Glires ANCESTRAL SPECIES 4 ENSGT00940000154129 #9 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Rodentia ANCESTRAL SPECIES 5 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Myomorpha ANCESTRAL SPECIES 2 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Muroidea ANCESTRAL SPECIES 31 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Muroidea_A ANCESTRAL SPECIES 9 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Cricetidae ANCESTRAL SPECIES 10 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455.`b.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816.a #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157455.`b.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816.a #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Golden Hamster MODERN SPECIES 626 Sp1 (ENSMAUG00000018418) #7 Prr13 (ENSMAUG00000018724) #8 ENSMAUG00000018893 #9 Map3k12 (ENSMAUG00000019237) #10 Tarbp2 (ENSMAUG00000019805) #11 Atf7 (ENSMAUG00000020350) #12 ENSMAUG00000020460 #13 Calcoco1 (ENSMAUG00000013934) #14 Hoxc13 (ENSMAUG00000014990) #15 Hoxc12 (ENSMAUG00000015132) #16 Hoxc11 (ENSMAUG00000015214) #17 Hoxc10 (ENSMAUG00000015971) #18 Hoxc9 (ENSMAUG00000016070) #19 Hoxc8 (ENSMAUG00000016196) #20 Hoxc6 (ENSMAUG00000018788) #21 Hoxc5 (ENSMAUG00000018873) #22 Hoxc4 (ENSMAUG00000018883) #23 Smug1 (ENSMAUG00000018792) #24 Cbx5 (ENSMAUG00000018962) #25 Hnrnpa1 (ENSMAUG00000019184) #26 Nfe2 (ENSMAUG00000020513) #27 ENSMAUG00000020778 #28 ENSMAUG00000010848 #29 Zfp385a (ENSMAUG00000015687) #30 Itga5 (ENSMAUG00000017255) #31 Gtsf1 (ENSMAUG00000018746) #32 ENSMAUG00000017189 #33 Nckap1l (ENSMAUG00000018822) #34 Pde1b (ENSMAUG00000019170) #35 Ppp1r1a (ENSMAUG00000018584) #36 Tpp2 (ENSMAUG00000019359) #37 Chinese hamster chok1gshd MODERN SPECIES 1 Map3k12 (ENSCGRG00001012727) #10 Gm10337 (ENSCGRG00001010232) TARBP2 (ENSCGRG00001011856) #11 Npff (ENSCGRG00001012802) ENSCGRG00001015358 Atf7 (ENSCGRG00001016192) #12 ENSCGRG00001017197 ##13 Calcoco1 (ENSCGRG00001014119) #14 Hoxc13 (ENSCGRG00001013867) #15 Hoxc12 (ENSCGRG00001014493) #16 Hoxc11 (ENSCGRG00001013516) #17 Hoxc10 (ENSCGRG00001013473) #18 Hoxc9 (ENSCGRG00001013912) #19 Hoxc8 (ENSCGRG00001014315) #20 Hoxc6 (ENSCGRG00001014416) #21 Hoxc5 (ENSCGRG00001012661) #22 Hoxc4 (ENSCGRG00001013095) #23 Smug1 (ENSCGRG00001016146) #24 Cbx5 (ENSCGRG00001019018) #25 Hnrnpa1 (ENSCGRG00001013129) #26 Nfe2 (ENSCGRG00001022465) #27 Copz1 (ENSCGRG00001013501) #28 ENSCGRG00001009425 #29 Zfp385a (ENSCGRG00001015539) #30 Itga5 (ENSCGRG00001017691) #31 Gtsf1 (ENSCGRG00001013814) #32 Gtsf2 (ENSCGRG00001016136) #33 Nckap1l (ENSCGRG00001014386) #34 Pde1b (ENSCGRG00001017137) #35 Ppp1r1a (ENSCGRG00001013456) #36 Glycam1 (ENSCGRG00001016454) Cricetidae_B ANCESTRAL SPECIES 6 ENSGT00730000113467 #8 ENSGT00940000154129.m #9 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157455.