Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000183145.E #22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183145.E #22 Euteleostomi ANCESTRAL SPECIES 625 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b ##22 ENSGT00940000162108 #26 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475 ENSGT00950000183145.B.a.a ##22 Sarcopterygii ANCESTRAL SPECIES 13 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000165188 ENSGT00940000157052 #18 ENSGT00390000010398.A ENSGT00940000169682 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.a ##22 ENSGT00950000183145.B.a.b ##22 ENSGT00940000162108 #26 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475 ENSGT00940000163882 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Tetrapoda ANCESTRAL SPECIES 17 ENSGT00940000160702 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.a ##22 ENSGT00950000183145.B.a.b ##22 ENSGT00940000162108 #26 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Amniota ANCESTRAL SPECIES 10 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Mammalia ANCESTRAL SPECIES 14 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000165188 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 Theria ANCESTRAL SPECIES 26 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Eutheria ANCESTRAL SPECIES 13 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00940000164044 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Boreoeutheria ANCESTRAL SPECIES 16 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 Euarchontoglires ANCESTRAL SPECIES 16 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 Primates ANCESTRAL SPECIES 16 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Strepsirrhini ANCESTRAL SPECIES 11 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Bushbaby MODERN SPECIES 136 BAG3 (ENSOGAG00000011421) #8 INPP5F (ENSOGAG00000009706) #9 MCMBP (ENSOGAG00000009714) #10 SEC23IP (ENSOGAG00000004948) #11 PLPP4 (ENSOGAG00000016998) #12 WDR11 (ENSOGAG00000012465) #13 FGFR2 (ENSOGAG00000012206) #14 ATE1 (ENSOGAG00000010023) #15 ENSOGAG00000031150 #16 NSMCE4A (ENSOGAG00000010026) #17 TACC2 (ENSOGAG00000010030) #18 BTBD16 (ENSOGAG00000010035) #19 ENSOGAG00000026108 ENSOGAG00000010036 #20 HTRA1 (ENSOGAG00000010043) #21 ENSOGAG00000033009 #22 Lemuriformes ANCESTRAL SPECIES 7 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00390000017384.j #31 ENSGT00940000163005 #30 ENSGT00390000017384.i #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 Mouse lemur MODERN SPECIES 6 BAG3 (ENSMICG00000027251) #8 INPP5F (ENSMICG00000007525) #9 MCMBP (ENSMICG00000007540) #10 SEC23IP (ENSMICG00000007551) #11 ENSMICG00000037953 PLPP4 (ENSMICG00000008887) #12 WDR11 (ENSMICG00000008892) #13 FGFR2 (ENSMICG00000000424) #14 ATE1 (ENSMICG00000009823) #15 NSMCE4A (ENSMICG00000042455) #17 TACC2 (ENSMICG00000009830) #18 BTBD16 (ENSMICG00000009849) #19 PLEKHA1 (ENSMICG00000037532) #20 HTRA1 (ENSMICG00000009867) #21 ENSMICG00000037650 ENSMICG00000037150 #22 C10orf120 (ENSMICG00000008567) #24 CUZD1 (ENSMICG00000044009) #29 ENSMICG00000035025 #31 ENSMICG00000008610 #30 ENSMICG00000015190 #31 PSTK (ENSMICG00000005140) #32 IKZF5 (ENSMICG00000043450) #33 ACADSB (ENSMICG00000000462) #34 HMX3 (ENSMICG00000000467) #35 HMX2 (ENSMICG00000000468) #36 BUB3 (ENSMICG00000000469) #37 GPR26 (ENSMICG00000045590) CPXM2 (ENSMICG00000008842) CHST15 (ENSMICG00000008853) OAT (ENSMICG00000003894) Lemuriformes_a ANCESTRAL SPECIES 42 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384.i #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Coquerels sifaka MODERN SPECIES 258 GRK5 (ENSPCOG00000022845) RGS10 (ENSPCOG00000020094) TIAL1 (ENSPCOG00000018990) #7 BAG3 (ENSPCOG00000027192) #8 INPP5F (ENSPCOG00000015152) #9 MCMBP (ENSPCOG00000020444) #10 PLPP4 (ENSPCOG00000025706) #12 WDR11 (ENSPCOG00000019354) #13 FGFR2 (ENSPCOG00000027873) #14 ATE1 (ENSPCOG00000026224) #15 NSMCE4A (ENSPCOG00000011420) #17 ENSPCOG00000026897 #18 BTBD16 (ENSPCOG00000020204) #19 PLEKHA1 (ENSPCOG00000027097) #20 HTRA1 (ENSPCOG00000021590) #21 ENSPCOG00000015298 #22 C10orf120 (ENSPCOG00000020092) #24 CUZD1 (ENSPCOG00000026175) #29 ENSPCOG00000008575 #30 ENSPCOG00000018262 #31 PSTK (ENSPCOG00000015070) #32 IKZF5 (ENSPCOG00000024918) #33 ACADSB (ENSPCOG00000017961) #34 HMX3 (ENSPCOG00000004827) #35 HMX2 (ENSPCOG00000021307) #36 BUB3 (ENSPCOG00000024614) #37 GPR26 (ENSPCOG00000019047) CPXM2 (ENSPCOG00000022596) CHST15 (ENSPCOG00000028486) OAT (ENSPCOG00000018744) NKX1-2 (ENSPCOG00000021546) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 193 BAG3 (ENSPSMG00000010989) #8 INPP5F (ENSPSMG00000010892) #9 MCMBP (ENSPSMG00000010773) #10 SEC23IP (ENSPSMG00000010732) #11 PLPP4 (ENSPSMG00000010705) #12 WDR11 (ENSPSMG00000010687) #13 FGFR2 (ENSPSMG00000009785) #14 ATE1 (ENSPSMG00000009100) #15 ENSPSMG00000008956 #16 NSMCE4A (ENSPSMG00000008948) #17 ENSPSMG00000008933 #18 ENSPSMG00000008723 #18 BTBD16 (ENSPSMG00000008410) #19 PLEKHA1 (ENSPSMG00000008359) #20 HTRA1 (ENSPSMG00000008292) #21 ENSPSMG00000008270 #22 ENSPSMG00000008256 #22 SPADH (ENSPSMG00000008250) #23 C10orf120 (ENSPSMG00000008229) #24 ENSPSMG00000008209 #25 ENSPSMG00000008149 #26 ENSPSMG00000008017 #27 ENSPSMG00000008008 #28 CUZD1 (ENSPSMG00000008002) #29 Greater bamboo lemur MODERN SPECIES 193 INPP5F (ENSPSMG00000010892) #9 MCMBP (ENSPSMG00000010773) #10 SEC23IP (ENSPSMG00000010732) #11 PLPP4 (ENSPSMG00000010705) #12 WDR11 (ENSPSMG00000010687) #13 FGFR2 (ENSPSMG00000009785) #14 ATE1 (ENSPSMG00000009100) #15 ENSPSMG00000008956 #16 NSMCE4A (ENSPSMG00000008948) #17 ENSPSMG00000008933 #18 ENSPSMG00000008723 #18 BTBD16 (ENSPSMG00000008410) #19 PLEKHA1 (ENSPSMG00000008359) #20 HTRA1 (ENSPSMG00000008292) #21 ENSPSMG00000008270 #22 ENSPSMG00000008256 #22 SPADH (ENSPSMG00000008250) #23 C10orf120 (ENSPSMG00000008229) #24 ENSPSMG00000008209 #25 ENSPSMG00000008149 #26 ENSPSMG00000008017 #27 ENSPSMG00000008008 #28 CUZD1 (ENSPSMG00000008002) #29 Haplorrhini ANCESTRAL SPECIES 11 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Tarsier MODERN SPECIES 5202 DMBT1 (ENSTSYG00000002122) #22 Simiiformes ANCESTRAL SPECIES 17 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00440000033468.c.b ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Catarrhini ANCESTRAL SPECIES 18 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00440000033468.c.b ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Hominoidea ANCESTRAL SPECIES 11 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.g #37 ENSGT00950000183001.a.a ENSGT00910000147603 Hominidae ANCESTRAL SPECIES 13 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.g #37 ENSGT00950000183001.a.a ENSGT00910000147603 Homo/Pan/Gorilla group ANCESTRAL SPECIES 17 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.g #37 ENSGT00950000183001.a.a ENSGT00910000147603 Homo/Pan group ANCESTRAL SPECIES 18 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.g #37 ENSGT00950000183001.a.a ENSGT00910000147603 Pan ANCESTRAL SPECIES 16 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.g #37 ENSGT00950000183001.a.a ENSGT00910000147603 ENSGT00940000156414 Bonobo MODERN SPECIES 1 ENSPPAG00000030508 INPP5F (ENSPPAG00000028448) #9 MCMBP (ENSPPAG00000041372) #10 SEC23IP (ENSPPAG00000021343) #11 ENSPPAG00000035383 PLPP4 (ENSPPAG00000040406) #12 WDR11 (ENSPPAG00000034753) #13 FGFR2 (ENSPPAG00000034123) #14 ATE1 (ENSPPAG00000039734) #15 ENSPPAG00000035638 #17 TACC2 (ENSPPAG00000038587) #18 BTBD16 (ENSPPAG00000042790) #19 PLEKHA1 (ENSPPAG00000003709) #20 ARMS2 (ENSPPAG00000041770) HTRA1 (ENSPPAG00000000055) #21 DMBT1 (ENSPPAG00000029246) #22 C10orf120 (ENSPPAG00000027128) #24 CUZD1 (ENSPPAG00000038806) #29 FAM24B (ENSPPAG00000030186) #30 ENSPPAG00000026413 #31 FAM24A (ENSPPAG00000029503) #30 C10orf88 (ENSPPAG00000040286) #31 PSTK (ENSPPAG00000030978) #32 IKZF5 (ENSPPAG00000032125) #33 ACADSB (ENSPPAG00000036912) #34 HMX3 (ENSPPAG00000043159) #35 ENSPPAG00000043570 #36 BUB3 (ENSPPAG00000030058) #37 ENSPPAG00000040773 ENSPPAG00000024928 CPXM2 (ENSPPAG00000037917) Chimpanzee MODERN SPECIES 1 ENSPTRG00000051748 INPP5F (ENSPTRG00000022873) #9 MCMBP (ENSPTRG00000003000) #10 SEC23IP (ENSPTRG00000003001) #11 ENSPTRG00000048120 PLPP4 (ENSPTRG00000029684) #12 WDR11 (ENSPTRG00000003004) #13 FGFR2 (ENSPTRG00000003003) #14 ATE1 (ENSPTRG00000003005) #15 NSMCE4A (ENSPTRG00000003006) #17 TACC2 (ENSPTRG00000003008) #18 BTBD16 (ENSPTRG00000003009) #19 PLEKHA1 (ENSPTRG00000003010) #20 ARMS2 (ENSPTRG00000051999) HTRA1 (ENSPTRG00000003011) #21 DMBT1 (ENSPTRG00000022758) #22 C10H10orf120 (ENSPTRG00000003012) #24 CUZD1 (ENSPTRG00000003015) #29 FAM24B (ENSPTRG00000034300) #30 ENSPTRG00000048474 #31 FAM24A (ENSPTRG00000029673) #30 C10H10orf88 (ENSPTRG00000003017) #31 PSTK (ENSPTRG00000003018) #32 IKZF5 (ENSPTRG00000003019) #33 ACADSB (ENSPTRG00000003020) #34 HMX3 (ENSPTRG00000046925) #35 HMX2 (ENSPTRG00000047334) #36 BUB3 (ENSPTRG00000044868) #37 GPR26 (ENSPTRG00000045403) ENSPTRG00000043279 CPXM2 (ENSPTRG00000003027) Human MODERN SPECIES 1 TIAL1 (ENSG00000151923) #7 BAG3 (ENSG00000151929) #8 INPP5F (ENSG00000198825) #9 MCMBP (ENSG00000197771) #10 SEC23IP (ENSG00000107651) #11 PLPP4 (ENSG00000203805) #12 WDR11 (ENSG00000120008) #13 FGFR2 (ENSG00000066468) #14 ATE1 (ENSG00000107669) #15 NSMCE4A (ENSG00000107672) #17 TACC2 (ENSG00000138162) #18 BTBD16 (ENSG00000138152) #19 PLEKHA1 (ENSG00000107679) #20 ARMS2 (ENSG00000254636) HTRA1 (ENSG00000166033) #21 DMBT1 (ENSG00000187908) #22 SPADH (ENSG00000286135) #23 C10orf120 (ENSG00000183559) #24 CUZD1 (ENSG00000138161) #29 FAM24B (ENSG00000213185) #30 FAM24A (ENSG00000203795) #30 C10orf88 (ENSG00000119965) #31 PSTK (ENSG00000179988) #32 IKZF5 (ENSG00000095574) #33 ACADSB (ENSG00000196177) #34 HMX3 (ENSG00000188620) #35 HMX2 (ENSG00000188816) #36 BUB3 (ENSG00000154473) #37 GPR26 (ENSG00000154478) CPXM2 (ENSG00000121898) CHST15 (ENSG00000182022) Orangutan MODERN SPECIES 1 BAG3 (ENSPPYG00000002705) #8 ENSPPYG00000031900 INPP5F (ENSPPYG00000002706) #9 MCMBP (ENSPPYG00000002707) #10 SEC23IP (ENSPPYG00000002708) #11 ENSPPYG00000030022 PLPP4 (ENSPPYG00000002709) #12 WDR11 (ENSPPYG00000029859) #13 FGFR2 (ENSPPYG00000002710) #14 ATE1 (ENSPPYG00000002711) #15 NSMCE4A (ENSPPYG00000002712) #17 TACC2 (ENSPPYG00000002713) #18 BTBD16 (ENSPPYG00000002714) #19 PLEKHA1 (ENSPPYG00000002715) #20 HTRA1 (ENSPPYG00000002716) #21 ENSPPYG00000002717 #22 SPADH (ENSPPYG00000002718) #23 C10orf120 (ENSPPYG00000002719) #24 CUZD1 (ENSPPYG00000002722) #29 ENSPPYG00000030182 #30 ENSPPYG00000037859 #31 FAM24A (ENSPPYG00000002724) #30 C10orf88 (ENSPPYG00000002725) #31 PSTK (ENSPPYG00000002726) #32 IKZF5 (ENSPPYG00000038620) #33 ACADSB (ENSPPYG00000002728) #34 HMX3 (ENSPPYG00000002729) #35 HMX2 (ENSPPYG00000033793) #36 BUB3 (ENSPPYG00000002731) #37 GPR26 (ENSPPYG00000002734) CPXM2 (ENSPPYG00000002735) Gibbon MODERN SPECIES 18 BAG3 (ENSNLEG00000016750) #8 ENSNLEG00000029480 INPP5F (ENSNLEG00000016753) #9 MCMBP (ENSNLEG00000016770) #10 SEC23IP (ENSNLEG00000016780) #11 PLPP4 (ENSNLEG00000028427) #12 WDR11 (ENSNLEG00000016815) #13 FGFR2 (ENSNLEG00000016854) #14 ATE1 (ENSNLEG00000016908) #15 NSMCE4A (ENSNLEG00000016919) #17 TACC2 (ENSNLEG00000016926) #18 BTBD16 (ENSNLEG00000016981) #19 PLEKHA1 (ENSNLEG00000016991) #20 ARMS2 (ENSNLEG00000016999) HTRA1 (ENSNLEG00000017001) #21 ENSNLEG00000017018 #22 C10orf120 (ENSNLEG00000017025) #24 CUZD1 (ENSNLEG00000017027) #29 FAM24B (ENSNLEG00000028659) #30 ENSNLEG00000017042 #31 FAM24A (ENSNLEG00000017045) #30 C10orf88 (ENSNLEG00000017047) #31 PSTK (ENSNLEG00000029733) #32 IKZF5 (ENSNLEG00000027055) #33 ACADSB (ENSNLEG00000026715) #34 HMX3 (ENSNLEG00000032860) #35 HMX2 (ENSNLEG00000033504) #36 BUB3 (ENSNLEG00000030093) #37 GPR26 (ENSNLEG00000030894) ENSNLEG00000027584 CPXM2 (ENSNLEG00000017056) Cercopithecidae ANCESTRAL SPECIES 15 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00910000148049 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.i.a #37 ENSGT00950000183001.a.a Rhinopithecus ANCESTRAL SPECIES 34 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.a.a #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00910000148049 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.i.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Black snub-nosed monkey MODERN SPECIES 403 IGF2BP3 (ENSRBIG00000033008) MALSU1 (ENSRBIG00000043513) INPP5F (ENSRBIG00000029982) #9 MCMBP (ENSRBIG00000043184) #10 SEC23IP (ENSRBIG00000016638) #11 PLPP4 (ENSRBIG00000028012) #12 WDR11 (ENSRBIG00000030219) #13 FGFR2 (ENSRBIG00000028118) #14 ENSRBIG00000037682 ATE1 (ENSRBIG00000039407) #15 NSMCE4A (ENSRBIG00000032411) #17 TACC2 (ENSRBIG00000029332) #18 BTBD16 (ENSRBIG00000032916) #19 PLEKHA1 (ENSRBIG00000033706) #20 HTRA1 (ENSRBIG00000037080) #21 ENSRBIG00000044070 #22 Golden snub-nosed monkey MODERN SPECIES 813 TACC2 (ENSRROG00000041105) #18 BTBD16 (ENSRROG00000039453) #19 PLEKHA1 (ENSRROG00000034004) #20 HTRA1 (ENSRROG00000039096) #21 DMBT1 (ENSRROG00000037950) #22 C10orf120 (ENSRROG00000040542) #24 CUZD1 (ENSRROG00000034208) #29 FAM24B (ENSRROG00000044993) #30 FAM24A (ENSRROG00000025149) #30 C10orf88 (ENSRROG00000026348) #31 ENSRROG00000042113 PSTK (ENSRROG00000010210) #32 IKZF5 (ENSRROG00000023471) #33 ACADSB (ENSRROG00000042969) #34 HMX3 (ENSRROG00000039758) #35 HMX2 (ENSRROG00000038682) #36 ENSRROG00000043912 #37 GPR26 (ENSRROG00000034092) CPXM2 (ENSRROG00000034798) CHST15 (ENSRROG00000036235) Cercopithecinae ANCESTRAL SPECIES 15 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00910000148049 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.i.a #37 ENSGT00950000183001.a.a Vervet Monkey MODERN SPECIES 28 RGS10 (ENSCSAG00000004742) TIAL1 (ENSCSAG00000004734) #7 BAG3 (ENSCSAG00000004728) #8 INPP5F (ENSCSAG00000004724) #9 MCMBP (ENSCSAG00000004719) #10 SEC23IP (ENSCSAG00000004713) #11 PLPP4 (ENSCSAG00000004702) #12 WDR11 (ENSCSAG00000004694) #13 FGFR2 (ENSCSAG00000004685) #14 ATE1 (ENSCSAG00000004660) #15 NSMCE4A (ENSCSAG00000004638) #17 TACC2 (ENSCSAG00000004625) #18 BTBD16 (ENSCSAG00000004617) #19 PLEKHA1 (ENSCSAG00000004609) #20 HTRA1 (ENSCSAG00000004604) #21 ENSCSAG00000004600 #22 C10orf120 (ENSCSAG00000004594) #24 CUZD1 (ENSCSAG00000004585) #29 FAM24B (ENSCSAG00000004575) #30 FAM24A (ENSCSAG00000004571) #30 C10orf88 (ENSCSAG00000004568) #31 PSTK (ENSCSAG00000004563) #32 IKZF5 (ENSCSAG00000004558) #33 ACADSB (ENSCSAG00000004557) #34 HMX3 (ENSCSAG00000004552) #35 HMX2 (ENSCSAG00000004550) #36 BUB3 (ENSCSAG00000004547) #37 GPR26 (ENSCSAG00000004541) CPXM2 (ENSCSAG00000004539) CHST15 (ENSCSAG00000004534) OAT (ENSCSAG00000004531) Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00910000148049 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.i.a #37 ENSGT00950000183001.a.a Cercopithecinae_b ANCESTRAL SPECIES 14 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.i.a #37 ENSGT00950000183001.a.a ENSGT00910000147603 ENSGT00940000156414 ENSGT00390000004719 Cercopithecinae_d ANCESTRAL SPECIES 64 ENSGT00940000159204 #8 ENSGT00940000154259.k.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.i.a #37 ENSGT00950000183001.a.a ENSGT00910000147603 ENSGT00940000156414 ENSGT00390000004719 Sooty mangabey MODERN SPECIES 527 ENSCATG00000036096 INPP5F (ENSCATG00000016832) #9 MCMBP (ENSCATG00000035237) #10 SEC23IP (ENSCATG00000031879) #11 ENSCATG00000039059 PLPP4 (ENSCATG00000008532) #12 WDR11 (ENSCATG00000043471) #13 FGFR2 (ENSCATG00000037271) #14 ATE1 (ENSCATG00000039070) #15 NSMCE4A (ENSCATG00000037970) #17 TACC2 (ENSCATG00000000364) #18 BTBD16 (ENSCATG00000012464) #19 PLEKHA1 (ENSCATG00000005094) #20 ARMS2 (ENSCATG00000026311) HTRA1 (ENSCATG00000038268) #21 DMBT1 (ENSCATG00000044187) #22 C10orf120 (ENSCATG00000033658) #24 ENSCATG00000036116 FAM24B (ENSCATG00000043992) #30 FAM24A (ENSCATG00000037982) #30 C10orf88 (ENSCATG00000038112) #31 PSTK (ENSCATG00000038639) #32 IKZF5 (ENSCATG00000035777) #33 ACADSB (ENSCATG00000035743) #34 HMX3 (ENSCATG00000037673) #35 HMX2 (ENSCATG00000017605) #36 ENSCATG00000045202 #37 ENSCATG00000012261 GPR26 (ENSCATG00000033714) ENSCATG00000008393 CPXM2 (ENSCATG00000023297) Olive baboon MODERN SPECIES 2 BAG3 (ENSPANG00000020521) #8 INPP5F (ENSPANG00000020522) #9 MCMBP (ENSPANG00000020524) #10 SEC23IP (ENSPANG00000020516) #11 PLPP4 (ENSPANG00000020515) #12 WDR11 (ENSPANG00000020499) #13 ENSPANG00000038420 ENSPANG00000044749 FGFR2 (ENSPANG00000020505) #14 ATE1 (ENSPANG00000020496) #15 NSMCE4A (ENSPANG00000020473) #17 TACC2 (ENSPANG00000020477) #18 BTBD16 (ENSPANG00000020479) #19 PLEKHA1 (ENSPANG00000020481) #20 HTRA1 (ENSPANG00000020482) #21 ENSPANG00000020483 #22 ENSPANG00000037364 SPADH (ENSPANG00000044363) #23 C10orf120 (ENSPANG00000046689) #24 CUZD1 (ENSPANG00000020487) #29 FAM24A (ENSPANG00000020495) #30 C10orf88 (ENSPANG00000020468) #31 PSTK (ENSPANG00000020470) #32 IKZF5 (ENSPANG00000020471) #33 ACADSB (ENSPANG00000020466) #34 HMX3 (ENSPANG00000046945) #35 HMX2 (ENSPANG00000043894) #36 ENSPANG00000020351 #37 GPR26 (ENSPANG00000020352) CPXM2 (ENSPANG00000020354) ENSPANG00000039743 Macaca ANCESTRAL SPECIES 11 ENSGT00500000044913.b ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00910000148049 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.i.a #37 ENSGT00950000183001.a.a Pig-tailed macaque MODERN SPECIES 92 WDR11 (ENSMNEG00000036981) #13 FGFR2 (ENSMNEG00000040871) #14 ATE1 (ENSMNEG00000039140) #15 NSMCE4A (ENSMNEG00000029721) #17 TACC2 (ENSMNEG00000035162) #18 BTBD16 (ENSMNEG00000043402) #19 PLEKHA1 (ENSMNEG00000042304) #20 ARMS2 (ENSMNEG00000037085) HTRA1 (ENSMNEG00000039398) #21 ENSMNEG00000035126 #22 C10orf120 (ENSMNEG00000032555) #24 CUZD1 (ENSMNEG00000033847) #29 FAM24B (ENSMNEG00000032458) #30 FAM24A (ENSMNEG00000039220) #30 C10orf88 (ENSMNEG00000033455) #31 ENSMNEG00000032659 PSTK (ENSMNEG00000029291) #32 IKZF5 (ENSMNEG00000036978) #33 ACADSB (ENSMNEG00000031260) #34 HMX3 (ENSMNEG00000043084) #35 HMX2 (ENSMNEG00000028435) #36 ENSMNEG00000000049 #37 GPR26 (ENSMNEG00000032420) ENSMNEG00000012185 CPXM2 (ENSMNEG00000042070) Macaca_a ANCESTRAL SPECIES 13 ENSGT00940000161627.a.a.a.b.b.b.a.a.a.a.c.a ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.b.b.b.a.b.a.b.b.a ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00910000148049 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.i.a #37 ENSGT00950000183001.a.a Crab-eating macaque MODERN SPECIES 19 SEC23IP (ENSMFAG00000042549) #11 ENSMFAG00000037481 #12 ENSMFAG00000062414 ENSMFAG00000065246 WDR11 (ENSMFAG00000031615) #13 ENSMFAG00000051354 FGFR2 (ENSMFAG00000045752) #14 ENSMFAG00000063455 ATE1 (ENSMFAG00000043722) #15 NSMCE4A (ENSMFAG00000000251) #17 TACC2 (ENSMFAG00000037369) #18 BTBD16 (ENSMFAG00000002237) #19 PLEKHA1 (ENSMFAG00000041484) #20 HTRA1 (ENSMFAG00000044439) #21 ENSMFAG00000062863 DMBT1 (ENSMFAG00000003903) #22 SPADH (ENSMFAG00000049536) #23 C10orf120 (ENSMFAG00000041530) #24 ENSMFAG00000046495 #26 CUZD1 (ENSMFAG00000033660) #29 FAM24B (ENSMFAG00000061971) #30 FAM24A (ENSMFAG00000060945) #30 C10orf88 (ENSMFAG00000062466) #31 ENSMFAG00000061411 ENSMFAG00000064549 PSTK (ENSMFAG00000036565) #32 IKZF5 (ENSMFAG00000046268) #33 ACADSB (ENSMFAG00000034302) #34 ENSMFAG00000041320 #36 BUB3 (ENSMFAG00000044849) #37 ENSMFAG00000053162 Rhesus DUPLICATION Rhesus MODERN SPECIES 19 ENSMMUG00000065302 SEC23IP (ENSMMUG00000009561) #11 PLPP4 (ENSMMUG00000008724) #12 ENSMMUG00000064321 ENSMMUG00000064557 WDR11 (ENSMMUG00000001118) #13 FGFR2 (ENSMMUG00000009594) #14 ENSMMUG00000059094 ATE1 (ENSMMUG00000021594) #15 NSMCE4A (ENSMMUG00000012044) #17 TACC2 (ENSMMUG00000013033) #18 BTBD16 (ENSMMUG00000013038) #19 PLEKHA1 (ENSMMUG00000013040) #20 HTRA1 (ENSMMUG00000056637) #21 ENSMMUG00000065343 #22 ENSMMUG00000021138 #22 SPADH (ENSMMUG00000052634) #23 C9H10orf120 (ENSMMUG00000021140) #24 CUZD1 (ENSMMUG00000010458) #29 FAM24A (ENSMMUG00000057705) #30 C9H10orf88 (ENSMMUG00000008564) #31 PSTK (ENSMMUG00000017858) #32 IKZF5 (ENSMMUG00000023480) #33 ACADSB (ENSMMUG00000000684) #34 HMX3 (ENSMMUG00000003090) #35 HMX2 (ENSMMUG00000053104) #36 BUB3 (ENSMMUG00000003092) #37 GPR26 (ENSMMUG00000053995) CPXM2 (ENSMMUG00000020346) ENSMMUG00000056443 ENSMMUG00000046183 Rhesus MODERN SPECIES 19 MCMBP (ENSMMUG00000009559) #10 ENSMMUG00000065302 SEC23IP (ENSMMUG00000009561) #11 PLPP4 (ENSMMUG00000008724) #12 ENSMMUG00000064321 ENSMMUG00000064557 WDR11 (ENSMMUG00000001118) #13 FGFR2 (ENSMMUG00000009594) #14 ENSMMUG00000059094 ATE1 (ENSMMUG00000021594) #15 NSMCE4A (ENSMMUG00000012044) #17 TACC2 (ENSMMUG00000013033) #18 BTBD16 (ENSMMUG00000013038) #19 PLEKHA1 (ENSMMUG00000013040) #20 HTRA1 (ENSMMUG00000056637) #21 ENSMMUG00000065343 #22 ENSMMUG00000021138 #22 SPADH (ENSMMUG00000052634) #23 C9H10orf120 (ENSMMUG00000021140) #24 CUZD1 (ENSMMUG00000010458) #29 FAM24A (ENSMMUG00000057705) #30 C9H10orf88 (ENSMMUG00000008564) #31 PSTK (ENSMMUG00000017858) #32 IKZF5 (ENSMMUG00000023480) #33 ACADSB (ENSMMUG00000000684) #34 HMX3 (ENSMMUG00000003090) #35 HMX2 (ENSMMUG00000053104) #36 BUB3 (ENSMMUG00000003092) #37 GPR26 (ENSMMUG00000053995) CPXM2 (ENSMMUG00000020346) ENSMMUG00000056443 Platyrrhini ANCESTRAL SPECIES 14 ENSGT00940000159204 #8 ENSGT00940000154259.k.a.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00650000095054 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00390000017384.h #31 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Mas night monkey MODERN SPECIES 802 PLPP4 (ENSANAG00000013394) #12 WDR11 (ENSANAG00000034731) #13 FGFR2 (ENSANAG00000030066) #14 ENSANAG00000017137 ATE1 (ENSANAG00000036713) #15 NSMCE4A (ENSANAG00000021849) #17 TACC2 (ENSANAG00000035884) #18 BTBD16 (ENSANAG00000028604) #19 PLEKHA1 (ENSANAG00000026667) #20 ARMS2 (ENSANAG00000024354) HTRA1 (ENSANAG00000023219) #21 ENSANAG00000030579 #22 C10orf120 (ENSANAG00000027570) #24 CUZD1 (ENSANAG00000021440) #29 FAM24B (ENSANAG00000020828) #30 ENSANAG00000018257 #31 FAM24A (ENSANAG00000014047) #30 C10orf88 (ENSANAG00000020459) #31 PSTK (ENSANAG00000037855) #32 IKZF5 (ENSANAG00000032569) #33 ACADSB (ENSANAG00000029052) #34 HMX3 (ENSANAG00000024547) #35 HMX2 (ENSANAG00000036077) #36 BUB3 (ENSANAG00000034868) #37 GPR26 (ENSANAG00000025234) CPXM2 (ENSANAG00000033303) CHST15 (ENSANAG00000036170) Cebidae ANCESTRAL SPECIES 17 ENSGT00500000044913.b ENSGT00940000159204 #8 ENSGT00940000154259.k.a.