG00000004882) #22 HOXC4 (ENSPLOG00000004898) SMUG1 (ENSPLOG00000004904) #23 CBX5 (ENSPLOG00000004916) #24 HNRNPA1 (ENSPLOG00000004985) #25 NFE2 (ENSPLOG00000005068) #26 COPZ1 (ENSPLOG00000005158) #27 GPR84 (ENSPLOG00000005296) #28 ZNF385A (ENSPLOG00000005319) #29 ITGA5 (ENSPLOG00000005387) #30 GTSF1 (ENSPLOG00000005457) #32 ENSPLOG00000005478 NCKAP1L (ENSPLOG00000005508) #33 PDE1B (ENSPLOG00000005622) #34 PPP1R1A (ENSPLOG00000005705) #35 ENSPLOG00000005724 Cat MODERN SPECIES 238 AMHR2 (ENSFCAG00000005894) PCBP2 (ENSFCAG00000023348) #8 PRR13 (ENSFCAG00000041253) #7 MAP3K12 (ENSFCAG00000012780) #9 TARBP2 (ENSFCAG00000007757) #10 ATF7 (ENSFCAG00000012783) #12 ATP5MC2 (ENSFCAG00000001502) #13 CALCOCO1 (ENSFCAG00000012712) #14 HOXC13 (ENSFCAG00000044858) #16 HOXC12 (ENSFCAG00000023389) #17 HOXC11 (ENSFCAG00000038352) #18 HOXC10 (ENSFCAG00000011202) HOXC9 (ENSFCAG00000031037) #19 HOXC8 (ENSFCAG00000004769) #20 HOXC6 (ENSFCAG00000032656) #21 HOXC5 (ENSFCAG00000032832) #22 HOXC4 (ENSFCAG00000037382) SMUG1 (ENSFCAG00000010148) #23 CBX5 (ENSFCAG00000041615) #24 HNRNPA1 (ENSFCAG00000010150) #25 NFE2 (ENSFCAG00000025666) #26 COPZ1 (ENSFCAG00000032605) #27 GPR84 (ENSFCAG00000010153) #28 ZNF385A (ENSFCAG00000010154) #29 ITGA5 (ENSFCAG00000010155) #30 ENSFCAG00000010156 #32 NCKAP1L (ENSFCAG00000010157) #33 ENSFCAG00000031316 PDE1B (ENSFCAG00000010158) #34 PPP1R1A (ENSFCAG00000010159) #35 ENSFCAG00000053522 Caniformia ANCESTRAL SPECIES 19 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Canidae ANCESTRAL SPECIES 8 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Canis_lupus ANCESTRAL SPECIES 14 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00860000136117 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Dingo MODERN SPECIES 202 AMHR2 (ENSCAFG00020021015) PCBP2 (ENSCAFG00020020983) #8 MAP3K12 (ENSCAFG00020020750) #9 TARBP2 (ENSCAFG00020020735) #10 ATF7 (ENSCAFG00020020729) #12 ENSCAFG00020020717 #13 CALCOCO1 (ENSCAFG00020020705) #14 ENSCAFG00020020699 HOXC13 (ENSCAFG00020020697) #16 HOXC12 (ENSCAFG00020020691) #17 HOXC11 (ENSCAFG00020020666) #18 HOXC10 (ENSCAFG00020020660) HOXC9 (ENSCAFG00020020653) #19 HOXC8 (ENSCAFG00020020648) #20 HOXC6 (ENSCAFG00020020642) #21 HOXC5 (ENSCAFG00020020637) #22 HOXC4 (ENSCAFG00020020631) SMUG1 (ENSCAFG00020020617) #23 ENSCAFG00020020614 CBX5 (ENSCAFG00020020609) #24 NFE2 (ENSCAFG00020020604) #26 ENSCAFG00020020600 COPZ1 (ENSCAFG00020020592) #27 GPR84 (ENSCAFG00020020589) #28 ZNF385A (ENSCAFG00020020566) #29 ITGA5 (ENSCAFG00020020389) #30 GTSF1 (ENSCAFG00020020373) #32 ENSCAFG00020020371 NCKAP1L (ENSCAFG00020018536) #33 PDE1B (ENSCAFG00020018452) #34 PPP1R1A (ENSCAFG00020018449) #35 Dog MODERN SPECIES 19 PRR13 (ENSCAFG00845019602) #7 ENSCAFG00845019393 #8 MAP3K12 (ENSCAFG00845019204) #9 TARBP2 (ENSCAFG00845019060) #10 ATF7 (ENSCAFG00845018892) #12 ENSCAFG00845018811 CALCOCO1 (ENSCAFG00845018567) #14 ENSCAFG00845018482 HOXC13 (ENSCAFG00845018448) #16 HOXC12 (ENSCAFG00845018411) #17 HOXC11 (ENSCAFG00845018373) #18 HOXC10 (ENSCAFG00845018342) ENSCAFG00845018282 #19 HOXC8 (ENSCAFG00845018237) #20 HOXC6 (ENSCAFG00845018203) #21 HOXC5 (ENSCAFG00845018144) #22 HOXC4 (ENSCAFG00845018094) ENSCAFG00845017961 #23 CBX5 (ENSCAFG00845017851) #24 HNRNPA1 (ENSCAFG00845017656) #25 NFE2 (ENSCAFG00845017550) #26 ENSCAFG00845017498 COPZ1 (ENSCAFG00845017389) #27 GPR84 (ENSCAFG00845017349) #28 ZNF385A (ENSCAFG00845017040) #29 ITGA5 (ENSCAFG00845016791) #30 ENSCAFG00845016667 #32 ENSCAFG00845016576 NCKAP1L (ENSCAFG00845016220) #33 PDE1B (ENSCAFG00845015903) #34 PPP1R1A (ENSCAFG00845015732) #35 Red fox MODERN SPECIES 32 AMHR2 (ENSVVUG00000028127) PCBP2 (ENSVVUG00000028129) #8 MAP3K12 (ENSVVUG00000028137) #9 TARBP2 (ENSVVUG00000028150) #10 ATF7 (ENSVVUG00000028157) #12 ENSVVUG00000028163 CALCOCO1 (ENSVVUG00000028166) #14 ENSVVUG00000028173 HOXC13 (ENSVVUG00000028177) #16 ENSVVUG00000028182 #17 HOXC11 (ENSVVUG00000028193) #18 HOXC10 (ENSVVUG00000028196) HOXC9 (ENSVVUG00000028202) #19 HOXC8 (ENSVVUG00000028203) #20 HOXC6 (ENSVVUG00000028209) #21 HOXC5 (ENSVVUG00000028206) #22 HOXC4 (ENSVVUG00000028205) Caniformia_b ANCESTRAL SPECIES 17 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Mustelinae ANCESTRAL SPECIES 33 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455.b.e ENSGT00950000183025.b.b #14 ENSGT00940000154651.j.b ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.h.b ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT01100000263512.a.