`b.b #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816.a #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Prairie vole MODERN SPECIES 2 Prr13 (ENSMOCG00000014216) #8 ENSMOCG00000010409 #9 Map3k12 (ENSMOCG00000015681) #10 Tarbp2 (ENSMOCG00000003691) #11 Npff (ENSMOCG00000018084) Atf7 (ENSMOCG00000014166) #12 Atp5g2 (ENSMOCG00000012641) ##13 Calcoco1 (ENSMOCG00000010205) #14 Hoxc13 (ENSMOCG00000001084) #15 Hoxc12 (ENSMOCG00000016790) #16 Hoxc11 (ENSMOCG00000010091) #17 Hoxc10 (ENSMOCG00000009084) #18 Hoxc9 (ENSMOCG00000019623) #19 Hoxc8 (ENSMOCG00000016249) #20 Hoxc6 (ENSMOCG00000018874) #21 Hoxc5 (ENSMOCG00000013422) #22 Hoxc4 (ENSMOCG00000014873) #23 Smug1 (ENSMOCG00000017727) #24 ENSMOCG00000015075 #25 Hnrnpa1 (ENSMOCG00000004275) #26 Nfe2 (ENSMOCG00000019128) #27 Copz1 (ENSMOCG00000018095) #28 ENSMOCG00000011736 #29 Zfp385a (ENSMOCG00000006959) #30 Itga5 (ENSMOCG00000021919) #31 ENSMOCG00000010096 Gtsf1 (ENSMOCG00000018889) #32 Gtsf2 (ENSMOCG00000014770) #33 ENSMOCG00000011883 #34 ENSMOCG00000014544 #34 Pde1b (ENSMOCG00000008136) #35 Northern American deer mouse MODERN SPECIES 12 Prr13 (ENSPEMG00000017327) #8 ENSPEMG00000013236 #9 Map3k12 (ENSPEMG00000000990) #10 Tarbp2 (ENSPEMG00000014285) #11 Npff (ENSPEMG00000029282) Atf7 (ENSPEMG00000016864) #12 ENSPEMG00000017690 #13 Calcoco1 (ENSPEMG00000014813) #14 Hoxc13 (ENSPEMG00000005314) #15 Hoxc12 (ENSPEMG00000013217) #16 Hoxc11 (ENSPEMG00000011561) #17 Hoxc10 (ENSPEMG00000013609) #18 Hoxc9 (ENSPEMG00000025549) #19 Hoxc8 (ENSPEMG00000026440) #20 Hoxc6 (ENSPEMG00000026208) #21 Hoxc5 (ENSPEMG00000026211) #22 Hoxc4 (ENSPEMG00000015515) #23 ENSPEMG00000028406 Smug1 (ENSPEMG00000027645) #24 Cbx5 (ENSPEMG00000015648) #25 Hnrnpa1 (ENSPEMG00000012402) #26 Nfe2 (ENSPEMG00000011564) #27 Copz1 (ENSPEMG00000009405) #28 Gpr84 (ENSPEMG00000000618) Zfp385a (ENSPEMG00000018499) #30 Itga5 (ENSPEMG00000000509) #31 Gtsf1 (ENSPEMG00000009595) #32 ENSPEMG00000010828 #33 Nckap1l (ENSPEMG00000008686) #34 Pde1b (ENSPEMG00000018802) #35 Ppp1r1a (ENSPEMG00000000773) #36 Murinae ANCESTRAL SPECIES 10 ENSGT00940000154129.m #9 ENSGT00520000058554 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Rat MODERN SPECIES 17 Pcbp2 (ENSRNOG00000036852) #9 Map3k12 (ENSRNOG00000015134) #10 Gm10337 (ENSRNOG00000063518) Tarbp2 (ENSRNOG00000042355) #11 Atf7 (ENSRNOG00000015269) #12 Atp5mc2 (ENSRNOG00000015320) #13 Calcoco1 (ENSRNOG00000015447) #14 AABR07058934.1 (ENSRNOG00000016100) Hoxc13 (ENSRNOG00000028679) #15 Hoxc12 (ENSRNOG00000016116) #16 Hoxc11 (ENSRNOG00000016141) #17 Hoxc10 (ENSRNOG00000016149) #18 Hoxc9 (ENSRNOG00000016199) #19 Hoxc8 (ENSRNOG00000028619) #20 Hoxc6 (ENSRNOG00000063956) #21 Hoxc5 (ENSRNOG00000016598) #22 Hoxc4 (ENSRNOG00000016613) #23 Smug1 (ENSRNOG00000036842) #24 Cbx5 (ENSRNOG00000036841) #25 Hnrnpa1 (ENSRNOG00000036839) #26 Nfe2 (ENSRNOG00000036837) #27 AABR07058937.1 (ENSRNOG00000036836) Copz1 (ENSRNOG00000036835) #28 Gpr84 (ENSRNOG00000036834) #29 Zfp385a (ENSRNOG00000036833) #30 Itga5 (ENSRNOG00000057451) #31 Gtsf1 (ENSRNOG00000036831) #32 Gtsf2 (ENSRNOG00000036830) #33 Nckap1l (ENSRNOG00000036829) #34 Pde1b (ENSRNOG00000036828) #35 Ppp1r1a (ENSRNOG00000036827) #36 Mus ANCESTRAL SPECIES 11 ENSGT00940000154129.m #9 ENSGT00520000058554 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000159286.b.b ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Mus_A ANCESTRAL SPECIES 13 ENSGT00940000154129.m #9 ENSGT00520000058554 