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Cebidae_a ANCESTRAL SPECIES 13 ENSGT00940000160482 #7 ENSGT00500000044913.b ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926.b #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000154525.b.a #29 ENSGT00940000163005.d #30 ENSGT00940000163005.c #30 ENSGT00390000017384.g #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895.w Bolivian squirrel monkey MODERN SPECIES 47 TIAL1 (ENSSBOG00000028408) #7 BAG3 (ENSSBOG00000033183) #8 INPP5F (ENSSBOG00000034456) #9 MCMBP (ENSSBOG00000029485) #10 SEC23IP (ENSSBOG00000028088) #11 ENSSBOG00000028957 PLPP4 (ENSSBOG00000027942) #12 WDR11 (ENSSBOG00000034391) #13 FGFR2 (ENSSBOG00000016345) #14 ATE1 (ENSSBOG00000033557) #15 NSMCE4A (ENSSBOG00000034475) #17 TACC2 (ENSSBOG00000034773) #18 BTBD16 (ENSSBOG00000030401) #19 PLEKHA1 (ENSSBOG00000032388) #20 HTRA1 (ENSSBOG00000022966) #21 ENSSBOG00000033598 #22 C10orf120 (ENSSBOG00000021674) #24 CUZD1 (ENSSBOG00000019778) #29 FAM24B (ENSSBOG00000034235) #30 FAM24A (ENSSBOG00000031885) #30 C10orf88 (ENSSBOG00000030071) #31 PSTK (ENSSBOG00000035695) #32 IKZF5 (ENSSBOG00000021900) #33 ACADSB (ENSSBOG00000026062) #34 HMX3 (ENSSBOG00000023320) #35 HMX2 (ENSSBOG00000021232) #36 BUB3 (ENSSBOG00000025883) #37 GPR26 (ENSSBOG00000029415) CPXM2 (ENSSBOG00000036010) CHST15 (ENSSBOG00000027985) OAT (ENSSBOG00000020910) Capuchin MODERN SPECIES 235 TMC4 (ENSCCAG00000004616) LENG1 (ENSCCAG00000032496) CNOT3 (ENSCCAG00000036290) ENSCCAG00000020552 TFPT (ENSCCAG00000028746) ENSCCAG00000035895 OSCAR (ENSCCAG00000032454) VSTM1 (ENSCCAG00000024468) CACNG6 (ENSCCAG00000036647) CACNG8 (ENSCCAG00000036186) CACNG7 (ENSCCAG00000033835) PRKCG (ENSCCAG00000024024) NLRP12 (ENSCCAG00000037077) ARMS2 (ENSCCAG00000038121) HTRA1 (ENSCCAG00000028776) #21 ENSCCAG00000033744 #22 C10orf120 (ENSCCAG00000020897) #24 CUZD1 (ENSCCAG00000010094) #29 FAM24B (ENSCCAG00000033608) #30 FAM24A (ENSCCAG00000034029) #30 C10orf88 (ENSCCAG00000029118) #31 PSTK (ENSCCAG00000027813) #32 IKZF5 (ENSCCAG00000030805) #33 ENSCCAG00000028196 ACADSB (ENSCCAG00000025590) #34 HMX3 (ENSCCAG00000021254) #35 HMX2 (ENSCCAG00000027587) #36 BUB3 (ENSCCAG00000035243) #37 GPR26 (ENSCCAG00000023527) CPXM2 (ENSCCAG00000029590) CHST15 (ENSCCAG00000023027) Marmoset DUPLICATION Marmoset MODERN SPECIES 3 ENSCJAG00000020378 BAG3 (ENSCJAG00000020374) #8 ENSCJAG00000087246 ENSCJAG00000013460 PLPP4 (ENSCJAG00000006402) #12 ENSCJAG00000071848 WDR11 (ENSCJAG00000006430) #13 ENSCJAG00000081690 ENSCJAG00000074755 FGFR2 (ENSCJAG00000001438) #14 ATE1 (ENSCJAG00000001411) #15 TACC2 (ENSCJAG00000001289) #18 BTBD16 (ENSCJAG00000001276) #19 ENSCJAG00000001251 #20 HTRA1 (ENSCJAG00000001226) #21 ENSCJAG00000082859 #22 ENSCJAG00000001157 #22 SPADH (ENSCJAG00000067245) #23 C10orf120 (ENSCJAG00000012735) #24 ENSCJAG00000061021 #26 CUZD1 (ENSCJAG00000001132) #29 FAM24B (ENSCJAG00000077353) #30 FAM24A (ENSCJAG00000086502) #30 C10orf88 (ENSCJAG00000001125) #31 PSTK (ENSCJAG00000001117) #32 IKZF5 (ENSCJAG00000065257) #33 ACADSB (ENSCJAG00000001092) #34 HMX3 (ENSCJAG00000085658) #35 HMX2 (ENSCJAG00000001081) #36 BUB3 (ENSCJAG00000001066) #37 GPR26 (ENSCJAG00000008190) Marmoset MODERN SPECIES 3 BAG3 (ENSCJAG00000020374) #8 ENSCJAG00000087246 ENSCJAG00000013460 PLPP4 (ENSCJAG00000006402) #12 ENSCJAG00000071848 WDR11 (ENSCJAG00000006430) #13 ENSCJAG00000081690 ENSCJAG00000074755 FGFR2 (ENSCJAG00000001438) #14 ATE1 (ENSCJAG00000001411) #15 TACC2 (ENSCJAG00000001289) #18 BTBD16 (ENSCJAG00000001276) #19 ENSCJAG00000001251 #20 HTRA1 (ENSCJAG00000001226) #21 ENSCJAG00000082859 #22 ENSCJAG00000001157 #22 SPADH (ENSCJAG00000067245) #23 C10orf120 (ENSCJAG00000012735) #24 ENSCJAG00000061021 #26 CUZD1 (ENSCJAG00000001132) #29 FAM24B (ENSCJAG00000077353) #30 FAM24A (ENSCJAG00000086502) #30 C10orf88 (ENSCJAG00000001125) #31 PSTK (ENSCJAG00000001117) #32 IKZF5 (ENSCJAG00000065257) #33 ACADSB (ENSCJAG00000001092) #34 HMX3 (ENSCJAG00000085658) #35 HMX2 (ENSCJAG00000001081) #36 BUB3 (ENSCJAG00000001066) #37 GPR26 (ENSCJAG00000008190) CPXM2 (ENSCJAG00000046273) Euarchontoglires_A ANCESTRAL SPECIES 15 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000164044 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Tree shrew MODERN SPECIES 4262 HTRA1 (ENSTBEG00000007636) #21 ENSTBEG00000008207 #22 Glires ANCESTRAL SPECIES 16 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000171163 ENSGT00940000164044 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Lagomorpha ANCESTRAL SPECIES 17 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 Rabbit MODERN SPECIES 9 BAG3 (ENSOCUG00000011696) #8 INPP5F (ENSOCUG00000002226) #9 MCMBP (ENSOCUG00000002235) #10 SEC23IP (ENSOCUG00000003141) #11 ENSOCUG00000017933 #12 WDR11 (ENSOCUG00000013912) #13 ENSOCUG00000001764 FGFR2 (ENSOCUG00000007069) #14 ATE1 (ENSOCUG00000003373) #15 NSMCE4A (ENSOCUG00000000820) #17 ENSOCUG00000026111 #18 ENSOCUG00000000821 #18 BTBD16 (ENSOCUG00000000825) #19 PLEKHA1 (ENSOCUG00000002100) #20 HTRA1 (ENSOCUG00000013478) #21 ENSOCUG00000013488 #22 ENSOCUG00000032261 #25 C10orf120 (ENSOCUG00000006564) #24 CYP2E1 (ENSOCUG00000007724) ENSOCUG00000007271 ENSOCUG00000016735 ENSOCUG00000026878 ENSOCUG00000023927 MTG1 (ENSOCUG00000000484) PAOX (ENSOCUG00000000479) ECHS1 (ENSOCUG00000000473) ENSOCUG00000000470 ENSOCUG00000029628 ADAM8 (ENSOCUG00000001216) ENSOCUG00000017194 CALY (ENSOCUG00000029346) Rodentia ANCESTRAL SPECIES 16 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Rodentia_B ANCESTRAL SPECIES 10 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Myomorpha ANCESTRAL SPECIES 1 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.b #11 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Muroidea ANCESTRAL SPECIES 1 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.b #11 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Muroidea_A ANCESTRAL SPECIES ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.b #11 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.b #11 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000171163 ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.a #11 ENSGT00940000156602.g.b #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES Mcmbp (ENSPEMG00000021598) #10 Sec23ip (ENSPEMG00000022060) #11 ENSPEMG00000025267 Plpp4 (ENSPEMG00000022713) #12 Wdr11 (ENSPEMG00000022330) #13 Fgfr2 (ENSPEMG00000014436) #14 Ate1 (ENSPEMG00000022740) #15 ENSPEMG00000025302 #16 Nsmce4a (ENSPEMG00000021690) #17 ENSPEMG00000009363 #18 ENSPEMG00000030243 #18 Btbd16 (ENSPEMG00000021258) #19 Plekha1 (ENSPEMG00000021169) #20 Htra1 (ENSPEMG00000022401) #21 ENSPEMG00000028257 #22 ENSPEMG00000024600 #22 4933402N03Rik (ENSPEMG00000021538) #24 Cdcp3 (ENSPEMG00000020751) #26 Cuzd1 (ENSPEMG00000022588) #29 Fam24a (ENSPEMG00000031419) 2310057M21Rik (ENSPEMG00000020879) #31 Pstk (ENSPEMG00000020718) #32 Ikzf5 (ENSPEMG00000025067) #33 Acadsb (ENSPEMG00000023029) #34 Hmx3 (ENSPEMG00000020746) #35 Hmx2 (ENSPEMG00000020567) #36 Bub3 (ENSPEMG00000022008) #37 Gpr26 (ENSPEMG00000021661) Cpxm2 (ENSPEMG00000010409) Chst15 (ENSPEMG00000025384) Oat (ENSPEMG00000000214) Northern American deer mouse MODERN SPECIES Inpp5f (ENSPEMG00000023406) #9 Mcmbp (ENSPEMG00000021598) #10 Sec23ip (ENSPEMG00000022060) #11 ENSPEMG00000025267 Plpp4 (ENSPEMG00000022713) #12 Wdr11 (ENSPEMG00000022330) #13 Fgfr2 (ENSPEMG00000014436) #14 Ate1 (ENSPEMG00000022740) #15 ENSPEMG00000025302 #16 Nsmce4a (ENSPEMG00000021690) #17 ENSPEMG00000009363 #18 ENSPEMG00000030243 #18 Btbd16 (ENSPEMG00000021258) #19 Plekha1 (ENSPEMG00000021169) #20 Htra1 (ENSPEMG00000022401) #21 ENSPEMG00000028257 #22 ENSPEMG00000024600 #22 4933402N03Rik (ENSPEMG00000021538) #24 Cdcp3 (ENSPEMG00000020751) #26 Cuzd1 (ENSPEMG00000022588) #29 Fam24a (ENSPEMG00000031419) 2310057M21Rik (ENSPEMG00000020879) #31 Pstk (ENSPEMG00000020718) #32 Ikzf5 (ENSPEMG00000025067) #33 Acadsb (ENSPEMG00000023029) #34 Hmx3 (ENSPEMG00000020746) #35 Hmx2 (ENSPEMG00000020567) #36 Bub3 (ENSPEMG00000022008) #37 Gpr26 (ENSPEMG00000021661) Cpxm2 (ENSPEMG00000010409) Chst15 (ENSPEMG00000025384) Murinae ANCESTRAL SPECIES ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Mus ANCESTRAL SPECIES ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Mus_A ANCESTRAL SPECIES 1 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Mus_B ANCESTRAL SPECIES ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602.g.a #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00940000164044.a ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Mouse MODERN SPECIES 16 Rgs10 (ENSMUSG00000030844) Tial1 (ENSMUSG00000030846) #7 Bag3 (ENSMUSG00000030847) #8 Inpp5f (ENSMUSG00000042105) #9 Mcmbp (ENSMUSG00000048170) #10 Sec23ip (ENSMUSG00000055319) #11 Plpp4 (ENSMUSG00000070366) #12 Wdr11 (ENSMUSG00000042055) #13 Fgfr2 (ENSMUSG00000030849) #14 Ate1 (ENSMUSG00000030850) #15 Nsmce4a (ENSMUSG00000040331) #17 Tacc2 (ENSMUSG00000030852) #18 Btbd16 (ENSMUSG00000040298) #19 Plekha1 (ENSMUSG00000040268) #20 Htra1 (ENSMUSG00000006205) #21 Dmbt1 (ENSMUSG00000047517) #22 4933402N03Rik (ENSMUSG00000013668) #24 Cdcp3 (ENSMUSG00000006204) #26 Cuzd1 (ENSMUSG00000040205) #29 Fam24b (ENSMUSG00000030858) Fam24a (ENSMUSG00000030859) 2310057M21Rik (ENSMUSG00000040177) #31 Pstk (ENSMUSG00000063179) #32 Ikzf5 (ENSMUSG00000040167) #33 Acadsb (ENSMUSG00000030861) #34 Hmx3 (ENSMUSG00000040148) #35 Hmx2 (ENSMUSG00000050100) #36 Bub3 (ENSMUSG00000066979) #37 Gpr26 (ENSMUSG00000040125) Cpxm2 (ENSMUSG00000030862) Chst15 (ENSMUSG00000030930) Rat DUPLICATION Rat MODERN SPECIES Mcmbp (ENSRNOG00000020394) #10 Sec23ip (ENSRNOG00000020411) #11 Plpp4 (ENSRNOG00000020424) #12 ENSRNOG00000066085 Wdr11 (ENSRNOG00000020430) #13 LOC102555739 (ENSRNOG00000020446) Fgfr2 (ENSRNOG00000016374) #14 Ate1 (ENSRNOG00000024414) #15 RGD1563285 (ENSRNOG00000069173) #16 Nsmce4a (ENSRNOG00000020452) #17 Tacc2 (ENSRNOG00000020457) #18 Btbd16 (ENSRNOG00000036675) #19 Plekha1 (ENSRNOG00000020497) #20 Htra1 (ENSRNOG00000020533) #21 Dmbt1 (ENSRNOG00000020560) #22 LOC100911413 (ENSRNOG00000034038) #22 C1h10orf120 (ENSRNOG00000022900) #24 Dmbt1l1 (ENSRNOG00000022737) #26 Cuzd1 (ENSRNOG00000029945) #29 RGD1559891 (ENSRNOG00000026440) Fam24b (ENSRNOG00000026419) C1h10orf88 (ENSRNOG00000020597) #31 Pstk (ENSRNOG00000020605) #32 Ikzf5 (ENSRNOG00000025651) #33 Acadsb (ENSRNOG00000020624) #34 Hmx3 (ENSRNOG00000020637) #35 Hmx2 (ENSRNOG00000020638) #36 Bub3 (ENSRNOG00000020643) #37 Gpr26 (ENSRNOG00000047057) Cpxm2 (ENSRNOG00000015902) AABR07005886.1 (ENSRNOG00000053539) Rat MODERN SPECIES Inpp5f (ENSRNOG00000020388) #9 Mcmbp (ENSRNOG00000020394) #10 Sec23ip (ENSRNOG00000020411) #11 Plpp4 (ENSRNOG00000020424) #12 ENSRNOG00000066085 Wdr11 (ENSRNOG00000020430) #13 LOC102555739 (ENSRNOG00000020446) Fgfr2 (ENSRNOG00000016374) #14 Ate1 (ENSRNOG00000024414) #15 RGD1563285 (ENSRNOG00000069173) #16 Nsmce4a (ENSRNOG00000020452) #17 Tacc2 (ENSRNOG00000020457) #18 Btbd16 (ENSRNOG00000036675) #19 Plekha1 (ENSRNOG00000020497) #20 Htra1 (ENSRNOG00000020533) #21 Dmbt1 (ENSRNOG00000020560) #22 LOC100911413 (ENSRNOG00000034038) #22 C1h10orf120 (ENSRNOG00000022900) #24 Dmbt1l1 (ENSRNOG00000022737) #26 Cuzd1 (ENSRNOG00000029945) #29 RGD1559891 (ENSRNOG00000026440) Fam24b (ENSRNOG00000026419) C1h10orf88 (ENSRNOG00000020597) #31 Pstk (ENSRNOG00000020605) #32 Ikzf5 (ENSRNOG00000025651) #33 Acadsb (ENSRNOG00000020624) #34 Hmx3 (ENSRNOG00000020637) #35 Hmx2 (ENSRNOG00000020638) #36 Bub3 (ENSRNOG00000020643) #37 Gpr26 (ENSRNOG00000047057) Cpxm2 (ENSRNOG00000015902) Rodentia_A ANCESTRAL SPECIES 15 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00390000005511 #24 ENSGT00950000183145.E #22 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Hystricomorpha ANCESTRAL SPECIES 1 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.o #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Naked mole-rat female MODERN SPECIES 4 PLPP4 (ENSHGLG00000012927) #12 ENSHGLG00000044013 WDR11 (ENSHGLG00000010871) #13 ENSHGLG00000011201 #14 ENSHGLG00000032507 ENSHGLG00000006514 ENSHGLG00000045128 ENSHGLG00000018201 #15 NSMCE4A (ENSHGLG00000013057) #17 ENSHGLG00000035516 #18 ENSHGLG00000014774 #18 BTBD16 (ENSHGLG00000010643) #19 ENSHGLG00000043818 ENSHGLG00000009809 #20 HTRA1 (ENSHGLG00000011897) #21 ENSHGLG00000014651 #22 ENSHGLG00000045576 #25 ENSHGLG00000041620 #26 ENSHGLG00000014383 ENSHGLG00000047493 ENSHGLG00000011520 ENSHGLG00000044519 ENSHGLG00000039988 ENSHGLG00000033348 ENSHGLG00000014509 TM9SF3 (ENSHGLG00000012450) TLL2 (ENSHGLG00000013626) OPALIN (ENSHGLG00000042100) DNTT (ENSHGLG00000009905) BLNK (ENSHGLG00000012499) ZNF518A (ENSHGLG00000021043) Hystricomorpha_a ANCESTRAL SPECIES 3 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035.e.a #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.o #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Hystricomorpha_b ANCESTRAL SPECIES 14 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035.e.a #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.o #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Degu MODERN SPECIES 51 ENSODEG00000017622 PLPP4 (ENSODEG00000017787) #12 ENSODEG00000017528 WDR11 (ENSODEG00000017999) #13 ENSODEG00000017729 ENSODEG00000017521 FGFR2 (ENSODEG00000017727) #14 ENSODEG00000017613 ATE1 (ENSODEG00000017714) #15 NSMCE4A (ENSODEG00000017586) #17 ENSODEG00000017758 #18 BTBD16 (ENSODEG00000017181) #19 ENSODEG00000017646 ENSODEG00000017854 #20 HTRA1 (ENSODEG00000017523) #21 ENSODEG00000017538 #22 ENSODEG00000017508 ENSODEG00000017380 #26 CUZD1 (ENSODEG00000017550) #29 C10orf88 (ENSODEG00000017572) #31 PSTK (ENSODEG00000017417) #32 ENSODEG00000017599 #33 ACADSB (ENSODEG00000017347) #34 HMX3 (ENSODEG00000017303) #35 HMX2 (ENSODEG00000017125) #36 ENSODEG00000017376 #37 ENSODEG00000020472 GPR26 (ENSODEG00000017488) CPXM2 (ENSODEG00000017290) CHST15 (ENSODEG00000017382) ENSODEG00000017605 Sciuridae ANCESTRAL SPECIES 21 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00390000005511 #24 ENSGT00950000183145.E #22 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000164044.b ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Eurasian red squirrel MODERN SPECIES 13 SEC23IP (ENSSVLG00005002496) #11 PLPP4 (ENSSVLG00005002461) #12 WDR11 (ENSSVLG00005002429) #13 FGFR2 (ENSSVLG00005002254) #14 ENSSVLG00005002095 ATE1 (ENSSVLG00005002012) #15 ENSSVLG00005001969 #16 ENSSVLG00005001936 #17 ENSSVLG00005001901 #18 ENSSVLG00005001566 #18 BTBD16 (ENSSVLG00005001375) #19 ENSSVLG00005001346 PLEKHA1 (ENSSVLG00005001323) #20 HTRA1 (ENSSVLG00005001280) #21 ENSSVLG00005001252 #24 ENSSVLG00005001198 #22 ENSSVLG00005001120 #26 CUZD1 (ENSSVLG00005001077) #29 ENSSVLG00005001055 #31 ENSSVLG00005001041 ENSSVLG00005001016 #31 PSTK (ENSSVLG00005000980) #32 IKZF5 (ENSSVLG00005000956) #33 ACADSB (ENSSVLG00005000924) #34 HMX3 (ENSSVLG00005000902) #35 HMX2 (ENSSVLG00005000888) #36 BUB3 (ENSSVLG00005000858) #37 ENSSVLG00005000813 GPR26 (ENSSVLG00005000793) CPXM2 (ENSSVLG00005000773) ENSSVLG00005000742 Marmotini ANCESTRAL SPECIES ENSGT00950000183145.E #22 Marmotini_b ANCESTRAL SPECIES ENSGT00950000183145.E #22 Arctic ground squirrel MODERN SPECIES 28 SEC23IP (ENSUPAG00010006554) #11 ENSUPAG00010006552 PLPP4 (ENSUPAG00010006532) #12 WDR11 (ENSUPAG00010006463) #13 FGFR2 (ENSUPAG00010006384) #14 ATE1 (ENSUPAG00010006266) #15 ENSUPAG00010006255 #16 NSMCE4A (ENSUPAG00010006240) #17 TACC2 (ENSUPAG00010005112) #18 BTBD16 (ENSUPAG00010004978) #19 ENSUPAG00010004971 ENSUPAG00010004924 #20 HTRA1 (ENSUPAG00010004911) #21 ENSUPAG00010004901 #24 ENSUPAG00010004894 ENSUPAG00010004857 #22 CUZD1 (ENSUPAG00010004852) #29 ENSUPAG00010004845 ENSUPAG00010004823 #31 PSTK (ENSUPAG00010004819) #32 IKZF5 (ENSUPAG00010004809) #33 ACADSB (ENSUPAG00010004778) #34 HMX3 (ENSUPAG00010004771) #35 HMX2 (ENSUPAG00010004763) #36 BUB3 (ENSUPAG00010004752) #37 GPR26 (ENSUPAG00010004746) CPXM2 (ENSUPAG00010004732) CHST15 (ENSUPAG00010004726) OAT (ENSUPAG00010004703) NKX1-2 (ENSUPAG00010004701) LHPP (ENSUPAG00010004693) Laurasiatheria ANCESTRAL SPECIES 14 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 Laurasiatheria_a ANCESTRAL SPECIES 15 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00940000163005.a #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 Artiodactyla ANCESTRAL SPECIES 14 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000163005.b #30 ENSGT00940000163005.a #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Artiodactyla_a ANCESTRAL SPECIES 14 ENSGT00940000159204 #8 ENSGT00940000166688 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000163005.b #30 ENSGT00940000163005.a #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Camelidae ANCESTRAL SPECIES 4 ENSGT00940000159204 #8 ENSGT00940000166688 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000163005.b #30 ENSGT00390000017384 #31 ENSGT00940000163005.a #30 Arabian camel MODERN SPECIES 2 INPP5F (ENSCDRG00005015415) #9 MCMBP (ENSCDRG00005015289) #10 SEC23IP (ENSCDRG00005015175) #11 PLPP4 (ENSCDRG00005015079) #12 WDR11 (ENSCDRG00005014918) #13 ENSCDRG00005014853 FGFR2 (ENSCDRG00005014046) #14 ATE1 (ENSCDRG00005013374) #15 ENSCDRG00005013283 #16 NSMCE4A (ENSCDRG00005013236) #17 TACC2 (ENSCDRG00005009143) #18 BTBD16 (ENSCDRG00005008822) #19 PLEKHA1 (ENSCDRG00005008676) #20 ENSCDRG00005008651 HTRA1 (ENSCDRG00005008605) #21 ENSCDRG00005008578 #22 ENSCDRG00005008546 #23 ENSCDRG00005008442 #23 ENSCDRG00005008386 #23 ENSCDRG00005008358 #23 C10orf120 (ENSCDRG00005008312) #24 ENSCDRG00005007985 #23 ENSCDRG00005007808 #26 ENSCDRG00005007759 #30 ENSCDRG00005007717 #30 ENSCDRG00005007572 #31 ENSCDRG00005007518 #31 PSTK (ENSCDRG00005007484) #32 IKZF5 (ENSCDRG00005007437) #33 ACADSB (ENSCDRG00005007354) #34 HMX3 (ENSCDRG00005007324) #35 Artiodactyla_b ANCESTRAL SPECIES 13 ENSGT00940000159204 #8 ENSGT00940000166688 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000163005.b #30 ENSGT00940000163005.a #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Pecora ANCESTRAL SPECIES 12 ENSGT00940000155996 #9 ENSGT00940000166688 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000169826 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000163005.b #30 ENSGT00940000163005.a #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Yarkand deer MODERN SPECIES 6 INPP5F (ENSCHYG00000008007) #9 ENSCHYG00000008228 MCMBP (ENSCHYG00000008251) #10 SEC23IP (ENSCHYG00000008365) #11 PLPP4 (ENSCHYG00000008482) #12 ENSCHYG00000008531 WDR11 (ENSCHYG00000008551) #13 FGFR2 (ENSCHYG00000008730) #14 ATE1 (ENSCHYG00000010156) #15 ENSCHYG00000010624 #16 NSMCE4A (ENSCHYG00000010654) #17 TACC2 (ENSCHYG00000010835) #18 BTBD16 (ENSCHYG00000011865) #19 PLEKHA1 (ENSCHYG00000012229) #20 HTRA1 (ENSCHYG00000012466) #21 ENSCHYG00000012574 #22 ENSCHYG00000012694 #26 C10orf120 (ENSCHYG00000012768) #24 ENSCHYG00000012814 ##22 ENSCHYG00000012970 #30 ENSCHYG00000013013 #31 ENSCHYG00000013157 #31 ENSCHYG00000013211 #30 IKZF5 (ENSCHYG00000013253) #33 ACADSB (ENSCHYG00000013318) #34 HMX3 (ENSCHYG00000013451) #35 HMX2 (ENSCHYG00000013483) #36 BUB3 (ENSCHYG00000013530) #37 GPR26 (ENSCHYG00000013748) CPXM2 (ENSCHYG00000013812) CHST15 (ENSCHYG00000014028) Percora_a ANCESTRAL SPECIES 14 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000169826 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d.b #23 ENSGT00390000012112.d.a #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Bovidae ANCESTRAL SPECIES 24 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000169826 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d.b #23 ENSGT00390000012112.d.a #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Caprinae ANCESTRAL SPECIES 19 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068.o #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d.b #23 ENSGT00390000012112.d.a #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00390000017384.x #31 ENSGT00940000163005.a #30 ENSGT00390000017384.w #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Rambouillet Sheep MODERN SPECIES 14 INPP5F (ENSOARG00020014985) #9 MCMBP (ENSOARG00020017074) #10 SEC23IP (ENSOARG00020017426) #11 ENSOARG00020018045 ENSOARG00020018072 PLPP4 (ENSOARG00020018154) #12 WDR11 (ENSOARG00020018347) #13 ENSOARG00020018691 FGFR2 (ENSOARG00020018761) #14 ENSOARG00020019110 ATE1 (ENSOARG00020019169) #15 NSMCE4A (ENSOARG00020019481) #17 BTBD16 (ENSOARG00020021862) #19 PLEKHA1 (ENSOARG00020021950) #20 HTRA1 (ENSOARG00020022118) #21 ENSOARG00020022216 #22 ENSOARG00020022252 ##22 ENSOARG00020022296 #23 ENSOARG00020022322 #23 ENSOARG00020022345 #23 C10orf120 (ENSOARG00020022395) #24 ENSOARG00020022445 #26 ENSOARG00020022472 #27 ENSOARG00020022490 #30 ENSOARG00020022507 ENSOARG00020022531 #31 ENSOARG00020022621 #30 ENSOARG00020022651 #31 PSTK (ENSOARG00020022690) #32 IKZF5 (ENSOARG00020022735) #33 ACADSB (ENSOARG00020022775) #34 Goat MODERN SPECIES 18 TIAL1 (ENSCHIG00000020810) #7 BAG3 (ENSCHIG00000019195) #8 INPP5F (ENSCHIG00000013653) #9 MCMBP (ENSCHIG00000016174) #10 SEC23IP (ENSCHIG00000014446) #11 ENSCHIG00000016797 PLPP4 (ENSCHIG00000013810) #12 ENSCHIG00000003717 #13 FGFR2 (ENSCHIG00000017963) #14 ATE1 (ENSCHIG00000011980) #15 NSMCE4A (ENSCHIG00000015022) #17 TACC2 (ENSCHIG00000013177) #18 BTBD16 (ENSCHIG00000021282) #19 PLEKHA1 (ENSCHIG00000005289) #20 HTRA1 (ENSCHIG00000015305) #21 ENSCHIG00000011076 #22 ENSCHIG00000020915 #23 ENSCHIG00000014539 #23 ENSCHIG00000000456 #23 C10orf120 (ENSCHIG00000016466) #24 ENSCHIG00000010921 #26 ENSCHIG00000023064 #31 ENSCHIG00000021927 #31 PSTK (ENSCHIG00000018657) #32 IKZF5 (ENSCHIG00000025772) #33 ACADSB (ENSCHIG00000024606) #34 HMX3 (ENSCHIG00000010956) #35 HMX2 (ENSCHIG00000026470) #36 BUB3 (ENSCHIG00000021092) #37 GPR26 (ENSCHIG00000011580) CPXM2 (ENSCHIG00000019349) Bovinae ANCESTRAL SPECIES 22 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00960000193053 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000169826 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d.b #23 ENSGT00390000012112.d.a #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000163005.b #30 ENSGT00390000017384.v #31 ENSGT00940000163005.a #30 ENSGT00390000017384.u #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 Bos ANCESTRAL SPECIES 23 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000169826 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d.b #23 ENSGT00390000012112.d.a #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000163005.b #30 ENSGT00390000017384.v #31 ENSGT00940000163005.a #30 ENSGT00390000017384.u #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000153295.a.e.a.b ENSGT00940000156525 #34 Bos_a ANCESTRAL SPECIES 17 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d.b #23 ENSGT00390000012112.d.a #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000163005.b #30 ENSGT00390000017384.v #31 ENSGT00940000163005.a #30 ENSGT00390000017384.u #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000153295.a.e.a.b ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 Domestic yak MODERN SPECIES 17 TIAL1 (ENSBGRG00000021417) #7 BAG3 (ENSBGRG00000021665) #8 INPP5F (ENSBGRG00000021737) #9 MCMBP (ENSBGRG00000022255) #10 ENSBGRG00000022579 SEC23IP (ENSBGRG00000022602) #11 ENSBGRG00000022938 #12 WDR11 (ENSBGRG00000023025) #13 FGFR2 (ENSBGRG00000023230) #14 ATE1 (ENSBGRG00000023442) #15 NSMCE4A (ENSBGRG00000023734) #17 ENSBGRG00000024000 #18 BTBD16 (ENSBGRG00000024940) #19 PLEKHA1 (ENSBGRG00000024986) #20 HTRA1 (ENSBGRG00000025045) #21 ENSBGRG00000025099 #22 ENSBGRG00000025138 #23 ENSBGRG00000025155 #23 ENSBGRG00000025185 #23 C10orf120 (ENSBGRG00000025213) #24 ENSBGRG00000025242 #26 ENSBGRG00000025332 #30 ENSBGRG00000025341 #31 ENSBGRG00000025366 #30 ENSBGRG00000025376 #31 PSTK (ENSBGRG00000025390) #32 IKZF5 (ENSBGRG00000025418) #33 ACADSB (ENSBGRG00000025451) #34 ENSBGRG00000025478 HMX3 (ENSBGRG00000025490) #35 HMX2 (ENSBGRG00000025503) #36 Wild yak DUPLICATION Wild yak MODERN SPECIES 302 ATE1 (ENSBMUG00000015088) #15 NSMCE4A (ENSBMUG00000014952) #17 TACC2 (ENSBMUG00000014772) #18 BTBD16 (ENSBMUG00000014447) #19 PLEKHA1 (ENSBMUG00000014404) #20 HTRA1 (ENSBMUG00000014370) #21 ENSBMUG00000014336 #22 ENSBMUG00000014303 #22 Wild yak MODERN SPECIES 302 ATE1 (ENSBMUG00000015088) #15 NSMCE4A (ENSBMUG00000014952) #17 TACC2 (ENSBMUG00000014772) #18 BTBD16 (ENSBMUG00000014447) #19 PLEKHA1 (ENSBMUG00000014404) #20 HTRA1 (ENSBMUG00000014370) #21 ENSBMUG00000014336 #22 ENSBMUG00000014303 #22 Bos_b ANCESTRAL SPECIES 23 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000169826 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c #23 ENSGT00390000012112.d.b #23 ENSGT00390000012112.d.a #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000163005.b #30 ENSGT00390000017384.v #31 ENSGT00940000163005.a #30 ENSGT00390000017384.u #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000153295.a.e.a.b ENSGT00940000156525 #34 Cow DUPLICATION Cow DUPLICATION Cow MODERN SPECIES 18 INPP5F (ENSBTAG00000021801) #9 MCMBP (ENSBTAG00000009877) #10 ENSBTAG00000048455 SEC23IP (ENSBTAG00000007441) #11 PLPP4 (ENSBTAG00000032106) #12 ENSBTAG00000049781 WDR11 (ENSBTAG00000021540) #13 FGFR2 (ENSBTAG00000014064) #14 ATE1 (ENSBTAG00000003178) #15 NSMCE4A (ENSBTAG00000019166) #17 TACC2 (ENSBTAG00000010786) #18 BTBD16 (ENSBTAG00000008819) #19 PLEKHA1 (ENSBTAG00000004636) #20 HTRA1 (ENSBTAG00000008389) #21 ENSBTAG00000050618 #22 ENSBTAG00000052092 #22 ENSBTAG00000053545 #22 ENSBTAG00000038684 #23 SPADH2 (ENSBTAG00000008029) #23 SPADH1 (ENSBTAG00000010796) #23 C26H10orf120 (ENSBTAG00000010797) #24 ENSBTAG00000039755 #26 ENSBTAG00000055162 #27 ENSBTAG00000051599 #28 ENSBTAG00000023846 #31 ENSBTAG00000023845 #31 PSTK (ENSBTAG00000014028) #32 IKZF5 (ENSBTAG00000023847) #33 ACADSB (ENSBTAG00000018041) #34 ENSBTAG00000048256 HMX3 (ENSBTAG00000001006) #35 Cow MODERN SPECIES 18 MCMBP (ENSBTAG00000009877) #10 ENSBTAG00000048455 SEC23IP (ENSBTAG00000007441) #11 PLPP4 (ENSBTAG00000032106) #12 ENSBTAG00000049781 WDR11 (ENSBTAG00000021540) #13 FGFR2 (ENSBTAG00000014064) #14 ATE1 (ENSBTAG00000003178) #15 NSMCE4A (ENSBTAG00000019166) #17 TACC2 (ENSBTAG00000010786) #18 BTBD16 (ENSBTAG00000008819) #19 PLEKHA1 (ENSBTAG00000004636) #20 HTRA1 (ENSBTAG00000008389) #21 ENSBTAG00000050618 #22 ENSBTAG00000052092 #22 ENSBTAG00000053545 #22 ENSBTAG00000038684 #23 SPADH2 (ENSBTAG00000008029) #23 SPADH1 (ENSBTAG00000010796) #23 C26H10orf120 (ENSBTAG00000010797) #24 ENSBTAG00000039755 #26 ENSBTAG00000055162 #27 ENSBTAG00000051599 #28 ENSBTAG00000023846 #31 ENSBTAG00000023845 #31 PSTK (ENSBTAG00000014028) #32 IKZF5 (ENSBTAG00000023847) #33 ACADSB (ENSBTAG00000018041) #34 ENSBTAG00000048256 HMX3 (ENSBTAG00000001006) #35 HMX2 (ENSBTAG00000017911) #36 Cow MODERN SPECIES 18 BAG3 (ENSBTAG00000013641) #8 INPP5F (ENSBTAG00000021801) #9 MCMBP (ENSBTAG00000009877) #10 ENSBTAG00000048455 SEC23IP (ENSBTAG00000007441) #11 PLPP4 (ENSBTAG00000032106) #12 ENSBTAG00000049781 WDR11 (ENSBTAG00000021540) #13 FGFR2 (ENSBTAG00000014064) #14 ATE1 (ENSBTAG00000003178) #15 NSMCE4A (ENSBTAG00000019166) #17 TACC2 (ENSBTAG00000010786) #18 BTBD16 (ENSBTAG00000008819) #19 PLEKHA1 (ENSBTAG00000004636) #20 HTRA1 (ENSBTAG00000008389) #21 ENSBTAG00000050618 #22 ENSBTAG00000052092 #22 ENSBTAG00000053545 #22 ENSBTAG00000038684 #23 SPADH2 (ENSBTAG00000008029) #23 SPADH1 (ENSBTAG00000010796) #23 C26H10orf120 (ENSBTAG00000010797) #24 ENSBTAG00000039755 #26 ENSBTAG00000055162 #27 ENSBTAG00000051599 #28 ENSBTAG00000023846 #31 ENSBTAG00000023845 #31 PSTK (ENSBTAG00000014028) #32 IKZF5 (ENSBTAG00000023847) #33 ACADSB (ENSBTAG00000018041) #34 ENSBTAG00000048256 Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 18 RGS10 (ENSBIXG00005020105) TIAL1 (ENSBIXG00005003333) #7 BAG3 (ENSBIXG00005020191) #8 INPP5F (ENSBIXG00005020287) #9 MCMBP (ENSBIXG00005020337) #10 SEC23IP (ENSBIXG00005003449) #11 PLPP4 (ENSBIXG00005020504) #12 WDR11 (ENSBIXG00005003481) #13 FGFR2 (ENSBIXG00005003546) #14 ATE1 (ENSBIXG00005021194) #15 NSMCE4A (ENSBIXG00005021235) #17 TACC2 (ENSBIXG00005003615) #18 BTBD16 (ENSBIXG00005003629) #19 PLEKHA1 (ENSBIXG00005021579) #20 HTRA1 (ENSBIXG00005021640) #21 ENSBIXG00005021652 #22 ENSBIXG00005021747 #22 ENSBIXG00005021776 #22 ENSBIXG00005021850 #23 ENSBIXG00005021867 #23 ENSBIXG00005021940 #23 C10orf120 (ENSBIXG00005021964) #24 ENSBIXG00005007366 #26 ENSBIXG00005003736 #30 ENSBIXG00005022065 #31 ENSBIXG00005022073 #30 ENSBIXG00005022094 #31 PSTK (ENSBIXG00005007367) #32 IKZF5 (ENSBIXG00005022167) #33 ACADSB (ENSBIXG00005003788) #34 HMX3 (ENSBIXG00005022277) #35 Hybrid Bos Indicus MODERN SPECIES 18 BAG3 (ENSBIXG00005020191) #8 INPP5F (ENSBIXG00005020287) #9 MCMBP (ENSBIXG00005020337) #10 SEC23IP (ENSBIXG00005003449) #11 PLPP4 (ENSBIXG00005020504) #12 WDR11 (ENSBIXG00005003481) #13 FGFR2 (ENSBIXG00005003546) #14 ATE1 (ENSBIXG00005021194) #15 NSMCE4A (ENSBIXG00005021235) #17 TACC2 (ENSBIXG00005003615) #18 BTBD16 (ENSBIXG00005003629) #19 PLEKHA1 (ENSBIXG00005021579) #20 HTRA1 (ENSBIXG00005021640) #21 ENSBIXG00005021652 #22 ENSBIXG00005021747 #22 ENSBIXG00005021776 #22 ENSBIXG00005021850 #23 ENSBIXG00005021867 #23 ENSBIXG00005021940 #23 C10orf120 (ENSBIXG00005021964) #24 ENSBIXG00005007366 #26 ENSBIXG00005003736 #30 ENSBIXG00005022065 #31 ENSBIXG00005022073 #30 ENSBIXG00005022094 #31 PSTK (ENSBIXG00005007367) #32 IKZF5 (ENSBIXG00005022167) #33 ACADSB (ENSBIXG00005003788) #34 HMX3 (ENSBIXG00005022277) #35 HMX2 (ENSBIXG00005003794) #36 BUB3 (ENSBIXG00005022455) #37 Hybrid Bos Indicus MODERN SPECIES 18 TIAL1 (ENSBIXG00005003333) #7 BAG3 (ENSBIXG00005020191) #8 INPP5F (ENSBIXG00005020287) #9 MCMBP (ENSBIXG00005020337) #10 SEC23IP (ENSBIXG00005003449) #11 PLPP4 (ENSBIXG00005020504) #12 WDR11 (ENSBIXG00005003481) #13 FGFR2 (ENSBIXG00005003546) #14 ATE1 (ENSBIXG00005021194) #15 NSMCE4A (ENSBIXG00005021235) #17 TACC2 (ENSBIXG00005003615) #18 BTBD16 (ENSBIXG00005003629) #19 PLEKHA1 (ENSBIXG00005021579) #20 HTRA1 (ENSBIXG00005021640) #21 ENSBIXG00005021652 #22 ENSBIXG00005021747 #22 ENSBIXG00005021776 #22 ENSBIXG00005021850 #23 ENSBIXG00005021867 #23 ENSBIXG00005021940 #23 C10orf120 (ENSBIXG00005021964) #24 ENSBIXG00005007366 #26 ENSBIXG00005003736 #30 ENSBIXG00005022065 #31 ENSBIXG00005022073 #30 ENSBIXG00005022094 #31 PSTK (ENSBIXG00005007367) #32 IKZF5 (ENSBIXG00005022167) #33 ACADSB (ENSBIXG00005003788) #34 HMX3 (ENSBIXG00005022277) #35 HMX2 (ENSBIXG00005003794) #36 Cetacea ANCESTRAL SPECIES 15 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000166688.