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784.q #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Ferret MODERN SPECIES 362 PRR13 (ENSMPUG00000005995) #7 PCBP2 (ENSMPUG00000005980) #8 MAP3K12 (ENSMPUG00000005953) #9 TARBP2 (ENSMPUG00000005944) #10 ATF7 (ENSMPUG00000005932) #12 ENSMPUG00000005927 CALCOCO1 (ENSMPUG00000005917) #14 ENSMPUG00000005897 HOXC13 (ENSMPUG00000005890) #16 HOXC12 (ENSMPUG00000005886) #17 HOXC11 (ENSMPUG00000005876) #18 HOXC10 (ENSMPUG00000005868) HOXC9 (ENSMPUG00000005862) #19 HOXC8 (ENSMPUG00000005854) #20 HOXC6 (ENSMPUG00000005848) #21 HOXC5 (ENSMPUG00000005841) #22 HOXC4 (ENSMPUG00000005838) SMUG1 (ENSMPUG00000005833) #23 CBX5 (ENSMPUG00000005824) #24 ENSMPUG00000005735 ##25 NFE2 (ENSMPUG00000005728) #26 COPZ1 (ENSMPUG00000005721) #27 ENSMPUG00000018969 ZNF385A (ENSMPUG00000005716) #29 ITGA5 (ENSMPUG00000005706) #30 ENSMPUG00000005669 #32 ENSMPUG00000005664 NCKAP1L (ENSMPUG00000005637) #33 PDE1B (ENSMPUG00000005623) #34 PPP1R1A (ENSMPUG00000005566) #35 ENSMPUG00000005557 American mink MODERN SPECIES 304 AMHR2 (ENSNVIG00000001357) PRR13 (ENSNVIG00000001375) #7 ENSNVIG00000001409 #8 MAP3K12 (ENSNVIG00000001854) #9 TARBP2 (ENSNVIG00000001900) #10 NPFF (ENSNVIG00000001931) #11 ATF7 (ENSNVIG00000001946) #12 ENSNVIG00000002061 CALCOCO1 (ENSNVIG00000002092) #14 HOXC13 (ENSNVIG00000002210) #16 HOXC12 (ENSNVIG00000002217) #17 HOXC11 (ENSNVIG00000002270) #18 HXC10 (ENSNVIG00000002291) HOXC6 (ENSNVIG00000002310) #21 HOXC8 (ENSNVIG00000002365) #20 HOXC5 (ENSNVIG00000002379) #22 HOXC4 (ENSNVIG00000002392) SMUG1 (ENSNVIG00000002426) #23 CBX5 (ENSNVIG00000002437) #24 NFE2 (ENSNVIG00000002464) #26 COPZ1 (ENSNVIG00000002494) #27 GPR84 (ENSNVIG00000002653) ENSNVIG00000002661 #29 ITGA5 (ENSNVIG00000002759) #30 ENSNVIG00000002815 #32 ENSNVIG00000002839 NCKAP1L (ENSNVIG00000002850) #33 PDE1B (ENSNVIG00000002928) #34 PPP1R1A (ENSNVIG00000003014) #35 Ursidae ANCESTRAL SPECIES 36 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.y.a #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Ursus ANCESTRAL SPECIES 208 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.b.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 American black bear DUPLICATION American black bear MODERN SPECIES 3197 ENSUAMG00000026317 #21 ENSUAMG00000026318 #22 ENSUAMG00000026319 #22 HOXC4 (ENSUAMG00000026320) American black bear MODERN SPECIES 3197 ENSUAMG00000026317 #21 ENSUAMG00000026318 #22 ENSUAMG00000026319 #22 HOXC4 (ENSUAMG00000026320) Polar bear MODERN SPECIES 262 SP7 (ENSUMAG00000010381) SP1 (ENSUMAG00000010388) AMHR2 (ENSUMAG00000010400) PRR13 (ENSUMAG00000010429) #7 PCBP2 (ENSUMAG00000010437) #8 MAP3K12 (ENSUMAG00000010453) #9 TARBP2 (ENSUMAG00000010461) #10 NPFF (ENSUMAG00000010468) #11 ATF7 (ENSUMAG00000010473) #12 ENSUMAG00000010480 #13 CALCOCO1 (ENSUMAG00000010484) #14 HOXC10 (ENSUMAG00000010505) ENSUMAG00000010512 HOXC8 (ENSUMAG00000010514) #20 HOXC6 (ENSUMAG00000010520) #21 HOXC5 (ENSUMAG00000010526) #22 SMUG1 (ENSUMAG00000010531) #23 CBX5 (ENSUMAG00000010538) #24 ENSUMAG00000010541 ##25 NFE2 (ENSUMAG00000010542) #26 COPZ1 (ENSUMAG00000010544) #27 GPR84 (ENSUMAG00000010547) #28 ZNF385A (ENSUMAG00000010548) #29 ITGA5 (ENSUMAG00000010654) #30 GTSF1 (ENSUMAG00000011279) #32 ENSUMAG00000011281 NCKAP1L (ENSUMAG00000011282) #33 PDE1B (ENSUMAG00000011288) #34 PPP1R1A (ENSUMAG00000011296) #35 ENSUMAG00000011298 TESPA1 (ENSUMAG00000011308) Giant Panda MODERN SPECIES 7 ENSAMEG00000026467 PCBP2 (ENSAMEG00000012520) #8 MAP3K12 (ENSAMEG00000012574) #9 TARBP2 (ENSAMEG00000012601) #10 NPFF (ENSAMEG00000012622) #11 ATF7 (ENSAMEG00000012625) #12 ENSAMEG00000000619 #13 CALCOCO1 (ENSAMEG00000000633) #14 HOXC13 (ENSAMEG00000029355) #16 HOXC12 (ENSAMEG00000026141) #17 HOXC11 (ENSAMEG00000000668) #18 HOXC10 (ENSAMEG00000000673) HOXC9 (ENSAMEG00000029065) #19 HOXC8 (ENSAMEG00000029788) #20 HOXC6 (ENSAMEG00000000686) #21 HOXC5 (ENSAMEG00000000691) #22 HOXC4 (ENSAMEG00000026128) SMUG1 (ENSAMEG00000000705) #23 CBX5 (ENSAMEG00000000707) #24 HNRNPA1 (ENSAMEG00000000717) #25 NFE2 (ENSAMEG00000000747) #26 COPZ1 (ENSAMEG00000025997) #27 ENSAMEG00000019330 ZNF385A (ENSAMEG00000000767) #29 ITGA5 (ENSAMEG00000000779) #30 GTSF1 (ENSAMEG00000000939) #32 ENSAMEG00000000958 NCKAP1L (ENSAMEG00000000960) #33 PDE1B (ENSAMEG00000001050) #34 PPP1R1A (ENSAMEG00000001096) #35 ENSAMEG00000001106 Laurasiatheria_c ANCESTRAL SPECIES 5 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Equus ANCESTRAL SPECIES 16 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 Horse MODERN SPECIES 27 PRR13 (ENSECAG00000042810) #7 ENSECAG00000022389 #8 MAP3K12 (ENSECAG00000010837) #9 TARBP2 (ENSECAG00000011695) #10 NPFF (ENSECAG00000021139) #11 ATF7 (ENSECAG00000021521) #12 ATP5MC2 (ENSECAG00000023021) #13 CALCOCO1 (ENSECAG00000024023) #14 HOXC13 (ENSECAG00000024867) #16 HOXC11 (ENSECAG00000024900) #18 HOXC12 (ENSECAG00000024893) #17 HOXC10 (ENSECAG00000034365) HOXC9 (ENSECAG00000044561) #19 HOXC8 (ENSECAG00000000932) #20 HOXC6 (ENSECAG00000003682) HOXC5 (ENSECAG00000004151) #22 SMUG1 (ENSECAG00000007776) #23 CBX5 (ENSECAG00000008101) #24 NFE2 (ENSECAG00000024536) #26 HNRNPA1 (ENSECAG00000008676) #25 COPZ1 (ENSECAG00000024555) #27 GPR84 (ENSECAG00000000949) ZNF385A (ENSECAG00000024939) #29 ITGA5 (ENSECAG00000024979) #30 NCKAP1L (ENSECAG00000014435) #33 GTSF1 (ENSECAG00000013618) #32 ENSECAG00000049601 PDE1B (ENSECAG00000048352) #34 PPP1R1A (ENSECAG00000007612) #35 ENSECAG00000053965 ENSECAG00000051815 