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261.e.a #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000159286.b.b ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Mus_B ANCESTRAL SPECIES 12 ENSGT00940000154129.m #9 ENSGT00520000058554 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261.e.a #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000159286.b.b ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Mouse MODERN SPECIES 6 Sp1 (ENSMUSG00000001280) #7 Amhr2 (ENSMUSG00000023047) Prr13 (ENSMUSG00000023048) #8 Pcbp2 (ENSMUSG00000056851) #9 Map3k12 (ENSMUSG00000023050) #10 Gm10337 (ENSMUSG00000071586) Tarbp2 (ENSMUSG00000023051) #11 Npff (ENSMUSG00000023052) Atf7 (ENSMUSG00000099083) #12 Atp5g2 (ENSMUSG00000062683) #13 Calcoco1 (ENSMUSG00000023055) #14 Hoxc13 (ENSMUSG00000001655) #15 Hoxc12 (ENSMUSG00000050328) #16 Hoxc11 (ENSMUSG00000001656) #17 Hoxc10 (ENSMUSG00000022484) #18 Hoxc5 (ENSMUSG00000022485) #22 Hoxc9 (ENSMUSG00000036139) #19 Hoxc8 (ENSMUSG00000001657) #20 Hoxc6 (ENSMUSG00000001661) #21 Hoxc4 (ENSMUSG00000075394) #23 Smug1 (ENSMUSG00000036061) #24 Cbx5 (ENSMUSG00000009575) #25 Hnrnpa1 (ENSMUSG00000046434) #26 Nfe2 (ENSMUSG00000058794) #27 Copz1 (ENSMUSG00000060992) #28 Gpr84 (ENSMUSG00000063234) Zfp385a (ENSMUSG00000000552) #30 Itga5 (ENSMUSG00000000555) #31 Gtsf1 (ENSMUSG00000022487) #32 Gtsf2 (ENSMUSG00000053508) #33 Nckap1l (ENSMUSG00000022488) #34 Mus_C ANCESTRAL SPECIES 17 ENSGT00940000154129.m #9 ENSGT00520000058554 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261.e.a #12 ENSGT00940000157455.y #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000159286.b.b ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 spretus MODERN SPECIES 6 Amhr2 (MGP_SPRETEiJ_G0021244) MGP_SPRETEiJ_G0021245 #8 Pcbp2 (MGP_SPRETEiJ_G0021246) #9 Map3k12 (MGP_SPRETEiJ_G0021247) #10 Gm10337 (MGP_SPRETEiJ_G0021248) Tarbp2 (MGP_SPRETEiJ_G0021249) #11 Npff (MGP_SPRETEiJ_G0021250) MGP_SPRETEiJ_G0021251 #12 MGP_SPRETEiJ_G0021252 #12 MGP_SPRETEiJ_G0021253 #13 Calcoco1 (MGP_SPRETEiJ_G0021254) #14 Hoxc13 (MGP_SPRETEiJ_G0021255) #15 Hoxc12 (MGP_SPRETEiJ_G0021256) #16 Hoxc11 (MGP_SPRETEiJ_G0021257) #17 Hoxc10 (MGP_SPRETEiJ_G0021258) #18 Hoxc5 (MGP_SPRETEiJ_G0021259) #22 Hoxc9 (MGP_SPRETEiJ_G0021260) #19 Hoxc8 (MGP_SPRETEiJ_G0021261) #20 Hoxc6 (MGP_SPRETEiJ_G0021262) #21 Hoxc4 (MGP_SPRETEiJ_G0021263) #23 Smug1 (MGP_SPRETEiJ_G0021264) #24 MGP_SPRETEiJ_G0021265 #25 Hnrnpa1 (MGP_SPRETEiJ_G0021266) #26 Nfe2 (MGP_SPRETEiJ_G0021267) #27 Copz1 (MGP_SPRETEiJ_G0021268) #28 Gpr84 (MGP_SPRETEiJ_G0021269) Zfp385a (MGP_SPRETEiJ_G0021270) #30 Itga5 (MGP_SPRETEiJ_G0021271) #31 Gtsf1 (MGP_SPRETEiJ_G0021272) #32 Gtsf2 (MGP_SPRETEiJ_G0021273) #33 Nckap1l (MGP_SPRETEiJ_G0021274) #34 Steppe mouse MODERN SPECIES 2761 ENSMSIG00000010172 #13 Calcoco1 (ENSMSIG00000010197) #14 ENSMSIG00000010371 ENSMSIG00000010395 ENSMSIG00000010401 Hoxc13 (ENSMSIG00000010407) #15 Hoxc12 (ENSMSIG00000010422) #16 Hoxc11 (ENSMSIG00000010467) #17 Hoxc10 (ENSMSIG00000010480) #18 Hoxc9 (ENSMSIG00000010497) #19 Hoxc8 (ENSMSIG00000010506) #20 Hoxc6 (ENSMSIG00000010510) #21 Hoxc5 (ENSMSIG00000010530) #22 Hoxc4 (ENSMSIG00000010551) #23 