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00940000154277.a.b.b.m.a.b ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 ENSGT00530000063371.B Blue whale MODERN SPECIES 7 ENSBMSG00010012993 INPP5F (ENSBMSG00010012966) #9 ENSBMSG00010012916 MCMBP (ENSBMSG00010012893) #10 SEC23IP (ENSBMSG00010012870) #11 PLPP4 (ENSBMSG00010012851) #12 WDR11 (ENSBMSG00010012814) #13 FGFR2 (ENSBMSG00010012623) #14 ATE1 (ENSBMSG00010017265) #15 NSMCE4A (ENSBMSG00010017199) #17 ENSBMSG00010015526 #18 BTBD16 (ENSBMSG00010015231) #19 PLEKHA1 (ENSBMSG00010015154) #20 HTRA1 (ENSBMSG00010015062) #21 C10orf120 (ENSBMSG00010015033) #24 ENSBMSG00010014864 #22 ENSBMSG00010014827 ENSBMSG00010014809 #30 ENSBMSG00010014794 #31 ENSBMSG00010014768 #30 ENSBMSG00010014749 #31 PSTK (ENSBMSG00010014723) #32 IKZF5 (ENSBMSG00010014703) #33 ENSBMSG00010014664 #34 HMX3 (ENSBMSG00010014645) #35 HMX2 (ENSBMSG00010014617) #36 BUB3 (ENSBMSG00010014520) #37 ENSBMSG00010014482 GPR26 (ENSBMSG00010014443) CPXM2 (ENSBMSG00010014404) CHST15 (ENSBMSG00010014379) Odontoceti ANCESTRAL SPECIES 14 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00940000166688.a ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00390000005104.j.b ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00390000006865.j.b ENSGT00940000154277.a.b.b.m.a.b ENSGT00630000089895 ENSGT00940000162535 Sperm whale MODERN SPECIES 12 ENSPCTG00005021949 INPP5F (ENSPCTG00005021967) #9 ENSPCTG00005022003 MCMBP (ENSPCTG00005022006) #10 SEC23IP (ENSPCTG00005022014) #11 ENSPCTG00005022029 ENSPCTG00005022034 PLPP4 (ENSPCTG00005022038) #12 ENSPCTG00005022049 WDR11 (ENSPCTG00005022064) #13 FGFR2 (ENSPCTG00005022152) #14 ATE1 (ENSPCTG00005022336) #15 ENSPCTG00005022356 #17 PLEKHA1 (ENSPCTG00005022364) #20 ENSPCTG00005022367 #21 ENSPCTG00005022368 #22 C10orf120 (ENSPCTG00005022369) #24 ENSPCTG00005022370 #31 ENSPCTG00005004457 #31 PSTK (ENSPCTG00005004477) #32 IKZF5 (ENSPCTG00005004486) #33 ACADSB (ENSPCTG00005004501) #34 HMX3 (ENSPCTG00005004538) #35 HMX2 (ENSPCTG00005004556) #36 BUB3 (ENSPCTG00005004599) #37 ENSPCTG00005004662 GPR26 (ENSPCTG00005004687) CPXM2 (ENSPCTG00005004720) CHST15 (ENSPCTG00005004768) ENSPCTG00005004794 FAM53B (ENSPCTG00005004807) Odontoceti_a ANCESTRAL SPECIES 11 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00940000166688.a ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000163005.b #30 ENSGT00390000017384.fb.b #31 ENSGT00940000163005.a #30 ENSGT00390000017384.fb.a #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00390000005104.j.b ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Dolphin MODERN SPECIES 583 BTBD16 (ENSTTRG00000005150) #19 PLEKHA1 (ENSTTRG00000005204) #20 HTRA1 (ENSTTRG00000005241) #21 ENSTTRG00000005254 #22 Odontoceti_b ANCESTRAL SPECIES 14 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00940000166688.a ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000163005.b #30 ENSGT00390000017384.fb.b #31 ENSGT00940000163005.a #30 ENSGT00390000017384.fb.a #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00390000005104.j.b ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Vaquita DUPLICATION Vaquita MODERN SPECIES 7 BAG3 (ENSPSNG00000022114) #8 INPP5F (ENSPSNG00000022147) #9 ENSPSNG00000022181 MCMBP (ENSPSNG00000022194) #10 SEC23IP (ENSPSNG00000022208) #11 PLPP4 (ENSPSNG00000022236) #12 WDR11 (ENSPSNG00000022247) #13 FGFR2 (ENSPSNG00000022313) #14 ATE1 (ENSPSNG00000022367) #15 NSMCE4A (ENSPSNG00000022375) #17 ENSPSNG00000022404 #18 ENSPSNG00000022440 #18 BTBD16 (ENSPSNG00000022446) #19 PLEKHA1 (ENSPSNG00000022463) #20 HTRA1 (ENSPSNG00000022472) #21 ENSPSNG00000022481 #22 ENSPSNG00000022486 #22 C10orf120 (ENSPSNG00000022490) #24 ENSPSNG00000022493 #30 ENSPSNG00000022495 #31 ENSPSNG00000022497 #30 ENSPSNG00000022499 #31 PSTK (ENSPSNG00000022505) #32 IKZF5 (ENSPSNG00000022509) #33 ACADSB (ENSPSNG00000022512) #34 HMX3 (ENSPSNG00000022517) #35 BUB3 (ENSPSNG00000022526) #37 ENSPSNG00000004804 GPR26 (ENSPSNG00000004875) CPXM2 (ENSPSNG00000004901) CHST15 (ENSPSNG00000004925) Vaquita MODERN SPECIES 7 INPP5F (ENSPSNG00000022147) #9 ENSPSNG00000022181 MCMBP (ENSPSNG00000022194) #10 SEC23IP (ENSPSNG00000022208) #11 PLPP4 (ENSPSNG00000022236) #12 WDR11 (ENSPSNG00000022247) #13 FGFR2 (ENSPSNG00000022313) #14 ATE1 (ENSPSNG00000022367) #15 NSMCE4A (ENSPSNG00000022375) #17 ENSPSNG00000022404 #18 ENSPSNG00000022440 #18 BTBD16 (ENSPSNG00000022446) #19 PLEKHA1 (ENSPSNG00000022463) #20 HTRA1 (ENSPSNG00000022472) #21 ENSPSNG00000022481 #22 ENSPSNG00000022486 #22 C10orf120 (ENSPSNG00000022490) #24 ENSPSNG00000022493 #30 ENSPSNG00000022495 #31 ENSPSNG00000022497 #30 ENSPSNG00000022499 #31 PSTK (ENSPSNG00000022505) #32 IKZF5 (ENSPSNG00000022509) #33 ACADSB (ENSPSNG00000022512) #34 HMX3 (ENSPSNG00000022517) #35 BUB3 (ENSPSNG00000022526) #37 ENSPSNG00000004804 GPR26 (ENSPSNG00000004875) CPXM2 (ENSPSNG00000004901) CHST15 (ENSPSNG00000004925) ENSPSNG00000004944 Monodontidae ANCESTRAL SPECIES 14 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000166688.a ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00390000017384.gb #31 ENSGT00390000017384.fb.a #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00390000005104.j.b ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00390000006865.j.b ENSGT00940000154277.a.b.b.m.a.b Narwhal MODERN SPECIES 311 BAG3 (ENSMMNG00015020314) #8 INPP5F (ENSMMNG00015020349) #9 ENSMMNG00015020417 MCMBP (ENSMMNG00015020433) #10 ENSMMNG00015020452 SEC23IP (ENSMMNG00015020467) #11 PLPP4 (ENSMMNG00015020521) #12 WDR11 (ENSMMNG00015020551) #13 FGFR2 (ENSMMNG00015020685) #14 ATE1 (ENSMMNG00015020901) #15 NSMCE4A (ENSMMNG00015020951) #17 ENSMMNG00015021035 #18 BTBD16 (ENSMMNG00015021175) #19 PLEKHA1 (ENSMMNG00015021236) #20 HTRA1 (ENSMMNG00015021277) #21 ENSMMNG00015021290 #22 C10orf120 (ENSMMNG00015021309) #24 ENSMMNG00015021326 #30 ENSMMNG00015021338 #30 PSTK (ENSMMNG00015021353) #32 IKZF5 (ENSMMNG00015021364) #33 ACADSB (ENSMMNG00015021378) #34 HMX3 (ENSMMNG00015021392) #35 HMX2 (ENSMMNG00015021402) #36 BUB3 (ENSMMNG00015021424) #37 ENSMMNG00015021458 GPR26 (ENSMMNG00015021467) CPXM2 (ENSMMNG00015021491) CHST15 (ENSMMNG00015021516) ENSMMNG00015021529 ENSMMNG00015021538 Suina ANCESTRAL SPECIES 6 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112.c.f #23 ENSGT00390000012112.d #23 ENSGT00390000012112.c.e.a #23 ENSGT00390000012112.c.e.b #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000163005.b #30 ENSGT00940000163005.a #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Pig MODERN SPECIES 5 INPP5F (ENSSSCG00000010687) #9 MCMBP (ENSSSCG00000010688) #10 ENSSSCG00000056743 SEC23IP (ENSSSCG00000010690) #11 PLPP4 (ENSSSCG00000010691) #12 WDR11 (ENSSSCG00000010692) #13 ENSSSCG00000041462 FGFR2 (ENSSSCG00000010698) #14 ATE1 (ENSSSCG00000010699) #15 ENSSSCG00000057767 NSMCE4A (ENSSSCG00000010700) #17 TACC2 (ENSSSCG00000037530) #18 BTBD16 (ENSSSCG00000010701) #19 PLEKHA1 (ENSSSCG00000010702) #20 HTRA1 (ENSSSCG00000010703) #21 ENSSSCG00000055799 #22 ENSSSCG00000049231 AWN (ENSSSCG00000002980) #23 ENSSSCG00000021947 #23 PSP-II (ENSSSCG00000061335) #23 PSP-I (ENSSSCG00000002978) #23 SPMI (ENSSSCG00000002977) #23 C14H10orf120 (ENSSSCG00000010717) #24 ENSSSCG00000010718 #26 ENSSSCG00000049267 #26 ENSSSCG00000051569 #30 ENSSSCG00000010719 #31 ENSSSCG00000058782 #30 ENSSSCG00000023865 #31 PSTK (ENSSSCG00000010721) #32 IKZF5 (ENSSSCG00000023565) #33 Chacoan peccary MODERN SPECIES 955 PLPP4 (ENSCWAG00000018014) #12 ENSCWAG00000017992 WDR11 (ENSCWAG00000017961) #13 FGFR2 (ENSCWAG00000013844) #14 ATE1 (ENSCWAG00000013413) #15 NSMCE4A (ENSCWAG00000013284) #17 ENSCWAG00000011139 #18 BTBD16 (ENSCWAG00000010937) #19 PLEKHA1 (ENSCWAG00000010671) #20 HTRA1 (ENSCWAG00000010613) #21 ENSCWAG00000010416 #23 ENSCWAG00000010366 #23 ENSCWAG00000010277 #23 ENSCWAG00000009916 #23 C10orf120 (ENSCWAG00000009823) #24 ENSCWAG00000009129 #22 ENSCWAG00000009087 #30 C10orf88 (ENSCWAG00000018230) #31 PSTK (ENSCWAG00000018180) #32 IKZF5 (ENSCWAG00000018145) #33 ACADSB (ENSCWAG00000018050) #34 HMX3 (ENSCWAG00000018030) #35 HMX2 (ENSCWAG00000018003) #36 BUB3 (ENSCWAG00000017831) #37 CPXM2 (ENSCWAG00000017772) CHST15 (ENSCWAG00000017720) OAT (ENSCWAG00000017679) NKX1-2 (ENSCWAG00000017640) LHPP (ENSCWAG00000017585) FAM53B (ENSCWAG00000017561) ENSCWAG00000017539 Laurasiatheria_b ANCESTRAL SPECIES 15 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00390000005511 #24 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00940000162108.tb #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384 #31 ENSGT00940000163005.a #30 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Laurasiatheria_c ANCESTRAL SPECIES 15 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384 #31 ENSGT00940000163005.a #30 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Chiroptera ANCESTRAL SPECIES 6 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447.r #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384 #31 ENSGT00940000163005.a #30 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Microchiroptera ANCESTRAL SPECIES 5 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447.r #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Microbat MODERN SPECIES 2138 ENSMLUG00000023051 #22 ENSMLUG00000028238 Greater horseshoe bat MODERN SPECIES 7 TIAL1 (ENSRFEG00010012554) #7 BAG3 (ENSRFEG00010012499) #8 INPP5F (ENSRFEG00010012275) #9 MCMBP (ENSRFEG00010012192) #10 SEC23IP (ENSRFEG00010012086) #11 PLPP4 (ENSRFEG00010011968) #12 WDR11 (ENSRFEG00010011888) #13 FGFR2 (ENSRFEG00010011408) #14 ATE1 (ENSRFEG00010011030) #15 ENSRFEG00010010986 #16 NSMCE4A (ENSRFEG00010010935) #17 TACC2 (ENSRFEG00010010381) #18 BTBD16 (ENSRFEG00010010148) #19 PLEKHA1 (ENSRFEG00010010055) #20 HTRA1 (ENSRFEG00010010004) #21 ENSRFEG00010009865 #22 C10orf120 (ENSRFEG00010009794) #24 ENSRFEG00010009653 #26 CUZD1 (ENSRFEG00010009612) #29 ENSRFEG00010009592 #31 ENSRFEG00010009483 #31 PSTK (ENSRFEG00010009389) #32 IKZF5 (ENSRFEG00010009357) #33 ENSRFEG00010009328 #34 HMX3 (ENSRFEG00010009301) #35 HMX2 (ENSRFEG00010009282) #36 BUB3 (ENSRFEG00010009105) #37 GPR26 (ENSRFEG00010009057) CPXM2 (ENSRFEG00010009013) CHST15 (ENSRFEG00010008970) ENSRFEG00010008862 Megabat MODERN SPECIES 2926 ENSPVAG00000015546 #22 Equus ANCESTRAL SPECIES 9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00390000012112.e #23 ENSGT00390000012112.f #23 ENSGT00390000005511 #24 ENSGT00950000183145.E #22 ENSGT00940000162108.tb #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b.a #30 ENSGT00940000163005.b.b #30 ENSGT00390000017384.kb #31 ENSGT00940000163005.a #30 ENSGT00390000017384.jb #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Donkey DUPLICATION Donkey MODERN SPECIES 11 HMX2 (ENSEASG00005033822) #36 HMX3 (ENSEASG00005013491) #35 ACADSB (ENSEASG00005013489) #34 IKZF5 (ENSEASG00005024598) #33 PSTK (ENSEASG00005013485) #32 ENSEASG00005013480 #31 ENSEASG00005013481 #30 ENSEASG00005032712 #31 ENSEASG00005028447 #30 CUZD1 (ENSEASG00005013476) #29 ENSEASG00005032296 ENSEASG00005013472 #26 ENSEASG00005037253 #22 C10orf120 (ENSEASG00005033462) #24 ENSEASG00005024831 #23 ENSEASG00005035091 #22 ENSEASG00005034128 #23 ENSEASG00005014371 ENSEASG00005014375 #21 PLEKHA1 (ENSEASG00005014376) #20 BTBD16 (ENSEASG00005037072) #19 TACC2 (ENSEASG00005014393) #18 NSMCE4A (ENSEASG00005014412) #17 ENSEASG00005014414 #16 ATE1 (ENSEASG00005014421) #15 FGFR2 (ENSEASG00005014428) #14 WDR11 (ENSEASG00005014435) #13 PLPP4 (ENSEASG00005014441) #12 SEC23IP (ENSEASG00005014443) #11 MCMBP (ENSEASG00005014444) #10 ENSEASG00005038260 Donkey DUPLICATION Donkey MODERN SPECIES 11 PLPP4 (ENSEASG00005014441) #12 WDR11 (ENSEASG00005014435) #13 FGFR2 (ENSEASG00005014428) #14 ATE1 (ENSEASG00005014421) #15 ENSEASG00005014414 #16 NSMCE4A (ENSEASG00005014412) #17 TACC2 (ENSEASG00005014393) #18 BTBD16 (ENSEASG00005037072) #19 PLEKHA1 (ENSEASG00005014376) #20 ENSEASG00005014375 #21 ENSEASG00005014371 ENSEASG00005034128 #23 ENSEASG00005035091 #22 ENSEASG00005024831 #23 C10orf120 (ENSEASG00005033462) #24 ENSEASG00005037253 #22 ENSEASG00005013472 #26 ENSEASG00005032296 CUZD1 (ENSEASG00005013476) #29 ENSEASG00005028447 #30 ENSEASG00005032712 #31 ENSEASG00005013481 #30 ENSEASG00005013480 #31 PSTK (ENSEASG00005013485) #32 IKZF5 (ENSEASG00005024598) #33 ACADSB (ENSEASG00005013489) #34 HMX3 (ENSEASG00005013491) #35 HMX2 (ENSEASG00005033822) #36 BUB3 (ENSEASG00005013498) #37 GPR26 (ENSEASG00005013501) CPXM2 (ENSEASG00005013580) Donkey MODERN SPECIES 11 ENSEASG00005000061 PRKD1 (ENSEASG00005000023) ENSEASG00005018653 ENSEASG00005018652 ENSEASG00005018651 ENSEASG00005030567 ENSEASG00005025548 ENSEASG00005018648 ENSEASG00005030376 ENSEASG00005026647 ENSEASG00005018535 ENSEASG00005026776 ENSEASG00005013845 ENSEASG00005015114 ENSEASG00005018539 ENSEASG00005014373 #22 ENSEASG00005036308 ENSEASG00005034020 ENSEASG00005010386 ENSEASG00005018531 ENSEASG00005022749 ENSEASG00005018553 ENSEASG00005013861 ENSEASG00005007501 ENSEASG00005011734 ENSEASG00005012336 ENSEASG00005026663 ENSEASG00005025627 ENSEASG00005015220 ENSEASG00005012328 ENSEASG00005012295 Horse DUPLICATION Horse DUPLICATION Horse MODERN SPECIES 398 ENSECAG00000028484 #22 Horse MODERN SPECIES 385 ENSECAG00000028966 #22 Horse MODERN SPECIES SEC23IP (ENSECAG00000000536) #11 PLPP4 (ENSECAG00000023526) #12 WDR11 (ENSECAG00000019673) #13 FGFR2 (ENSECAG00000013960) #14 ATE1 (ENSECAG00000012383) #15 NSMCE4A (ENSECAG00000016651) #17 BTBD16 (ENSECAG00000008814) #19 TACC2 (ENSECAG00000018280) #18 PLEKHA1 (ENSECAG00000014908) #20 HTRA1 (ENSECAG00000009990) #21 ENSECAG00000009596 #23 ENSECAG00000060192 ##22 ENSECAG00000006313 #23 ENSECAG00000046082 C1H10orf120 (ENSECAG00000002143) #24 ENSECAG00000009186 #22 ENSECAG00000019510 #26 ENSECAG00000014886 #30 CUZD1 (ENSECAG00000014944) #29 ENSECAG00000013380 #31 ENSECAG00000040992 #30 ENSECAG00000012505 #31 PSTK (ENSECAG00000011238) #32 IKZF5 (ENSECAG00000006987) #33 ENSECAG00000017638 #34 HMX3 (ENSECAG00000037274) #35 HMX2 (ENSECAG00000012690) #36 BUB3 (ENSECAG00000010047) #37 GPR26 (ENSECAG00000008245) CPXM2 (ENSECAG00000024631) CHST15 (ENSECAG00000022078) Carnivora ANCESTRAL SPECIES 16 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb #31 ENSGT00940000163005.a #30 ENSGT00390000017384.ib #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Caniformia ANCESTRAL SPECIES 13 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb #31 ENSGT00940000163005.a #30 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Caniformia_b ANCESTRAL SPECIES 10 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00390000017384.hb #31 ENSGT00940000163005.a #30 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Ursidae ANCESTRAL SPECIES 5 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000166528.a.a ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955.d #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00390000017384.hb #31 ENSGT00940000163005.a #30 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Giant Panda MODERN SPECIES 16 BAG3 (ENSAMEG00000010175) #8 INPP5F (ENSAMEG00000010186) #9 MCMBP (ENSAMEG00000010208) #10 ENSAMEG00000001122 SEC23IP (ENSAMEG00000010251) #11 PLPP4 (ENSAMEG00000010299) #12 WDR11 (ENSAMEG00000010302) #13 FGFR2 (ENSAMEG00000010959) #14 ATE1 (ENSAMEG00000010918) #15 ENSAMEG00000010913 #16 NSMCE4A (ENSAMEG00000010897) #17 TACC2 (ENSAMEG00000010858) #18 BTBD16 (ENSAMEG00000010849) #19 PLEKHA1 (ENSAMEG00000024104) #20 HTRA1 (ENSAMEG00000024939) #21 ENSAMEG00000008992 #22 ENSAMEG00000004692 #24 ENSAMEG00000004685 #31 ENSAMEG00000030562 #30 ENSAMEG00000004671 #32 ENSAMEG00000004665 #33 ACADSB (ENSAMEG00000004639) #34 HMX3 (ENSAMEG00000024653) #35 HMX2 (ENSAMEG00000009520) #36 BUB3 (ENSAMEG00000009521) #37 GPR26 (ENSAMEG00000009542) CPXM2 (ENSAMEG00000009550) CHST15 (ENSAMEG00000010183) OAT (ENSAMEG00000010160) LHPP (ENSAMEG00000010149) FAM53B (ENSAMEG00000004200) Ursus ANCESTRAL SPECIES 7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000166528.a.a ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955.d #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000154525.b.a #29 ENSGT00390000017384.hb.b #31 ENSGT00390000017384.hb.a #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 American black bear MODERN SPECIES 812 ENSUAMG00000018234 #18 ENSUAMG00000018235 #18 BTBD16 (ENSUAMG00000018236) #19 PLEKHA1 (ENSUAMG00000018237) #20 HTRA1 (ENSUAMG00000018238) #21 ENSUAMG00000018239 #22 Polar bear DUPLICATION Polar bear MODERN SPECIES 92 ENSUMAG00000003871 SEC23IP (ENSUMAG00000003896) #11 PLPP4 (ENSUMAG00000004036) #12 ENSUMAG00000004063 WDR11 (ENSUMAG00000004075) #13 ENSUMAG00000004111 #14 ENSUMAG00000004366 #14 ATE1 (ENSUMAG00000004457) #15 ENSUMAG00000004468 #16 NSMCE4A (ENSUMAG00000004478) #17 TACC2 (ENSUMAG00000004546) #18 BTBD16 (ENSUMAG00000004944) #19 PLEKHA1 (ENSUMAG00000004973) #20 HTRA1 (ENSUMAG00000004978) #21 ENSUMAG00000004981 #22 ENSUMAG00000004990 #22 C10orf120 (ENSUMAG00000005005) #24 ENSUMAG00000005031 #26 ENSUMAG00000005147 #25 CUZD1 (ENSUMAG00000005153) #29 ENSUMAG00000005171 #31 ENSUMAG00000005180 #31 PSTK (ENSUMAG00000005193) #32 IKZF5 (ENSUMAG00000005198) #33 ACADSB (ENSUMAG00000005207) #34 BUB3 (ENSUMAG00000005215) #37 CPXM2 (ENSUMAG00000005241) CHST15 (ENSUMAG00000005326) OAT (ENSUMAG00000005337) LHPP (ENSUMAG00000005342) FAM53B (ENSUMAG00000005371) Polar bear MODERN SPECIES 92 MCMBP (ENSUMAG00000003425) #10 ENSUMAG00000003871 SEC23IP (ENSUMAG00000003896) #11 PLPP4 (ENSUMAG00000004036) #12 ENSUMAG00000004063 WDR11 (ENSUMAG00000004075) #13 ENSUMAG00000004111 #14 ENSUMAG00000004366 #14 ATE1 (ENSUMAG00000004457) #15 ENSUMAG00000004468 #16 NSMCE4A (ENSUMAG00000004478) #17 TACC2 (ENSUMAG00000004546) #18 BTBD16 (ENSUMAG00000004944) #19 PLEKHA1 (ENSUMAG00000004973) #20 HTRA1 (ENSUMAG00000004978) #21 ENSUMAG00000004981 #22 ENSUMAG00000004990 #22 C10orf120 (ENSUMAG00000005005) #24 ENSUMAG00000005031 #26 ENSUMAG00000005147 #25 CUZD1 (ENSUMAG00000005153) #29 ENSUMAG00000005171 #31 ENSUMAG00000005180 #31 PSTK (ENSUMAG00000005193) #32 IKZF5 (ENSUMAG00000005198) #33 ACADSB (ENSUMAG00000005207) #34 BUB3 (ENSUMAG00000005215) #37 CPXM2 (ENSUMAG00000005241) CHST15 (ENSUMAG00000005326) OAT (ENSUMAG00000005337) LHPP (ENSUMAG00000005342) Mustelinae ANCESTRAL SPECIES 40 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00390000017384.hb #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Ferret MODERN SPECIES 193 MCMBP (ENSMPUG00000003036) #10 SEC23IP (ENSMPUG00000003023) #11 PLPP4 (ENSMPUG00000003005) #12 WDR11 (ENSMPUG00000002997) #13 ENSMPUG00000002994 FGFR2 (ENSMPUG00000002989) #14 ENSMPUG00000002985 ENSMPUG00000002979 ATE1 (ENSMPUG00000002968) #15 NSMCE4A (ENSMPUG00000002960) #17 ENSMPUG00000002953 #18 ENSMPUG00000002944 #18 BTBD16 (ENSMPUG00000002903) #19 PLEKHA1 (ENSMPUG00000002899) #20 HTRA1 (ENSMPUG00000002895) #21 ENSMPUG00000002892 #22 ENSMPUG00000002887 C10orf120 (ENSMPUG00000002881) #24 ENSMPUG00000002877 ENSMPUG00000002820 #26 CUZD1 (ENSMPUG00000002814) #29 ENSMPUG00000019258 ENSMPUG00000002809 #31 ENSMPUG00000002801 #31 PSTK (ENSMPUG00000002790) #32 IKZF5 (ENSMPUG00000002786) #33 ACADSB (ENSMPUG00000002783) #34 HMX3 (ENSMPUG00000002780) #35 HMX2 (ENSMPUG00000002778) #36 BUB3 (ENSMPUG00000002774) #37 ENSMPUG00000002770 American mink MODERN SPECIES 35 TIAL1 (ENSNVIG00000005133) #7 BAG3 (ENSNVIG00000005182) #8 INPP5F (ENSNVIG00000005245) #9 MCMBP (ENSNVIG00000005366) #10 SEC23IP (ENSNVIG00000005465) #11 PLPP4 (ENSNVIG00000005960) #12 ENSNVIG00000005981 WDR11 (ENSNVIG00000006011) #13 FGFR2 (ENSNVIG00000006193) #14 ATE1 (ENSNVIG00000006880) #15 NSMCE4A (ENSNVIG00000006954) #17 TACC2 (ENSNVIG00000006963) #18 BTBD16 (ENSNVIG00000007104) #19 PLEKHA1 (ENSNVIG00000007135) #20 HTRA1 (ENSNVIG00000007206) #21 ENSNVIG00000007221 #22 C10orf120 (ENSNVIG00000007718) #24 CUZD1 (ENSNVIG00000007746) #29 ENSNVIG00000007783 #31 PSTK (ENSNVIG00000007798) #32 IKZF5 (ENSNVIG00000007802) #33 ACADSB (ENSNVIG00000007815) #34 HMX3 (ENSNVIG00000007846) #35 HMX2 (ENSNVIG00000007861) #36 BUB3 (ENSNVIG00000007873) #37 GPR26 (ENSNVIG00000007954) CPXM2 (ENSNVIG00000007971) CHSTF (ENSNVIG00000008037) OAT (ENSNVIG00000008116) NKX1-2 (ENSNVIG00000008189) LHPP (ENSNVIG00000008217) Canidae ANCESTRAL SPECIES 16 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000163657 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb.f #31 ENSGT00390000017384.hb.e #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Canis_lupus DUPLICATION Canis_lupus DUPLICATION Canis_lupus ANCESTRAL SPECIES 20 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00390000004380.e.a.a ENSGT00940000163657.f ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E.kb.b #22 ENSGT00950000183145.E.kb.a #22 ENSGT00950000183145.B.a.b ##22 ENSGT00950000183145.E.lb #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb.f #31 ENSGT00390000017384.hb.e #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Dog MODERN SPECIES 20 MCMBP (ENSCAFG00845017945) #10 SEC23IP (ENSCAFG00845018243) #11 ENSCAFG00845018569 ENSCAFG00845018618 PLPP4 (ENSCAFG00845018703) #12 WDR11 (ENSCAFG00845018912) #13 FGFR2 (ENSCAFG00845019372) #14 ATE1 (ENSCAFG00845020272) #15 ATE1OS (ENSCAFG00845020507) #16 NSMCE4A (ENSCAFG00845020544) #17 TACC2 (ENSCAFG00845020783) #18 BTBD16 (ENSCAFG00845021873) #19 PLEKHA1 (ENSCAFG00845022104) #20 HTRA1 (ENSCAFG00845022222) #21 ENSCAFG00845022418 #22 ENSCAFG00845023612 #22 ENSCAFG00845023643 ##22 C10orf120 (ENSCAFG00845023695) #24 ENSCAFG00845023783 #26 CUZD1 (ENSCAFG00845024055) #29 ENSCAFG00845024126 #30 ENSCAFG00845024159 #31 ENSCAFG00845024221 #31 PSTK (ENSCAFG00845024287) #32 IKZF5 (ENSCAFG00845024334) #33 ACADSB (ENSCAFG00845024388) #34 HMX3 (ENSCAFG00845024473) #35 HMX2 (ENSCAFG00845024515) #36 PSTK (ENSCAFG00845024586) #37 GPR26 (ENSCAFG00845024706) CHST15 (ENSCAFG00845024829) Dingo MODERN SPECIES 165 SEC23IP (ENSCAFG00020014659) #11 ENSCAFG00020014663 ENSCAFG00020014666 PLPP4 (ENSCAFG00020014668) #12 WDR11 (ENSCAFG00020014683) #13 FGFR2 (ENSCAFG00020014779) #14 ATE1 (ENSCAFG00020014791) #15 ENSCAFG00020014813 #16 ENSCAFG00020014819 #17 TACC2 (ENSCAFG00020014827) #18 BTBD16 (ENSCAFG00020015057) #19 PLEKHA1 (ENSCAFG00020015085) #20 HTRA1 (ENSCAFG00020015096) #21 ENSCAFG00020015148 #22 ENSCAFG00020015160 #22 ENSCAFG00020015167 #22 ENSCAFG00020015171 #22 C10orf120 (ENSCAFG00020015180) #24 ENSCAFG00020015184 #26 ENSCAFG00020015187 #26 ENSCAFG00020015189 #28 CUZD1 (ENSCAFG00020015193) #29 ENSCAFG00020015197 #31 ENSCAFG00020015204 #31 PSTK (ENSCAFG00020015208) #32 IKZF5 (ENSCAFG00020015212) #33 ACADSB (ENSCAFG00020015216) #34 HMX3 (ENSCAFG00020015221) #35 HMX2 (ENSCAFG00020015225) #36 BUB3 (ENSCAFG00020015234) #37 GPR26 (ENSCAFG00020015240) Canis_lupus ANCESTRAL SPECIES 20 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00390000004380.e.a.a ENSGT00940000163657.f ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E.kb.b #22 ENSGT00950000183145.E.kb.a #22 ENSGT00950000183145.B.a.b ##22 ENSGT00950000183145.E.lb #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb.f #31 ENSGT00390000017384.hb.e #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 Dog MODERN SPECIES 20 SEC23IP (ENSCAFG00845017286) #9 MCMBP (ENSCAFG00845017945) #10 SEC23IP (ENSCAFG00845018243) #11 ENSCAFG00845018569 ENSCAFG00845018618 PLPP4 (ENSCAFG00845018703) #12 WDR11 (ENSCAFG00845018912) #13 FGFR2 (ENSCAFG00845019372) #14 ATE1 (ENSCAFG00845020272) #15 ATE1OS (ENSCAFG00845020507) #16 NSMCE4A (ENSCAFG00845020544) #17 TACC2 (ENSCAFG00845020783) #18 BTBD16 (ENSCAFG00845021873) #19 PLEKHA1 (ENSCAFG00845022104) #20 HTRA1 (ENSCAFG00845022222) #21 ENSCAFG00845022418 #22 ENSCAFG00845023612 #22 ENSCAFG00845023643 ##22 C10orf120 (ENSCAFG00845023695) #24 ENSCAFG00845023783 #26 CUZD1 (ENSCAFG00845024055) #29 ENSCAFG00845024126 #30 ENSCAFG00845024159 #31 ENSCAFG00845024221 #31 PSTK (ENSCAFG00845024287) #32 IKZF5 (ENSCAFG00845024334) #33 ACADSB (ENSCAFG00845024388) #34 HMX3 (ENSCAFG00845024473) #35 HMX2 (ENSCAFG00845024515) #36 PSTK (ENSCAFG00845024586) #37 GPR26 (ENSCAFG00845024706) Canis_lupus ANCESTRAL SPECIES 20 ENSGT00390000004380.e.a.a ENSGT00940000163657.f ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E.kb.b #22 ENSGT00950000183145.E.kb.a #22 ENSGT00950000183145.B.a.b ##22 ENSGT00950000183145.E.lb #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb.f #31 ENSGT00390000017384.hb.e #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Dingo DUPLICATION Dingo MODERN SPECIES 165 MCMBP (ENSCAFG00020014655) #10 SEC23IP (ENSCAFG00020014659) #11 ENSCAFG00020014663 ENSCAFG00020014666 PLPP4 (ENSCAFG00020014668) #12 WDR11 (ENSCAFG00020014683) #13 FGFR2 (ENSCAFG00020014779) #14 ATE1 (ENSCAFG00020014791) #15 ENSCAFG00020014813 #16 ENSCAFG00020014819 #17 TACC2 (ENSCAFG00020014827) #18 BTBD16 (ENSCAFG00020015057) #19 PLEKHA1 (ENSCAFG00020015085) #20 HTRA1 (ENSCAFG00020015096) #21 ENSCAFG00020015148 #22 ENSCAFG00020015160 #22 ENSCAFG00020015167 #22 ENSCAFG00020015171 #22 C10orf120 (ENSCAFG00020015180) #24 ENSCAFG00020015184 #26 ENSCAFG00020015187 #26 ENSCAFG00020015189 #28 CUZD1 (ENSCAFG00020015193) #29 ENSCAFG00020015197 #31 ENSCAFG00020015204 #31 PSTK (ENSCAFG00020015208) #32 IKZF5 (ENSCAFG00020015212) #33 ACADSB (ENSCAFG00020015216) #34 HMX3 (ENSCAFG00020015221) #35 HMX2 (ENSCAFG00020015225) #36 BUB3 (ENSCAFG00020015234) #37 Dingo MODERN SPECIES 165 INPP5F (ENSCAFG00020013935) #9 MCMBP (ENSCAFG00020014655) #10 SEC23IP (ENSCAFG00020014659) #11 ENSCAFG00020014663 ENSCAFG00020014666 PLPP4 (ENSCAFG00020014668) #12 WDR11 (ENSCAFG00020014683) #13 FGFR2 (ENSCAFG00020014779) #14 ATE1 (ENSCAFG00020014791) #15 ENSCAFG00020014813 #16 ENSCAFG00020014819 #17 TACC2 (ENSCAFG00020014827) #18 BTBD16 (ENSCAFG00020015057) #19 PLEKHA1 (ENSCAFG00020015085) #20 HTRA1 (ENSCAFG00020015096) #21 ENSCAFG00020015148 #22 ENSCAFG00020015160 #22 ENSCAFG00020015167 #22 ENSCAFG00020015171 #22 C10orf120 (ENSCAFG00020015180) #24 ENSCAFG00020015184 #26 ENSCAFG00020015187 #26 ENSCAFG00020015189 #28 CUZD1 (ENSCAFG00020015193) #29 ENSCAFG00020015197 #31 ENSCAFG00020015204 #31 PSTK (ENSCAFG00020015208) #32 IKZF5 (ENSCAFG00020015212) #33 ACADSB (ENSCAFG00020015216) #34 HMX3 (ENSCAFG00020015221) #35 HMX2 (ENSCAFG00020015225) #36 Dingo MODERN SPECIES 165 ENSCAFG00020014663 ENSCAFG00020014666 PLPP4 (ENSCAFG00020014668) #12 WDR11 (ENSCAFG00020014683) #13 FGFR2 (ENSCAFG00020014779) #14 ATE1 (ENSCAFG00020014791) #15 ENSCAFG00020014813 #16 ENSCAFG00020014819 #17 TACC2 (ENSCAFG00020014827) #18 BTBD16 (ENSCAFG00020015057) #19 PLEKHA1 (ENSCAFG00020015085) #20 HTRA1 (ENSCAFG00020015096) #21 ENSCAFG00020015148 #22 ENSCAFG00020015160 #22 ENSCAFG00020015167 #22 ENSCAFG00020015171 #22 C10orf120 (ENSCAFG00020015180) #24 ENSCAFG00020015184 #26 ENSCAFG00020015187 #26 ENSCAFG00020015189 #28 CUZD1 (ENSCAFG00020015193) #29 ENSCAFG00020015197 #31 ENSCAFG00020015204 #31 PSTK (ENSCAFG00020015208) #32 IKZF5 (ENSCAFG00020015212) #33 ACADSB (ENSCAFG00020015216) #34 HMX3 (ENSCAFG00020015221) #35 HMX2 (ENSCAFG00020015225) #36 BUB3 (ENSCAFG00020015234) #37 GPR26 (ENSCAFG00020015240) CPXM2 (ENSCAFG00020015264) Red fox DUPLICATION Red fox MODERN SPECIES SEC23IP (ENSVVUG00000011215) #11 ENSVVUG00000011255 PLPP4 (ENSVVUG00000011275) #12 ENSVVUG00000011295 WDR11 (ENSVVUG00000011299) #13 FGFR2 (ENSVVUG00000011385) #14 ATE1 (ENSVVUG00000011469) #15 ENSVVUG00000011488 #16 NSMCE4A (ENSVVUG00000011499) #17 TACC2 (ENSVVUG00000011536) #18 BTBD16 (ENSVVUG00000011562) #19 PLEKHA1 (ENSVVUG00000011580) #20 HTRA1 (ENSVVUG00000011603) #21 ENSVVUG00000011630 ##22 ENSVVUG00000011639 #22 ENSVVUG00000011643 #22 Red fox MODERN SPECIES MCMBP (ENSVVUG00000011144) #10 SEC23IP (ENSVVUG00000011215) #11 ENSVVUG00000011255 PLPP4 (ENSVVUG00000011275) #12 ENSVVUG00000011295 WDR11 (ENSVVUG00000011299) #13 FGFR2 (ENSVVUG00000011385) #14 ATE1 (ENSVVUG00000011469) #15 ENSVVUG00000011488 #16 NSMCE4A (ENSVVUG00000011499) #17 TACC2 (ENSVVUG00000011536) #18 BTBD16 (ENSVVUG00000011562) #19 PLEKHA1 (ENSVVUG00000011580) #20 HTRA1 (ENSVVUG00000011603) #21 ENSVVUG00000011630 ##22 ENSVVUG00000011639 #22 ENSVVUG00000011643 #22 Felidae ANCESTRAL SPECIES 14 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.ib #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Panthera ANCESTRAL SPECIES 8 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.ib #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Tiger MODERN SPECIES 210 TIAL1 (ENSPTIG00000007899) #7 BAG3 (ENSPTIG00000009763) #8 INPP5F (ENSPTIG00000011407) #9 MCMBP (ENSPTIG00000014781) #10 SEC23IP (ENSPTIG00000017676) #11 PLPP4 (ENSPTIG00000018990) #12 WDR11 (ENSPTIG00000001166) #13 ENSPTIG00000007977 #14 ENSPTIG00000021238 #14 ATE1 (ENSPTIG00000021995) #15 NSMCE4A (ENSPTIG00000022082) #17 ENSPTIG00000022110 #18 BTBD16 (ENSPTIG00000014571) #19 PLEKHA1 (ENSPTIG00000015102) #20 ENSPTIG00000018456 #21 ENSPTIG00000019475 #22 C10orf120 (ENSPTIG00000021374) #24 ENSPTIG00000003767 #26 CUZD1 (ENSPTIG00000005962) #29 ENSPTIG00000007416 #30 Cat MODERN SPECIES 242 BAG3 (ENSFCAG00000023182) #8 INPP5F (ENSFCAG00000024040) #9 MCMBP (ENSFCAG00000014907) #10 SEC23IP (ENSFCAG00000014908) #11 PLPP4 (ENSFCAG00000042026) #12 WDR11 (ENSFCAG00000014314) #13 FGFR2 (ENSFCAG00000003692) #14 ATE1 (ENSFCAG00000027935) #15 TACC2 (ENSFCAG00000026479) #18 NSMCE4A (ENSFCAG00000003647) #17 BTBD16 (ENSFCAG00000003652) #19 PLEKHA1 (ENSFCAG00000023664) #20 HTRA1 (ENSFCAG00000003656) #21 ENSFCAG00000048419 ENSFCAG00000047757 ENSFCAG00000003657 #22 ENSFCAG00000026044 #26 C10orf120 (ENSFCAG00000035584) #24 ENSFCAG00000029545 #29 ENSFCAG00000041375 #30 ENSFCAG00000007571 #31 ENSFCAG00000030445 #31 PSTK (ENSFCAG00000027434) #32 IKZF5 (ENSFCAG00000041709) #33 ACADSB (ENSFCAG00000003421) #34 ENSFCAG00000048422 HMX3 (ENSFCAG00000041528) #35 HMX2 (ENSFCAG00000042782) #36 BUB3 (ENSFCAG00000024986) #37 ENSFCAG00000045983 CPXM2 (ENSFCAG00000013258) Atlantogenata ANCESTRAL SPECIES 118 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00940000164044 Xenarthra ANCESTRAL SPECIES 1385 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 Armadillo MODERN SPECIES 2176 PLEKHA1 (ENSDNOG00000043589) #20 HTRA1 (ENSDNOG00000016275) #21 ENSDNOG00000032820 #22 Afrotheria ANCESTRAL SPECIES 197 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00940000164044 Tenrec MODERN SPECIES 7820 ENSETEG00000001620 #22 Afrotheria_a ANCESTRAL SPECIES 203 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00940000164044 Elephant MODERN SPECIES 537 ENSLAFG00000003288 #18 BTBD16 (ENSLAFG00000003293) #19 PLEKHA1 (ENSLAFG00000007589) #20 HTRA1 (ENSLAFG00000007595) #21 ENSLAFG00000027577 #22 C10orf120 (ENSLAFG00000018686) #24 ENSLAFG00000001892 #26 CUZD1 (ENSLAFG00000001895) #29 ENSLAFG00000023240 #30 ENSLAFG00000018729 #31 ENSLAFG00000017108 ENSLAFG00000012377 #31 PSTK (ENSLAFG00000029030) #32 IKZF5 (ENSLAFG00000012381) #33 ACADSB (ENSLAFG00000004375) #34 HMX3 (ENSLAFG00000021892) #35 HMX2 (ENSLAFG00000012760) #36 BUB3 (ENSLAFG00000012753) #37 GPR26 (ENSLAFG00000008737) CPXM2 (ENSLAFG00000011034) Marsupialia ANCESTRAL SPECIES ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000157351.j ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00940000165188 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182946.d.a Opossum DUPLICATION Opossum MODERN SPECIES PLPP4 (ENSMODG00000008644) #12 ENSMODG00000008634 ENSMODG00000039409 WDR11 (ENSMODG00000008627) #13 FGFR2 (ENSMODG00000008525) #14 ENSMODG00000008447 ENSMODG00000036472 ENSMODG00000044877 ATE1 (ENSMODG00000008434) #15 ENSMODG00000008405 ENSMODG00000008327 #18 ENSMODG00000038482 #18 BTBD16 (ENSMODG00000008285) #19 PLEKHA1 (ENSMODG00000008263) #20 HTRA1 (ENSMODG00000008235) #21 ENSMODG00000008170 #22 ENSMODG00000007900 #24 ENSMODG00000007895 #22 ENSMODG00000040843 ##22 CUZD1 (ENSMODG00000007863) #29 C10orf88 (ENSMODG00000007814) #31 PSTK (ENSMODG00000007808) #32 IKZF5 (ENSMODG00000038834) #33 ACADSB (ENSMODG00000007778) #34 HMX3 (ENSMODG00000007552) #35 HMX2 (ENSMODG00000007548) #36 ENSMODG00000007542 #37 GPR26 (ENSMODG00000007533) CPXM2 (ENSMODG00000007502) CHST15 (ENSMODG00000007407) ENSMODG00000038857 Opossum MODERN SPECIES ENSMODG00000039409 WDR11 (ENSMODG00000008627) #13 FGFR2 (ENSMODG00000008525) #14 ENSMODG00000008447 ENSMODG00000036472 ENSMODG00000044877 ATE1 (ENSMODG00000008434) #15 ENSMODG00000008405 ENSMODG00000008327 #18 ENSMODG00000038482 #18 BTBD16 (ENSMODG00000008285) #19 PLEKHA1 (ENSMODG00000008263) #20 HTRA1 (ENSMODG00000008235) #21 ENSMODG00000008170 #22 ENSMODG00000007900 #24 ENSMODG00000007895 #22 ENSMODG00000040843 ##22 CUZD1 (ENSMODG00000007863) #29 C10orf88 (ENSMODG00000007814) #31 PSTK (ENSMODG00000007808) #32 IKZF5 (ENSMODG00000038834) #33 ACADSB (ENSMODG00000007778) #34 HMX3 (ENSMODG00000007552) #35 HMX2 (ENSMODG00000007548) #36 ENSMODG00000007542 #37 GPR26 (ENSMODG00000007533) CPXM2 (ENSMODG00000007502) CHST15 (ENSMODG00000007407) ENSMODG00000038857 ENSMODG00000024882 ENSMODG00000007358 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000157351.j ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Tasmanian devil MODERN SPECIES 1 INPP5F (ENSSHAG00000010978) #9 MCMBP (ENSSHAG00000010768) #10 SEC23IP (ENSSHAG00000010548) #11 PLPP4 (ENSSHAG00000022918) #12 ENSSHAG00000013721 WDR11 (ENSSHAG00000012828) #13 FGFR2 (ENSSHAG00000006217) #14 ATE1 (ENSSHAG00000028389) #15 ENSSHAG00000013127 #16 ENSSHAG00000012962 #17 ENSSHAG00000009993 #18 ENSSHAG00000011665 #18 BTBD16 (ENSSHAG00000010960) #19 PLEKHA1 (ENSSHAG00000024626) #20 HTRA1 (ENSSHAG00000009284) #21 ENSSHAG00000007803 #22 ENSSHAG00000007217 #24 ENSSHAG00000022182 #26 ENSSHAG00000023839 ##22 ENSSHAG00000028811 #29 ENSSHAG00000011736 #29 C10orf88 (ENSSHAG00000024427) #31 ENSSHAG00000030670 #32 IKZF5 (ENSSHAG00000011508) #33 ACADSB (ENSSHAG00000000928) #34 HMX3 (ENSSHAG00000031226) #35 HMX2 (ENSSHAG00000029091) #36 BUB3 (ENSSHAG00000010372) #37 GPR26 (ENSSHAG00000030669) CPXM2 (ENSSHAG00000023947) ENSSHAG00000009520 Diprotodontia ANCESTRAL SPECIES 6 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000157351.j ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Diprotodontia_a ANCESTRAL SPECIES 7 ENSGT00940000159204.e #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000157351.j ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.f #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 koala MODERN SPECIES 367 ATE1 (ENSPCIG00000001110) #15 ENSPCIG00000001192 #16 ENSPCIG00000001203 #17 ENSPCIG00000001234 #18 ENSPCIG00000035481 #18 BTBD16 (ENSPCIG00000001286) #19 PLEKHA1 (ENSPCIG00000001321) #20 HTRA1 (ENSPCIG00000001326) #21 ENSPCIG00000007807 #22 Common wonbat MODERN SPECIES 1067 ENSVURG00010017263 #8 INPP5F (ENSVURG00010017282) #9 MCMBP (ENSVURG00010017481) #10 SEC23IP (ENSVURG00010017493) #11 PLPP4 (ENSVURG00010017515) #12 ENSVURG00010017529 WDR11 (ENSVURG00010017552) #13 FGFR2 (ENSVURG00010017618) #14 ATE1 (ENSVURG00010017712) #15 ENSVURG00010017748 #17 ENSVURG00010017780 #18 BTBD16 (ENSVURG00010018157) #19 ENSVURG00010018198 PLEKHA1 (ENSVURG00010018214) #20 HTRA1 (ENSVURG00010018270) #21 ENSVURG00010018555 #22 ENSVURG00010018628 #26 ENSVURG00010018656 ENSVURG00010018659 ##22 CUZD1 (ENSVURG00010018665) #29 C10orf88 (ENSVURG00010018674) #31 ENSVURG00010018686 #32 IKZF5 (ENSVURG00010018688) #33 ACADSB (ENSVURG00010018698) #34 ENSVURG00010018711 GPR26 (ENSVURG00010018721) CPXM2 (ENSVURG00010018730) CHST15 (ENSVURG00010018756) ENSVURG00010018775 ENSVURG00010018780 ENSVURG00010018781 Platypus DUPLICATION Platypus MODERN SPECIES 7 UCHL5 (ENSOANG00000002960) RO60 (ENSOANG00000002961) ENSOANG00000002962 CDC73 (ENSOANG00000002964) B3GALT2 (ENSOANG00000002965) ENSOANG00000011956 KCNT2 (ENSOANG00000049291) ENSOANG00000001407 ENSOANG00000007875 ENSOANG00000049896 ENSOANG00000044965 ENSOANG00000007864 ENSOANG00000031768 #19 PLEKHA1 (ENSOANG00000007865) #20 HTRA1 (ENSOANG00000045001) #21 ENSOANG00000002000 #22 ENSOANG00000049858 ##22 ENSOANG00000045064 #22 ENSOANG00000020984 ##22 ENSOANG00000047128 #26 CUZD1 (ENSOANG00000001997) #29 ENSOANG00000043341 #31 PSTK (ENSOANG00000001995) #32 IKZF5 (ENSOANG00000001994) #33 ACADSB (ENSOANG00000013324) #34 HMX3 (ENSOANG00000037629) #35 HMX2 (ENSOANG00000036447) #36 BUB3 (ENSOANG00000041516) #37 CPXM2 (ENSOANG00000038396) ENSOANG00000030444 #18 ENSOANG00000002087 #17 Platypus MODERN SPECIES 7 ENSOANG00000002962 CDC73 (ENSOANG00000002964) B3GALT2 (ENSOANG00000002965) ENSOANG00000011956 KCNT2 (ENSOANG00000049291) ENSOANG00000001407 ENSOANG00000007875 ENSOANG00000049896 ENSOANG00000044965 ENSOANG00000007864 ENSOANG00000031768 #19 PLEKHA1 (ENSOANG00000007865) #20 HTRA1 (ENSOANG00000045001) #21 ENSOANG00000002000 #22 ENSOANG00000049858 ##22 ENSOANG00000045064 #22 ENSOANG00000020984 ##22 ENSOANG00000047128 #26 CUZD1 (ENSOANG00000001997) #29 ENSOANG00000043341 #31 PSTK (ENSOANG00000001995) #32 IKZF5 (ENSOANG00000001994) #33 ACADSB (ENSOANG00000013324) #34 HMX3 (ENSOANG00000037629) #35 HMX2 (ENSOANG00000036447) #36 BUB3 (ENSOANG00000041516) #37 CPXM2 (ENSOANG00000038396) ENSOANG00000030444 #18 ENSOANG00000002087 #17 ATE1 (ENSOANG00000047065) #15 FGFR2 (ENSOANG00000029096) #14 Sauria ANCESTRAL SPECIES 8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT01030000235500 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Lepidosauria ANCESTRAL SPECIES 8 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 Episquamata ANCESTRAL SPECIES 2 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 Laterata ANCESTRAL SPECIES 213 ENSGT01030000235500 ENSGT00950000183145.E #22 Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 13 PLPP4 (ENSPMRG00000006469) #12 WDR11 (ENSPMRG00000006420) #13 FGFR2 (ENSPMRG00000006399) #14 ATE1 (ENSPMRG00000006382) #15 ENSPMRG00000006364 #17 TACC2 (ENSPMRG00000006314) #18 BTBD16 (ENSPMRG00000006301) #19 PLEKHA1 (ENSPMRG00000006289) #20 HTRA1 (ENSPMRG00000006287) #21 ENSPMRG00000006279 ENSPMRG00000006276 ENSPMRG00000006275 ENSPMRG00000006269 ENSPMRG00000006230 #22 ENSPMRG00000006207 #22 ENSPMRG00000006189 #22 ENSPMRG00000006176 ##22 CUZD1 (ENSPMRG00000006167) #29 C10orf88 (ENSPMRG00000006156) #31 ENSPMRG00000006144 PSTK (ENSPMRG00000006125) #32 IKZF5 (ENSPMRG00000006110) #33 ACADSB (ENSPMRG00000006103) #34 ENSPMRG00000006097 HMX3 (ENSPMRG00000006089) #35 HMX2 (ENSPMRG00000006086) #36 BUB3 (ENSPMRG00000006076) #37 GPR26 (ENSPMRG00000006065) CPXM2 (ENSPMRG00000006029) CHST15 (ENSPMRG00000006004) OAT (ENSPMRG00000005967) Common wall lizard MODERN SPECIES 13 SEC23IP (ENSPMRG00000006499) #11 ENSPMRG00000006493 PLPP4 (ENSPMRG00000006469) #12 WDR11 (ENSPMRG00000006420) #13 FGFR2 (ENSPMRG00000006399) #14 ATE1 (ENSPMRG00000006382) #15 ENSPMRG00000006364 #17 TACC2 (ENSPMRG00000006314) #18 BTBD16 (ENSPMRG00000006301) #19 PLEKHA1 (ENSPMRG00000006289) #20 HTRA1 (ENSPMRG00000006287) #21 ENSPMRG00000006279 ENSPMRG00000006276 ENSPMRG00000006275 ENSPMRG00000006269 ENSPMRG00000006230 #22 ENSPMRG00000006207 #22 ENSPMRG00000006189 #22 ENSPMRG00000006176 ##22 CUZD1 (ENSPMRG00000006167) #29 C10orf88 (ENSPMRG00000006156) #31 ENSPMRG00000006144 PSTK (ENSPMRG00000006125) #32 IKZF5 (ENSPMRG00000006110) #33 ACADSB (ENSPMRG00000006103) #34 ENSPMRG00000006097 HMX3 (ENSPMRG00000006089) #35 HMX2 (ENSPMRG00000006086) #36 BUB3 (ENSPMRG00000006076) #37 GPR26 (ENSPMRG00000006065) CPXM2 (ENSPMRG00000006029) Common wall lizard MODERN SPECIES 13 ENSPMRG00000006493 PLPP4 (ENSPMRG00000006469) #12 WDR11 (ENSPMRG00000006420) #13 FGFR2 (ENSPMRG00000006399) #14 ATE1 (ENSPMRG00000006382) #15 ENSPMRG00000006364 #17 TACC2 (ENSPMRG00000006314) #18 BTBD16 (ENSPMRG00000006301) #19 PLEKHA1 (ENSPMRG00000006289) #20 HTRA1 (ENSPMRG00000006287) #21 ENSPMRG00000006279 ENSPMRG00000006276 ENSPMRG00000006275 ENSPMRG00000006269 ENSPMRG00000006230 #22 ENSPMRG00000006207 #22 ENSPMRG00000006189 #22 ENSPMRG00000006176 ##22 CUZD1 (ENSPMRG00000006167) #29 C10orf88 (ENSPMRG00000006156) #31 ENSPMRG00000006144 PSTK (ENSPMRG00000006125) #32 IKZF5 (ENSPMRG00000006110) #33 ACADSB (ENSPMRG00000006103) #34 ENSPMRG00000006097 HMX3 (ENSPMRG00000006089) #35 HMX2 (ENSPMRG00000006086) #36 BUB3 (ENSPMRG00000006076) #37 GPR26 (ENSPMRG00000006065) CPXM2 (ENSPMRG00000006029) CHST15 (ENSPMRG00000006004) Toxicofera ANCESTRAL SPECIES 2 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 Lizard MODERN SPECIES 2 WDR11 (ENSACAG00000017159) #13 ENSACAG00000035820 ENSACAG00000037188 FGFR2 (ENSACAG00000017206) #14 ENSACAG00000039358 ATE1 (ENSACAG00000017242) #15 NSMCE4A (ENSACAG00000017278) #17 ENSACAG00000017293 #18 ENSACAG00000018553 BTBD16 (ENSACAG00000029070) #19 PLEKHA1 (ENSACAG00000043979) #20 ENSACAG00000034636 HTRA1 (ENSACAG00000041971) #21 ENSACAG00000037899 ENSACAG00000045427 ENSACAG00000017425 #22 ENSACAG00000038201 ADAM12 (ENSACAG00000000456) FANK1 (ENSACAG00000000847) BCCIP (ENSACAG00000000886) UROS (ENSACAG00000000920) EDRF1 (ENSACAG00000000994) TEX36 (ENSACAG00000001232) CTBP2 (ENSACAG00000014547) ZRANB1 (ENSACAG00000014485) ABRAXAS2 (ENSACAG00000014423) eef1akmt2 (ENSACAG00000038120) FAM53B (ENSACAG00000014398) ENSACAG00000044309 ENSACAG00000043228 LHPP (ENSACAG00000017564) Elapidae ANCESTRAL SPECIES 4 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a.b ENSGT00950000183001.a.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Indian cobra MODERN SPECIES 3 INPP5F (ENSNNAG00000005737) #9 MCMBP (ENSNNAG00000005668) #10 SEC23IP (ENSNNAG00000005588) #11 PLPP4 (ENSNNAG00000005540) #12 WDR11 (ENSNNAG00000005498) #13 FGFR2 (ENSNNAG00000005354) #14 ATE1 (ENSNNAG00000005291) #15 ENSNNAG00000005253 TACC2 (ENSNNAG00000004956) #18 BTBD16 (ENSNNAG00000004840) #19 PLEKHA1 (ENSNNAG00000004758) #20 HTRA1 (ENSNNAG00000004719) #21 ENSNNAG00000004693 ##22 ENSNNAG00000004671 ##22 ENSNNAG00000004649 ENSNNAG00000004527 #22 ENSNNAG00000004497 ##22 ENSNNAG00000003976 ##22 ENSNNAG00000003929 C10orf88 (ENSNNAG00000003898) #31 ENSNNAG00000003842 PSTK (ENSNNAG00000003820) #32 IKZF5 (ENSNNAG00000003799) #33 ACADSB (ENSNNAG00000003781) #34 HMX3 (ENSNNAG00000003758) #35 HMX2 (ENSNNAG00000003744) #36 BUB3 (ENSNNAG00000003731) #37 ENSNNAG00000003714 ENSNNAG00000003699 ENSNNAG00000003675 CPXM2 (ENSNNAG00000003642) Elapidae_a ANCESTRAL SPECIES ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00940000154525.b.a #29 ENSGT01030000236508 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 ENSGT00530000063371.B Blue-lipped sea krait MODERN SPECIES 5981 HTRA1 (ENSLLTG00000005375) #21 ENSLLTG00000005393 ##22 ENSLLTG00000005419 ##22 ENSLLTG00000005541 #22 Acanthophiinae ANCESTRAL SPECIES 1 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00940000154525.b.a #29 ENSGT01030000236508 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 ENSGT00530000063371.B Mainland tiger snake MODERN SPECIES ENSNSUG00000001093 PLPP4 (ENSNSUG00000001090) #12 ENSNSUG00000001085 WDR11 (ENSNSUG00000001076) #13 FGFR2 (ENSNSUG00000001069) #14 ATE1 (ENSNSUG00000001059) #15 NSMCE4A (ENSNSUG00000001055) #17 ENSNSUG00000001053 ENSNSUG00000001027 #18 BTBD16 (ENSNSUG00000000997) #19 PLEKHA1 (ENSNSUG00000000993) #20 HTRA1 (ENSNSUG00000000969) #21 ENSNSUG00000000967 ##22 ENSNSUG00000000962 #29 ENSNSUG00000000957 ENSNSUG00000000956 #22 ENSNSUG00000000933 C10orf88 (ENSNSUG00000000899) #31 PSTK (ENSNSUG00000000895) #32 IKZF5 (ENSNSUG00000000891) #33 ACADSB (ENSNSUG00000000887) #34 HMX3 (ENSNSUG00000000884) #35 HMX2 (ENSNSUG00000000883) #36 BUB3 (ENSNSUG00000000878) #37 GPR26 (ENSNSUG00000000874) CPXM2 (ENSNSUG00000000866) CHST15 (ENSNSUG00000000864) OAT (ENSNSUG00000000859) LHPP (ENSNSUG00000000857) FAM53B (ENSNSUG00000000856) EEF1AKMT2 (ENSNSUG00000000854) Archelosauria ANCESTRAL SPECIES 10 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT01030000235500 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Cryptodira ANCESTRAL SPECIES 6 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 154 ENSPSIG00000013652 ENSPSIG00000013690 BAG3 (ENSPSIG00000015275) #8 SEC23IP (ENSPSIG00000016139) #11 INPP5F (ENSPSIG00000016807) #9 MCMBP (ENSPSIG00000006179) #10 ENSPSIG00000000417 PLPP4 (ENSPSIG00000007283) #12 WDR11 (ENSPSIG00000007623) #13 FGFR2 (ENSPSIG00000007758) #14 ATE1 (ENSPSIG00000009429) #15 NSMCE4A (ENSPSIG00000010064) #17 TACC2 (ENSPSIG00000010319) #18 PLEKHA1 (ENSPSIG00000010906) #20 HTRA1 (ENSPSIG00000010931) #21 ENSPSIG00000011540 #22 ENSPSIG00000012134 Chinese turtle MODERN SPECIES 153 ENSPSIG00000004485 #22 GSTK1 (ENSPSIG00000005021) RAP1GAP (ENSPSIG00000005295) ENSPSIG00000005455 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT01030000235500.a ENSGT00940000163882.d ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Testudinidae ANCESTRAL SPECIES 9 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT01030000235500.a ENSGT00940000163882.d ENSGT00950000183145.A.a.c ##22 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 2172 ENSCABG00000002257 #22 ENSCABG00000002272 ENSCABG00000002275 ENSCABG00000002280 ENSCABG00000002281 GABARAPL1 (ENSCABG00000002282) ENSCABG00000002283 ENSCABG00000002284 ENSCABG00000002285 ENSCABG00000002287 ENSCABG00000002288 ENSCABG00000002289 ENSCABG00000002290 ENSCABG00000002292 Abingdon island giant tortoise MODERN SPECIES 772 ENSCABG00000012109 ENSCABG00000012112 #22 ENSCABG00000012117 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 21 BAG3 (ENSGEVG00005019883) #8 INPP5F (ENSGEVG00005019898) #9 MCMBP (ENSGEVG00005019925) #10 SEC23IP (ENSGEVG00005019936) #11 PLPP4 (ENSGEVG00005019965) #12 WDR11 (ENSGEVG00005019974) #13 ENSGEVG00005019994 ENSGEVG00005020010 #14 ENSGEVG00005020017 #14 ATE1 (ENSGEVG00005020042) #15 NSMCE4A (ENSGEVG00005020083) #17 ENSGEVG00005020092 #18 BTBD16 (ENSGEVG00005020101) #19 PLEKHA1 (ENSGEVG00005009217) #20 HTRA1 (ENSGEVG00005009396) #21 ENSGEVG00005009567 #22 ENSGEVG00005009616 #22 ENSGEVG00005009786 ENSGEVG00005009832 ENSGEVG00005009897 ##22 C10orf88 (ENSGEVG00005009973) #31 ENSGEVG00005009999 PSTK (ENSGEVG00005010124) #32 IKZF5 (ENSGEVG00005010148) #33 ACADSB (ENSGEVG00005010261) #34 HMX3 (ENSGEVG00005011045) #35 HMX2 (ENSGEVG00005011080) #36 BUB3 (ENSGEVG00005011128) #37 GPR26 (ENSGEVG00005011147) CPXM2 (ENSGEVG00005011196) CHST15 (ENSGEVG00005011451) Goode s thornscrub tortoise MODERN SPECIES 21 INPP5F (ENSGEVG00005019898) #9 MCMBP (ENSGEVG00005019925) #10 SEC23IP (ENSGEVG00005019936) #11 PLPP4 (ENSGEVG00005019965) #12 WDR11 (ENSGEVG00005019974) #13 ENSGEVG00005019994 ENSGEVG00005020010 #14 ENSGEVG00005020017 #14 ATE1 (ENSGEVG00005020042) #15 NSMCE4A (ENSGEVG00005020083) #17 ENSGEVG00005020092 #18 BTBD16 (ENSGEVG00005020101) #19 PLEKHA1 (ENSGEVG00005009217) #20 HTRA1 (ENSGEVG00005009396) #21 ENSGEVG00005009567 #22 ENSGEVG00005009616 #22 ENSGEVG00005009786 ENSGEVG00005009832 ENSGEVG00005009897 ##22 C10orf88 (ENSGEVG00005009973) #31 ENSGEVG00005009999 PSTK (ENSGEVG00005010124) #32 IKZF5 (ENSGEVG00005010148) #33 ACADSB (ENSGEVG00005010261) #34 HMX3 (ENSGEVG00005011045) #35 HMX2 (ENSGEVG00005011080) #36 BUB3 (ENSGEVG00005011128) #37 GPR26 (ENSGEVG00005011147) CPXM2 (ENSGEVG00005011196) CHST15 (ENSGEVG00005011451) OAT (ENSGEVG00005011512) Goode s thornscrub tortoise MODERN SPECIES 19 ENSGEVG00005019583 ENSGEVG00005019578 ENSGEVG00005019433 #22 ENSGEVG00005019310 ENSGEVG00005019141 ENSGEVG00005019067 ENSGEVG00005019057 ENSGEVG00005019044 DUSP4 (ENSGEVG00005019023) TNKS (ENSGEVG00005017485) PPP1R3B (ENSGEVG00005017094) ERI1 (ENSGEVG00005017077) MFHAS1 (ENSGEVG00005017057) ENSGEVG00005017033 ENSGEVG00005016993 HOPX (ENSGEVG00005016964) ENSGEVG00005016930 ENSGEVG00005016891 Emydidae ANCESTRAL SPECIES 6 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT01030000235500.a ENSGT00940000163882.d ENSGT00950000183145.A.a ##22 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 painted turtle MODERN SPECIES 15 ENSCPBG00000002230 ENSCPBG00000002224 PRLHR (ENSCPBG00000002209) CACUL1 (ENSCPBG00000002191) NANOS1 (ENSCPBG00000002172) EIF3A (ENSCPBG00000001266) ENSCPBG00000001216 SFXN4 (ENSCPBG00000001202) PRDX3 (ENSCPBG00000001195) GRK5 (ENSCPBG00000001153) RGS10 (ENSCPBG00000001134) TIAL1 (ENSCPBG00000001103) #7 BAG3 (ENSCPBG00000001092) #8 PLEKHA1 (ENSCPBG00000001016) #20 HTRA1 (ENSCPBG00000000966) #21 ENSCPBG00000000282 #22 ENSCPBG00000000175 ENSCPBG00000000160 ENSCPBG00000000152 ##22 C10orf88 (ENSCPBG00000000128) #31 ENSCPBG00000000116 IKZF5 (ENSCPBG00000028099) #33 ACADSB (ENSCPBG00000028097) #34 HMX3 (ENSCPBG00000028093) #35 HMX2 (ENSCPBG00000028090) #36 BUB3 (ENSCPBG00000028089) #37 GPR26 (ENSCPBG00000028085) CPXM2 (ENSCPBG00000028082) CHST15 (ENSCPBG00000028078) OAT (ENSCPBG00000028074) NKX1-2 (ENSCPBG00000028073) Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 1865 ENSTMTG00000019276 #22 Three-toed box turtle MODERN SPECIES 38 ENSTMTG00000006758 ENSTMTG00000006639 #26 ENSTMTG00000006539 #22 ENSTMTG00000006521 TDRD7 (ENSTMTG00000006491) TSTD2 (ENSTMTG00000006470) NCBP1 (ENSTMTG00000006425) XPA (ENSTMTG00000006408) FOXE1 (ENSTMTG00000006395) ENSTMTG00000006376 B4GALT1 (ENSTMTG00000006358) SMU1 (ENSTMTG00000006333) DNAJA1 (ENSTMTG00000006313) APTX (ENSTMTG00000006285) ACTL7A (ENSTMTG00000006275) ELP1 (ENSTMTG00000003442) TBC1D2 (ENSTMTG00000003167) CORO2A (ENSTMTG00000003152) Archosauria ANCESTRAL SPECIES 7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Aves ANCESTRAL SPECIES 6 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b.a ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Neognathae ANCESTRAL SPECIES 7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Neognathae_b ANCESTRAL SPECIES 8 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Neognathae_c ANCESTRAL SPECIES 8 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT01030000235500 ENSGT00950000183145.E #22 ENSGT00940000163882.e.a ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Kakapo DUPLICATION Kakapo DUPLICATION Kakapo DUPLICATION Kakapo MODERN SPECIES 21 RAB15 (ENSSHBG00005018227) GPX2 (ENSSHBG00005018223) CHURC1 (ENSSHBG00005018217) SPTB (ENSSHBG00005008745) ENSSHBG00005008435 NUP160 (ENSSHBG00005008355) FNBP4 (ENSSHBG00005008293) AGBL2 (ENSSHBG00005008277) MTCH2 (ENSSHBG00005008267) NUDT8 (ENSSHBG00005008258) NDUFV1 (ENSSHBG00005008244) ENSSHBG00005008227 CDK2AP2 (ENSSHBG00005008218) PITPNM1 (ENSSHBG00005008196) AIP (ENSSHBG00005000129) ENSSHBG00005004143 #22 ENSSHBG00005004121 #22 ENSSHBG00005004112 #22 ENSSHBG00005004098 ENSSHBG00005004084 ENSSHBG00005004065 TALDO1 (ENSSHBG00005004056) EPS8L2 (ENSSHBG00005003789) TMEM80 (ENSSHBG00005003689) DEAF1 (ENSSHBG00005003577) DRD4 (ENSSHBG00005003546) ENSSHBG00005003536 BUB1B (ENSSHBG00005003488) PAK6 (ENSSHBG00005003451) PLCB2 (ENSSHBG00005003115) DISP2 (ENSSHBG00005002967) Kakapo MODERN SPECIES 21 GPX2 (ENSSHBG00005018223) CHURC1 (ENSSHBG00005018217) SPTB (ENSSHBG00005008745) ENSSHBG00005008435 NUP160 (ENSSHBG00005008355) FNBP4 (ENSSHBG00005008293) AGBL2 (ENSSHBG00005008277) MTCH2 (ENSSHBG00005008267) NUDT8 (ENSSHBG00005008258) NDUFV1 (ENSSHBG00005008244) ENSSHBG00005008227 CDK2AP2 (ENSSHBG00005008218) PITPNM1 (ENSSHBG00005008196) AIP (ENSSHBG00005000129) ENSSHBG00005004143 #22 ENSSHBG00005004121 #22 ENSSHBG00005004112 #22 ENSSHBG00005004098 ENSSHBG00005004084 ENSSHBG00005004065 TALDO1 (ENSSHBG00005004056) EPS8L2 (ENSSHBG00005003789) TMEM80 (ENSSHBG00005003689) DEAF1 (ENSSHBG00005003577) DRD4 (ENSSHBG00005003546) ENSSHBG00005003536 BUB1B (ENSSHBG00005003488) PAK6 (ENSSHBG00005003451) PLCB2 (ENSSHBG00005003115) DISP2 (ENSSHBG00005002967) ENSSHBG00005002949 Kakapo MODERN SPECIES 21 CHURC1 (ENSSHBG00005018217) SPTB (ENSSHBG00005008745) ENSSHBG00005008435 NUP160 (ENSSHBG00005008355) FNBP4 (ENSSHBG00005008293) AGBL2 (ENSSHBG00005008277) MTCH2 (ENSSHBG00005008267) NUDT8 (ENSSHBG00005008258) NDUFV1 (ENSSHBG00005008244) ENSSHBG00005008227 CDK2AP2 (ENSSHBG00005008218) PITPNM1 (ENSSHBG00005008196) AIP (ENSSHBG00005000129) ENSSHBG00005004143 #22 ENSSHBG00005004121 #22 ENSSHBG00005004112 #22 ENSSHBG00005004098 ENSSHBG00005004084 ENSSHBG00005004065 TALDO1 (ENSSHBG00005004056) EPS8L2 (ENSSHBG00005003789) TMEM80 (ENSSHBG00005003689) DEAF1 (ENSSHBG00005003577) DRD4 (ENSSHBG00005003546) ENSSHBG00005003536 BUB1B (ENSSHBG00005003488) PAK6 (ENSSHBG00005003451) PLCB2 (ENSSHBG00005003115) DISP2 (ENSSHBG00005002967) ENSSHBG00005002949 IVD (ENSSHBG00005002925) Kakapo MODERN SPECIES 22 ENSSHBG00005003012 ENSSHBG00005003028 BAG3 (ENSSHBG00005003039) #8 INPP5F (ENSSHBG00005003229) #9 MCMBP (ENSSHBG00005003485) #10 SEC23IP (ENSSHBG00005003520) #11 PLPP4 (ENSSHBG00005003537) #12 WDR11 (ENSSHBG00005003553) #13 FGFR2 (ENSSHBG00005003568) #14 ATE1 (ENSSHBG00005003603) #15 NSMCE4A (ENSSHBG00005003627) #17 TACC2 (ENSSHBG00005003706) #18 PLEKHA1 (ENSSHBG00005004075) #20 HTRA1 (ENSSHBG00005004092) #21 ENSSHBG00005004131 ENSSHBG00005004148 #22 ENSSHBG00005004175 C10orf88 (ENSSHBG00005004187) #31 ENSSHBG00005004196 PSTK (ENSSHBG00005004212) #32 IKZF5 (ENSSHBG00005004221) #33 ACADSB (ENSSHBG00005004229) #34 HMX3 (ENSSHBG00005004243) #35 HMX2 (ENSSHBG00005004253) #36 BUB3 (ENSSHBG00005004261) #37 GPR26 (ENSSHBG00005004264) CPXM2 (ENSSHBG00005004275) CHST15 (ENSSHBG00005004287) OAT (ENSSHBG00005004295) NKX1-2 (ENSSHBG00005004300) LHPP (ENSSHBG00005004303) Golden eagle DUPLICATION Golden eagle MODERN SPECIES 7 ENSACCG00020015124 CABP4 (ENSACCG00020015141) OSBP (ENSACCG00020015162) PATL1 (ENSACCG00020015185) STX3 (ENSACCG00020011485) MRPL16 (ENSACCG00020011506) CBLIF (ENSACCG00020011523) ENSACCG00020011543 MS4A12 (ENSACCG00020011563) ENSACCG00020011582 BAAT (ENSACCG00020011602) ZP1 (ENSACCG00020011636) PRPF19 (ENSACCG00020011674) TMEM132A (ENSACCG00020011751) SLC15A3 (ENSACCG00020011816) ENSACCG00020011851 #22 ENSACCG00020011928 VPS37C (ENSACCG00020011971) ENSACCG00020012108 ENSACCG00020012172 DDB1 (ENSACCG00020012215) TKFC (ENSACCG00020012290) CYB561A3 (ENSACCG00020012432) TMEM138 (ENSACCG00020012452) TMEM216 (ENSACCG00020012474) ENSACCG00020012497 SDHAF2 (ENSACCG00020012511) LRRC10B (ENSACCG00020012541) SYT7 (ENSACCG00020012563) DAGLA (ENSACCG00020012603) MYRF (ENSACCG00020012724) Golden eagle MODERN SPECIES 2 BAG3 (ENSACCG00020007545) #8 INPP5F (ENSACCG00020007437) #9 MCMBP (ENSACCG00020007244) #10 SEC23IP (ENSACCG00020007215) #11 PLPP4 (ENSACCG00020007199) #12 WDR11 (ENSACCG00020007177) #13 FGFR2 (ENSACCG00020007148) #14 ATE1 (ENSACCG00020007114) #15 NSMCE4A (ENSACCG00020007065) #17 ENSACCG00020006968 PLEKHA1 (ENSACCG00020006872) #20 ENSACCG00020006849 HTRA1 (ENSACCG00020006834) #21 ENSACCG00020006816 ENSACCG00020006805 #29 ENSACCG00020006746 #22 ENSACCG00020006663 C10orf88 (ENSACCG00020006628) #31 ENSACCG00020006582 PSTK (ENSACCG00020006551) #32 IKZF5 (ENSACCG00020006532) #33 ACADSB (ENSACCG00020006524) #34 HMX3 (ENSACCG00020006513) #35 HMX2 (ENSACCG00020006506) #36 BUB3 (ENSACCG00020006497) #37 GPR26 (ENSACCG00020006486) CPXM2 (ENSACCG00020006462) CHST15 (ENSACCG00020006444) OAT (ENSACCG00020006431) NKX1-2 (ENSACCG00020006421) LHPP (ENSACCG00020006411) Passeriformes ANCESTRAL SPECIES 10 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Passeriformes_d ANCESTRAL SPECIES 7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00940000163882.e.a ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Passeriformes_g ANCESTRAL SPECIES 194 ENSGT00950000183145.E #22 ENSGT01030000235500 Passeroidea ANCESTRAL SPECIES 201 ENSGT00950000183145.E #22 ENSGT01030000235500 Common canary MODERN SPECIES 7 BAG3 (ENSSCAG00000014200) #8 INPP5F (ENSSCAG00000014059) #9 MCMBP (ENSSCAG00000014009) #10 SEC23IP (ENSSCAG00000013890) #11 PLPP4 (ENSSCAG00000013843) #12 WDR11 (ENSSCAG00000013823) #13 ENSSCAG00000013814 FGFR2 (ENSSCAG00000013802) #14 ATE1 (ENSSCAG00000013795) #15 NSMCE4A (ENSSCAG00000013790) #17 TACC2 (ENSSCAG00000013757) #18 PLEKHA1 (ENSSCAG00000013721) #20 HTRA1 (ENSSCAG00000013709) #21 ENSSCAG00000013688 ENSSCAG00000013676 ENSSCAG00000013649 #22 ENSSCAG00000013633 #29 ENSSCAG00000013608 ENSSCAG00000013599 #31 ENSSCAG00000013593 PSTK (ENSSCAG00000013588) #32 IKZF5 (ENSSCAG00000013584) #33 ACADSB (ENSSCAG00000013578) #34 BUB3 (ENSSCAG00000013570) #37 GPR26 (ENSSCAG00000013565) CPXM2 (ENSSCAG00000013552) CHST15 (ENSSCAG00000013544) ENSSCAG00000013531 OAT (ENSSCAG00000013523) LHPP (ENSSCAG00000013513) EEF1AKMT2 (ENSSCAG00000013502) Flycatcher DUPLICATION Flycatcher MODERN SPECIES 304 ENSFALG00000009021 ENSFALG00000022979 ENSFALG00000014367 ENSFALG00000028677 ENSFALG00000027062 ENSFALG00000009035 #22 ENSFALG00000024248 Flycatcher MODERN SPECIES 9 COL26A1 (ENSFALG00000009371) ENSFALG00000009375 ENSFALG00000009380 CUX1 (ENSFALG00000009409) SH2B2 (ENSFALG00000009471) PRKRIP1 (ENSFALG00000026614) ORAI2 (ENSFALG00000025629) ALKBH4 (ENSFALG00000028280) LRWD1 (ENSFALG00000009512) ENSFALG00000009523 ENSFALG00000009533 ENSFALG00000009540 ENSFALG00000027894 DTX2 (ENSFALG00000009561) ENSFALG00000009575 ##22 ENSFALG00000028705 #22 YWHAG (ENSFALG00000026928) HSPB1 (ENSFALG00000009587) ENSFALG00000026877 SRRM3 (ENSFALG00000009603) MDH2 (ENSFALG00000009620) TMEM120A (ENSFALG00000009669) POR (ENSFALG00000009688) ENSFALG00000009693 ENSFALG00000009696 MMP28 (ENSFALG00000009701) ENSFALG00000027238 RASL10B (ENSFALG00000027159) AP2B1 (ENSFALG00000009715) PEX12 (ENSFALG00000009719) UNC45B (ENSFALG00000009721) Flycatcher MODERN SPECIES 25 ENSFALG00000002173 BAG3 (ENSFALG00000002165) #8 ENSFALG00000024667 INPP5F (ENSFALG00000002164) #9 MCMBP (ENSFALG00000002162) #10 SEC23IP (ENSFALG00000002159) #11 PLPP4 (ENSFALG00000026547) #12 ENSFALG00000024601 WDR11 (ENSFALG00000002154) #13 FGFR2 (ENSFALG00000002152) #14 ATE1 (ENSFALG00000002151) #15 NSMCE4A (ENSFALG00000002150) #17 TACC2 (ENSFALG00000002148) #18 PLEKHA1 (ENSFALG00000002147) #20 HTRA1 (ENSFALG00000028171) #21 ENSFALG00000002135 #22 ENSFALG00000025833 ENSFALG00000004924 ##22 ENSFALG00000023413 ENSFALG00000004913 #29 C10orf88 (ENSFALG00000028462) #31 ENSFALG00000004871 IKZF5 (ENSFALG00000004728) #33 ACADSB (ENSFALG00000024790) #34 HMX3 (ENSFALG00000026829) #35 BUB3 (ENSFALG00000004735) #37 ENSFALG00000028168 GPR26 (ENSFALG00000004740) CPXM2 (ENSFALG00000004744) CHST15 (ENSFALG00000004749) ENSFALG00000004758 Galloanserae ANCESTRAL SPECIES 6 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882.e.a ENSGT00950000183145.C.b ##22 ENSGT00940000154525.b.a.c.b #29 ENSGT00940000163882.f ENSGT00940000154525.b.a.d #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Anatidae ANCESTRAL SPECIES ENSGT00950000183145.E #22 Duck MODERN SPECIES 2809 ENSAPLG00000025404 #22 Phasianidae ANCESTRAL SPECIES 6 ENSGT00940000160702.b ENSGT00940000161426 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882.e.a ENSGT00950000183145.C.b ##22 ENSGT00940000163882.f ENSGT00950000183145.A.b.a ##22 ENSGT00940000154525.b.a.d #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Phasianidae_b ANCESTRAL SPECIES 6 ENSGT00940000160702.b ENSGT00940000161426 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##22 ENSGT00940000154525.b.a.d #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Chicken DUPLICATION Chicken MODERN SPECIES 35 GRK5 (ENSGALG00010002251) RGS10 (ENSGALG00010002277) TIAL1 (ENSGALG00010002361) BAG3 (ENSGALG00010002371) #8 INPP5F (ENSGALG00010002383) #9 MCMBP (ENSGALG00010002387) #10 SEC23IP (ENSGALG00010002396) #11 PLPP4 (ENSGALG00010001287) #12 WDR11 (ENSGALG00010001398) #13 FGFR2 (ENSGALG00010001411) #14 ATE1 (ENSGALG00010001426) #15 NSMCE4A (ENSGALG00010001432) #17 TACC2 (ENSGALG00010001465) #18 PLEKHA1 (ENSGALG00010001702) #20 HTRA1 (ENSGALG00010001705) #21 ENSGALG00010001707 #22 ENSGALG00010001726 ENSGALG00010003199 #22 ENSGALG00010001743 ##22 CUZD1 (ENSGALG00010001755) #29 C10orf88 (ENSGALG00010001759) #31 ENSGALG00010001764 IKZF5 (ENSGALG00010001793) #33 PSTK (ENSGALG00010001798) #32 ACADSB (ENSGALG00010001811) #34 HMX3 (ENSGALG00010001815) #35 HMX2 (ENSGALG00010001821) #36 BUB3 (ENSGALG00010001832) #37 GPR26 (ENSGALG00010001842) CPXM2 (ENSGALG00010001852) CHST15 (ENSGALG00010001856) Chicken MODERN SPECIES 35 TIAL1 (ENSGALG00010002361) BAG3 (ENSGALG00010002371) #8 INPP5F (ENSGALG00010002383) #9 MCMBP (ENSGALG00010002387) #10 SEC23IP (ENSGALG00010002396) #11 PLPP4 (ENSGALG00010001287) #12 WDR11 (ENSGALG00010001398) #13 FGFR2 (ENSGALG00010001411) #14 ATE1 (ENSGALG00010001426) #15 NSMCE4A (ENSGALG00010001432) #17 TACC2 (ENSGALG00010001465) #18 PLEKHA1 (ENSGALG00010001702) #20 HTRA1 (ENSGALG00010001705) #21 ENSGALG00010001707 #22 ENSGALG00010001726 ENSGALG00010003199 #22 ENSGALG00010001743 ##22 CUZD1 (ENSGALG00010001755) #29 C10orf88 (ENSGALG00010001759) #31 ENSGALG00010001764 IKZF5 (ENSGALG00010001793) #33 PSTK (ENSGALG00010001798) #32 ACADSB (ENSGALG00010001811) #34 HMX3 (ENSGALG00010001815) #35 HMX2 (ENSGALG00010001821) #36 BUB3 (ENSGALG00010001832) #37 GPR26 (ENSGALG00010001842) CPXM2 (ENSGALG00010001852) CHST15 (ENSGALG00010001856) OAT (ENSGALG00010001877) ENSGALG00010001884 Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth MODERN SPECIES 2516 ENSLACG00000006324 #22 ENSLACG00000004064 ENSLACG00000003601 PSME1 (ENSLACG00000002842) EMC9 (ENSLACG00000002142) PSME2 (ENSLACG00000000939) Coelacanth MODERN SPECIES 1347 ANGPTL1 (ENSLACG00000010805) RALGPS2 (ENSLACG00000009984) FAM20B (ENSLACG00000008119) TOR3A (ENSLACG00000007557) ABL2 (ENSLACG00000005659) ENSLACG00000001840 #22 Coelacanth MODERN SPECIES 946 nsmce4a (ENSLACG00000022174) ENSLACG00000012943 #18 ENSLACG00000012172 PLEKHA1 (ENSLACG00000010973) #20 HTRA1 (ENSLACG00000010012) #21 ENSLACG00000008770 #22 C10orf88 (ENSLACG00000008626) #31 PSTK (ENSLACG00000022256) #32 IKZF5 (ENSLACG00000006175) #33 ACADSB (ENSLACG00000005231) #34 HMX3 (ENSLACG00000001487) #35 HMX2 (ENSLACG00000000874) #36 Actinopterygii ANCESTRAL SPECIES 528 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b ##22 ENSGT00940000162108 #26 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475 ENSGT00950000183145.B.a.a ##22 Reedfish MODERN SPECIES 2 ENSECRG00000009641 ZBTB45 (ENSECRG00000009676) ENSECRG00000009686 chmp2a (ENSECRG00000009694) UBE2M (ENSECRG00000009706) ENSECRG00000009722 ENSECRG00000009734 ENSECRG00000009741 tnnc1b (ENSECRG00000009751) si:dkey-6n6.1 (ENSECRG00000009758) bgna (ENSECRG00000009777) ENSECRG00000009799 ccnq (ENSECRG00000009809) DUSP9 (ENSECRG00000009818) ENSECRG00000009832 ENSECRG00000009844 #22 trpm4a (ENSECRG00000009857) ENSECRG00000009885 ENSECRG00000009906 wdr13 (ENSECRG00000009926) ENSECRG00000009953 pnkp (ENSECRG00000009996) ENSECRG00000010035 rras (ENSECRG00000010043) ENSECRG00000010057 ENSECRG00000010069 IRF3 (ENSECRG00000010094) ENSECRG00000010145 ENSECRG00000010245 ENSECRG00000010256 ENSECRG00000010268 Neopterygii ANCESTRAL SPECIES 432 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b ##22 ENSGT00940000162108 #26 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475 ENSGT00950000183145.B.a.a.b ##22 Spotted gar DUPLICATION Spotted gar DUPLICATION Spotted gar MODERN SPECIES 455 ENSLOCG00000000128 #22 Spotted gar MODERN SPECIES 72 ENSLOCG00000000100 #22 Spotted gar MODERN SPECIES 671 apol1 (ENSLOCG00000002528) ENSLOCG00000002510 ENSLOCG00000002497 ENSLOCG00000002482 ENSLOCG00000002467 ENSLOCG00000002445 ENSLOCG00000002430 ENSLOCG00000002418 ENSLOCG00000002407 ENSLOCG00000002378 btr12 (ENSLOCG00000002362) ENSLOCG00000002347 ENSLOCG00000002338 ENSLOCG00000002307 ENSLOCG00000002270 ENSLOCG00000002245 #22 ENSLOCG00000002234 ENSLOCG00000002218 ENSLOCG00000002211 ENSLOCG00000002194 ENSLOCG00000002167 ENSLOCG00000002147 ENSLOCG00000002131 PEA15 (ENSLOCG00000002124) ENSLOCG00000018222 casq1b (ENSLOCG00000002107) ENSLOCG00000002099 ENSLOCG00000002075 ENSLOCG00000002063 MYADM (ENSLOCG00000018221) ENSLOCG00000002044 ##22 Osteoglossocephalai ANCESTRAL SPECIES 716 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b ##22 ENSGT00940000162108 #26 Clupeocephala ANCESTRAL SPECIES 990 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d ##22 Euteleosteomorpha ANCESTRAL SPECIES 754 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d ##22 Protacanthopterygii ANCESTRAL SPECIES 624 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.a.a.b.b.a ##22 Salmoninae ANCESTRAL SPECIES 166 ENSGT00390000009300.a.g ENSGT00950000183179.b.a ENSGT00940000159001 ENSGT00950000183086.a.a.a.l ENSGT00940000161133 ENSGT00940000159079 ENSGT00940000164281 ENSGT00440000038972.f ENSGT00390000003022.c ENSGT00950000182945.b.a.a.a.b.b.d.a ENSGT00390000016016.B ENSGT00940000153541.B.k ENSGT00940000164248.b.a.c ENSGT00940000155311.C.d.c ENSGT00390000008714.a.y ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.a.a.b.b.a.b ##22 ENSGT00940000165254.c.b.c ENSGT00940000166498.a ENSGT00390000003344.f ENSGT00940000156361.B.f ENSGT00390000014494.xb ENSGT00950000182931.B.a.b.j ENSGT00950000183011.c.a.a.f ENSGT00390000016950.ob ENSGT00390000018003.a ENSGT00940000154484.A ENSGT00390000001400 ENSGT00940000160734.d.d ENSGT00390000016392.p ENSGT00400000023987.d.d Huchen MODERN SPECIES 37 ENSHHUG00000017026 nmnat1 (ENSHHUG00000017044) lzic (ENSHHUG00000017052) ENSHHUG00000017060 clstn1 (ENSHHUG00000017074) ENSHHUG00000017132 ctnnbip1 (ENSHHUG00000017147) pik3cd (ENSHHUG00000017171) tmem201 (ENSHHUG00000018823) ENSHHUG00000018840 ENSHHUG00000019020 tpk2 (ENSHHUG00000019213) ENSHHUG00000019250 bgna (ENSHHUG00000019257) dedd (ENSHHUG00000019264) ENSHHUG00000019271 #22 ENSHHUG00000019279 ##22 atp2b3a (ENSHHUG00000019305) nr1h5 (ENSHHUG00000019636) slc66a1 (ENSHHUG00000019646) trim33 (ENSHHUG00000019655) bcas2 (ENSHHUG00000019878) DENND2C (ENSHHUG00000019892) ampd1 (ENSHHUG00000019906) csde1 (ENSHHUG00000020222) SIKE1 (ENSHHUG00000021017) ENSHHUG00000021025 TMCO4 (ENSHHUG00000021040) vwa1 (ENSHHUG00000021071) otud3 (ENSHHUG00000021079) TMEM240 (ENSHHUG00000021088) Acanthomorphata ANCESTRAL SPECIES 719 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d ##22 Euacanthomorphacea ANCESTRAL SPECIES 455 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d ##22 Percomorphaceae ANCESTRAL SPECIES 7 ENSGT00940000160409 ENSGT00940000156846 ENSGT00390000012992 ENSGT00950000183133.d ENSGT01030000234629.B ENSGT00940000158954 ENSGT00940000164475 ENSGT00940000165576.a.b ENSGT00950000183145.A.b.a ##22 ENSGT01030000234785 ENSGT00950000183145.A.a ##22 ENSGT00950000183145.B.a.a.b ##22 ENSGT00940000156038.a.a.d.a ENSGT01100000263525.a.b.a.a ENSGT00390000007688.b ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d ##22 ENSGT00940000162108 #26 ENSGT00510000050141.a ENSGT00950000182846.a.a.a.a.b ENSGT00940000160260 ENSGT00390000001958 ENSGT00940000158169.b ENSGT00940000157663 ENSGT00940000154679 ENSGT00950000183011.d.c ENSGT00940000158399 ENSGT00940000153567.b.b ENSGT00950000182998.C.a.k ENSGT00950000183146.a.b.b ENSGT00940000159736.a Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000153615.a.a.a ENSGT00730000114829 ENSGT00950000182805.a.a.a.a.b ENSGT00940000160409 ENSGT00940000156846 ENSGT00390000012992 ENSGT00950000183133.d ENSGT01030000234629.B ENSGT00940000158954 ENSGT00940000164475 ENSGT00940000163299.B.b.b.g.b ENSGT00950000183145.A.b.a ##22 ENSGT00950000183145.A.a ##22 ENSGT00950000183145.B.a.a.b.f ##22 ENSGT00940000156038.a.a.d.a ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d ##22 ENSGT00940000162108 #26 ENSGT00510000050141.a ENSGT00950000182846.a.a.a.a.b ENSGT00940000160260 ENSGT00390000001958 ENSGT00940000158169.b ENSGT00940000157663 ENSGT00940000154679 ENSGT00950000183011.d.c ENSGT00940000158399 ENSGT00940000153567.b.b ENSGT00950000182998.C.a.k ENSGT00950000183146.a.b.b ENSGT00940000159736.a Ovalentaria ANCESTRAL SPECIES 216 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d.e.a ##22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183145.E #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000183145.E #22 Midas cichlid MODERN SPECIES 685 ENSACIG00000023821 ENSACIG00000023825 ENSACIG00000023828 ENSACIG00000023830 #22 vbp1 (ENSACIG00000023834) RAB39B (ENSACIG00000023837) zgc:162171 (ENSACIG00000023841) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183145.E #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183145.E #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183145.E #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183145.E #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183145.E #22 Zebra mbuna MODERN SPECIES 1107 ZNF653 (ENSMZEG00005001900) tspan35 (ENSMZEG00005001881) tspan4b (ENSMZEG00005001874) ENSMZEG00005001858 nosip (ENSMZEG00005001807) rcn3 (ENSMZEG00005001801) abat (ENSMZEG00005001747) pdxdc1 (ENSMZEG00005001733) slc25a23b (ENSMZEG00005001708) gps1 (ENSMZEG00005001674) ENSMZEG00005001658 ENSMZEG00005001552 ube2z (ENSMZEG00005001531) atp5mc1 (ENSMZEG00005001524) ENSMZEG00005001512 ENSMZEG00005001485 #22 ENSMZEG00005001479 ENSMZEG00005001318 mpp2a (ENSMZEG00005001260) ENSMZEG00005001111 ENSMZEG00005001089 smarce1 (ENSMZEG00005001067) ENSMZEG00005001061 rpl23 (ENSMZEG00005000906) ENSMZEG00005000874 ENSMZEG00005000861 CA10 (ENSMZEG00005000607) ENSMZEG00005000583 ENSMZEG00005000546 timm29 (ENSMZEG00005000529) yipf2 (ENSMZEG00005000520) Atherinomorphae ANCESTRAL SPECIES 237 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d.e.a ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183145.E #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000183145.E #22 NAME_4 ANCESTRAL SPECIES ENSGT00950000183145.E #22 Mummichog MODERN SPECIES 2218 klf6a (ENSFHEG00000018797) PFKP (ENSFHEG00000018751) ENSFHEG00000000478 ENSFHEG00000018564 wdr37 (ENSFHEG00000018542) idi1 (ENSFHEG00000018499) cpne3 (ENSFHEG00000018465) cpne3 (ENSFHEG00000018413) cpne3 (ENSFHEG00000018298) rmdn1 (ENSFHEG00000018279) WWP1 (ENSFHEG00000018259) ENSFHEG00000018207 snx16 (ENSFHEG00000018198) ENSFHEG00000018187 YWHAG (ENSFHEG00000018168) ENSFHEG00000018156 #22 ENSFHEG00000018144 hspb1 (ENSFHEG00000018134) hspb1 (ENSFHEG00000018125) ENSFHEG00000018122 ENSFHEG00000018112 ENSFHEG00000018096 Oryzias ANCESTRAL SPECIES 209 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d.e.a ##22 Oryzias_b ANCESTRAL SPECIES ENSGT00950000183145.E #22 Javanese ricefish MODERN SPECIES 21 adnpb (ENSOJAG00000023274) pard6b (ENSOJAG00000023269) ARFGEF2 (ENSOJAG00000023063) bcl2l1 (ENSOJAG00000023045) cox4i2 (ENSOJAG00000023040) taf13 (ENSOJAG00000023037) ENSOJAG00000023029 ENSOJAG00000023022 ENSOJAG00000023020 ENSOJAG00000022697 lamb2 (ENSOJAG00000021744) USP19 (ENSOJAG00000021704) ENSOJAG00000021697 ENSOJAG00000021682 ENSOJAG00000021664 ENSOJAG00000021642 #22 ENSOJAG00000021628 pim1 (ENSOJAG00000021597) gss (ENSOJAG00000021554) zgc:103759 (ENSOJAG00000021543) ARHGAP4 (ENSOJAG00000021471) cav4b (ENSOJAG00000021464) fam50a (ENSOJAG00000021434) ENSOJAG00000021424 ENSOJAG00000021417 sars1 (ENSOJAG00000021396) ENSOJAG00000021389 tmem106c (ENSOJAG00000021384) ENSOJAG00000021381 krt18a.2 (ENSOJAG00000021376) krt18a.1 (ENSOJAG00000021370) Oryzias_a ANCESTRAL SPECIES 261 ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.b.d.e.a.a ##22 Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR MODERN SPECIES 12 itgb1a (ENSORLG00000004663) nrp1a (ENSORLG00000004717) ENSORLG00000004738 CUL2 (ENSORLG00000004776) CCNY (ENSORLG00000004790) GJD4 (ENSORLG00000024722) fzd8a (ENSORLG00000004795) klf6a (ENSORLG00000026971) PFKP (ENSORLG00000004933) ENSORLG00000028284 ENSORLG00000027308 ENSORLG00000029428 ENSORLG00000026410 ENSORLG00000027470 ENSORLG00000004947 ##22 ENSORLG00000026129 #22 ENSORLG00000029348 ADARB2 (ENSORLG00000027340) wdr37 (ENSORLG00000004980) idi1 (ENSORLG00000004991) cpne3 (ENSORLG00000005092) CPNE3 (ENSORLG00000029296) rmdn1 (ENSORLG00000029876) WWP1 (ENSORLG00000005146) ENSORLG00000025307 snx16 (ENSORLG00000005193) ENSORLG00000005218 adh5 (ENSORLG00000005183) ENSORLG00000024843 ENSORLG00000019355 serpinb1l3 (ENSORLG00000005255) Japanese Medaka HdrR MODERN SPECIES 21 adnpb (ENSORLG00000001864) pard6b (ENSORLG00000001861) ARFGEF2 (ENSORLG00000001855) bcl2l1 (ENSORLG00000025151) cox4i2 (ENSORLG00000001813) taf13 (ENSORLG00000023250) tnnc2.2 (ENSORLG00000001797) ENSORLG00000001761 ENSORLG00000001750 ENSORLG00000001709 lamb2 (ENSORLG00000028202) USP19 (ENSORLG00000001685) ENSORLG00000026988 ENSORLG00000028314 ENSORLG00000027819 ENSORLG00000029735 #22 ENSORLG00000026909 ENSORLG00000001660 pim1 (ENSORLG00000001653) gss (ENSORLG00000001633) zgc:103759 (ENSORLG00000001613) ENSORLG00000001598 cav4b (ENSORLG00000024542) fam50a (ENSORLG00000001578) ENSORLG00000001557 sars1 (ENSORLG00000001547) ENSORLG00000001527 tmem106c (ENSORLG00000001519) ENSORLG00000001505 krt18a.2 (ENSORLG00000001491) krt18a.1 (ENSORLG00000001481) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000183145.E #22 Eupercaria ANCESTRAL SPECIES ENSGT00950000183145.E #22 Eupecaria_A ANCESTRAL SPECIES ENSGT00950000183145.E #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000183145.E #22 Eupecaria_C ANCESTRAL SPECIES ENSGT00950000183145.E #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00950000183145.E #22 European seabass MODERN SPECIES 21 ENSDLAG00005029231 ENSDLAG00005005891 ENSDLAG00005029541 ENSDLAG00005020571 ENSDLAG00005013141 ENSDLAG00005015840 ENSDLAG00005034745 ENSDLAG00005002283 ENSDLAG00005024524 ENSDLAG00005024452 ENSDLAG00005024441 ENSDLAG00005033915 ENSDLAG00005030229 ENSDLAG00005028641 ##22 ENSDLAG00005027964 #26 ENSDLAG00005002383 #22 ENSDLAG00005027805 ENSDLAG00005033377 ENSDLAG00005024075 ENSDLAG00005030043 ##22 ENSDLAG00005034086 ENSDLAG00005024432 ENSDLAG00005031603 ENSDLAG00005031706 ##22 ENSDLAG00005024053 ENSDLAG00005030191 ENSDLAG00005024037 ENSDLAG00005034459 ENSDLAG00005019193 ENSDLAG00005031707 ENSDLAG00005024032 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00950000183145.E #22 Anabantaria ANCESTRAL SPECIES 1 ENSGT01050000244894.a.a.a.b ENSGT01050000244894.b.b.d.a ENSGT00390000015892.a ENSGT00940000156853 ENSGT00950000182933.A.a.b ENSGT00950000183044.a.a.a.b ENSGT00940000160070.b.c.b ENSGT00390000004090 ENSGT00940000159703 ENSGT00550000075065.b ENSGT00940000164753.b ENSGT00940000158204.d ENSGT00390000013080 ENSGT01070000253775.b ENSGT00940000156038.a.a.d.a ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.a.b.f ##22 ENSGT01100000263525.a.b.a.a ENSGT00940000177102 ENSGT00950000183135.A.b ENSGT00390000009595.b ENSGT00390000013732 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000158786 ENSGT00940000156051.c.b ENSGT00390000011987 ENSGT01050000244879.a.b.f ENSGT00940000154396.b.a.a.b ENSGT00940000156708.a.a ENSGT00950000182849.B.c.a.a Anabantoidei ANCESTRAL SPECIES ENSGT00530000069282.A ENSGT01050000244894.a.a.a.b ENSGT01050000244894.b.b.d.a ENSGT00390000015892.a ENSGT00940000156853 ENSGT00950000182933.A.a.b ENSGT00950000183044.a.a.a.b ENSGT00940000160070.b.c.b ENSGT00390000004090 ENSGT00940000159703 ENSGT00550000075065.b ENSGT00940000164753.b ENSGT00940000158204.d ENSGT00390000013080 ENSGT01070000253775.b ENSGT00950000183145.E #22 ENSGT00950000183145.B.a.a.b.f ##22 ENSGT01100000263525.a.b.a.a ENSGT00940000177102 ENSGT00950000183135.A.b ENSGT00390000009595.b ENSGT00390000013732 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000158786 ENSGT00940000156051.c.b ENSGT00390000011987 ENSGT01050000244879.a.b.f ENSGT00940000154396.b.a.a.b ENSGT00940000156708.a.a ENSGT00950000182849.B.c.a.a Climbing perch MODERN SPECIES TMC8 (ENSATEG00000028212) TMC8 (ENSATEG00000020004) TMC6 (ENSATEG00000019964) ENSATEG00000019940 aspscr1 (ENSATEG00000019927) ENSATEG00000019897 ENSATEG00000019873 MAFG (ENSATEG00000019866) ENSATEG00000019852 SIRT7 (ENSATEG00000019785) pcyt2 (ENSATEG00000019734) gnav1 (ENSATEG00000019693) npb (ENSATEG00000019653) sgsh (ENSATEG00000019621) slc26a11 (ENSATEG00000019534) ENSATEG00000019521 #22 ENSATEG00000019502 ##22 