Donkey MODERN SPECIES 14 PRR13 (ENSEASG00005030826) #7 ENSEASG00005010021 #8 MAP3K12 (ENSEASG00005010026) #9 TARBP2 (ENSEASG00005010030) #10 ENSEASG00005033454 #11 ATF7 (ENSEASG00005010041) #12 ENSEASG00005033090 #13 CALCOCO1 (ENSEASG00005010125) #14 HOXC13 (ENSEASG00005032367) #16 HOXC12 (ENSEASG00005010128) #17 HOXC11 (ENSEASG00005010141) #18 HOXC10 (ENSEASG00005010143) HOXC9 (ENSEASG00005010148) #19 HOXC8 (ENSEASG00005024216) #20 ENSEASG00005010153 #21 HOXC5 (ENSEASG00005010157) #22 HOXC4 (ENSEASG00005010161) SMUG1 (ENSEASG00005010163) #23 CBX5 (ENSEASG00005010165) #24 HNRNPA1 (ENSEASG00005010182) #25 NFE2 (ENSEASG00005036003) #26 COPZ1 (ENSEASG00005010233) #27 GPR84 (ENSEASG00005010241) #28 ZNF385A (ENSEASG00005010244) #29 ITGA5 (ENSEASG00005010252) #30 GTSF1 (ENSEASG00005010260) #32 ENSEASG00005010262 NCKAP1L (ENSEASG00005010266) #33 PDE1B (ENSEASG00005010274) #34 ENSEASG00005038614 #35 ENSEASG00005030245 Chiroptera ANCESTRAL SPECIES 4 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00940000160763 Megabat MODERN SPECIES 4371 HOXC8 (ENSPVAG00000014725) #20 HOXC6 (ENSPVAG00000014724) #21 HOXC5 (ENSPVAG00000014723) #22 HOXC4 (ENSPVAG00000014722) Microchiroptera ANCESTRAL SPECIES 2 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a.n #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00520000060242 ENSGT00940000160763 Microbat MODERN SPECIES 1097 AMHR2 (ENSMLUG00000017305) PCBP2 (ENSMLUG00000009971) #8 MAP3K12 (ENSMLUG00000010002) #9 TARBP2 (ENSMLUG00000010035) #10 NPFF (ENSMLUG00000026248) #11 ATF7 (ENSMLUG00000007697) #12 ENSMLUG00000011860 #13 CALCOCO1 (ENSMLUG00000011866) #14 HOXC13 (ENSMLUG00000015050) #16 HOXC12 (ENSMLUG00000026984) #17 HOXC11 (ENSMLUG00000000470) #18 HOXC10 (ENSMLUG00000000482) HOXC9 (ENSMLUG00000000483) #19 HOXC8 (ENSMLUG00000003097) #20 HOXC6 (ENSMLUG00000000485) #21 HOXC5 (ENSMLUG00000000488) #22 HOXC4 (ENSMLUG00000017706) SMUG1 (ENSMLUG00000000491) #23 CBX5 (ENSMLUG00000000652) #24 ENSMLUG00000000648 ##25 NFE2 (ENSMLUG00000011437) #26 COPZ1 (ENSMLUG00000015971) #27 GPR84 (ENSMLUG00000012933) #28 ZNF385A (ENSMLUG00000012937) #29 ITGA5 (ENSMLUG00000012946) #30 ENSMLUG00000012961 #32 ENSMLUG00000002432 ENSMLUG00000024563 NCKAP1L (ENSMLUG00000012968) #33 PDE1B (ENSMLUG00000012983) #34 PPP1R1A (ENSMLUG00000012998) #35 Greater horseshoe bat MODERN SPECIES 1 PRR13 (ENSRFEG00010002417) #7 PCBP2 (ENSRFEG00010002468) #8 MAP3K12 (ENSRFEG00010002570) #9 TARBP2 (ENSRFEG00010002628) #10 NPFF (ENSRFEG00010002678) #11 ATF7 (ENSRFEG00010002698) #12 ENSRFEG00010002728 #13 CALCOCO1 (ENSRFEG00010002780) #14 HOXC13 (ENSRFEG00010002899) #16 HOXC12 (ENSRFEG00010002916) #17 HOXC11 (ENSRFEG00010002928) #18 HOXC10 (ENSRFEG00010002942) HOXC9 (ENSRFEG00010002965) #19 HOXC8 (ENSRFEG00010002977) #20 HOXC6 (ENSRFEG00010003005) #21 HOXC5 (ENSRFEG00010003028) #22 HOXC4 (ENSRFEG00010003046) SMUG1 (ENSRFEG00010003070) #23 CBX5 (ENSRFEG00010003088) #24 ENSRFEG00010003146 #25 NFE2 (ENSRFEG00010003234) #26 COPZ1 (ENSRFEG00010003353) #27 ENSRFEG00010003458 ZNF385A (ENSRFEG00010003487) #29 ITGA5 (ENSRFEG00010003562) #30 GTSF1 (ENSRFEG00010003655) #32 NCKAP1L (ENSRFEG00010003799) #33 PDE1B (ENSRFEG00010003985) #34 PPP1R1A (ENSRFEG00010004029) #35 ENSRFEG00010004045 ENSRFEG00010004059 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000161023 #22 Hedgehog MODERN SPECIES 15435 HOXC5 (ENSEEUG00000012980) #22 Atlantogenata ANCESTRAL SPECIES 33 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000167802 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Xenarthra ANCESTRAL SPECIES 47 ENSGT00940000157804 ENSGT00940000160885 ENSGT00730000111608 #7 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 Armadillo MODERN SPECIES 2448 SP1 (ENSDNOG00000017346) AMHR2 (ENSDNOG00000016742) PRR13 (ENSDNOG00000034392) #7 ENSDNOG00000035361 #8 ENSDNOG00000008709 #9 TARBP2 (ENSDNOG00000002144) #10 ATF7 (ENSDNOG00000008735) #12 ATP5MC2 (ENSDNOG00000009429) CALCOCO1 (ENSDNOG00000032227) #14 HOXC13 (ENSDNOG00000048301) #16 HOXC12 (ENSDNOG00000033631) #17 HOXC11 (ENSDNOG00000017503) #18 HOXC10 (ENSDNOG00000017505) HOXC9 (ENSDNOG00000035825) #19 HOXC8 (ENSDNOG00000034735) #20 HOXC5 (ENSDNOG00000009604) #22 HOXC4 (ENSDNOG00000046396) SMUG1 (ENSDNOG00000037933) #23 Afrotheria ANCESTRAL SPECIES 40 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.b.b #25 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Tenrec MODERN SPECIES 18004 HOXC6 (ENSETEG00000015765) #21 HOXC5 (ENSETEG00000015763) #22 Afrotheria_a ANCESTRAL SPECIES 40 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00520000058554 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157455 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123.g.a.a.a ##25 ENSGT00950000183123.g.a.a.b ##25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Elephant MODERN SPECIES 196 ENSLAFG00000013184 ENSLAFG00000013187 #8 MAP3K12 (ENSLAFG00000002616) #9 ENSLAFG00000029818 TARBP2 (ENSLAFG00000002620) #10 ATF7 (ENSLAFG00000002626) #12 