ENSMSIG00000010566 Smug1 (ENSMSIG00000010575) #24 Cbx5 (ENSMSIG00000010608) #25 Hnrnpa1 (ENSMSIG00000010644) #26 Nfe2 (ENSMSIG00000010777) #27 Copz1 (ENSMSIG00000010825) #28 Gpr84 (ENSMSIG00000010839) ENSMSIG00000010850 #30 Itga5 (ENSMSIG00000010915) #31 Gtsf1 (ENSMSIG00000010994) #32 Gtsf2 (ENSMSIG00000011099) #33 Nckap1l (ENSMSIG00000011126) #34 Pde1b (ENSMSIG00000011263) #35 Ppp1r1a (ENSMSIG00000011322) #36 Ryukyu mouse MODERN SPECIES 6 Amhr2 (MGP_CAROLIEiJ_G0020351) Prr13 (MGP_CAROLIEiJ_G0020352) #8 Pcbp2 (MGP_CAROLIEiJ_G0020353) #9 MGP_CAROLIEiJ_G0020354 Gm10337 (MGP_CAROLIEiJ_G0020355) Tarbp2 (MGP_CAROLIEiJ_G0020356) #11 Npff (MGP_CAROLIEiJ_G0020357) MGP_CAROLIEiJ_G0020358 #12 MGP_CAROLIEiJ_G0020359 #12 Atp5g2 (MGP_CAROLIEiJ_G0020360) #13 Calcoco1 (MGP_CAROLIEiJ_G0020361) #14 Hoxc13 (MGP_CAROLIEiJ_G0020362) #15 Hoxc12 (MGP_CAROLIEiJ_G0020363) #16 Hoxc11 (MGP_CAROLIEiJ_G0020364) #17 Hoxc10 (MGP_CAROLIEiJ_G0020365) #18 Hoxc5 (MGP_CAROLIEiJ_G0020366) #22 Hoxc9 (MGP_CAROLIEiJ_G0020367) #19 Hoxc8 (MGP_CAROLIEiJ_G0020368) #20 Hoxc6 (MGP_CAROLIEiJ_G0020369) #21 Hoxc4 (MGP_CAROLIEiJ_G0020370) #23 Smug1 (MGP_CAROLIEiJ_G0020371) #24 Cbx5 (MGP_CAROLIEiJ_G0020372) #25 MGP_CAROLIEiJ_G0020373 ##26 Nfe2 (MGP_CAROLIEiJ_G0020374) #27 Copz1 (MGP_CAROLIEiJ_G0020375) #28 Gpr84 (MGP_CAROLIEiJ_G0020376) Zfp385a (MGP_CAROLIEiJ_G0020377) #30 Itga5 (MGP_CAROLIEiJ_G0020378) #31 Gtsf1 (MGP_CAROLIEiJ_G0020379) #32 Gtsf2 (MGP_CAROLIEiJ_G0020380) #33 Nckap1l (MGP_CAROLIEiJ_G0020381) #34 Shrew mouse MODERN SPECIES 8 Amhr2 (MGP_PahariEiJ_G0020350) Prr13 (MGP_PahariEiJ_G0020351) #8 MGP_PahariEiJ_G0020352 #9 Map3k12 (MGP_PahariEiJ_G0020353) #10 Gm10337 (MGP_PahariEiJ_G0020354) Tarbp2 (MGP_PahariEiJ_G0020355) #11 Npff (MGP_PahariEiJ_G0020356) MGP_PahariEiJ_G0020357 #12 MGP_PahariEiJ_G0020358 #12 Atp5g2 (MGP_PahariEiJ_G0020359) #13 Calcoco1 (MGP_PahariEiJ_G0020360) #14 Hoxc13 (MGP_PahariEiJ_G0020361) #15 Hoxc12 (MGP_PahariEiJ_G0020362) #16 Hoxc11 (MGP_PahariEiJ_G0020363) #17 Hoxc10 (MGP_PahariEiJ_G0020364) #18 Hoxc5 (MGP_PahariEiJ_G0020365) #22 Hoxc9 (MGP_PahariEiJ_G0020366) #19 Hoxc8 (MGP_PahariEiJ_G0020367) #20 Hoxc6 (MGP_PahariEiJ_G0020368) #21 Hoxc4 (MGP_PahariEiJ_G0020369) #23 Smug1 (MGP_PahariEiJ_G0020370) #24 Cbx5 (MGP_PahariEiJ_G0020371) #25 MGP_PahariEiJ_G0020372 ##26 Nfe2 (MGP_PahariEiJ_G0020373) #27 Copz1 (MGP_PahariEiJ_G0020374) #28 Gpr84 (MGP_PahariEiJ_G0020375) Zfp385a (MGP_PahariEiJ_G0020376) #30 Itga5 (MGP_PahariEiJ_G0020377) #31 Gtsf1 (MGP_PahariEiJ_G0020378) #32 Gtsf2 (MGP_PahariEiJ_G0020379) #33 Nckap1l (MGP_PahariEiJ_G0020380) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 441 Pcbp2 (ENSNGAG00000012054) #9 Map3k12 (ENSNGAG00000017001) #10 ENSNGAG00000017769 #11 Npff (ENSNGAG00000019691) ENSNGAG00000016268 Atf7 (ENSNGAG00000018161) #12 ENSNGAG00000020790 #13 Calcoco1 (ENSNGAG00000022012) #14 Hoxc13 (ENSNGAG00000022328) #15 Hoxc12 (ENSNGAG00000022515) #16 Hoxc11 (ENSNGAG00000022627) #17 Hoxc10 (ENSNGAG00000022718) #18 Hoxc9 (ENSNGAG00000012023) #19 Hoxc8 (ENSNGAG00000012817) #20 Hoxc6 (ENSNGAG00000013313) #21 Hoxc5 (ENSNGAG00000015707) #22 Hoxc4 (ENSNGAG00000016300) #23 Smug1 (ENSNGAG00000019663) #24 