ENSATEG00000026831 ENSATEG00000025501 nanos3 (ENSATEG00000027158) CC2D1A (ENSATEG00000019431) mri1 (ENSATEG00000019410) zgc:136864 (ENSATEG00000025205) ENSATEG00000019388 ENSATEG00000019353 khsrp (ENSATEG00000019332) DCAF15 (ENSATEG00000019319) ENSATEG00000019287 rln3b (ENSATEG00000019231) ENSATEG00000019171 ENSATEG00000019157 Carangaria ANCESTRAL SPECIES ENSGT00950000183145.E #22 Pleuronectoidei ANCESTRAL SPECIES ENSGT00950000183145.E #22 Tongue sole MODERN SPECIES 31 ENSCSEG00000013603 ap1b1 (ENSCSEG00000013466) rasl10a (ENSCSEG00000013444) ENSCSEG00000013436 osbp2b (ENSCSEG00000013407) tcn2 (ENSCSEG00000013399) ENSCSEG00000013382 #22 ENSCSEG00000013374 dguok (ENSCSEG00000013362) ENSCSEG00000013360 ENSCSEG00000013357 ANK1 (ENSCSEG00000013307) ebf2 (ENSCSEG00000013272) ENSCSEG00000012719 Elephant shark MODERN SPECIES 2192 ENSCMIG00000001433 #22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183145.E #22 Lamprey DUPLICATION Lamprey DUPLICATION Lamprey MODERN SPECIES 4286 ENSPMAG00000002092 #22 Lamprey MODERN SPECIES 1913 ENSPMAG00000002082 #22 Lamprey DUPLICATION Lamprey DUPLICATION Lamprey DUPLICATION Lamprey MODERN SPECIES 50 ENSPMAG00000006384 ENSPMAG00000006378 ENSPMAG00000006281 ENSPMAG00000006271 ENSPMAG00000006267 #22 ENSPMAG00000006255 ENSPMAG00000006243 #22 ENSPMAG00000006238 ENSPMAG00000006232 ENSPMAG00000006049 Lamprey MODERN SPECIES 5586 ENSPMAG00000000988 #22 Lamprey MODERN SPECIES 50 ENSPMAG00000006384 ENSPMAG00000006378 ENSPMAG00000006281 ENSPMAG00000006271 ENSPMAG00000006267 #22 ENSPMAG00000006255 ENSPMAG00000006243 #22 ENSPMAG00000006238 ENSPMAG00000006232 ENSPMAG00000006049 Lamprey MODERN SPECIES 5757 ENSPMAG00000005399 #22 Lamprey MODERN SPECIES 3391 ENSPMAG00000002042 #22 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Euteleostomi ANCESTRAL SPECIES 1428 ENSGT00950000183145.C ##22 ENSGT00950000183145.A.a ##22 Sarcopterygii ANCESTRAL SPECIES 252 ENSGT00390000017379 ENSGT00390000011596.a ENSGT00940000153653.a.b.a.b ENSGT00390000009864 ENSGT00390000004368 ENSGT00940000155286 ENSGT00390000013910 ENSGT00940000156623 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00940000158171 ENSGT00390000006617 ENSGT00950000183145.C ##22 ENSGT00950000183145.A.a ##22 ENSGT00940000161663 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Mammalia ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Theria ANCESTRAL SPECIES 26 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Eutheria ANCESTRAL SPECIES 13 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00940000164044 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Boreoeutheria ANCESTRAL SPECIES 16 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Glires ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Sciuridae ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Marmotini ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Alpin marmot MODERN SPECIES 53 MCMBP (ENSMMMG00000000744) #10 SEC23IP (ENSMMMG00000000778) #11 PLPP4 (ENSMMMG00000000832) #12 ENSMMMG00000000883 ENSMMMG00000000896 WDR11 (ENSMMMG00000000912) #13 FGFR2 (ENSMMMG00000000986) #14 ATE1 (ENSMMMG00000001092) #15 NSMCE4A (ENSMMMG00000001206) #17 ENSMMMG00000001271 #18 ENSMMMG00000001553 #18 BTBD16 (ENSMMMG00000001579) #19 ENSMMMG00000001679 #20 ENSMMMG00000001757 ENSMMMG00000001770 #21 ENSMMMG00000001790 ##22 C10orf120 (ENSMMMG00000001925) #24 ENSMMMG00000001938 #26 ENSMMMG00000001979 #26 CUZD1 (ENSMMMG00000001993) #29 PSTK (ENSMMMG00000002014) #32 IKZF5 (ENSMMMG00000002033) #33 ACADSB (ENSMMMG00000002052) #34 HMX2 (ENSMMMG00000002076) #36 ENSMMMG00000002090 #37 GPR26 (ENSMMMG00000002142) CPXM2 (ENSMMMG00000002158) CHST15 (ENSMMMG00000002233) OAT (ENSMMMG00000002258) LHPP (ENSMMMG00000002272) FAM53B (ENSMMMG00000002296) Sauria ANCESTRAL SPECIES 8 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT01030000235500 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Archelosauria ANCESTRAL SPECIES 10 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT01030000235500 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Archosauria ANCESTRAL SPECIES 7 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Aves ANCESTRAL SPECIES 6 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b.a ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 African ostrich MODERN SPECIES 463 ENSSCUG00000007854 ENSSCUG00000007853 ENSSCUG00000007847 ##22 CUZD1 (ENSSCUG00000007842) #29 ENSSCUG00000007840 #31 ENSSCUG00000007839 PSTK (ENSSCUG00000007836) #32 IKZF5 (ENSSCUG00000007835) #33 ACADSB (ENSSCUG00000007834) #34 BUB3 (ENSSCUG00000007830) #37 GPR26 (ENSSCUG00000007827) CPXM2 (ENSSCUG00000007823) CHST15 (ENSSCUG00000007819) OAT (ENSSCUG00000007810) LHPP (ENSSCUG00000007807) FAM53B (ENSSCUG00000007804) EEF1AKMT2 (ENSSCUG00000007801) ABRAXAS2 (ENSSCUG00000007799) Neognathae ANCESTRAL SPECIES 7 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 Neognathae_b ANCESTRAL SPECIES 8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Passeriformes ANCESTRAL SPECIES 10 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182865.b.b.b.c.b ENSGT00630000089895 Great tit MODERN SPECIES 26 ENSPMJG00000005634 BAG3 (ENSPMJG00000005635) #8 INPP5F (ENSPMJG00000005637) #9 MCMBP (ENSPMJG00000005642) #10 SEC23IP (ENSPMJG00000005643) #11 PLPP4 (ENSPMJG00000005646) #12 WDR11 (ENSPMJG00000005652) #13 FGFR2 (ENSPMJG00000005686) #14 ATE1 (ENSPMJG00000005695) #15 NSMCE4A (ENSPMJG00000005697) #17 TACC2 (ENSPMJG00000005700) #18 PLEKHA1 (ENSPMJG00000005718) #20 HTRA1 (ENSPMJG00000005725) #21 ENSPMJG00000005727 ENSPMJG00000005730 ENSPMJG00000005731 ##22 ENSPMJG00000005732 ENSPMJG00000005734 ##22 C10orf88 (ENSPMJG00000005738) #31 ENSPMJG00000005740 IKZF5 (ENSPMJG00000005744) #33 PSTK (ENSPMJG00000005749) #32 ACADSB (ENSPMJG00000005752) #34 HMX3 (ENSPMJG00000005758) #35 HMX2 (ENSPMJG00000005760) #36 BUB3 (ENSPMJG00000005761) #37 GPR26 (ENSPMJG00000005767) CPXM2 (ENSPMJG00000005769) CHST15 (ENSPMJG00000005775) ENSPMJG00000005788 OAT (ENSPMJG00000005814) Passeriformes_d ANCESTRAL SPECIES 7 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00940000163882.e.a ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182865.b.b.b.c.b Flycatcher MODERN SPECIES 25 ENSFALG00000024667 INPP5F (ENSFALG00000002164) #9 MCMBP (ENSFALG00000002162) #10 SEC23IP (ENSFALG00000002159) #11 PLPP4 (ENSFALG00000026547) #12 ENSFALG00000024601 WDR11 (ENSFALG00000002154) #13 FGFR2 (ENSFALG00000002152) #14 ATE1 (ENSFALG00000002151) #15 NSMCE4A (ENSFALG00000002150) #17 TACC2 (ENSFALG00000002148) #18 PLEKHA1 (ENSFALG00000002147) #20 HTRA1 (ENSFALG00000028171) #21 ENSFALG00000002135 #22 ENSFALG00000025833 ENSFALG00000004924 ##22 ENSFALG00000023413 ENSFALG00000004913 #29 C10orf88 (ENSFALG00000028462) #31 ENSFALG00000004871 IKZF5 (ENSFALG00000004728) #33 ACADSB (ENSFALG00000024790) #34 HMX3 (ENSFALG00000026829) #35 BUB3 (ENSFALG00000004735) #37 ENSFALG00000028168 GPR26 (ENSFALG00000004740) CPXM2 (ENSFALG00000004744) CHST15 (ENSFALG00000004749) ENSFALG00000004758 OAT (ENSFALG00000004768) NKX1-2 (ENSFALG00000004783) Galloanserae DUPLICATION Galloanserae ANCESTRAL SPECIES ENSGT00950000183145.C.a ##22 Anatidae ANCESTRAL SPECIES 4 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000154525.b.a.c.a #29 ENSGT00950000183145.C.a ##22 ENSGT00940000163882.e.a ENSGT00940000154525.b.a.c.b #29 ENSGT00940000163882.f ENSGT00950000183145.C.b ##22 ENSGT00940000154525.b.a.d #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Pink-footed goose MODERN SPECIES 74 ENSABRG00000006774 ##22 ENSABRG00000006754 ENSABRG00000006728 #29 ENSABRG00000006699 ##22 CUZD1 (ENSABRG00000006669) #29 C10orf88 (ENSABRG00000006659) #31 ENSABRG00000006640 PSTK (ENSABRG00000006637) #32 IKZF5 (ENSABRG00000006630) #33 ACADSB (ENSABRG00000006622) #34 HMX3 (ENSABRG00000006612) #35 HMX2 (ENSABRG00000006606) #36 BUB3 (ENSABRG00000006598) #37 GPR26 (ENSABRG00000006566) CPXM2 (ENSABRG00000006558) CHST15 (ENSABRG00000006544) Galloanserae ANCESTRAL SPECIES 6 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882.e.a ENSGT00950000183145.C.b ##22 ENSGT00940000154525.b.a.c.b #29 ENSGT00940000163882.f ENSGT00940000154525.b.a.d #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Anatidae ANCESTRAL SPECIES 4 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000154525.b.a.c.a #29 ENSGT00950000183145.C.a ##22 ENSGT00940000163882.e.a ENSGT00940000154525.b.a.c.b #29 ENSGT00940000163882.f ENSGT00950000183145.C.b ##22 ENSGT00940000154525.b.a.d #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 Duck MODERN SPECIES 24 ENSAPLG00000021626 #9 ENSAPLG00000021679 #9 ENSAPLG00000028455 MCMBP (ENSAPLG00000009939) #10 ENSAPLG00000025076 #11 ENSAPLG00000018439 #11 PLPP4 (ENSAPLG00000011003) #12 WDR11 (ENSAPLG00000011124) #13 FGFR2 (ENSAPLG00000011952) #14 ATE1 (ENSAPLG00000012854) #15 NSMCE4A (ENSAPLG00000013184) #17 TACC2 (ENSAPLG00000013559) #18 PLEKHA1 (ENSAPLG00000013754) #20 HTRA1 (ENSAPLG00000014182) #21 ENSAPLG00000017490 #29 ENSAPLG00000028379 ##22 ENSAPLG00000022800 #29 ENSAPLG00000002332 C10orf88 (ENSAPLG00000018529) #31 ENSAPLG00000015412 PSTK (ENSAPLG00000015335) #32 IKZF5 (ENSAPLG00000015301) #33 ACADSB (ENSAPLG00000015129) #34 HMX3 (ENSAPLG00000025450) #35 BUB3 (ENSAPLG00000014959) #37 GPR26 (ENSAPLG00000014879) ENSAPLG00000029693 ENSAPLG00000014617 OAT (ENSAPLG00000015424) NKX1-2 (ENSAPLG00000018196) LHPP (ENSAPLG00000015176) Pink-footed goose MODERN SPECIES 74 ENSABRG00000006774 ##22 ENSABRG00000006754 ENSABRG00000006728 #29 ENSABRG00000006699 ##22 CUZD1 (ENSABRG00000006669) #29 C10orf88 (ENSABRG00000006659) #31 ENSABRG00000006640 PSTK (ENSABRG00000006637) #32 IKZF5 (ENSABRG00000006630) #33 ACADSB (ENSABRG00000006622) #34 HMX3 (ENSABRG00000006612) #35 HMX2 (ENSABRG00000006606) #36 BUB3 (ENSABRG00000006598) #37 GPR26 (ENSABRG00000006566) CPXM2 (ENSABRG00000006558) CHST15 (ENSABRG00000006544) OAT (ENSABRG00000006520) NKX1-2 (ENSABRG00000006517) ENSABRG00000006514 Phasianidae ANCESTRAL SPECIES 6 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00940000163882.e.a ENSGT00950000183145.C.b ##22 ENSGT00940000163882.f ENSGT00950000183145.A.b.a ##22 ENSGT00940000154525.b.a.d #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Japanese quail DUPLICATION Japanese quail DUPLICATION Japanese quail MODERN SPECIES 24 BAG3 (ENSCJPG00005020144) #8 INPP5F (ENSCJPG00005020145) #9 MCMBP (ENSCJPG00005020146) #10 SEC23IP (ENSCJPG00005020147) #11 PLPP4 (ENSCJPG00005020152) #12 WDR11 (ENSCJPG00005020153) #13 FGFR2 (ENSCJPG00005020154) #14 ATE1 (ENSCJPG00005020156) #15 NSMCE4A (ENSCJPG00005020157) #17 TACC2 (ENSCJPG00005020158) #18 PLEKHA1 (ENSCJPG00005020159) #20 HTRA1 (ENSCJPG00005020160) #21 ENSCJPG00005020161 #29 ENSCJPG00005020162 ENSCJPG00005020163 ##22 ENSCJPG00005020164 ##22 ENSCJPG00005020166 C10orf88 (ENSCJPG00005020167) #31 ENSCJPG00005020168 PSTK (ENSCJPG00005020169) #32 IKZF5 (ENSCJPG00005020170) #33 ACADSB (ENSCJPG00005020171) #34 HMX3 (ENSCJPG00005020174) #35 HMX2 (ENSCJPG00005020175) #36 BUB3 (ENSCJPG00005020176) #37 GPR26 (ENSCJPG00005020183) CPXM2 (ENSCJPG00005020184) CHST15 (ENSCJPG00005000893) OAT (ENSCJPG00005000924) ENSCJPG00005000989 LHPP (ENSCJPG00005001010) Japanese quail MODERN SPECIES 23 RNH1 (ENSCJPG00005018469) CHKA (ENSCJPG00005018468) KMT5B (ENSCJPG00005018467) ENSCJPG00005018466 LRP5 (ENSCJPG00005018446) PPP6R3 (ENSCJPG00005018445) GAL (ENSCJPG00005018444) CPT1A (ENSCJPG00005018027) ENSCJPG00005018026 ENSCJPG00005018025 ENSCJPG00005017827 ENSCJPG00005017814 RAB3IL1 (ENSCJPG00005017813) BEST1 (ENSCJPG00005017812) ENSCJPG00005017811 ENSCJPG00005017810 ##22 MPEG1 (ENSCJPG00005017809) DTX4 (ENSCJPG00005017808) CNTF (ENSCJPG00005017807) ZFP91 (ENSCJPG00005017806) LPXN (ENSCJPG00005017802) CTNND1 (ENSCJPG00005017712) ENSCJPG00005017711 TMX2 (ENSCJPG00005017710) MED19 (ENSCJPG00005017709) ZDHHC5 (ENSCJPG00005017610) CLP1 (ENSCJPG00005017609) YPEL4 (ENSCJPG00005017608) SERPING1 (ENSCJPG00005017605) ENSCJPG00005017604 TIMM10 (ENSCJPG00005017603) Japanese quail MODERN SPECIES 24 ENSCJPG00005020143 BAG3 (ENSCJPG00005020144) #8 INPP5F (ENSCJPG00005020145) #9 MCMBP (ENSCJPG00005020146) #10 SEC23IP (ENSCJPG00005020147) #11 PLPP4 (ENSCJPG00005020152) #12 WDR11 (ENSCJPG00005020153) #13 FGFR2 (ENSCJPG00005020154) #14 ATE1 (ENSCJPG00005020156) #15 NSMCE4A (ENSCJPG00005020157) #17 TACC2 (ENSCJPG00005020158) #18 PLEKHA1 (ENSCJPG00005020159) #20 HTRA1 (ENSCJPG00005020160) #21 ENSCJPG00005020161 #29 ENSCJPG00005020162 ENSCJPG00005020163 ##22 ENSCJPG00005020164 ##22 ENSCJPG00005020166 C10orf88 (ENSCJPG00005020167) #31 ENSCJPG00005020168 PSTK (ENSCJPG00005020169) #32 IKZF5 (ENSCJPG00005020170) #33 ACADSB (ENSCJPG00005020171) #34 HMX3 (ENSCJPG00005020174) #35 HMX2 (ENSCJPG00005020175) #36 BUB3 (ENSCJPG00005020176) #37 GPR26 (ENSCJPG00005020183) CPXM2 (ENSCJPG00005020184) CHST15 (ENSCJPG00005000893) OAT (ENSCJPG00005000924) ENSCJPG00005000989 Phasianidae_b ANCESTRAL SPECIES ENSGT00950000183145.C.b ##22 Turkey DUPLICATION Turkey MODERN SPECIES 28 ENSMGAG00000011703 ABRAXAS2 (ENSMGAG00000011692) ENSMGAG00000011686 ENSMGAG00000011677 ENSMGAG00000011675 ENSMGAG00000011673 ENSMGAG00000011662 GPR26 (ENSMGAG00000011624) ENSMGAG00000011617 #36 ENSMGAG00000011619 #37 HMX3 (ENSMGAG00000011613) #35 ACADSB (ENSMGAG00000011603) #34 ENSMGAG00000017710 #32 ENSMGAG00000011599 #33 ENSMGAG00000011584 ENSMGAG00000011564 ##22 ENSMGAG00000022374 ##22 ENSMGAG00000011568 #29 ENSMGAG00000011580 #31 ENSMGAG00000011551 #21 ENSMGAG00000011530 #20 ENSMGAG00000011516 #18 ENSMGAG00000011490 #15 ENSMGAG00000011508 ENSMGAG00000011456 #14 ENSMGAG00000022256 #13 ENSMGAG00000018783 #13 ENSMGAG00000011434 #12 SEC23IP (ENSMGAG00000011411) #11 ENSMGAG00000017041 #9 ENSMGAG00000011398 #10 Turkey MODERN SPECIES 32 ENSMGAG00000018813 ##22 Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES 68 PLPP4 (ENSCPRG00005010400) #12 WDR11 (ENSCPRG00005010238) #13 FGFR2 (ENSCPRG00005010191) #14 ATE1 (ENSCPRG00005010141) #15 NSMCE4A (ENSCPRG00005010129) #17 TACC2 (ENSCPRG00005010117) #18 ENSCPRG00005010107 BTBD16 (ENSCPRG00005010103) #19 PLEKHA1 (ENSCPRG00005010094) #20 HTRA1 (ENSCPRG00005010065) #21 ENSCPRG00005010058 ##22 ENSCPRG00005010028 ENSCPRG00005010020 ENSCPRG00005010017 ##22 ENSCPRG00005010015 ##22 ENSCPRG00005010013 ##22 ENSCPRG00005009997 CUZD1 (ENSCPRG00005009971) #29 C10orf88 (ENSCPRG00005009963) #31 ENSCPRG00005009952 PSTK (ENSCPRG00005009943) #32 IKZF5 (ENSCPRG00005009941) #33 ENSCPRG00005009939 ACADSB (ENSCPRG00005009928) #34 HMX3 (ENSCPRG00005009925) #35 HMX2 (ENSCPRG00005009921) #36 BUB3 (ENSCPRG00005009920) #37 GPR26 (ENSCPRG00005009894) CPXM2 (ENSCPRG00005009835) ENSCPRG00005009822 CHST15 (ENSCPRG00005009813) Australian saltwater crocodile MODERN SPECIES 68 SEC23IP (ENSCPRG00005010423) #11 ENSCPRG00005010403 PLPP4 (ENSCPRG00005010400) #12 WDR11 (ENSCPRG00005010238) #13 FGFR2 (ENSCPRG00005010191) #14 ATE1 (ENSCPRG00005010141) #15 NSMCE4A (ENSCPRG00005010129) #17 TACC2 (ENSCPRG00005010117) #18 ENSCPRG00005010107 BTBD16 (ENSCPRG00005010103) #19 PLEKHA1 (ENSCPRG00005010094) #20 HTRA1 (ENSCPRG00005010065) #21 ENSCPRG00005010058 ##22 ENSCPRG00005010028 ENSCPRG00005010020 ENSCPRG00005010017 ##22 ENSCPRG00005010015 ##22 ENSCPRG00005010013 ##22 ENSCPRG00005009997 CUZD1 (ENSCPRG00005009971) #29 C10orf88 (ENSCPRG00005009963) #31 ENSCPRG00005009952 PSTK (ENSCPRG00005009943) #32 IKZF5 (ENSCPRG00005009941) #33 ENSCPRG00005009939 ACADSB (ENSCPRG00005009928) #34 HMX3 (ENSCPRG00005009925) #35 HMX2 (ENSCPRG00005009921) #36 BUB3 (ENSCPRG00005009920) #37 GPR26 (ENSCPRG00005009894) CPXM2 (ENSCPRG00005009835) Cryptodira ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Testudinoidea ANCESTRAL SPECIES 263 ENSGT00950000183145.C ##22 ENSGT00940000163882.c Emydidae ANCESTRAL SPECIES 355 ENSGT00950000183145.C ##22 ENSGT00940000163882.c Three-toed box turtle MODERN SPECIES 39 TIAL1 (ENSTMTG00000018217) #7 ENSTMTG00000018249 #8 ENSTMTG00000018261 #8 INPP5F (ENSTMTG00000018304) #9 MCMBP (ENSTMTG00000018812) #10 SEC23IP (ENSTMTG00000018842) #11 PLPP4 (ENSTMTG00000018885) #12 WDR11 (ENSTMTG00000018901) #13 FGFR2 (ENSTMTG00000018950) #14 ATE1 (ENSTMTG00000018984) #15 NSMCE4A (ENSTMTG00000019033) #17 ENSTMTG00000019055 #18 BTBD16 (ENSTMTG00000019086) #19 PLEKHA1 (ENSTMTG00000019123) #20 HTRA1 (ENSTMTG00000019179) #21 ENSTMTG00000019204 ##22 ENSTMTG00000019231 ENSTMTG00000019289 C10orf88 (ENSTMTG00000019303) #31 PSTK (ENSTMTG00000019320) #32 IKZF5 (ENSTMTG00000019326) #33 ACADSB (ENSTMTG00000019334) #34 HMX3 (ENSTMTG00000019354) #35 HMX2 (ENSTMTG00000019363) #36 BUB3 (ENSTMTG00000019371) #37 GPR26 (ENSTMTG00000019385) ENSTMTG00000019402 ENSTMTG00000019417 CHST15 (ENSTMTG00000019442) OAT (ENSTMTG00000019462) NKX1-2 (ENSTMTG00000019477) Testudinidae ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Abingdon island giant tortoise MODERN SPECIES 2009 ENSCABG00000006138 ENSCABG00000006139 ATF5 (ENSCABG00000006142) LIG1 (ENSCABG00000006177) ZSWIM9 (ENSCABG00000007952) ENSCABG00000007953 ENSCABG00000007955 ZNF628 (ENSCABG00000007959) NAT14 (ENSCABG00000007962) ENSCABG00000007965 ##22 SBK3 (ENSCABG00000007970) ENSCABG00000007974 ENSCABG00000007976 ENSCABG00000007977 ENSCABG00000007980 ENSCABG00000007982 GEMIN7 (ENSCABG00000007984) CLASRP (ENSCABG00000007986) RELB (ENSCABG00000007988) CLPTM1 (ENSCABG00000007989) ENSCABG00000007990 ERCC1 (ENSCABG00000007991) PPP1R37 (ENSCABG00000007999) ENSCABG00000008004 NKPD1 (ENSCABG00000008005) Lepidosauria ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Episquamata ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Toxicofera ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Lizard MODERN SPECIES 849 ENSACAG00000023869 ENSACAG00000017822 ENSACAG00000034662 ENSACAG00000040744 ENSACAG00000025055 ENSACAG00000034964 ENSACAG00000045150 ENSACAG00000029165 ENSACAG00000017814 ENSACAG00000017812 ZP1 (ENSACAG00000017805) PRPF19 (ENSACAG00000017797) TMEM109 (ENSACAG00000045544) TMEM132A (ENSACAG00000017785) SLC15A3 (ENSACAG00000017784) ENSACAG00000017783 ##22 ENSACAG00000028471 VPS37C (ENSACAG00000017779) ENSACAG00000017772 VWCE (ENSACAG00000017769) DDB1 (ENSACAG00000017758) TKFC (ENSACAG00000017750) CYB561A3 (ENSACAG00000017746) TMEM138 (ENSACAG00000017745) ENSACAG00000017739 PPP1R32 (ENSACAG00000017727) ENSACAG00000017725 SYT7 (ENSACAG00000017713) ENSACAG00000040128 DAGLA (ENSACAG00000017695) MYRF (ENSACAG00000017691) Laterata ANCESTRAL SPECIES ENSGT00940000161426 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 ENSGT00940000159002 Argentine black and white tegu DUPLICATION Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 58 ENSSMRG00000004482 ##22 ENSSMRG00000004488 ##22 ENSSMRG00000004505 ##22 C10orf88 (ENSSMRG00000004535) #31 ENSSMRG00000004550 PSTK (ENSSMRG00000004569) #32 IKZF5 (ENSSMRG00000004571) #33 ACADSB (ENSSMRG00000004574) #34 HMX3 (ENSSMRG00000004577) #35 HMX2 (ENSSMRG00000004581) #36 BUB3 (ENSSMRG00000004592) #37 ENSSMRG00000004627 GPR26 (ENSSMRG00000004632) CPXM2 (ENSSMRG00000004643) CHST15 (ENSSMRG00000004684) OAT (ENSSMRG00000004707) Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 65 TIAL1 (ENSSMRG00000004608) #7 BAG3 (ENSSMRG00000004620) #8 INPP5F (ENSSMRG00000004622) #9 MCMBP (ENSSMRG00000004639) #10 SEC23IP (ENSSMRG00000005344) #11 PLPP4 (ENSSMRG00000005367) #12 WDR11 (ENSSMRG00000005374) #13 FGFR2 (ENSSMRG00000005415) #14 ATE1 (ENSSMRG00000005447) #15 ENSSMRG00000005469 TACC2 (ENSSMRG00000005489) #18 BTBD16 (ENSSMRG00000005515) #19 PLEKHA1 (ENSSMRG00000005536) #20 HTRA1 (ENSSMRG00000005544) #21 ENSSMRG00000005553 ##22 ENSSMRG00000005555 ##22 ENSSMRG00000005559 Argentine black and white tegu MODERN SPECIES 58 ENSSMRG00000004482 ##22 ENSSMRG00000004488 ##22 ENSSMRG00000004505 ##22 C10orf88 (ENSSMRG00000004535) #31 ENSSMRG00000004550 PSTK (ENSSMRG00000004569) #32 IKZF5 (ENSSMRG00000004571) #33 ACADSB (ENSSMRG00000004574) #34 HMX3 (ENSSMRG00000004577) #35 HMX2 (ENSSMRG00000004581) #36 BUB3 (ENSSMRG00000004592) #37 ENSSMRG00000004627 GPR26 (ENSSMRG00000004632) CPXM2 (ENSSMRG00000004643) CHST15 (ENSSMRG00000004684) OAT (ENSSMRG00000004707) NKX1-2 (ENSSMRG00000004710) Argentine black and white tegu MODERN SPECIES 65 ENSSMRG00000004590 TIAL1 (ENSSMRG00000004608) #7 BAG3 (ENSSMRG00000004620) #8 INPP5F (ENSSMRG00000004622) #9 MCMBP (ENSSMRG00000004639) #10 SEC23IP (ENSSMRG00000005344) #11 PLPP4 (ENSSMRG00000005367) #12 WDR11 (ENSSMRG00000005374) #13 FGFR2 (ENSSMRG00000005415) #14 ATE1 (ENSSMRG00000005447) #15 ENSSMRG00000005469 TACC2 (ENSSMRG00000005489) #18 BTBD16 (ENSSMRG00000005515) #19 PLEKHA1 (ENSSMRG00000005536) #20 HTRA1 (ENSSMRG00000005544) #21 ENSSMRG00000005553 ##22 ENSSMRG00000005555 ##22 ENSSMRG00000005559 Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth MODERN SPECIES 252 ENSLACG00000004881 LACTBL1 (ENSLACG00000008696) ENSLACG00000009372 ##22 ENSLACG00000010680 ENSLACG00000011813 ENSLACG00000013121 ##22 PHC2 (ENSLACG00000014173) ENSLACG00000014695 ENSLACG00000015265 ##22 rap1gapa (ENSLACG00000015738) alpl (ENSLACG00000017157) alpl (ENSLACG00000017187) ECE1 (ENSLACG00000017425) ENSLACG00000017443 EIF4G3 (ENSLACG00000017636) HP1BP3 (ENSLACG00000017868) SH2D5 (ENSLACG00000017939) KIF17 (ENSLACG00000017977) CLDN19 (ENSLACG00000018062) ENSLACG00000018111 YBX1 (ENSLACG00000018135) PPIH (ENSLACG00000018153) ENSLACG00000018183 ela3l (ENSLACG00000018193) Coelacanth MODERN SPECIES 252 ENSLACG00000004881 LACTBL1 (ENSLACG00000008696) ENSLACG00000009372 ##22 ENSLACG00000010680 ENSLACG00000011813 ENSLACG00000013121 ##22 PHC2 (ENSLACG00000014173) ENSLACG00000014695 ENSLACG00000015265 ##22 rap1gapa (ENSLACG00000015738) alpl (ENSLACG00000017157) alpl (ENSLACG00000017187) ECE1 (ENSLACG00000017425) ENSLACG00000017443 EIF4G3 (ENSLACG00000017636) HP1BP3 (ENSLACG00000017868) SH2D5 (ENSLACG00000017939) KIF17 (ENSLACG00000017977) Coelacanth MODERN SPECIES 252 ENSLACG00000004881 LACTBL1 (ENSLACG00000008696) ENSLACG00000009372 ##22 ENSLACG00000010680 ENSLACG00000011813 ENSLACG00000013121 ##22 PHC2 (ENSLACG00000014173) ENSLACG00000014695 ENSLACG00000015265 ##22 rap1gapa (ENSLACG00000015738) alpl (ENSLACG00000017157) alpl (ENSLACG00000017187) ECE1 (ENSLACG00000017425) ENSLACG00000017443 EIF4G3 (ENSLACG00000017636) HP1BP3 (ENSLACG00000017868) SH2D5 (ENSLACG00000017939) KIF17 (ENSLACG00000017977) CLDN19 (ENSLACG00000018062) ENSLACG00000018111 YBX1 (ENSLACG00000018135) Coelacanth MODERN SPECIES 2795 ENSLACG00000003912 ##22 Coelacanth DUPLICATION Coelacanth DUPLICATION Coelacanth MODERN SPECIES 2302 APEX2 (ENSLACG00000000865) CXXC1 (ENSLACG00000001387) ZNF628 (ENSLACG00000003033) ENSLACG00000004185 ENSLACG00000006641 ##22 Coelacanth MODERN SPECIES 3354 RBP5 (ENSLACG00000001425) CLSTN3 (ENSLACG00000002557) ENSLACG00000004071 ##22 Coelacanth MODERN SPECIES 3343 ENSLACG00000000750 ##22 Actinopterygii ANCESTRAL SPECIES 1194 ENSGT00950000183145.C ##22 ENSGT00950000183145.A.a ##22 Reedfish MODERN SPECIES 10 ENSECRG00000001753 ltb4r (ENSECRG00000001744) ltb4r (ENSECRG00000001733) ENSECRG00000001713 ENSECRG00000001697 sdr39u1 (ENSECRG00000001677) ENSECRG00000001650 slc12a10.3 (ENSECRG00000001500) ENSECRG00000001411 ENSECRG00000001387 ENSECRG00000001359 ENSECRG00000001278 ENSECRG00000001170 ENSECRG00000001098 ENSECRG00000000953 ENSECRG00000000847 ##22 zgc:171579 (ENSECRG00000000829) ENSECRG00000000809 ENSECRG00000000791 ENSECRG00000000783 ENSECRG00000000772 ENSECRG00000000757 ENSECRG00000000745 ENSECRG00000000732 ENSECRG00000000721 ENSECRG00000000705 ENSECRG00000000695 ENSECRG00000000680 ENSECRG00000000666 ENSECRG00000000659 ENSECRG00000000646 Neopterygii ANCESTRAL SPECIES 235 ENSGT00940000161462 ENSGT00930000151038 ENSGT00940000157751 ENSGT00390000017282 ENSGT00940000159740 ENSGT00730000112261 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934 ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT00980000199297 ENSGT00940000156408 ENSGT00950000183145.C ##22 ENSGT00390000006173 Osteoglossocephalai ANCESTRAL SPECIES 151 ENSGT00950000183108.b.a.b ENSGT00950000182991.A.a.c.a.b ENSGT00390000014242.l ENSGT00940000161462 ENSGT00930000151038 ENSGT00390000017282 ENSGT00940000159740 ENSGT00730000112261 ENSGT00940000164400 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT00980000199297 ENSGT00940000156408 ENSGT00950000183145.C ##22 ENSGT00390000006173 Osteoglossiformes ANCESTRAL SPECIES 20 ENSGT00390000000521 ENSGT00940000153801.b ENSGT00950000183108.b.a.b ENSGT00390000014242.l ENSGT00940000161462 ENSGT00930000151038 ENSGT00390000017282 ENSGT00940000159740 ENSGT00730000112261 ENSGT00940000164400 ENSGT00940000156934.l ENSGT00530000063829.A.i ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT00940000156408 ENSGT00950000183145.C ##22 ENSGT00390000006173 ENSGT01030000234822 ENSGT00940000160140.a.b ENSGT00520000055634.a.e P. kingsleyae MODERN SPECIES 1 ENSPKIG00000012701 ##22 ENSPKIG00000012735 gdf6a (ENSPKIG00000012754) SYBU (ENSPKIG00000012768) EBAG9 (ENSPKIG00000012789) ENY2 (ENSPKIG00000012828) TRHR (ENSPKIG00000012858) TMEM74 (ENSPKIG00000012866) emc2 (ENSPKIG00000012898) EIF3E (ENSPKIG00000012995) RSPO2 (ENSPKIG00000013040) ENSPKIG00000013061 ENSPKIG00000013112 ENSPKIG00000013237 ENSPKIG00000013258 zgc:91890 (ENSPKIG00000013291) Clupeocephala ANCESTRAL SPECIES 19 ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Euteleosteomorpha ANCESTRAL SPECIES 12 ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000160519.a.b ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Acanthomorphata ANCESTRAL SPECIES 108 ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000162741 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000160519.a.b ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Cod MODERN SPECIES 21 ENSGMOG00000020117 ENSGMOG00000018632 ENSGMOG00000018593 ENSGMOG00000018566 ENSGMOG00000018551 ENSGMOG00000034805 ENSGMOG00000018531 ENSGMOG00000031815 ENSGMOG00000027783 ENSGMOG00000026533 ENSGMOG00000018506 ENSGMOG00000012123 ENSGMOG00000012121 ENSGMOG00000022941 ENSGMOG00000023324 ENSGMOG00000035848 ##22 ENSGMOG00000022448 ##22 ENSGMOG00000025397 ##22 ENSGMOG00000024875 ##22 ENSGMOG00000013289 ENSGMOG00000008152 ENSGMOG00000000536 ENSGMOG00000013992 ENSGMOG00000014041 ENSGMOG00000014082 ENSGMOG00000002104 ENSGMOG00000014218 ENSGMOG00000016516 ENSGMOG00000024488 ENSGMOG00000014109 ENSGMOG00000035897 Euacanthomorphacea ANCESTRAL SPECIES 24 ENSGT00400000024746 ENSGT00950000183029.B.j.d ENSGT00940000162741 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000160519.a.b ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Pinecone sodierfish MODERN SPECIES 2 eloa (ENSMMDG00005014413) ENSMMDG00005004363 ENSMMDG00005004386 rpl11 (ENSMMDG00005004396) srsf10b (ENSMMDG00005004405) gja9b (ENSMMDG00005004412) mycbp (ENSMMDG00005004420) ENSMMDG00005004431 ENSMMDG00005004480 ENSMMDG00005004742 slc9a1b (ENSMMDG00005004765) KDM1B (ENSMMDG00005004848) DPY19L4 (ENSMMDG00005005461) ints8 (ENSMMDG00005006147) CCNE2 (ENSMMDG00005006171) ENSMMDG00005006191 ##22 gdf6b (ENSMMDG00005006203) pkhd1l1.2 (ENSMMDG00005006239) ENSMMDG00005006295 nudcd1 (ENSMMDG00005006299) trhrb (ENSMMDG00005006308) TMEM74 (ENSMMDG00005006311) eif3eb (ENSMMDG00005006314) pleca (ENSMMDG00005006473) ENSMMDG00005015229 ENSMMDG00005015230 ENSMMDG00005015231 slc52a2 (ENSMMDG00005015232) ENSMMDG00005015233 nfatc1 (ENSMMDG00005015237) atp9b (ENSMMDG00005015304) Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00950000183029.A ENSGT00950000183029.B.j.d ENSGT00940000162741 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000160519.a.b ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Tiger tail seahorse MODERN SPECIES 382 TMC8 (ENSHCOG00000015222) TMC6 (ENSHCOG00000015176) aspscr1 (ENSHCOG00000015163) ENSHCOG00000015097 ENSHCOG00000015090 MAFG (ENSHCOG00000015051) ENSHCOG00000015027 SIRT7 (ENSHCOG00000015014) pcyt2 (ENSHCOG00000014983) gnav1 (ENSHCOG00000014948) npb (ENSHCOG00000014919) sgsh (ENSHCOG00000014883) slc26a11 (ENSHCOG00000014873) ENSHCOG00000014825 ENSHCOG00000014819 #26 ENSHCOG00000014812 ##22 ENSHCOG00000014808 ENSHCOG00000014800 nanos3 (ENSHCOG00000014790) ENSHCOG00000014716 mri1 (ENSHCOG00000014695) zgc:136864 (ENSHCOG00000000782) ENSHCOG00000014673 chrna6 (ENSHCOG00000014652) chrnb3a (ENSHCOG00000014637) ENSHCOG00000014622 DNAH6 (ENSHCOG00000014593) SCLT1 (ENSHCOG00000014455) zgc:77739 (ENSHCOG00000014444) ENSHCOG00000014431 pcdh10a (ENSHCOG00000014419) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000166197 ENSGT00690000103882 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000160519.a.b ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000164334 ENSGT00690000103882 ENSGT00940000162741 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000161029 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000164334 ENSGT00690000103882 ENSGT00940000162741 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT01030000235133.