ATP5MC2 (ENSLAFG00000015528) CALCOCO1 (ENSLAFG00000015535) #14 HOXC13 (ENSLAFG00000030195) #16 HOXC12 (ENSLAFG00000024750) #17 HOXC11 (ENSLAFG00000018133) #18 HOXC10 (ENSLAFG00000018137) HOXC9 (ENSLAFG00000002366) #19 HOXC8 (ENSLAFG00000018140) #20 HOXC6 (ENSLAFG00000001117) #21 HOXC5 (ENSLAFG00000002367) #22 HOXC4 (ENSLAFG00000030151) SMUG1 (ENSLAFG00000002187) #23 CBX5 (ENSLAFG00000001576) #24 ENSLAFG00000029587 ##25 NFE2 (ENSLAFG00000001581) #26 COPZ1 (ENSLAFG00000001582) #27 GPR84 (ENSLAFG00000027132) #28 ZNF385A (ENSLAFG00000001583) #29 ITGA5 (ENSLAFG00000013847) #30 GTSF1 (ENSLAFG00000016318) #32 NCKAP1L (ENSLAFG00000011071) #33 PDE1B (ENSLAFG00000027709) #34 PPP1R1A (ENSLAFG00000009233) #35 TESPA1 (ENSLAFG00000014383) NEUROD4 (ENSLAFG00000029446) Hyrax MODERN SPECIES 1803 HOXC11 (ENSPCAG00000010929) #18 HOXC10 (ENSPCAG00000010955) HOXC9 (ENSPCAG00000010970) #19 HOXC6 (ENSPCAG00000010993) #21 HOXC5 (ENSPCAG00000011018) #22 HOXC4 (ENSPCAG00000011039) Marsupialia ANCESTRAL SPECIES 24 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000158801 #24 ENSGT00950000183123.g.a #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 Marsupialia_b ANCESTRAL SPECIES 12 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000166417 ENSGT00940000158801 #24 ENSGT00950000183123.g.a #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Diprotodontia ANCESTRAL SPECIES 29 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.f #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000166417 ENSGT00940000158801 #24 ENSGT00950000183123.g.a #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Diprotodontia_a ANCESTRAL SPECIES 29 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b.f #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000166417 ENSGT00940000158801 #24 ENSGT00950000183123.g.a #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671 #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000163816 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 koala MODERN SPECIES 165 AMHR2 (ENSPCIG00000006651) PCBP2 (ENSPCIG00000006658) #8 MAP3K12 (ENSPCIG00000006667) #9 TARBP2 (ENSPCIG00000006672) #10 NPFF (ENSPCIG00000006674) #11 ATF7 (ENSPCIG00000006677) #12 ENSPCIG00000006683 #13 CALCOCO1 (ENSPCIG00000006685) #14 HOXC13 (ENSPCIG00000006688) #16 HOXC12 (ENSPCIG00000006689) #17 HOXC11 (ENSPCIG00000006693) #18 HOXC10 (ENSPCIG00000006695) HOXC9 (ENSPCIG00000037360) #19 HOXC8 (ENSPCIG00000035099) #20 HOXC6 (ENSPCIG00000034086) #21 HOXC5 (ENSPCIG00000006705) #22 HOXC4 (ENSPCIG00000006707) ENSPCIG00000006713 CBX5 (ENSPCIG00000006714) #24 ENSPCIG00000006715 #25 NFE2 (ENSPCIG00000035589) #26 ENSPCIG00000006721 #27 GPR84 (ENSPCIG00000006723) #28 ZNF385A (ENSPCIG00000006724) #29 ITGA5 (ENSPCIG00000006725) #30 GTSF1 (ENSPCIG00000006731) #32 ENSPCIG00000006734 NCKAP1L (ENSPCIG00000006736) #33 PDE1B (ENSPCIG00000006745) #34 PPP1R1A (ENSPCIG00000007144) #35 Common wonbat MODERN SPECIES 780 HOXC8 (ENSVURG00010007922) #20 HOXC6 (ENSVURG00010007933) #21 HOXC5 (ENSVURG00010007940) #22 HOXC4 (ENSVURG00010007946) ENSVURG00010007951 CBX5 (ENSVURG00010007960) #24 ENSVURG00010007972 #25 NFE2 (ENSVURG00010008000) #26 COPZ1 (ENSVURG00010008020) #27 ENSVURG00010008113 ZNF385A (ENSVURG00010008127) #29 ITGA5 (ENSVURG00010008210) #30 GTSF1 (ENSVURG00010008247) #32 ENSVURG00010008256 NCKAP1L (ENSVURG00010008265) #33 PDE1B (ENSVURG00010008318) #34 PPP1R1A (ENSVURG00010008328) #35 ENSVURG00010008346 Wallaby MODERN SPECIES 9783 HOXC6 (ENSMEUG00000003418) #21 HOXC5 (ENSMEUG00000003425) #22 Tasmanian devil MODERN SPECIES 4 ENSSHAG00000007342 #8 MAP3K12 (ENSSHAG00000007265) #9 TARBP2 (ENSSHAG00000007064) #10 NPFF (ENSSHAG00000007053) #11 ATF7 (ENSSHAG00000006701) #12 ENSSHAG00000020669 #13 CALCOCO1 (ENSSHAG00000004757) #14 HOXC13 (ENSSHAG00000024515) #16 HOXC12 (ENSSHAG00000032054) #17 HOXC11 (ENSSHAG00000027021) #18 HOXC10 (ENSSHAG00000006601) HOXC9 (ENSSHAG00000022786) #19 HOXC8 (ENSSHAG00000023224) #20 ENSSHAG00000029109 #21 HOXC4 (ENSSHAG00000026999) HOXC5 (ENSSHAG00000020479) #22 ENSSHAG00000030453 ENSSHAG00000009596 CBX5 (ENSSHAG00000028489) #24 NFE2 (ENSSHAG00000010023) #26 ENSSHAG00000009954 ##25 ENSSHAG00000023257 COPZ1 (ENSSHAG00000025692) #27 GPR84 (ENSSHAG00000010857) #28 ZNF385A (ENSSHAG00000010898) #29 ITGA5 (ENSSHAG00000011104) #30 GTSF1 (ENSSHAG00000026276) #32 NCKAP1L (ENSSHAG00000012023) #33 PDE1B (ENSSHAG00000012340) #34 PPP1R1A (ENSSHAG00000026531) #35 ENSSHAG00000007020 Platypus MODERN SPECIES 1 AMHR2 (ENSOANG00000040113) PCBP2 (ENSOANG00000046601) #8 MAP3K12 (ENSOANG00000045742) #9 TARBP2 (ENSOANG00000038528) #10 ENSOANG00000036045 ATF7 (ENSOANG00000037869) #12 ENSOANG00000011230 #13 CALCOCO1 (ENSOANG00000043577) #14 HOXC13 (ENSOANG00000015090) #16 HOXC12 (ENSOANG00000015091) #17 HOXC11 (ENSOANG00000013040) #18 HOXC10 (ENSOANG00000013041) HOXC9 (ENSOANG00000047626) #19 HOXC8 (ENSOANG00000014218) #20 HOXC6 (ENSOANG00000046423) #21 HOXC5 (ENSOANG00000042573) #22 HOXC4 (ENSOANG00000038374) SMUG1 (ENSOANG00000006508) #23 CBX5 (ENSOANG00000004199) #24 NFE2 (ENSOANG00000037025) #26 COPZ1 (ENSOANG00000043627) #27 GPR84 (ENSOANG00000012928) #28 ZNF385A (ENSOANG00000037397) #29 ITGA5 (ENSOANG00000008006) #30 GTSF1 (ENSOANG00000011386) #32 NCKAP1L (ENSOANG00000000421) #33 PDE1B (ENSOANG00000003121) #34 ENSOANG00000039752 #35 ENSOANG00000012177 ENSOANG00000041959 OR9K2 (ENSOANG00000015969) Sauria ANCESTRAL SPECIES 25 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671.b #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000164745.c.