Cbx5 (ENSNGAG00000016802) #25 Hnrnpa1 (ENSNGAG00000017304) #26 Nfe2 (ENSNGAG00000018088) #27 Copz1 (ENSNGAG00000000660) #28 ENSNGAG00000004911 #29 Zfp385a (ENSNGAG00000007963) #30 Itga5 (ENSNGAG00000013929) #31 Gtsf1 (ENSNGAG00000014213) #32 Gtsf2 (ENSNGAG00000008752) #33 Nckap1l (ENSNGAG00000011702) #34 Pde1b (ENSNGAG00000020387) #35 Ppp1r1a (ENSNGAG00000023027) #36 Lesser Egyptian jerboa MODERN SPECIES 42 Gm10337 (ENSJJAG00000003834) ENSJJAG00000007198 #11 Npff (ENSJJAG00000010307) ENSJJAG00000012378 Atf7 (ENSJJAG00000014294) #12 Atp5g2 (ENSJJAG00000009417) #13 Calcoco1 (ENSJJAG00000011789) #14 Hoxc13 (ENSJJAG00000023584) #15 Hoxc12 (ENSJJAG00000024305) #16 Hoxc11 (ENSJJAG00000007017) #17 Hoxc10 (ENSJJAG00000011018) #18 Hoxc9 (ENSJJAG00000020953) #19 Hoxc8 (ENSJJAG00000011647) #20 Hoxc4 (ENSJJAG00000017548) #23 Hoxc6 (ENSJJAG00000021603) #21 Hoxc5 (ENSJJAG00000020509) #22 Smug1 (ENSJJAG00000022700) #24 Cbx5 (ENSJJAG00000016164) #25 Hnrnpa1 (ENSJJAG00000024047) #26 Nfe2 (ENSJJAG00000011311) #27 Copz1 (ENSJJAG00000021645) #28 ENSJJAG00000001613 #29 Zfp385a (ENSJJAG00000021761) #30 Itga5 (ENSJJAG00000013501) #31 ENSJJAG00000003323 #32 Gtsf2 (ENSJJAG00000016320) #33 ENSJJAG00000016097 #34 ENSJJAG00000011759 #34 Pde1b (ENSJJAG00000015140) #35 ENSJJAG00000022930 #36 Glycam1 (ENSJJAG00000016549) Kangaroo rat MODERN SPECIES 474 Pcbp2 (ENSDORG00000001384) #9 Map3k12 (ENSDORG00000001389) #10 Tarbp2 (ENSDORG00000001390) #11 Npff (ENSDORG00000027814) Atf7 (ENSDORG00000001395) #12 Atp5g2 (ENSDORG00000002955) #13 Calcoco1 (ENSDORG00000002957) #14 Hoxc13 (ENSDORG00000023942) #15 Hoxc12 (ENSDORG00000026466) #16 Hoxc11 (ENSDORG00000006990) #17 Hoxc10 (ENSDORG00000006992) #18 Hoxc9 (ENSDORG00000028578) #19 Hoxc8 (ENSDORG00000023838) #20 Hoxc4 (ENSDORG00000007001) #23 Hoxc6 (ENSDORG00000027256) #21 Hoxc5 (ENSDORG00000006999) #22 Smug1 (ENSDORG00000024701) #24 Cbx5 (ENSDORG00000010625) #25 ENSDORG00000027821 Nfe2 (ENSDORG00000010629) #27 Copz1 (ENSDORG00000010630) #28 ENSDORG00000010631 #29 Zfp385a (ENSDORG00000027646) #30 Itga5 (ENSDORG00000008261) #31 Gtsf1 (ENSDORG00000003228) #32 Gtsf2 (ENSDORG00000026087) #33 Nckap1l (ENSDORG00000002123) #34 Pde1b (ENSDORG00000002126) #35 Ppp1r1a (ENSDORG00000002128) #36 Rodentia_A ANCESTRAL SPECIES 4 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157981.b ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Sciuridae ANCESTRAL SPECIES 15 ENSGT00940000154129.m #9 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.a.a.z ##26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Marmotini ANCESTRAL SPECIES 19 ENSGT00940000154129.m.s #9 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.a.a.z ##26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816.f #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Marmotini_b ANCESTRAL SPECIES 11 ENSGT00940000154129.m.s #9 ENSGT00940000159006 #10 ENSGT00520000058554 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157455 #13 ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.a.a.z ##26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816.f #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00520000060242 