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000176110 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00950000183145.C ##22 ENSGT00940000157594 ENSGT00940000176110 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Cyprinodontoidei ANCESTRAL SPECIES 31 ENSGT01090000260093.b.f.o ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00950000183145.C ##22 ENSGT00940000157594 ENSGT00940000176110 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 ENSGT00940000159356.a.b Poeciliinae ANCESTRAL SPECIES 24 ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00950000182978.B ENSGT00940000164496.a.a ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT01090000260093.b.f.o ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00950000183145.C ##22 ENSGT00940000157594 ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 ENSGT00940000159356.a.b Platyfish MODERN SPECIES 4 ENSXMAG00000028561 ENSXMAG00000028082 ENSXMAG00000017971 eya3 (ENSXMAG00000017972) si:ch211-195b13.1 (ENSXMAG00000017993) smim13 (ENSXMAG00000019893) zc3h12ab (ENSXMAG00000025043) ENSXMAG00000029667 XKR8 (ENSXMAG00000021722) xkr8.3 (ENSXMAG00000005543) ENSXMAG00000021549 srsf4 (ENSXMAG00000005545) msto1 (ENSXMAG00000005548) ENSXMAG00000005562 ints8 (ENSXMAG00000005568) ENSXMAG00000027303 ##22 pkhd1l1.2 (ENSXMAG00000005407) nudcd1 (ENSXMAG00000005085) trhrb (ENSXMAG00000014745) eif3eb (ENSXMAG00000014733) pleca (ENSXMAG00000018031) ENSXMAG00000027496 ENSXMAG00000002149 ENSXMAG00000002150 slc52a2 (ENSXMAG00000029794) ENSXMAG00000002151 nfatc1 (ENSXMAG00000000761) atp9b (ENSXMAG00000000763) sall3b (ENSXMAG00000000798) ST3GAL1 (ENSXMAG00000021082) ENSXMAG00000020909 Oryzias ANCESTRAL SPECIES 23 ENSGT00940000166197 ENSGT00910000144211 ENSGT00950000183029.B.j.d ENSGT00940000164334 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000176110 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT01000000214440.A.a.b.a.g.a ENSGT00940000164559.A Oryzias_a ANCESTRAL SPECIES 18 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00950000183029.B.j.d ENSGT00940000164334 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00940000162855.a.a.a.b ENSGT00940000154843.F.d ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT01000000214440.A.a.b.a.g.a ENSGT00940000164559.A ENSGT00940000164926 Japanese Medaka HdrR MODERN SPECIES 2 ENSORLG00000007567 rpl11 (ENSORLG00000007578) ENSORLG00000025116 ENSORLG00000007585 eef1a (ENSORLG00000007614) ENSORLG00000007671 mycbp (ENSORLG00000027339) gja9b (ENSORLG00000007682) srsf10b (ENSORLG00000007691) ENSORLG00000007702 slc9a1b (ENSORLG00000007714) ENSORLG00000007724 KDM1B (ENSORLG00000007744) DPY19L4 (ENSORLG00000007771) ints8 (ENSORLG00000007855) ENSORLG00000027329 ##22 gdf6b (ENSORLG00000007867) ENSORLG00000007925 ENY2 (ENSORLG00000030402) nudcd1 (ENSORLG00000007957) trhrb (ENSORLG00000029082) TMEM74 (ENSORLG00000007970) pleca (ENSORLG00000007995) ENSORLG00000008003 ENSORLG00000008009 ENSORLG00000026217 slc52a2 (ENSORLG00000008027) ENSORLG00000008034 nfatc1 (ENSORLG00000008055) STX12 (ENSORLG00000008076) ENSORLG00000008080 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 1791 ENSOSIG00000012342 ##22 Chinese medaka MODERN SPECIES 136 ENSOSIG00000014250 rpl11 (ENSOSIG00000014249) ENSOSIG00000014229 eef1a1l1 (ENSOSIG00000014228) ENSOSIG00000014226 mycbp (ENSOSIG00000014223) gja9b (ENSOSIG00000014222) srsf10b (ENSOSIG00000014221) ENSOSIG00000014220 slc9a1b (ENSOSIG00000011703) ENSOSIG00000011691 KDM1B (ENSOSIG00000010422) DPY19L4 (ENSOSIG00000010418) ENSOSIG00000010415 ints8 (ENSOSIG00000009477) ENSOSIG00000009465 ##22 gdf6b (ENSOSIG00000009463) ENSOSIG00000009462 ENY2 (ENSOSIG00000009461) nudcd1 (ENSOSIG00000009206) trhrb (ENSOSIG00000009198) TMEM74 (ENSOSIG00000009196) pleca (ENSOSIG00000007698) ENSOSIG00000007672 ENSOSIG00000007669 ENSOSIG00000007666 slc52a2 (ENSOSIG00000007663) nfatc1 (ENSOSIG00000007660) STX12 (ENSOSIG00000007651) ENSOSIG00000007644 ENSOSIG00000007635 Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00950000183029.A ENSGT00940000164334 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT01030000235133 ENSGT00940000160519.a.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000161029 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b Cichlidae ANCESTRAL SPECIES 7 ENSGT00400000024746 ENSGT00950000183029.A ENSGT00940000164334 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000161029 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00400000024746 ENSGT00950000183029.A ENSGT00940000164334 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000161029 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00400000024746 ENSGT00950000183029.A ENSGT00940000164334 ENSGT00940000166232.e ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000161029 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b Haplochromini ANCESTRAL SPECIES 5 ENSGT00400000024746 ENSGT00950000183029.A ENSGT00940000164334 ENSGT00940000166232.e ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c Burton s mouthbrooder MODERN SPECIES 568 ENSHBUG00000017046 ENSHBUG00000017108 ENSHBUG00000017123 ENSHBUG00000017136 ENSHBUG00000017166 ENSHBUG00000017195 mycbp (ENSHBUG00000017241) gja9b (ENSHBUG00000017256) srsf10b (ENSHBUG00000017264) ENSHBUG00000017272 slc9a1b (ENSHBUG00000017310) ENSHBUG00000017356 KDM1B (ENSHBUG00000017496) DPY19L4 (ENSHBUG00000017538) ints8 (ENSHBUG00000017603) ENSHBUG00000017646 ##22 ENSHBUG00000017681 gdf6b (ENSHBUG00000017694) pkhd1l1.2 (ENSHBUG00000017910) ENY2 (ENSHBUG00000017955) nudcd1 (ENSHBUG00000000530) trhrb (ENSHBUG00000017993) TMEM74 (ENSHBUG00000017998) eif3eb (ENSHBUG00000018043) ENSHBUG00000018067 pleca (ENSHBUG00000018266) ENSHBUG00000018345 Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00950000183029.B.j.d ENSGT00950000183029.A ENSGT00940000164334 ENSGT00940000166232.e ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c P. nyererei MODERN SPECIES 388 ENSPNYG00000007379 rpl11 (ENSPNYG00000007331) ENSPNYG00000007306 ENSPNYG00000007288 ENSPNYG00000007263 ENSPNYG00000007251 mycbp (ENSPNYG00000007219) ENSPNYG00000007181 srsf10b (ENSPNYG00000007168) ENSPNYG00000007074 slc9a1b (ENSPNYG00000007054) ENSPNYG00000007008 KDM1B (ENSPNYG00000006929) DPY19L4 (ENSPNYG00000006850) ints8 (ENSPNYG00000006742) ENSPNYG00000006695 ##22 gdf6b (ENSPNYG00000006658) pkhd1l1.2 (ENSPNYG00000006487) ENY2 (ENSPNYG00000006447) nudcd1 (ENSPNYG00000006432) trhrb (ENSPNYG00000006378) TMEM74 (ENSPNYG00000006365) eif3eb (ENSPNYG00000006316) ENSPNYG00000006286 pleca (ENSPNYG00000005906) ENSPNYG00000005739 ENSPNYG00000005719 ENSPNYG00000005659 ENSPNYG00000005638 slc52a2 (ENSPNYG00000005627) ENSPNYG00000005598 Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00910000144211 ENSGT00950000183029.B.j.d ENSGT00940000164334 ENSGT00940000166232.e ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000161029 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b Zebra mbuna MODERN SPECIES 1104 ENSMZEG00005026107 rpl11 (ENSMZEG00005026109) ENSMZEG00005026110 ENSMZEG00005026112 ENSMZEG00005026116 mycbp (ENSMZEG00005026117) ENSMZEG00005026120 srsf10b (ENSMZEG00005026122) ENSMZEG00005026124 slc9a1b (ENSMZEG00005026126) ENSMZEG00005026131 KDM1B (ENSMZEG00005026135) DPY19L4 (ENSMZEG00005026139) ints8 (ENSMZEG00005026144) CCNE2 (ENSMZEG00005026150) ENSMZEG00005026151 ##22 gdf6b (ENSMZEG00005026152) ENSMZEG00005026153 pkhd1l1.2 (ENSMZEG00005026155) ENY2 (ENSMZEG00005026161) nudcd1 (ENSMZEG00005026166) trhrb (ENSMZEG00005026168) TMEM74 (ENSMZEG00005026173) eif3eb (ENSMZEG00005026174) pleca (ENSMZEG00005026181) ENSMZEG00005026198 ENSMZEG00005026199 ENSMZEG00005026200 ENSMZEG00005026202 ENSMZEG00005026204 slc52a2 (ENSMZEG00005026205) Pomacentridae ANCESTRAL SPECIES 103 ENSGT00950000183029.A ENSGT00940000164334 ENSGT00950000183029.B.j.d ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776.n ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c Bicolor damselfish MODERN SPECIES 915 ca4a (ENSSPAG00000018081) MTMR4 (ENSSPAG00000017987) hpda (ENSSPAG00000017926) RNF43 (ENSSPAG00000017881) ENSSPAG00000017870 supt4h1 (ENSSPAG00000017849) ENSSPAG00000017810 ENSSPAG00000017799 ENSSPAG00000017786 ##22 YWHAG (ENSSPAG00000017778) hspb1 (ENSSPAG00000017771) ENSSPAG00000017758 Pomacentridae_A ANCESTRAL SPECIES 117 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776.n ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a Amphiprion ANCESTRAL SPECIES 104 ENSGT00950000183029.B.j.d ENSGT00940000164334.e ENSGT00950000183029.A ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00970000193390.c.a.b.u.b.a ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776.n ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000166022.c ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a Orange clownfish MODERN SPECIES 8 ENSAPEG00000016322 ENSAPEG00000016361 ENSAPEG00000016381 rpl11 (ENSAPEG00000016389) ENSAPEG00000016421 eloa (ENSAPEG00000016461) pithd1 (ENSAPEG00000016489) lypla2 (ENSAPEG00000016511) sfpq (ENSAPEG00000016556) ENSAPEG00000016579 KDM1B (ENSAPEG00000016633) DPY19L4 (ENSAPEG00000016693) ints8 (ENSAPEG00000016771) ENSAPEG00000016877 CCNE2 (ENSAPEG00000016889) ENSAPEG00000016972 ##22 gdf6b (ENSAPEG00000017000) pkhd1l1.2 (ENSAPEG00000017059) ENY2 (ENSAPEG00000017519) nudcd1 (ENSAPEG00000017546) trhrb (ENSAPEG00000017589) TMEM74 (ENSAPEG00000017694) eif3eb (ENSAPEG00000017710) ENSAPEG00000017745 pleca (ENSAPEG00000017760) EPPK1 (ENSAPEG00000017862) ENSAPEG00000017885 ENSAPEG00000017927 slc52a2 (ENSAPEG00000017933) ENSAPEG00000017958 nfatc1 (ENSAPEG00000018010) Clown anemonefish MODERN SPECIES 966 DPY19L4 (ENSAOCG00000016537) ints8 (ENSAOCG00000016479) ENSAOCG00000016372 CCNE2 (ENSAOCG00000016354) ENSAOCG00000001121 ##22 Spiny chromis MODERN SPECIES 2484 ints8 (ENSAPOG00000017918) ENSAPOG00000017875 ENSAPOG00000017783 ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Eupercaria ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00490000043398 ENSGT00390000002428.a ENSGT00940000166197 ENSGT00910000144211 ENSGT00940000164334 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT01090000259987.b.a ENSGT00940000157827 ENSGT00940000159108 ENSGT00940000155137.a.b ENSGT00390000000878 ENSGT00390000014833 ENSGT00390000011295.b ENSGT00940000155602.q ENSGT00390000010145.c.b ENSGT00940000156347 ENSGT00440000034270.a.a ENSGT00390000011422 ENSGT00940000155519.qb.b.f ENSGT00390000008295.b Fugu MODERN SPECIES 3 pithd1 (ENSTRUG00000025313) eloa (ENSTRUG00000004133) ENSTRUG00000004371 rpl11 (ENSTRUG00000020944) ef-1a (ENSTRUG00000005066) ENSTRUG00000006072 mycbp (ENSTRUG00000023350) gja9b (ENSTRUG00000006302) ENSTRUG00000033169 ENSTRUG00000020508 slc9a1b (ENSTRUG00000006336) ENSTRUG00000026704 KDM1B (ENSTRUG00000004004) DPY19L4 (ENSTRUG00000006943) ints8 (ENSTRUG00000007434) ENSTRUG00000023770 ##22 gdf6b (ENSTRUG00000028197) ENSTRUG00000007871 ENSTRUG00000008153 sp4 (ENSTRUG00000008217) CDCA7L (ENSTRUG00000008420) RAPGEF5 (ENSTRUG00000008504) il-6 (ENSTRUG00000008735) TOMM7 (ENSTRUG00000008757) hycc1 (ENSTRUG00000008765) klhl7 (ENSTRUG00000008889) ENSTRUG00000009355 ENSTRUG00000009434 cspg5b (ENSTRUG00000031045) mrpl3 (ENSTRUG00000009650) ENSTRUG00000009867 Tetraodon MODERN SPECIES 15 ENSTNIG00000003754 rpl11 (ENSTNIG00000002616) ENSTNIG00000002617 ENSTNIG00000002618 ENSTNIG00000002619 ENSTNIG00000005728 mycbp (ENSTNIG00000005727) gja9b (ENSTNIG00000005726) slc9a1b (ENSTNIG00000005725) ENSTNIG00000005724 KDM1B (ENSTNIG00000019845) DPY19L4 (ENSTNIG00000004233) ints8 (ENSTNIG00000004234) ENSTNIG00000004235 ##22 ENSTNIG00000004139 ENSTNIG00000004138 pkhd1l1.2 (ENSTNIG00000005470) ENSTNIG00000019517 ENSTNIG00000002903 sp4 (ENSTNIG00000002904) CDCA7L (ENSTNIG00000002905) RAPGEF5 (ENSTNIG00000002906) ENSTNIG00000002544 hycc1 (ENSTNIG00000002543) klhl7 (ENSTNIG00000002542) ENSTNIG00000002541 ENSTNIG00000002540 cspg5b (ENSTNIG00000006435) mrpl3 (ENSTNIG00000006434) Eupecaria_A ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00910000144211 ENSGT00940000164334 ENSGT00400000024746 ENSGT00950000183029.B.j.d ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000161029 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00910000144211 ENSGT00940000164334 ENSGT00400000024746 ENSGT00950000183029.B.j.d ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000161029 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c European seabass MODERN SPECIES 22 pithd1 (ENSDLAG00005014758) eloa (ENSDLAG00005014745) ENSDLAG00005033309 rpl11 (ENSDLAG00005014702) ENSDLAG00005014694 ENSDLAG00005028494 ENSDLAG00005029407 ENSDLAG00005014126 ENSDLAG00005014132 ENSDLAG00005013511 ENSDLAG00005013490 ENSDLAG00005012001 DPY19L4 (ENSDLAG00005011843) ENSDLAG00005011742 CCNE2 (ENSDLAG00005011713) ENSDLAG00005011678 ##22 pkhd1l1.2 (ENSDLAG00005011328) ENY2 (ENSDLAG00005011304) nudcd1 (ENSDLAG00005011227) trhrb (ENSDLAG00005011218) TMEM74 (ENSDLAG00005011213) eif3eb (ENSDLAG00005011074) pleca (ENSDLAG00005010626) ENSDLAG00005028652 ENSDLAG00005027821 ENSDLAG00005010578 ENSDLAG00005010576 nfatc1 (ENSDLAG00005010540) sall3b (ENSDLAG00005009469) ENSDLAG00005009459 ENSDLAG00005009446 Perciformes ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Perciformes_a ANCESTRAL SPECIES 14 ENSGT00910000144211 ENSGT00950000183029.B.j.d ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000160519.a.b ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00950000182894.C.i ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00940000167880 ENSGT00940000176110 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b Pike perch MODERN SPECIES 8 TMC8 (ENSSLUG00000011774) TMC6 (ENSSLUG00000011795) NOTUM (ENSSLUG00000011812) aspscr1 (ENSSLUG00000011832) ENSSLUG00000011837 ENSSLUG00000011839 MAFG (ENSSLUG00000011872) ENSSLUG00000011877 SIRT7 (ENSSLUG00000011885) pcyt2 (ENSSLUG00000011895) gnav1 (ENSSLUG00000011932) npb (ENSSLUG00000011938) sgsh (ENSSLUG00000011945) slc26a11 (ENSSLUG00000011974) ENSSLUG00000012234 ENSSLUG00000012239 ##22 ENSSLUG00000012243 ENSSLUG00000012248 ENSSLUG00000012252 nanos3 (ENSSLUG00000012257) CC2D1A (ENSSLUG00000012303) mri1 (ENSSLUG00000012957) ENSSLUG00000012981 ENSSLUG00000013195 khsrp (ENSSLUG00000013199) DCAF15 (ENSSLUG00000013203) RFX1 (ENSSLUG00000013210) rln3b (ENSSLUG00000013218) TNPO2 (ENSSLUG00000013231) ENSSLUG00000013256 NHERF2 (ENSSLUG00000013266) Channel bull blenny MODERN SPECIES 2 rpl11 (ENSCGOG00000017530) ENSCGOG00000017593 ENSCGOG00000018194 mycbp (ENSCGOG00000018199) gja9b (ENSCGOG00000018200) ENSCGOG00000018202 slc9a1b (ENSCGOG00000018231) ENSCGOG00000004081 ENSCGOG00000004187 KDM1B (ENSCGOG00000004226) tekt1 (ENSCGOG00000004650) ENSCGOG00000004652 DPY19L4 (ENSCGOG00000004660) ints8 (ENSCGOG00000004741) CCNE2 (ENSCGOG00000005761) ENSCGOG00000005783 ##22 gdf6b (ENSCGOG00000005795) ENSCGOG00000005805 ENSCGOG00000005806 ENY2 (ENSCGOG00000005814) nudcd1 (ENSCGOG00000005821) trhrb (ENSCGOG00000005896) TMEM74 (ENSCGOG00000005898) eif3eb (ENSCGOG00000005905) pleca (ENSCGOG00000006091) ENSCGOG00000012831 ENSCGOG00000012835 ENSCGOG00000012839 ENSCGOG00000012847 ENSCGOG00000012882 ENSCGOG00000012910 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Carangaria ANCESTRAL SPECIES 14 ENSGT00950000183029.B.j.d ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00940000161029 ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000177098 ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a Pleuronectoidei ANCESTRAL SPECIES 33 ENSGT00950000183029.A ENSGT00940000164334 ENSGT00940000166232 ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000160519.a.b ENSGT01030000235133 ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Tongue sole MODERN SPECIES 9 ENSCSEG00000007982 ENSCSEG00000007992 ENSCSEG00000008004 ENSCSEG00000008011 ENSCSEG00000008033 mycbp (ENSCSEG00000008166) gja9b (ENSCSEG00000008175) ENSCSEG00000008184 srsf10b (ENSCSEG00000008199) ENSCSEG00000008220 slc9a1b (ENSCSEG00000008266) ENSCSEG00000008281 KDM1B (ENSCSEG00000008311) DPY19L4 (ENSCSEG00000008333) ints8 (ENSCSEG00000008358) ENSCSEG00000008546 ##22 gdf6b (ENSCSEG00000008556) pkhd1l1.2 (ENSCSEG00000008607) nudcd1 (ENSCSEG00000008976) ENY2 (ENSCSEG00000009001) trhrb (ENSCSEG00000009016) TMEM74 (ENSCSEG00000009039) eif3eb (ENSCSEG00000009047) pleca (ENSCSEG00000009105) ENSCSEG00000009393 ENSCSEG00000009400 ENSCSEG00000009415 ENSCSEG00000009464 slc52a2 (ENSCSEG00000009476) ENSCSEG00000009489 nfatc1 (ENSCSEG00000009516) Turbot DUPLICATION Turbot MODERN SPECIES 16 ggnbp2 (ENSSMAG00000000327) pigw (ENSSMAG00000000328) MYO19 (ENSSMAG00000000332) znhit3 (ENSSMAG00000034762) nupr1a (ENSSMAG00000000346) vkorc1l1 (ENSSMAG00000000351) ENSSMAG00000000354 ca4a (ENSSMAG00000000365) MTMR4 (ENSSMAG00000000372) hpda (ENSSMAG00000000394) ENSSMAG00000000408 ENSSMAG00000000413 supt4h1 (ENSSMAG00000037724) ENSSMAG00000000427 ENSSMAG00000000445 ##22 ENSSMAG00000000452 ##22 ENSSMAG00000022653 hspb1 (ENSSMAG00000000460) ENSSMAG00000000472 ENSSMAG00000000485 c1qbp (ENSSMAG00000000492) ENSSMAG00000000497 p2rx1 (ENSSMAG00000000512) camkk1a (ENSSMAG00000000541) ATP2A3 (ENSSMAG00000000561) ZZEF1 (ENSSMAG00000000586) cyb5d2 (ENSSMAG00000000640) ankfy1 (ENSSMAG00000000642) ube2g1a (ENSSMAG00000000657) SPNS2 (ENSSMAG00000000663) ruvbl2 (ENSSMAG00000021893) Turbot MODERN SPECIES 14 ENSSMAG00000018446 ENSSMAG00000018455 ENSSMAG00000018483 ENSSMAG00000018504 ENSSMAG00000018541 ENSSMAG00000018542 ENSSMAG00000018546 ENSSMAG00000024166 ENSSMAG00000018570 ENSSMAG00000018640 ENSSMAG00000018668 ENSSMAG00000018727 DPY19L4 (ENSSMAG00000018787) ENSSMAG00000018797 CCNE2 (ENSSMAG00000018828) ENSSMAG00000018863 ##22 gdf6b (ENSSMAG00000034246) pkhd1l1.2 (ENSSMAG00000018962) ENY2 (ENSSMAG00000019149) nudcd1 (ENSSMAG00000019172) trhrb (ENSSMAG00000019186) TMEM74 (ENSSMAG00000029795) eif3eb (ENSSMAG00000019198) pleca (ENSSMAG00000019256) ENSSMAG00000037956 ENSSMAG00000019596 ENSSMAG00000019614 slc52a2 (ENSSMAG00000019620) ENSSMAG00000019634 nfatc1 (ENSSMAG00000019637) atp9b (ENSSMAG00000019670) Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183145.C ##22 Northern pike MODERN SPECIES 9 pleca (ENSELUG00000018494) TMEM74 (ENSELUG00000010832) ENSELUG00000010814 trhrb (ENSELUG00000010802) nudcd1 (ENSELUG00000010779) eny2 (ENSELUG00000010747) gdf6b (ENSELUG00000010711) lrp12 (ENSELUG00000010699) ENSELUG00000031189 DPY19L4 (ENSELUG00000008483) ENSELUG00000034134 ENSELUG00000008394 ENSELUG00000008373 ints8 (ENSELUG00000008666) ENSELUG00000025297 ENSELUG00000008533 ##22 Salmoninae ANCESTRAL SPECIES 1292 ENSGT00390000007776 ENSGT00950000183145.C ##22 ENSGT00940000162108.a #26 Huchen MODERN SPECIES 72 nudcd1 (ENSHHUG00000035833) ENSHHUG00000035817 ##22 ZFPM2 (ENSHHUG00000035802) lrp12 (ENSHHUG00000035791) ENSHHUG00000035761 ENSHHUG00000035756 ndufv1 (ENSHHUG00000035750) ENSHHUG00000035747 ENSHHUG00000035740 ENSHHUG00000035738 ENSHHUG00000035729 ENSHHUG00000035726 znf687b (ENSHHUG00000035721) PSMD4 (ENSHHUG00000035707) ubap2l (ENSHHUG00000035629) ENSHHUG00000035616 ENSHHUG00000035601 Salmoninae_a ANCESTRAL SPECIES 139 ENSGT00940000165835.b.f ENSGT00730000111056.h.e ENSGT00940000158616.k.b ENSGT00940000155256.d.b.b.b ENSGT00950000182894.D.f ENSGT00940000160704.a.b ENSGT00940000157244.a.a ENSGT00390000007227.a.i ENSGT00940000160991.b.c.a ENSGT00390000018560.a.a.a.a.b.j.b ENSGT00940000171486.B ENSGT00940000157616.j.a.d ENSGT00940000162855.a.b ENSGT00940000162855.a.a.a.b.d ENSGT00390000007776 ENSGT00950000183145.C ##22 ENSGT00940000162108.a #26 Salmo ANCESTRAL SPECIES 125 ENSGT00940000165835.b.f ENSGT00730000111056.h.e ENSGT00940000158616.k.b ENSGT00940000155256.d.b.b.b ENSGT00950000182894.D.f ENSGT00940000160704.a.b ENSGT00940000157244.a.a ENSGT00390000007227.a.i ENSGT00940000160991.b.c.a ENSGT00390000018560.a.a.a.a.b.j.b ENSGT00940000171486.B ENSGT00940000157616.j.a.d ENSGT00940000162855.a.b ENSGT00940000162855.a.a.a.b.d ENSGT00390000007776 ENSGT00950000183145.C ##22 Atlantic salmon MODERN SPECIES 5 ENSSSAG00000118424 ENSSSAG00000039231 ENSSSAG00000039714 ENSSSAG00000040032 apoa1bp (ENSSSAG00000042880) ENSSSAG00000042887 ENSSSAG00000042912 ENSSSAG00000105704 ENSSSAG00000083470 ENSSSAG00000042963 ENSSSAG00000100073 ENSSSAG00000110063 ENSSSAG00000045559 ENSSSAG00000082337 ENSSSAG00000072561 ENSSSAG00000072574 ##22 ENSSSAG00000072580 ENSSSAG00000072588 ENSSSAG00000096527 ENSSSAG00000101611 ENSSSAG00000112416 ENSSSAG00000007200 colec12 (ENSSSAG00000010233) ENSSSAG00000098040 ENSSSAG00000090866 rabggtb (ENSSSAG00000006139) acadm (ENSSSAG00000006268) ENSSSAG00000040446 hectd3 (ENSSSAG00000006655) ENSSSAG00000077776 ENSSSAG00000097561 River trout MODERN SPECIES 29 lipea (ENSSTUG00000035734) SLC9A3 (ENSSTUG00000035842) ago3b (ENSSTUG00000036333) tekt2 (ENSSTUG00000037868) usf2 (ENSSTUG00000037986) LMNA (ENSSTUG00000038075) naxe (ENSSTUG00000038132) ENSSTUG00000038147 scn1bb (ENSSTUG00000038164) ENSSTUG00000038181 ENSSTUG00000038184 nfatc1 (ENSSTUG00000038206) ENSSTUG00000038234 pleca (ENSSTUG00000038313) nudcd1 (ENSSTUG00000039190) ENSSTUG00000039201 ##22 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 869 ENSGT00950000183145.C.m ##22 ENSGT00940000162108.a #26 Rainbow trout MODERN SPECIES 3 ENSOMYG00000009876 vkorc1l1 (ENSOMYG00000009766) ENSOMYG00000009305 ca4a (ENSOMYG00000009115) ENSOMYG00000051523 ENSOMYG00000060697 ENSOMYG00000008948 ENSOMYG00000068552 ENSOMYG00000073587 ENSOMYG00000008674 ENSOMYG00000008666 ENSOMYG00000074898 ENSOMYG00000057251 ENSOMYG00000008554 ENSOMYG00000059436 ENSOMYG00000056126 ##22 ENSOMYG00000012450 #26 YWHAG (ENSOMYG00000008503) ENSOMYG00000008495 hspb1 (ENSOMYG00000008479) ENSOMYG00000069715 SRRM3 (ENSOMYG00000008446) ENSOMYG00000008345 ENSOMYG00000008146 c1qbp (ENSOMYG00000008118) ENSOMYG00000008079 p2rx1 (ENSOMYG00000007959) camkk1a (ENSOMYG00000007760) ATP2A3 (ENSOMYG00000006908) ZZEF1 (ENSOMYG00000004390) ENSOMYG00000034806 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00940000161462.f ENSGT00930000151038.i.a ENSGT00390000017282.c.b ENSGT00940000154607.b.a.t ENSGT00940000159740.f ENSGT00730000112261.e ENSGT00940000164400.e ENSGT00940000156934.l.d ENSGT00530000063829.A.g ENSGT00940000164400.f ENSGT00940000156934.l.c ENSGT00530000063829.A.h ENSGT01030000234566.e.a.m ENSGT00510000048688.j ENSGT00940000156408.j.a ENSGT00950000183145.C.n.a ##22 ENSGT00940000162108.b.b.b #26 ENSGT01000000220550 ENSGT00510000051337.g.b.b ENSGT00940000167743.f ENSGT00390000004886.e ENSGT00390000017671.a.b.c