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 Lepidosauria ANCESTRAL SPECIES 73 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000159522.e ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671.b #28 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000164745.c.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 Episquamata ANCESTRAL SPECIES 4 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000159522.e ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671.b #28 ENSGT00940000160876 #29 ENSGT00940000154118.a.b ENSGT00940000160660 ENSGT00950000183081.a.a.b ENSGT00940000158240 ENSGT00940000159609 ENSGT01090000259987.a.a.b Laterata ANCESTRAL SPECIES 1 ENSGT00990000209831 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000159522.e ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000156511 ENSGT00390000009609 ENSGT00940000160876 #29 ENSGT00940000154118.a.b ENSGT00940000160660 ENSGT00950000183081.a.a.b ENSGT00940000158240 ENSGT00940000159609 Common wall lizard MODERN SPECIES 10 ENSPMRG00000001332 ENSPMRG00000001341 TARBP2 (ENSPMRG00000001360) #10 NPFF (ENSPMRG00000001379) #11 ATF7 (ENSPMRG00000001388) #12 ENSPMRG00000001403 CALCOCO1 (ENSPMRG00000001418) #14 ENSPMRG00000001431 HOXC13 (ENSPMRG00000001436) #16 HOXC12 (ENSPMRG00000001444) #17 HOXC11 (ENSPMRG00000001445) #18 HOXC10 (ENSPMRG00000001453) HOXC9 (ENSPMRG00000001457) #19 HOXC8 (ENSPMRG00000001461) #20 HOXC6 (ENSPMRG00000001468) #21 HOXC5 (ENSPMRG00000001470) #22 HOXC4 (ENSPMRG00000001476) ENSPMRG00000001485 ENSPMRG00000001492 ENSPMRG00000001501 ENSPMRG00000001507 SMUG1 (ENSPMRG00000001513) #23 CBX5 (ENSPMRG00000001523) #24 ENSPMRG00000001529 #25 NFE2 (ENSPMRG00000001541) #26 ENSPMRG00000001546 COPZ1 (ENSPMRG00000001561) #27 ENSPMRG00000001575 ENSPMRG00000001587 ZNF385A (ENSPMRG00000001598) #29 ENSPMRG00000001609 Argentine black and white tegu MODERN SPECIES 18 SP1 (ENSSMRG00000003831) ENSSMRG00000003771 #8 MAP3K12 (ENSSMRG00000002781) #9 ENSSMRG00000002730 TARBP2 (ENSSMRG00000002725) #10 ATF7 (ENSSMRG00000002720) #12 ENSSMRG00000002669 #13 CALCOCO1 (ENSSMRG00000002659) #14 HOXC13 (ENSSMRG00000002595) #16 HOXC12 (ENSSMRG00000002593) #17 HOXC11 (ENSSMRG00000002589) #18 HOXC10 (ENSSMRG00000002587) HOXC9 (ENSSMRG00000002581) #19 HOXC8 (ENSSMRG00000002576) #20 HOXC6 (ENSSMRG00000002575) #21 HOXC5 (ENSSMRG00000002564) #22 HOXC4 (ENSSMRG00000002562) ENSSMRG00000002523 ENSSMRG00000002520 ENSSMRG00000002515 SMUG1 (ENSSMRG00000002499) #23 CBX5 (ENSSMRG00000002444) #24 ENSSMRG00000002434 #25 NFE2 (ENSSMRG00000002430) #26 ENSSMRG00000002423 COPZ1 (ENSSMRG00000002416) #27 ENSSMRG00000002400 ZNF385A (ENSSMRG00000002394) #29 ENSSMRG00000002302 MYO1A (ENSSMRG00000002216) CSAD (ENSSMRG00000002201) Toxicofera ANCESTRAL SPECIES 19 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000159522.e ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671.b #28 ENSGT00940000160876 #29 ENSGT00940000154118.a.b ENSGT00940000160660 ENSGT00950000183081.a.a.b ENSGT00940000158240 ENSGT00940000159609 ENSGT01090000259987.a.a.b Elapidae ANCESTRAL SPECIES 2 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b.d #14 ENSGT00950000183025.b.b.c #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000159522.e ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671.b #28 ENSGT00940000160876 #29 ENSGT00940000154118.a.b ENSGT00940000160660 ENSGT00950000183081.a.a.b ENSGT00940000158240 ENSGT00940000159609 ENSGT01090000259987.a.a.b Indian cobra MODERN SPECIES 1 MAP3K12 (ENSNNAG00000008985) #9 ENSNNAG00000009038 TARBP2 (ENSNNAG00000009069) #10 ENSNNAG00000009151 ATF7 (ENSNNAG00000009169) #12 ENSNNAG00000009241 #13 ENSNNAG00000009259 #14 HOXC13 (ENSNNAG00000009275) #16 HOXC12 (ENSNNAG00000009339) #17 HOXC11 (ENSNNAG00000009350) #18 ENSNNAG00000009373 HOXC10 (ENSNNAG00000009396) HOXC9 (ENSNNAG00000009425) #19 HOXC8 (ENSNNAG00000009434) #20 HOXC6 (ENSNNAG00000009459) #21 HOXC5 (ENSNNAG00000009479) #22 HOXC4 (ENSNNAG00000009525) ENSNNAG00000009549 SMUG1 (ENSNNAG00000009570) #23 CBX5 (ENSNNAG00000009628) #24 ENSNNAG00000009669 #25 NFE2 (ENSNNAG00000009787) #26 COPZ1 (ENSNNAG00000009805) #27 ZNF385A (ENSNNAG00000010008) #29 ENSNNAG00000011487 MYO1A (ENSNNAG00000011668) ENSNNAG00000012573 ENSNNAG00000012614 ENSNNAG00000012662 ENSNNAG00000012709 ENSNNAG00000012748 Elapidae_a ANCESTRAL SPECIES 54 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b.d #14 