Squirrel MODERN SPECIES 112 PRR13 (ENSSTOG00000003624) ENSSTOG00000003635 #9 MAP3K12 (ENSSTOG00000023587) #10 ENSSTOG00000025374 TARBP2 (ENSSTOG00000003678) #11 NPFF (ENSSTOG00000032315) ATF7 (ENSSTOG00000006788) #12 ATP5MC2 (ENSSTOG00000008217) #13 CALCOCO1 (ENSSTOG00000007150) #14 HOXC12 (ENSSTOG00000019478) #16 HOXC11 (ENSSTOG00000028958) #17 HOXC10 (ENSSTOG00000012545) #18 HOXC9 (ENSSTOG00000012548) #19 HOXC8 (ENSSTOG00000012551) #20 HOXC6 (ENSSTOG00000016337) #21 HOXC5 (ENSSTOG00000016336) #22 HOXC4 (ENSSTOG00000020156) #23 SMUG1 (ENSSTOG00000004542) #24 CBX5 (ENSSTOG00000014668) #25 ENSSTOG00000006551 ##26 NFE2 (ENSSTOG00000012435) #27 COPZ1 (ENSSTOG00000021313) #28 GPR84 (ENSSTOG00000014678) #29 ZNF385A (ENSSTOG00000023730) #30 ITGA5 (ENSSTOG00000008042) #31 GTSF1 (ENSSTOG00000025170) #32 ENSSTOG00000030158 #33 NCKAP1L (ENSSTOG00000027248) #34 PDE1B (ENSSTOG00000008136) #35 PPP1R1A (ENSSTOG00000008155) #36 Arctic ground squirrel MODERN SPECIES 202 ENSUPAG00010020714 #9 ENSUPAG00010020704 MAP3K12 (ENSUPAG00010020680) #10 TARBP2 (ENSUPAG00010020659) #11 NPFF (ENSUPAG00010020645) ATF7 (ENSUPAG00010020626) #12 ENSUPAG00010020616 #13 CALCOCO1 (ENSUPAG00010020573) #14 HOXC13 (ENSUPAG00010020570) #15 HOXC12 (ENSUPAG00010020565) #16 HOXC11 (ENSUPAG00010020543) #17 HOXC10 (ENSUPAG00010020535) #18 HOXC9 (ENSUPAG00010020530) #19 HOXC8 (ENSUPAG00010020527) #20 HOXC6 (ENSUPAG00010020523) #21 HOXC5 (ENSUPAG00010020519) #22 HOXC4 (ENSUPAG00010020515) #23 SMUG1 (ENSUPAG00010020511) #24 CBX5 (ENSUPAG00010020504) #25 ENSUPAG00010020486 ##26 NFE2 (ENSUPAG00010020483) #27 COPZ1 (ENSUPAG00010020473) #28 ENSUPAG00010020470 ZNF385A (ENSUPAG00010020449) #30 ITGA5 (ENSUPAG00010020413) #31 GTSF1 (ENSUPAG00010020381) #32 ENSUPAG00010020372 #33 NCKAP1L (ENSUPAG00010020355) #34 PDE1B (ENSUPAG00010020332) #35 ENSUPAG00010020311 #36 ENSUPAG00010020301 Alpin marmot MODERN SPECIES 34 PRR13 (ENSMMMG00000002834) ENSMMMG00000002876 #9 MAP3K12 (ENSMMMG00000003252) #10 ENSMMMG00000003318 TARBP2 (ENSMMMG00000003329) #11 NPFF (ENSMMMG00000003352) ATF7 (ENSMMMG00000003376) #12 ATP5MC2 (ENSMMMG00000003392) #13 CALCOCO1 (ENSMMMG00000003404) #14 ENSMMMG00000003492 HOXC12 (ENSMMMG00000003500) #16 HOXC11 (ENSMMMG00000003528) #17 HOXC10 (ENSMMMG00000003541) #18 HOXC8 (ENSMMMG00000003555) #20 HOXC6 (ENSMMMG00000003562) #21 HOXC5 (ENSMMMG00000003567) #22 HOXC4 (ENSMMMG00000003571) #23 SMUG1 (ENSMMMG00000003585) #24 CBX5 (ENSMMMG00000003604) #25 ENSMMMG00000003625 ##26 NFE2 (ENSMMMG00000003708) #27 COPZ1 (ENSMMMG00000003722) #28 ENSMMMG00000003736 ZNF385A (ENSMMMG00000003744) #30 ITGA5 (ENSMMMG00000003779) #31 ENSMMMG00000003844 #33 NCKAP1L (ENSMMMG00000003866) #34 PDE1B (ENSMMMG00000003896) #35 ENSMMMG00000003982 #36 ENSMMMG00000003992 ENSMMMG00000004003 Eurasian red squirrel MODERN SPECIES 14 SP1 (ENSSVLG00005023931) #7 AMHR2 (ENSSVLG00005023965) PRR13 (ENSSVLG00005024006) ENSSVLG00005024125 #9 MAP3K12 (ENSSVLG00005024636) #10 TARBP2 (ENSSVLG00005024730) #11 NPFF (ENSSVLG00005024757) ATF7 (ENSSVLG00005024779) #12 ENSSVLG00005024802 #13 CALCOCO1 (ENSSVLG00005024843) #14 HOXC13 (ENSSVLG00005024880) #15 HOXC10 (ENSSVLG00005024954) #18 HOXC9 (ENSSVLG00005024979) #19 HOXC8 (ENSSVLG00005024998) #20 HOXC6 (ENSSVLG00005025017) #21 HOXC5 (ENSSVLG00005000186) #22 HOXC4 (ENSSVLG00005000207) #23 SMUG1 (ENSSVLG00005000267) #24 CBX5 (ENSSVLG00005000307) #25 ENSSVLG00005000496 #26 NFE2 (ENSSVLG00005000622) #27 COPZ1 (ENSSVLG00005000750) #28 GPR84 (ENSSVLG00005000857) #29 ZNF385A (ENSSVLG00005000920) #30 ITGA5 (ENSSVLG00005001034) #31 GTSF1 (ENSSVLG00005001091) #32 NCKAP1L (ENSSVLG00005001199) #34 ENSSVLG00005001287 #33 PDE1B (ENSSVLG00005001330) #35 PPP1R1A (ENSSVLG00005001371) #36 TESPA1 (ENSSVLG00005001405) Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00520000058554 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157981.b ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00940000160763 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00520000058554 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00900000143176 ENSGT00940000155261 #12 ENSGT00940000157981.b ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00940000160763 Guinea pig MODERN SPECIES 9 PCBP2 (ENSCPOG00000000967) #9 ENSCPOG00000032672 MAP3K12 (ENSCPOG00000000971) #10 NPFF (ENSCPOG00000032864) TARBP2 (ENSCPOG00000001009) #11 ENSCPOG00000033904 ATF7 (ENSCPOG00000039679) #12 ATP5MC2 (ENSCPOG00000038171) #13 CALCOCO1 (ENSCPOG00000021587) #14 HOXC13 (ENSCPOG00000020390) #15 HOXC12 (ENSCPOG00000026314) #16 HOXC11 (ENSCPOG00000033525) #17 HOXC10 (ENSCPOG00000009442) #18 HOXC8 (ENSCPOG00000039628) #20 HOXC6 (ENSCPOG00000032302) #21 HOXC5 (ENSCPOG00000009447) #22 HOXC4 (ENSCPOG00000035649) #23 SMUG1 (ENSCPOG00000034157) #24 CBX5 (ENSCPOG00000038461) #25 HNRNPA1 (ENSCPOG00000020972) #26 NFE2 (ENSCPOG00000030518) #27 COPZ1 (ENSCPOG00000007740) #28 GPR84 (ENSCPOG00000020750) #29 ZNF385A (ENSCPOG00000023870) #30 ITGA5 (ENSCPOG00000007748) #31 GTSF1 (ENSCPOG00000008743) #32 ENSCPOG00000023851 #33 NCKAP1L (ENSCPOG00000008748) #34 PDE1B (ENSCPOG00000015102) #35 PPP1R1A (ENSCPOG00000015100) #36 TESPA1 (ENSCPOG00000002912) Hystricomorpha_b ANCESTRAL SPECIES 53 ENSGT00940000160885 ENSGT00940000154129.m.y #9 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157981.b ENSGT00950000183025.b.b #14 ENSGT00940000161087 #15 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.a.b ##26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000161671 #29 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00940000163816 #33 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00940000160763 Long-tailed chinchilla MODERN SPECIES 165 ENSCLAG00000011497 ENSCLAG00000012230 #9 MAP3K12 (ENSCLAG00000007958) #10 TARBP2 (ENSCLAG00000009175) #11 NPFF (ENSCLAG00000007501) ATF7 (ENSCLAG00000009615) #12 ENSCLAG00000010492 CALCOCO1 (ENSCLAG00000008505) #14 HOXC13 (ENSCLAG00000012400) #15 HOXC12 (ENSCLAG00000012849) #16 HOXC11 (ENSCLAG00000010432) #17 HOXC10 (ENSCLAG00000010877) #18 HOXC9 (ENSCLAG00000008460) #19 HOXC8 (ENSCLAG00000008936) #20 HOXC6 (ENSCLAG00000009220) #21 HOXC5 (ENSCLAG00000007510) #22 HOXC4 (ENSCLAG00000009713) #23 SMUG1 (ENSCLAG00000009996) #24 CBX5 (ENSCLAG00000014138) #25 ENSCLAG00000011502 ##26 NFE2 (ENSCLAG00000008922) #27 COPZ1 (ENSCLAG00000009623) #28 