ENSGT00950000183025.b.b.c #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000159522.e ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671.b #28 ENSGT00940000160876 #29 Blue-lipped sea krait MODERN SPECIES 3301 HOXC6 (ENSLLTG00000001299) #21 HOXC5 (ENSLLTG00000001316) #22 HOXC4 (ENSLLTG00000001337) Acanthophiinae ANCESTRAL SPECIES 53 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b.d #14 ENSGT00950000183025.b.b.c #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00940000159522.e ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000161671.b #28 ENSGT00940000160876 #29 Mainland tiger snake MODERN SPECIES 90 MAP3K12 (ENSNSUG00000003022) #9 ENSNSUG00000003019 TARBP2 (ENSNSUG00000003015) #10 ATF7 (ENSNSUG00000002987) #12 ENSNSUG00000002985 #13 ENSNSUG00000002984 #14 ENSNSUG00000002983 #14 HOXC13 (ENSNSUG00000002982) #16 HOXC12 (ENSNSUG00000002981) #17 HOXC11 (ENSNSUG00000002980) #18 HOXC10 (ENSNSUG00000002979) ENSNSUG00000002978 HOXC9 (ENSNSUG00000002976) #19 HOXC8 (ENSNSUG00000002975) #20 HOXC6 (ENSNSUG00000002974) #21 HOXC5 (ENSNSUG00000002973) #22 HOXC4 (ENSNSUG00000002971) ENSNSUG00000002970 SMUG1 (ENSNSUG00000002968) #23 CBX5 (ENSNSUG00000002967) #24 ENSNSUG00000002960 #25 NFE2 (ENSNSUG00000002958) #26 COPZ1 (ENSNSUG00000002954) #27 GPR84 (ENSNSUG00000002951) #28 ZNF385A (ENSNSUG00000002748) #29 Eastern brown snake MODERN SPECIES 72 AMHR2 (ENSPTXG00000007213) PCBP2 (ENSPTXG00000007214) #8 MAP3K12 (ENSPTXG00000007215) #9 ENSPTXG00000007216 TARBP2 (ENSPTXG00000007217) #10 ATF7 (ENSPTXG00000007218) #12 ENSPTXG00000007219 #13 CALCOCO1 (ENSPTXG00000007220) #14 HOXC13 (ENSPTXG00000007221) #16 HOXC12 (ENSPTXG00000007222) #17 HOXC11 (ENSPTXG00000007223) #18 HOXC10 (ENSPTXG00000007224) HOXC9 (ENSPTXG00000007226) #19 HOXC8 (ENSPTXG00000007227) #20 HOXC6 (ENSPTXG00000007228) #21 HOXC5 (ENSPTXG00000007229) #22 HOXC4 (ENSPTXG00000007231) ENSPTXG00000007232 SMUG1 (ENSPTXG00000007233) #23 ENSPTXG00000007234 CBX5 (ENSPTXG00000007235) #24 ENSPTXG00000007236 #25 NFE2 (ENSPTXG00000007237) #26 COPZ1 (ENSPTXG00000007238) #27 GPR84 (ENSPTXG00000007240) #28 ZNF385A (ENSPTXG00000007241) #29 Lizard MODERN SPECIES 1 ENSACAG00000001246 #13 CALCOCO1 (ENSACAG00000001291) #14 ENSACAG00000043670 ENSACAG00000027080 ENSACAG00000042867 ENSACAG00000035871 ENSACAG00000045010 ENSACAG00000040386 ENSACAG00000045267 HOXC13 (ENSACAG00000010829) #16 HOXC12 (ENSACAG00000010840) #17 HOXC11 (ENSACAG00000010848) #18 HOXC9 (ENSACAG00000010895) #19 HOXC10 (ENSACAG00000010855) HOXC6 (ENSACAG00000010917) #21 HOXC5 (ENSACAG00000010927) #22 HOXC4 (ENSACAG00000010955) ENSACAG00000022360 ENSACAG00000044278 ENSACAG00000044425 SMUG1 (ENSACAG00000044199) #23 ENSACAG00000044996 CBX5 (ENSACAG00000013390) #24 ENSACAG00000007169 #25 NFE2 (ENSACAG00000028193) #26 COPZ1 (ENSACAG00000007123) #27 GPR84 (ENSACAG00000007635) #28 ZNF385A (ENSACAG00000007594) #29 ENSACAG00000040918 ENSACAG00000007510 ENSACAG00000007259 Archelosauria ANCESTRAL SPECIES 26 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000159286.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 Cryptodira ANCESTRAL SPECIES 25 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000159286.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b.e.a #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT01000000221715 ENSGT00940000160763 Testudinoidea ANCESTRAL SPECIES 21 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794.n ENSGT00390000004897 #23 ENSGT00940000163154.B.e.b.d.b ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000159286.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784.ib.b #32 Emydidae ANCESTRAL SPECIES 34 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794.n ENSGT00940000157315 ENSGT00390000017856.a ENSGT00940000156007 ENSGT00940000153305.c ENSGT00940000154431 ENSGT00950000182892.a.b.b ##26 ENSGT00390000003271 ENSGT00390000015236 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 ENSGT00940000155880 ENSGT00940000158500 ENSGT00940000156475 ENSGT00390000007287 painted turtle MODERN SPECIES 845 MAP3K12 (ENSCPBG00000000760) #9 ENSCPBG00000000700 ENSCPBG00000000687 TARBP2 (ENSCPBG00000000654) #10 NPFF (ENSCPBG00000000635) #11 ATF7 (ENSCPBG00000000581) #12 ENSCPBG00000000551 #13 CALCOCO1 (ENSCPBG00000000511) #14 HOXC13 (ENSCPBG00000000447) #16 HOXC12 (ENSCPBG00000000425) #17 HOXC11 (ENSCPBG00000000408) #18 HOXC10 (ENSCPBG00000000340) HOXC9 (ENSCPBG00000022354) #19 HOXC8 (ENSCPBG00000022351) #20 HOXC6 (ENSCPBG00000022347) #21 HOXC5 (ENSCPBG00000022342) #22 HOXC4 (ENSCPBG00000022338) ENSCPBG00000022335 SMUG1 (ENSCPBG00000022333) #23 ENSCPBG00000022330 CBX5 (ENSCPBG00000022329) #24 ENSCPBG00000022326 #25 NFE2 (ENSCPBG00000022324) #26 ENSCPBG00000022321 COPZ1 (ENSCPBG00000022318) #27 ENSCPBG00000022316 ZNF385A (ENSCPBG00000022312) #29 ITGA5 (ENSCPBG00000022309) #30 Three-toed box turtle MODERN SPECIES 383 AMHR2 (ENSTMTG00000005331) PCBP2 (ENSTMTG00000005243) #8 MAP3K12 (ENSTMTG00000005204) #9 ENSTMTG00000005186 