ENSCLAG00000009971 ZNF385A (ENSCLAG00000012440) #30 ITGA5 (ENSCLAG00000012598) #31 GTSF1 (ENSCLAG00000012811) #32 ENSCLAG00000008579 #33 NCKAP1L (ENSCLAG00000012783) #34 PDE1B (ENSCLAG00000012001) #35 PPP1R1A (ENSCLAG00000008320) #36 TESPA1 (ENSCLAG00000010955) Degu MODERN SPECIES 134 MAP3K12 (ENSODEG00000013787) #10 TARBP2 (ENSODEG00000013413) #11 ENSODEG00000013431 ATF7 (ENSODEG00000014081) #12 ENSODEG00000013371 CALCOCO1 (ENSODEG00000013989) #14 ENSODEG00000020085 HOXC13 (ENSODEG00000013741) #15 HOXC12 (ENSODEG00000013405) #16 HOXC11 (ENSODEG00000013494) #17 HOXC10 (ENSODEG00000012845) #18 HOXC9 (ENSODEG00000013150) #19 HOXC8 (ENSODEG00000014014) #20 HOXC4 (ENSODEG00000013631) #23 HOXC6 (ENSODEG00000014430) #21 HOXC5 (ENSODEG00000014282) #22 SMUG1 (ENSODEG00000014942) #24 ENSODEG00000013220 #25 ENSODEG00000014815 ##26 NFE2 (ENSODEG00000014004) #27 COPZ1 (ENSODEG00000013855) #28 GPR84 (ENSODEG00000020196) #29 ZNF385A (ENSODEG00000013971) #30 ITGA5 (ENSODEG00000014190) #31 GTSF1 (ENSODEG00000014220) #32 ENSODEG00000013228 #33 NCKAP1L (ENSODEG00000015445) #34 PDE1B (ENSODEG00000013509) #35 PPP1R1A (ENSODEG00000013950) #36 ENSODEG00000013533 TESPA1 (ENSODEG00000014898) Naked mole-rat female MODERN SPECIES 8 ENSHGLG00000001776 #9 MAP3K12 (ENSHGLG00000001148) #10 ENSHGLG00000045875 #11 ENSHGLG00000034619 #11 ENSHGLG00000048122 ATF7 (ENSHGLG00000001620) #12 ENSHGLG00000043196 CALCOCO1 (ENSHGLG00000001954) #14 HOXC13 (ENSHGLG00000001849) #15 HOXC12 (ENSHGLG00000002214) #16 HOXC11 (ENSHGLG00000002244) #17 HOXC10 (ENSHGLG00000002263) #18 HOXC9 (ENSHGLG00000002316) #19 HOXC8 (ENSHGLG00000050680) #20 ENSHGLG00000046696 #21 HOXC5 (ENSHGLG00000002550) #22 HOXC4 (ENSHGLG00000002699) #23 ENSHGLG00000041830 #24 CBX5 (ENSHGLG00000046659) #25 ENSHGLG00000003139 NFE2 (ENSHGLG00000045831) #27 COPZ1 (ENSHGLG00000004132) #28 GPR84 (ENSHGLG00000037069) #29 ZNF385A (ENSHGLG00000001612) #30 ITGA5 (ENSHGLG00000002106) #31 ENSHGLG00000002436 #32 ENSHGLG00000002798 #33 NCKAP1L (ENSHGLG00000003165) #34 ENSHGLG00000003015 #35 PPP1R1A (ENSHGLG00000003378) #36 ENSHGLG00000032715 Lagomorpha ANCESTRAL SPECIES 30 ENSGT00940000157804 #7 ENSGT00940000160885 ENSGT00940000154129 #9 ENSGT00940000159006 #10 ENSGT00940000157748 #11 ENSGT00390000015021 ENSGT00940000155261 #12 ENSGT00940000157981.b ENSGT00950000183025.b.b #14 ENSGT00940000161307 #16 ENSGT00940000160009 #17 ENSGT00940000160855 #18 ENSGT00940000160866 #19 ENSGT00940000161194 #20 ENSGT00940000159254 #21 ENSGT00940000161023 #22 ENSGT00940000160794 #23 ENSGT00390000004897 #24 ENSGT00940000158801 #25 ENSGT00950000183123.g.a.b.b #26 ENSGT00950000182892.a.a.a #27 ENSGT00390000004405.a.n #28 ENSGT00940000160876 #30 ENSGT00940000158061 #31 ENSGT00940000156784 #32 ENSGT00390000016619.b #34 ENSGT00940000160712 #35 ENSGT00940000161232 #36 ENSGT00940000160763 ENSGT00940000160217 ENSGT01100000263494.a.a.a.a.a.d.b.c Pika MODERN SPECIES 753 HOXC13 (ENSOPRG00000006077) #15 HOXC11 (ENSOPRG00000006088) #17 HOXC6 (ENSOPRG00000006093) #21 HOXC5 (ENSOPRG00000006095) #22 HOXC4 (ENSOPRG00000006099) #23 CBX5 (ENSOPRG00000006101) #25 HNRNPA1 (ENSOPRG00000006107) #26 NFE2 (ENSOPRG00000006111) #27