TARBP2 (ENSTMTG00000005163) #10 ATF7 (ENSTMTG00000005026) #12 ENSTMTG00000004989 #13 CALCOCO1 (ENSTMTG00000004927) #14 HOXC13 (ENSTMTG00000004896) #16 HOXC12 (ENSTMTG00000004887) #17 HOXC11 (ENSTMTG00000004871) #18 HOXC10 (ENSTMTG00000004853) HOXC9 (ENSTMTG00000004828) #19 HOXC8 (ENSTMTG00000004809) #20 HOXC6 (ENSTMTG00000004783) #21 HOXC5 (ENSTMTG00000004765) #22 HOXC4 (ENSTMTG00000004746) ENSTMTG00000004737 SMUG1 (ENSTMTG00000004728) #23 CBX5 (ENSTMTG00000004711) #24 ENSTMTG00000004663 #25 NFE2 (ENSTMTG00000004642) #26 COPZ1 (ENSTMTG00000004619) #27 ENSTMTG00000004609 ZNF385A (ENSTMTG00000004508) #29 ITGA5 (ENSTMTG00000004428) #30 Testudinidae ANCESTRAL SPECIES 25 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794.n ENSGT00390000004897 #23 ENSGT00940000163154.B.e.b.d.b ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000159286.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784.ib.b.b #32 Abingdon island giant tortoise MODERN SPECIES 1188 MAP3K12 (ENSCABG00000004759) #9 ENSCABG00000004757 TARBP2 (ENSCABG00000004756) #10 ENSCABG00000004755 ATF7 (ENSCABG00000004698) #12 ENSCABG00000004693 #13 ENSCABG00000004691 CALCOCO1 (ENSCABG00000004690) #14 HOXC13 (ENSCABG00000004688) #16 HOXC12 (ENSCABG00000004687) #17 HOXC11 (ENSCABG00000004678) #18 HOXC10 (ENSCABG00000004674) HOXC9 (ENSCABG00000004668) #19 HOXC8 (ENSCABG00000004666) #20 HOXC6 (ENSCABG00000004665) #21 HOXC5 (ENSCABG00000004663) #22 HOXC4 (ENSCABG00000004661) ENSCABG00000004660 SMUG1 (ENSCABG00000004659) #23 CBX5 (ENSCABG00000004657) #24 ENSCABG00000004656 ENSCABG00000004651 #25 NFE2 (ENSCABG00000004649) #26 ENSCABG00000004646 COPZ1 (ENSCABG00000004645) #27 ENSCABG00000004642 ZNF385A (ENSCABG00000004280) #29 ITGA5 (ENSCABG00000004246) #30 ENSCABG00000004240 #32 ENSCABG00000004237 ENSCABG00000004233 Goode s thornscrub tortoise MODERN SPECIES 17 PCBP2 (ENSGEVG00005008987) #8 MAP3K12 (ENSGEVG00005004107) #9 ENSGEVG00005004089 TARBP2 (ENSGEVG00005004070) #10 NPFF (ENSGEVG00005004056) #11 ATF7 (ENSGEVG00005004038) #12 ENSGEVG00005004023 #13 CALCOCO1 (ENSGEVG00005003995) #14 HOXC13 (ENSGEVG00005003958) #16 HOXC12 (ENSGEVG00005003948) #17 HOXC11 (ENSGEVG00005003936) #18 HOXC10 (ENSGEVG00005003926) HOXC9 (ENSGEVG00005003914) #19 HOXC8 (ENSGEVG00005003904) #20 HOXC6 (ENSGEVG00005003893) #21 HOXC5 (ENSGEVG00005003884) #22 HOXC4 (ENSGEVG00005003868) ENSGEVG00005003863 SMUG1 (ENSGEVG00005003848) #23 ENSGEVG00005003836 CBX5 (ENSGEVG00005003826) #24 ENSGEVG00005003805 #25 NFE2 (ENSGEVG00005003785) #26 ENSGEVG00005003738 COPZ1 (ENSGEVG00005003721) #27 ENSGEVG00005003713 ZNF385A (ENSGEVG00005003460) #29 ITGA5 (ENSGEVG00005003183) #30 GTSF1 (ENSGEVG00005002973) #32 ENSGEVG00005002952 Chinese turtle MODERN SPECIES 1574 ATF7 (ENSPSIG00000005177) #12 ENSPSIG00000005112 #13 CALCOCO1 (ENSPSIG00000004935) #14 HOXC13 (ENSPSIG00000004928) #16 HOXC12 (ENSPSIG00000004903) #17 HOXC11 (ENSPSIG00000004848) #18 HOXC10 (ENSPSIG00000004830) HOXC9 (ENSPSIG00000004824) #19 HOXC8 (ENSPSIG00000004815) #20 HOXC6 (ENSPSIG00000004802) #21 HOXC5 (ENSPSIG00000004732) #22 HOXC4 (ENSPSIG00000004615) ENSPSIG00000004607 ENSPSIG00000000139 CBX5 (ENSPSIG00000004589) #24 ENSPSIG00000004486 #25 Archosauria ANCESTRAL SPECIES 33 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00390000015021 #11 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 ENSGT00530000063825.B Aves ANCESTRAL SPECIES 41 ENSGT00940000161293 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 ENSGT00530000063825.B Neognathae ANCESTRAL SPECIES 31 ENSGT00940000161293 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 ENSGT00530000063825.B Neognathae_b ANCESTRAL SPECIES 30 ENSGT00940000161293 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00390000004405.a #27 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 ENSGT00530000063825.B ENSGT00940000159931 Neognathae_c ANCESTRAL SPECIES 34 ENSGT00940000161293 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 ENSGT00530000063825.B ENSGT00940000159931 ENSGT00390000002307 ENSGT00940000159065 ENSGT00940000154610.e.b ENSGT00940000158414 Golden eagle MODERN SPECIES 6 AMHR2 (ENSACCG00020009950) PCBP2 (ENSACCG00020009932) #8 MAP3K12 (ENSACCG00020009899) #9 ENSACCG00020009882 #10 ENSACCG00020009866 #10 ENSACCG00020009852 ATF7 (ENSACCG00020009825) #12 ENSACCG00020009790 #13 HOXC13 (ENSACCG00020009769) #16 HOXC12 (ENSACCG00020009752) #17 HOXC11 (ENSACCG00020009738) #18 HOXC10 (ENSACCG00020009716) HOXC9 (ENSACCG00020009698) #19 HOXC8 (ENSACCG00020009682) #20 HOXC6 (ENSACCG00020009667) #21 HOXC5 (ENSACCG00020009653) #22 HOXC4 (ENSACCG00020009640) SMUG1 (ENSACCG00020009622) #23 CBX5 (ENSACCG00020009598) #24 ENSACCG00020009581 #25 NCKAP1L (ENSACCG00020009340) #33 PDE1B (ENSACCG00020008917) #34 PPP1R1A (ENSACCG00020008898) #35 ENSACCG00020008874 NEUROD4 (ENSACCG00020008843) ENDOU (ENSACCG00020008828) RAPGEF3 (ENSACCG00020008791) SLC48A1 (ENSACCG00020008764) ENSACCG00020008747 HDAC7 (ENSACCG00020008715) ENSACCG00020008673 Kakapo MODERN SPECIES 15 GLI1 (ENSSHBG00005016123) FAIM2 (ENSSHBG00005016126) AQP2 (ENSSHBG00005016130) AQP5 (ENSSHBG00005016132) ENSSHBG00005016139 ENSSHBG00005016144 ATF7 (ENSSHBG00005016145) #12 ENSSHBG00005016149 #13 HOXC13 (ENSSHBG00005016154) #16 HOXC12 (ENSSHBG00005016161) #17 HOXC11 (ENSSHBG00005016168) #18 HOXC10 (ENSSHBG00005016211) HOXC9 (ENSSHBG00005016223) #19 HOXC8 (ENSSHBG00005016230) #20 HOXC6 (ENSSHBG00005016234) #21 HOXC5 (ENSSHBG00005000733) #22 HOXC4 (ENSSHBG00005000743) ENSSHBG00005010094 #23 NEUROD4 (ENSSHBG00005010116) ENDOU (ENSSHBG00005010133) RAPGEF3 (ENSSHBG00005010173) SLC48A1 (ENSSHBG00005010209) HDAC7 (ENSSHBG00005010242) ENSSHBG00005010281 RACGAP1 (ENSSHBG00005010312) ASIC1 (ENSSHBG00005010353) SMARCD1 (ENSSHBG00005010382) GPD1 (ENSSHBG00005010424) ENSSHBG00005010452 CERS5 (ENSSHBG00005010483) LIMA1 (ENSSHBG00005010576) Galloanserae ANCESTRAL SPECIES 37 ENSGT00940000161293 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 ENSGT00530000063825.B ENSGT00940000159931 Anatidae ANCESTRAL SPECIES 110 ENSGT00940000155261 #12 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 Pink-footed goose MODERN SPECIES 390 ATF7 (ENSABRG00000020654) #12 HOXC13 (ENSABRG00000020671) #16 HOXC11 (ENSABRG00000020677) #18 HOXC10 (ENSABRG00000020680) HOXC9 (ENSABRG00000020683) #19 HOXC8 (ENSABRG00000020686) #20 HOXC5 (ENSABRG00000020689) #22 HOXC4 (ENSABRG00000020690) Phasianidae ANCESTRAL SPECIES 25 ENSGT00390000009446 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00940000155261 #12 ENSGT00940000157981.b #13 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897.p #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000164745.d ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT01000000221715 ENSGT00940000161232 #35 ENSGT00940000160763 ENSGT00940000160217 Japanese quail MODERN SPECIES 43 ENSCJPG00005007897 SP1 (ENSCJPG00005007894) PCBP2 (ENSCJPG00005007888) #8 MAP3K12 (ENSCJPG00005007718) #9 ENSCJPG00005007716 #10 ENSCJPG00005007715 ENSCJPG00005007713 ATF7 (ENSCJPG00005007711) #12 ENSCJPG00005007709 #13 HOXC13 (ENSCJPG00005007704) #16 HOXC11 (ENSCJPG00005007703) #18 HOXC10 (ENSCJPG00005007702) HOXC9 (ENSCJPG00005007700) #19 HOXC8 (ENSCJPG00005007699) #20 HOXC6 (ENSCJPG00005007698) #21 HOXC5 (ENSCJPG00005007697) #22 HOXC4 (ENSCJPG00005007695) ENSCJPG00005007690 #23 CBX5 (ENSCJPG00005007689) #24 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000161023 #22 Turkey MODERN SPECIES 726 ENSMGAG00000022554 #22 Anura ANCESTRAL SPECIES 3 ENSGT00940000160885 ENSGT00940000154129 #8 ENSGT00940000159006 #9 ENSGT00940000157748 #10 ENSGT00980000202663 ENSGT00940000155261 #12 ENSGT00940000157981.a.a ##13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #16 ENSGT00940000161307 #17 ENSGT00940000160009 #18 ENSGT00940000160855 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 ENSGT00390000004897 #23 ENSGT00940000158801 #24 ENSGT00950000183123 #25 ENSGT00950000182892.a.a.a #26 ENSGT00390000004405.a #27 ENSGT00940000159286.b ENSGT00940000160876 #29 ENSGT00940000158061 #30 ENSGT00940000156784 #32 ENSGT00940000164745.c.a ENSGT00390000016619.b #33 ENSGT00940000160712 #34 ENSGT00940000161232 #35 ENSGT00940000154770 Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000006071 ENSLLEG00000006056 TARBP2 (ENSLLEG00000005916) #10 ATF7 (ENSLLEG00000005791) #12 ENSLLEG00000005743 ##13 ENSLLEG00000005727 CALCOCO1 (ENSLLEG00000005659) #14 ENSLLEG00000005641 HOXC13 (ENSLLEG00000005628) #16 HOXC12 (ENSLLEG00000005614) #17 HOXC11 (ENSLLEG00000005582) #18 HOXC10 (ENSLLEG00000005564) HOXC9 (ENSLLEG00000005545) #19 HOXC8 (ENSLLEG00000005529) #20 HOXC6 (ENSLLEG00000005500) #21 HOXC5 (ENSLLEG00000005467) #22 HOXC4 (ENSLLEG00000005453) ENSLLEG00000005435 ENSLLEG00000005422 ENSLLEG00000005407 SMUG1 (ENSLLEG00000005391) #23 ENSLLEG00000005382 CBX5 (ENSLLEG00000005346) #24 ENSLLEG00000005297 #25 NFE2 (ENSLLEG00000005275) #26 ENSLLEG00000005258 COPZ1 (ENSLLEG00000005241) #27 ENSLLEG00000005236 ZNF385A (ENSLLEG00000005191) #29 ITGA5 (ENSLLEG00000005086) #30 ENSLLEG00000005061 Frog MODERN SPECIES 2 ENSXETG00000040320 pcbp3 (ENSXETG00000012658) #8 map3k12 (ENSXETG00000012650) #9 ENSXETG00000043101 tarbp2 (ENSXETG00000012644) #10 ENSXETG00000035352 atf7 (ENSXETG00000012641) #12 atp5mc1 (ENSXETG00000016655) ##13 ENSXETG00000045047 calcoco1 (ENSXETG00000031742) #14 HOXC13 (ENSXETG00000038664) #16 hoxc12 (ENSXETG00000023470) #17 hoxc10 (ENSXETG00000023472) hoxc9 (ENSXETG00000044877) #19 hoxc8 (ENSXETG00000023476) #20 hoxc5 (ENSXETG00000025183) #22 hoxc6 (ENSXETG00000042371) #21 hoxc4 (ENSXETG00000038997) hoxc3 (ENSXETG00000025181) smug1 (ENSXETG00000045852) #23 cbx5 (ENSXETG00000021279) #24 hnrnpa1 (ENSXETG00000021277) nfe2 (ENSXETG00000027400) #26 copz1 (ENSXETG00000027403) #27 gpr84 (ENSXETG00000021274) ENSXETG00000044693 znf385a (ENSXETG00000038504) #29 itga5 (ENSXETG00000021265) #30 gtsf1 (ENSXETG00000033546) #32 gtsf2 (ENSXETG00000021263) nckap1l (ENSXETG00000004299) #33