ENSGT01010000230102 ENSGT00940000153195.B.o ENSGT01000000220276 ENSGT00650000094921.b ENSGT00940000155892.l ENSGT00390000018500.b.b.a.d.a ENSGT00940000156679.c.a ENSGT00390000017724.a.a.p ENSGT00940000156485.p Oncorhynchus_a ANCESTRAL SPECIES 765 ENSGT00940000156408.j.a ENSGT00950000183145.C.n.a ##22 Chinook salmon MODERN SPECIES 22 ENSOTSG00005020505 ARHGEF2 (ENSOTSG00005020515) ENSOTSG00005021290 ENSOTSG00005021301 pmvk (ENSOTSG00005022543) decr1 (ENSOTSG00005022544) CALB1 (ENSOTSG00005022545) pnp4b (ENSOTSG00005022618) ENSOTSG00005022619 ENSOTSG00005022620 aldh5a1 (ENSOTSG00005022622) dek (ENSOTSG00005023126) KCNV1 (ENSOTSG00005023127) gbp (ENSOTSG00005023128) plekhf2 (ENSOTSG00005023131) ENSOTSG00005023132 ##22 ENSOTSG00005023134 ENSOTSG00005023135 ENSOTSG00005023137 snrnp48 (ENSOTSG00005023144) herpud2 (ENSOTSG00005023145) ENSOTSG00005000126 bms1 (ENSOTSG00005000483) ENSOTSG00005000517 capn7 (ENSOTSG00005000519) sh3bp5b (ENSOTSG00005000529) mettl6 (ENSOTSG00005000533) eaf1 (ENSOTSG00005000539) bmper (ENSOTSG00005000550) tbx20 (ENSOTSG00005000703) dpy19l1l (ENSOTSG00005000708) Oncorhynchus ANCESTRAL SPECIES 40 ENSGT00940000158616.k.b ENSGT00940000155256.d.b.b.b ENSGT00950000182894.D.f ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000160704.a.b ENSGT00940000157244.a.a ENSGT00390000007227.a.i ENSGT00940000160991.b.c.a ENSGT00390000018560.a.a.a.a.b.j.b ENSGT00940000171486.B ENSGT00940000157616.j.a.d ENSGT00940000162855.a.b ENSGT00940000162855.a.a.a.b.d ENSGT00390000007776 ENSGT00950000183145.C.n.b ##22 Rainbow trout MODERN SPECIES 24 ENSOMYG00000049581 ENSOMYG00000063528 ENSOMYG00000070084 ENSOMYG00000006026 ENSOMYG00000011062 ENSOMYG00000057609 ENSOMYG00000069899 ENSOMYG00000028078 ENSOMYG00000070995 ENSOMYG00000042866 ENSOMYG00000064041 ENSOMYG00000057896 ENSOMYG00000005924 ENSOMYG00000070589 ENSOMYG00000048886 ENSOMYG00000068104 ##22 ENSOMYG00000005875 ENSOMYG00000061489 ENSOMYG00000053086 Oncorhynchus_a ANCESTRAL SPECIES 96 ENSGT00940000158616.k.b ENSGT00940000155256.d.b.b.b ENSGT00950000182894.D.f ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000160704.a.b ENSGT00940000157244.a.a ENSGT00390000007227.a.i ENSGT00940000160991.b.c.a ENSGT00390000018560.a.a.a.a.b.j.b ENSGT00940000171486.B ENSGT00940000157616.j.a.d ENSGT00940000162855.a.b ENSGT00940000162855.a.a.a.b.d ENSGT00390000007776 ENSGT00950000183145.C.n.b ##22 Coho salmon MODERN SPECIES 5 ENSOKIG00005028344 lipea (ENSOKIG00005028637) SLC9A3 (ENSOKIG00005028753) ago3b (ENSOKIG00005029298) tekt2 (ENSOKIG00005033761) usf2 (ENSOKIG00005033816) LMNA (ENSOKIG00005033932) naxe (ENSOKIG00005034017) ENSOKIG00005034033 SCN1B (ENSOKIG00005034056) ENSOKIG00005034070 NFATC1 (ENSOKIG00005034093) ENSOKIG00005034202 pleca (ENSOKIG00005034467) nudcd1 (ENSOKIG00005036764) ENSOKIG00005036841 ##22 crabp2b (ENSOKIG00005004269) ciarta (ENSOKIG00005004335) rprd2a (ENSOKIG00005004354) celf3a (ENSOKIG00005004421) cers2a (ENSOKIG00005004568) CLK2 (ENSOKIG00005004660) ENSOKIG00005005339 dnajc8 (ENSOKIG00005005373) HNRNPR (ENSOKIG00005005911) ENSOKIG00005006097 ADGRB1 (ENSOKIG00005006116) HERPUD2 (ENSOKIG00005006148) SLC4A7 (ENSOKIG00005006260) EOMES (ENSOKIG00005006754) ENSOKIG00005006776 Chinook salmon MODERN SPECIES 24 lipea (ENSOTSG00005004221) ENSOTSG00005004222 SLC9A3 (ENSOTSG00005004232) ago3b (ENSOTSG00005004739) tekt2 (ENSOTSG00005010547) usf2 (ENSOTSG00005010551) LMNA (ENSOTSG00005010591) naxe (ENSOTSG00005010675) ENSOTSG00005010681 scn1bb (ENSOTSG00005010684) ENSOTSG00005010687 sall3b (ENSOTSG00005010691) nfatc1 (ENSOTSG00005010695) pleca (ENSOTSG00005010762) nudcd1 (ENSOTSG00005044911) ENSOTSG00005044912 ##22 ENSOTSG00005044915 Otomorpha ANCESTRAL SPECIES 9 ENSGT00950000183163.a.a.bb ENSGT00950000182941.a.a.b.e.b ENSGT00390000011598 ENSGT00390000015257 ENSGT00950000183028.a.b.b ENSGT00390000017974.ob ENSGT01090000260070.C.b ENSGT00940000154450.tc ENSGT00940000164147.b ENSGT00940000156338.b ENSGT00390000014274 ENSGT00940000157751 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 Otophysi ANCESTRAL SPECIES 260 ENSGT00940000163253.a.a.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 ENSGT00940000159356.a.b Cyprinoidei ANCESTRAL SPECIES 25 ENSGT00510000048725 ENSGT00940000157911 ENSGT00940000155519.qb.a ENSGT01030000235108 ENSGT00940000160525 ENSGT00390000017282 ENSGT00940000159740 ENSGT00730000112261 ENSGT00940000164400 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT01050000244937.b ENSGT00940000156408 ENSGT00950000183145.C ##22 ENSGT00390000006173 ENSGT00940000156679 ENSGT00940000157815.a ENSGT01030000234912.a ENSGT00390000018131 ENSGT00940000165475 ENSGT00510000047616.b ENSGT00940000157131.b ENSGT00940000157527.a ENSGT00940000155488.m.b.a.b.a ENSGT00940000157880.g.a ENSGT00390000003114.e.b.b ENSGT00390000001296 ENSGT00390000012690.a ENSGT00940000155721.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 701 ENSGT00390000017282.b ENSGT00940000159740.d ENSGT00730000112261.a.b ENSGT00940000164400.b ENSGT00940000156934.l.b ENSGT00530000063829.A.e ENSGT01030000234566.e.a.k ENSGT00510000048688.k ENSGT00940000156408.l ENSGT00950000183145.C.o ##22 ENSGT00390000006173.a.b ENSGT00940000157815.a.b Cyprininae_a ANCESTRAL SPECIES 264 ENSGT00940000155519.qb.a.a ENSGT00940000160525.`b ENSGT01010000222294.c.a.ib.b.b ENSGT00940000157687.a.b ENSGT01030000234856 ENSGT00940000158130.i.b ENSGT00390000017282.b ENSGT00940000159740.d ENSGT00730000112261.a.b ENSGT00940000164400.b ENSGT00940000156934.l.b ENSGT00530000063829.A.e ENSGT01030000234566.e.a.k ENSGT00510000048688.k ENSGT00940000156408.l ENSGT00950000183145.C.o ##22 ENSGT00390000006173.a.b ENSGT00940000157815.a.b Common carp reference MODERN SPECIES 2 cmtm6 (ENSCCRG00000071916) ENSCCRG00000024902 ENSCCRG00000014829 sc:d156 (ENSCCRG00000033047) ptpn23a (ENSCCRG00000063956) ENSCCRG00000031389 dek (ENSCCRG00000014677) ENSCCRG00000056963 gbp (ENSCCRG00000071487) ENSCCRG00000014685 ccne2 (ENSCCRG00000078618) tp53inp1 (ENSCCRG00000061054) nagpa (ENSCCRG00000002663) NDUFAF6 (ENSCCRG00000002685) plekhf2 (ENSCCRG00000069352) ENSCCRG00000002744 ##22 ENSCCRG00000079847 rspo3 (ENSCCRG00000073816) ENSCCRG00000065107 cenpw (ENSCCRG00000060394) trmt11 (ENSCCRG00000011438) ENSCCRG00000076658 hint3 (ENSCCRG00000003817) rbms3 (ENSCCRG00000069859) TGFBR2 (ENSCCRG00000007325) stt3b (ENSCCRG00000029252) OSBPL10 (ENSCCRG00000073296) gpd1l (ENSCCRG00000030522) tmem42a (ENSCCRG00000065066) zgc:77056 (ENSCCRG00000008222) zdhhc3a (ENSCCRG00000052289) Goldfish MODERN SPECIES 35 mios (ENSCARG00000052288) ENSCARG00000052520 slc25a32b (ENSCARG00000052804) CTHRC1 (ENSCARG00000052835) CSMD3 (ENSCARG00000052896) EIF3H (ENSCARG00000053281) rad21a (ENSCARG00000053459) dnali1 (ENSCARG00000053630) SNIP1 (ENSCARG00000053687) ENSCARG00000053726 ccne2 (ENSCARG00000053887) tp53inp1 (ENSCARG00000053899) nagpa (ENSCARG00000053947) NDUFAF6 (ENSCARG00000053995) plekhf2 (ENSCARG00000054099) ENSCARG00000054108 ##22 ENSCARG00000054153 rspo3 (ENSCARG00000054170) ENSCARG00000054187 trmt11 (ENSCARG00000054211) ENSCARG00000054317 hint3 (ENSCARG00000054332) rbms3 (ENSCARG00000054410) TGFBR2 (ENSCARG00000055298) ENSCARG00000055375 ENSCARG00000055400 ENSCARG00000055444 rab42b (ENSCARG00000055462) taf12 (ENSCARG00000055487) ctps1b (ENSCARG00000055537) ENSCARG00000055671 Cyprininae ANCESTRAL SPECIES 81 ENSGT00940000157911.ab ENSGT00940000155519.qb.a.b ENSGT01010000222294.c.a.ib.b.a ENSGT00940000157687.a.a ENSGT00940000158130.i.a ENSGT00390000017282.a.a ENSGT00940000159740.c ENSGT00730000112261.a.a ENSGT00940000164400.a ENSGT00940000156934.l.a ENSGT00530000063829.A.f ENSGT01030000234566.e.a.l ENSGT00510000048688.l ENSGT01050000244937.b ENSGT00940000156408.k ENSGT00950000183145.C.p ##22 ENSGT00390000006173.a.a ENSGT00940000156679 ENSGT00940000157815.a.a ENSGT01030000234912.a ENSGT00390000018131.a ENSGT00940000165475.c ENSGT00510000047616.b.d ENSGT00940000157131.b.b ENSGT00940000157527.a.h ENSGT00940000155488.m.b.a.a ENSGT00940000157880.g.a.d ENSGT00390000003114.e.b.b.b ENSGT00390000001296 ENSGT00390000012690.a ENSGT00940000155721.b.b.a Goldfish MODERN SPECIES 7 cmtm6 (ENSCARG00000032468) ENSCARG00000032486 sc:d156 (ENSCARG00000032526) ptpn23a (ENSCARG00000032591) SCAP (ENSCARG00000032711) ENSCARG00000032855 dek (ENSCARG00000032868) KCNV1 (ENSCARG00000032937) gbp (ENSCARG00000032946) ENSCARG00000032963 ccne2 (ENSCARG00000032990) tp53inp1 (ENSCARG00000001955) nagpa (ENSCARG00000001968) NDUFAF6 (ENSCARG00000002022) plekhf2 (ENSCARG00000002071) ENSCARG00000002082 ##22 ENSCARG00000002112 mettl6 (ENSCARG00000002134) rspo3 (ENSCARG00000002150) ENSCARG00000002172 trmt11 (ENSCARG00000002226) ENSCARG00000002298 hint3 (ENSCARG00000002304) rbms3 (ENSCARG00000002375) TGFBR2 (ENSCARG00000002642) stt3b (ENSCARG00000002725) OSBPL10 (ENSCARG00000003468) gpd1l (ENSCARG00000003478) zgc:77056 (ENSCARG00000003492) zdhhc3a (ENSCARG00000003501) ebag9 (ENSCARG00000003513) Zebrafish MODERN SPECIES 7 sc:d156 (ENSDARG00000076539) ENSDARG00000094928 ptpn23a (ENSDARG00000070124) SCAP (ENSDARG00000018096) ENSDARG00000090670 dek (ENSDARG00000070108) KCNV1 (ENSDARG00000070092) gbp (ENSDARG00000040059) ENSDARG00000102445 ccne2 (ENSDARG00000098529) tp53inp1 (ENSDARG00000028017) nagpa (ENSDARG00000075149) NDUFAF6 (ENSDARG00000053652) ENSDARG00000078204 plekhf2 (ENSDARG00000021141) ENSDARG00000075723 ##22 mettl6 (ENSDARG00000070085) rspo3 (ENSDARG00000070081) ENSDARG00000112132 ENSDARG00000114610 ENSDARG00000100910 cenpw (ENSDARG00000092136) trmt11 (ENSDARG00000040033) ENSDARG00000087388 hint3 (ENSDARG00000074286) rbms3 (ENSDARG00000044574) tgfbr2b (ENSDARG00000034541) ENSDARG00000113139 stt3b (ENSDARG00000001890) OSBPL10 (ENSDARG00000040027) gpd1l (ENSDARG00000040024) Characiphysae ANCESTRAL SPECIES 172 ENSGT00940000163253.a.a.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e ENSGT00390000002661.b.ub.a ENSGT00940000162855.a.a.a.b ENSGT00940000162855.a.b ENSGT00390000009358 ENSGT00400000024940 ENSGT00390000003774.b ENSGT00390000003774.a.a.c ENSGT00940000157616.j.a ENSGT00940000157071 ENSGT00940000159356.a.b Channel catfish DUPLICATION Channel catfish MODERN SPECIES 11 ENSIPUG00000010807 rpl3 (ENSIPUG00000010685) cacng2a (ENSIPUG00000010668) ENSIPUG00000010660 rpl23 (ENSIPUG00000010633) ccdc103 (ENSIPUG00000010622) FAM187A (ENSIPUG00000010618) abi3a (ENSIPUG00000010559) Mpp2 (ENSIPUG00000010516) pyya (ENSIPUG00000010498) hspb9 (ENSIPUG00000010493) ENSIPUG00000010454 ##22 ENSIPUG00000010432 ENSIPUG00000010403 ##22 ENSIPUG00000010383 ##22 ENSIPUG00000010370 ##22 ENSIPUG00000010236 ENSIPUG00000010217 ENSIPUG00000010206 ENSIPUG00000010190 ##22 ENSIPUG00000010176 ##22 ENSIPUG00000010162 ##22 ENSIPUG00000010132 aoc2 (ENSIPUG00000010118) slc25a39 (ENSIPUG00000010088) rpl27 (ENSIPUG00000010054) rundc1 (ENSIPUG00000010030) ENSIPUG00000009927 ifi35 (ENSIPUG00000009902) BCAT1 (ENSIPUG00000009853) hsd17b14 (ENSIPUG00000009835) Channel catfish MODERN SPECIES 16 ENSIPUG00000001625 ENSIPUG00000001649 tmem54 (ENSIPUG00000001661) hpca (ENSIPUG00000001669) nt5c1aa (ENSIPUG00000001699) stk3 (ENSIPUG00000001766) rida (ENSIPUG00000001793) rpl30 (ENSIPUG00000001810) Laptm4b (ENSIPUG00000001831) mtdh (ENSIPUG00000001853) rrm2b (ENSIPUG00000001867) AZIN1 (ENSIPUG00000001874) ENSIPUG00000001889 ints8 (ENSIPUG00000001910) CCNE2 (ENSIPUG00000001954) ENSIPUG00000001966 ##22 gdf6b (ENSIPUG00000001980) pkhd1l1.2 (ENSIPUG00000002034) nudcd1 (ENSIPUG00000002139) trhrb (ENSIPUG00000002162) TMEM74 (ENSIPUG00000002171) eif3eb (ENSIPUG00000002187) pleca (ENSIPUG00000002350) fbxl6 (ENSIPUG00000002871) ENSIPUG00000002886 SLC52A1 (ENSIPUG00000002893) rft2 (ENSIPUG00000002914) nfatc1 (ENSIPUG00000002936) atp9b (ENSIPUG00000002960) sall3b (ENSIPUG00000003006) GALR1 (ENSIPUG00000003021) Characiphysae_b ANCESTRAL SPECIES 2 ENSGT00950000183108.b.a.b ENSGT00950000182991.A.a.c.a.b ENSGT00390000014242.l ENSGT00940000161462 ENSGT00930000151038 ENSGT00390000017282 ENSGT00940000159740 ENSGT00730000112261 ENSGT00940000164400 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT01050000244937.b ENSGT00940000156408 ENSGT00950000183145.C ##22 ENSGT00390000006173 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00390000016225 ENSGT01030000235163 ENSGT00940000155619.j.a ENSGT00940000155892 ENSGT00390000018500.b.b.a ENSGT00940000156679 ENSGT00940000167456 ENSGT00940000157432.B.c ENSGT00940000169325 ENSGT00390000009631 ENSGT00650000093438 Characoidei ANCESTRAL SPECIES 172 ENSGT00950000183108.b.a.b ENSGT00950000182991.A.a.c.a.b ENSGT00390000014242.l ENSGT00940000161462 ENSGT00930000151038 ENSGT00390000017282 ENSGT00940000159740 ENSGT00730000112261 ENSGT00940000164400 ENSGT00940000156934.l ENSGT00530000063829.A ENSGT01030000234566.e.a ENSGT00510000048688 ENSGT01050000244937.b ENSGT00940000156408 ENSGT00950000183145.C ##22 ENSGT00390000006173 ENSGT00510000051337 ENSGT00940000167743 ENSGT00390000004886 ENSGT00390000016225 ENSGT00940000155619.j.a ENSGT00940000155892 ENSGT00390000018500.b.b.a ENSGT00940000156679 Red-bellied piranha MODERN SPECIES 231 pnp4b (ENSPNAG00000022141) ENSPNAG00000022162 KIAA0319 (ENSPNAG00000022182) aldh5a1 (ENSPNAG00000022230) dek (ENSPNAG00000022282) KCNV1 (ENSPNAG00000004715) gbp (ENSPNAG00000022333) ENSPNAG00000022471 ccne2 (ENSPNAG00000022486) tp53inp1 (ENSPNAG00000022509) ENSPNAG00000022523 nagpa (ENSPNAG00000022544) NDUFAF6 (ENSPNAG00000022572) ENSPNAG00000022579 plekhf2 (ENSPNAG00000022588) ENSPNAG00000022634 ##22 ENSPNAG00000022675 ENSPNAG00000022687 zgc:113232 (ENSPNAG00000022769) snrnp48 (ENSPNAG00000022828) PIK3R4 (ENSPNAG00000003747) ENSPNAG00000022984 capn7 (ENSPNAG00000023104) sh3bp5b (ENSPNAG00000023118) mettl6 (ENSPNAG00000023163) Electric eel DUPLICATION Electric eel MODERN SPECIES 2009 ENSEEEG00000000343 ##22 Electric eel MODERN SPECIES 504 nkiras1 (ENSEEEG00000022812) rpl15 (ENSEEEG00000022809) nr1d2b (ENSEEEG00000022807) thrb (ENSEEEG00000022743) RARB (ENSEEEG00000022733) top2b (ENSEEEG00000022197) ngly1 (ENSEEEG00000022154) nutf2l (ENSEEEG00000022152) adnp2b (ENSEEEG00000022149) txnl4a (ENSEEEG00000022148) ENSEEEG00000022147 ints8 (ENSEEEG00000022138) CCNE2 (ENSEEEG00000022127) ENSEEEG00000022124 ##22 Clupeiformes ANCESTRAL SPECIES 357 ENSGT00940000160798 ENSGT00940000155188.A ENSGT00940000155565.b ENSGT00940000161047 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934.k ENSGT00950000183145.C ##22 ENSGT00940000160140.a.a ENSGT00940000157594 ENSGT00390000011748.ab ENSGT00390000007776 ENSGT01100000263484.B.b.b.a.a ENSGT00530000063880.b.e Denticle herring MODERN SPECIES 12 ENSDCDG00000020098 ENSDCDG00000020091 ENSDCDG00000020082 ENSDCDG00000020073 dhrs12 (ENSDCDG00000020069) GBP2 (ENSDCDG00000020065) eif3eb (ENSDCDG00000020045) ENSDCDG00000020034 ENSDCDG00000020032 ENSDCDG00000020015 ENSDCDG00000019999 ENSDCDG00000019995 psmb10 (ENSDCDG00000019992) DPY19L4 (ENSDCDG00000019743) CCNE2 (ENSDCDG00000019633) ENSDCDG00000019628 ##22 gdf6b (ENSDCDG00000019622) ENY2 (ENSDCDG00000019619) nudcd1 (ENSDCDG00000019603) trhrb (ENSDCDG00000019598) TMEM74 (ENSDCDG00000019597) ENSDCDG00000019594 lgals17 (ENSDCDG00000019584) VPS52 (ENSDCDG00000019535) rps18 (ENSDCDG00000019506) RING1 (ENSDCDG00000019489) slc39a7 (ENSDCDG00000019481) TRAPPC9 (ENSDCDG00000019463) kcnk9 (ENSDCDG00000019437) COL22A1 (ENSDCDG00000019430) FAM135B (ENSDCDG00000019383) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 16 ENSCHAG00000009681 PARP11 (ENSCHAG00000009689) METRNL (ENSCHAG00000009699) ENSCHAG00000009702 ENSCHAG00000009711 ENSCHAG00000009717 ENSCHAG00000009731 ##22 ENSCHAG00000009778 ENSCHAG00000009792 ENSCHAG00000009820 ENSCHAG00000009832 ENSCHAG00000009843 ENSCHAG00000009867 ENSCHAG00000009890 ENSCHAG00000009917 ENSCHAG00000009962 ##22 ENSCHAG00000009991 ENSCHAG00000010041 ENSCHAG00000010066 ENSCHAG00000010101 ENSCHAG00000010116 ENSCHAG00000010134 ENSCHAG00000010160 ENSCHAG00000010186 ENSCHAG00000010195 ENSCHAG00000010207 ENSCHAG00000010232 ENSCHAG00000010252 ENSCHAG00000010334 ENSCHAG00000010346 ENSCHAG00000010382 Atlantic herring MODERN SPECIES 10 ptp4a2b (ENSCHAG00000006473) ENSCHAG00000006537 ENSCHAG00000006581 ENSCHAG00000006606 ENSCHAG00000006743 col9a2 (ENSCHAG00000006760) atp5if1a (ENSCHAG00000006792) ENSCHAG00000006821 ENSCHAG00000006924 ENSCHAG00000006949 ENSCHAG00000000559 psmb10 (ENSCHAG00000000659) DPY19L4 (ENSCHAG00000001096) ints8 (ENSCHAG00000001734) CCNE2 (ENSCHAG00000002021) ENSCHAG00000002102 ##22 gdf6b (ENSCHAG00000002150) atxn1a (ENSCHAG00000002466) gmpr (ENSCHAG00000002578) thrb (ENSCHAG00000003500) RARB (ENSCHAG00000004943) top2b (ENSCHAG00000005470) ngly1 (ENSCHAG00000010610) OXSM (ENSCHAG00000010728) SEPTIN7 (ENSCHAG00000010779) eepd1 (ENSCHAG00000012590) MATCAP2 (ENSCHAG00000012641) anln (ENSCHAG00000012650) ENSCHAG00000012707 ccdc126 (ENSCHAG00000012713) tra2a (ENSCHAG00000012717) Spotted gar DUPLICATION Spotted gar MODERN SPECIES 671 ENSLOCG00000001738 ENSLOCG00000001755 ENSLOCG00000001762 lig1 (ENSLOCG00000001777) ENSLOCG00000001796 ENSLOCG00000001813 ENSLOCG00000001844 ENSLOCG00000001856 NCSTN (ENSLOCG00000001868) copa (ENSLOCG00000001891) ENSLOCG00000001928 ENSLOCG00000001944 ENSLOCG00000001960 ENSLOCG00000001976 ENSLOCG00000002030 ENSLOCG00000002044 ##22 MYADM (ENSLOCG00000018221) ENSLOCG00000002063 ENSLOCG00000002075 ENSLOCG00000002099 casq1b (ENSLOCG00000002107) ENSLOCG00000018222 PEA15 (ENSLOCG00000002124) ENSLOCG00000002131 ENSLOCG00000002147 ENSLOCG00000002167 ENSLOCG00000002194 ENSLOCG00000002211 ENSLOCG00000002218 ENSLOCG00000002234 ENSLOCG00000002245 #22 Spotted gar MODERN SPECIES 647 gdi1 (ENSLOCG00000015477) ENSLOCG00000015482 tafazzin (ENSLOCG00000015485) atp6ap1a (ENSLOCG00000015488) dnase1l1 (ENSLOCG00000015492) dnase1l1l (ENSLOCG00000015497) rpl10 (ENSLOCG00000015500) ENSLOCG00000015504 FLNA (ENSLOCG00000015505) si:ch211-150o23.2 (ENSLOCG00000015513) ENSLOCG00000017984 ENSLOCG00000015515 ##22 bgna (ENSLOCG00000015519) si:dkey-6n6.1 (ENSLOCG00000015522) tnnc1b (ENSLOCG00000015523) ENSLOCG00000015526 ##22 ENSLOCG00000015527 ENSLOCG00000015529 dedd (ENSLOCG00000015531) cfap126 (ENSLOCG00000015532) ENSLOCG00000015533 DUSP9 (ENSLOCG00000015534) ccnq (ENSLOCG00000015536) atp2b3a (ENSLOCG00000015538) HAUS7 (ENSLOCG00000015550) ENSLOCG00000015554 ENSLOCG00000015557 ENSLOCG00000015558 ENSLOCG00000015560 tktb (ENSLOCG00000015562) ENSLOCG00000015565 Spotted gar MODERN SPECIES 675 ENSLOCG00000008235 SSH3 (ENSLOCG00000008248) ANKRD13D (ENSLOCG00000008259) kdm2aa (ENSLOCG00000008268) ENSLOCG00000008279 ENSLOCG00000008291 ENSLOCG00000008300 ENSLOCG00000008311 ENSLOCG00000008320 CLCF1 (ENSLOCG00000008329) ssrp1a (ENSLOCG00000008342) ENSLOCG00000008356 ENSLOCG00000008366 LRRC24 (ENSLOCG00000008376) ENSLOCG00000008387 ENSLOCG00000008396 ##22 ENSLOCG00000008408 ENSLOCG00000008417 ENSLOCG00000008428 them6 (ENSLOCG00000008438) C8orf82 (ENSLOCG00000008450) ARHGAP39 (ENSLOCG00000008461) gfus.1 (ENSLOCG00000008481) bmb (ENSLOCG00000008496) pycr3 (ENSLOCG00000008510) EEF1D (ENSLOCG00000008527) ENSLOCG00000008541 ENSLOCG00000008578 RHPN1 (ENSLOCG00000008592) mafaa (ENSLOCG00000018124) ZC3H3 (ENSLOCG00000008621) Spotted gar MODERN SPECIES 649 brd9 (ENSLOCG00000008095) trip13 (ENSLOCG00000008122) NKD2 (ENSLOCG00000008140) ENSLOCG00000008155 lrrc14b (ENSLOCG00000008169) si:ch211-269k10.5 (ENSLOCG00000008189) uqcrb (ENSLOCG00000008199) mterf3 (ENSLOCG00000008210) ptdss1a (ENSLOCG00000008222) NHLRC1 (ENSLOCG00000018335) KIF13A (ENSLOCG00000008249) nup153 (ENSLOCG00000008267) NDUFAF6 (ENSLOCG00000008276) ENSLOCG00000018336 plekhf2 (ENSLOCG00000018337) ENSLOCG00000008287 ##22 CFAP418 (ENSLOCG00000008299) mylipb (ENSLOCG00000008309) dtnbp1a (ENSLOCG00000008322) jarid2b (ENSLOCG00000008335) zgc:136493 (ENSLOCG00000008362) pard6gb (ENSLOCG00000008371) bloc1s4 (ENSLOCG00000008379) nutf2l (ENSLOCG00000008390) adnp2b (ENSLOCG00000008400) ENSLOCG00000008411 txnl4a (ENSLOCG00000008419) ENSLOCG00000008429 SLC66A2 (ENSLOCG00000008439) KCNG2 (ENSLOCG00000008447) ctdp1 (ENSLOCG00000008457) Elephant shark DUPLICATION Elephant shark MODERN SPECIES 2071 ENSCMIG00000008901 ##22 Elephant shark MODERN SPECIES 2464 ENSCMIG00000006978 ##22 Elephant shark MODERN SPECIES 860 ENSCMIG00000003442 ##22 Vertebrata ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Hagfish DUPLICATION Hagfish DUPLICATION Hagfish MODERN SPECIES 1465 ENSEBUG00000001054 ENSEBUG00000009599 ENSEBUG00000005701 ENSEBUG00000016569 mcm4 (ENSEBUG00000004100) ENSEBUG00000001432 ENSEBUG00000015833 ENSEBUG00000006494 ENSEBUG00000009717 fkbp9 (ENSEBUG00000014180) NT5C3B (ENSEBUG00000012808) ENSEBUG00000002231 ENSEBUG00000009030 ENSEBUG00000001937 ctnna2 (ENSEBUG00000003965) ENSEBUG00000005110 ##22 ENSEBUG00000009908 ENSEBUG00000016921 zgc:136930 (ENSEBUG00000007060) ENSEBUG00000000530 ENSEBUG00000005594 ENSEBUG00000007323 ENSEBUG00000002980 ENSEBUG00000013395 ENSEBUG00000014290 ENSEBUG00000001827 ENSEBUG00000011926 ENSEBUG00000014030 Hagfish MODERN SPECIES 989 ENSEBUG00000015207 ENSEBUG00000011728 ENSEBUG00000011764 icmt (ENSEBUG00000012389) ENSEBUG00000004287 rap1gapa (ENSEBUG00000013589) ENSEBUG00000002286 eif5a2 (ENSEBUG00000015151) taf10 (ENSEBUG00000002668) ENSEBUG00000009554 ENSEBUG00000014668 ints11 (ENSEBUG00000003190) ENSEBUG00000010981 ENSEBUG00000008380 ENSEBUG00000014387 ENSEBUG00000000419 ##22 Hagfish MODERN SPECIES 311 ENSEBUG00000015415 ENSEBUG00000014963 ENSEBUG00000011776 ENSEBUG00000014902 ENSEBUG00000005982 ENSEBUG00000008445 ENSEBUG00000016866 ##22 ENSEBUG00000011453 si:cabz01085950.1 (ENSEBUG00000004331) ENSEBUG00000003052 ENSEBUG00000015305 ENSEBUG00000005113 ENSEBUG00000012940 ENSEBUG00000005369 ENSEBUG00000002013 ENSEBUG00000004650 ENSEBUG00000007294 rab21 (ENSEBUG00000002375) tbc1d17 (ENSEBUG00000012472) nfya (ENSEBUG00000015438) ENSEBUG00000011257 Lamprey DUPLICATION Lamprey MODERN SPECIES 1443 ENSPMAG00000007723 ##22 Lamprey DUPLICATION Lamprey MODERN SPECIES 2849 ENSPMAG00000003198 ##22 Lamprey MODERN SPECIES 881 ENSPMAG00000010353 ENSPMAG00000007227 ENSPMAG00000007232 ENSPMAG00000007238 ENSPMAG00000007249 ##22 ENSPMAG00000007251 Lamprey MODERN SPECIES 5928 ENSPMAG00000008100 ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Euteleostomi ANCESTRAL SPECIES 754 ENSGT00950000183145.D ##22 ENSGT01090000260061.c.a.c.a ENSGT00940000155882.a.a ENSGT00940000162625 Sarcopterygii ANCESTRAL SPECIES 676 ENSGT00950000183145.D ##22 ENSGT01090000260061.c.a.c.a ENSGT00940000155882.a.a ENSGT00940000162625 Coelacanth MODERN SPECIES 342 ENSLACG00000000202 ENSLACG00000001707 ENSLACG00000004521 ##22 YWHAG (ENSLACG00000005482) HSPB1 (ENSLACG00000007283) SRRM3 (ENSLACG00000008008) orai2 (ENSLACG00000011817) ENSLACG00000012004 ENSLACG00000012251 ENSLACG00000012518 ABHD11 (ENSLACG00000013733) ENSLACG00000013897 ENSLACG00000014293 MTMR4 (ENSLACG00000014570) hpda (ENSLACG00000015263) HSF5 (ENSLACG00000015426) RNF43 (ENSLACG00000016277) SUPT4H1 (ENSLACG00000016364) Tetrapoda ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Amniota ANCESTRAL SPECIES 10 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Mammalia ANCESTRAL SPECIES 14 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000165188 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.A.b.a ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00940000163882 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 ENSGT00940000162535 Platypus MODERN SPECIES 7 CDC73 (ENSOANG00000002964) B3GALT2 (ENSOANG00000002965) ENSOANG00000011956 KCNT2 (ENSOANG00000049291) ENSOANG00000001407 ENSOANG00000007875 ENSOANG00000049896 ENSOANG00000044965 ENSOANG00000007864 ENSOANG00000031768 #19 PLEKHA1 (ENSOANG00000007865) #20 HTRA1 (ENSOANG00000045001) #21 ENSOANG00000002000 #22 ENSOANG00000049858 ##22 ENSOANG00000045064 #22 ENSOANG00000020984 ##22 ENSOANG00000047128 #26 CUZD1 (ENSOANG00000001997) #29 ENSOANG00000043341 #31 PSTK (ENSOANG00000001995) #32 IKZF5 (ENSOANG00000001994) #33 ACADSB (ENSOANG00000013324) #34 HMX3 (ENSOANG00000037629) #35 HMX2 (ENSOANG00000036447) #36 BUB3 (ENSOANG00000041516) #37 CPXM2 (ENSOANG00000038396) ENSOANG00000030444 #18 ENSOANG00000002087 #17 ATE1 (ENSOANG00000047065) #15 FGFR2 (ENSOANG00000029096) #14 WDR11 (ENSOANG00000002737) #13 Theria ANCESTRAL SPECIES 26 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00630000089895 Eutheria ANCESTRAL SPECIES 13 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00940000164044 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Boreoeutheria ANCESTRAL SPECIES 16 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.C ##22 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 Laurasiatheria ANCESTRAL SPECIES 14 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005 #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 Laurasiatheria_a ANCESTRAL SPECIES 15 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.a #27 ENSGT00940000162108.sb.b #28 ENSGT00940000165716 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00940000163005.a #30 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Carnivora ANCESTRAL SPECIES 16 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb #31 ENSGT00940000163005.a #30 ENSGT00390000017384.ib #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 Caniformia ANCESTRAL SPECIES 13 ENSGT00940000160482 #7 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT01010000224541 #25 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb #31 ENSGT00940000163005.a #30 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Canidae ANCESTRAL SPECIES 16 ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000163657 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108.tb #26 ENSGT00940000162108.sb.b #28 ENSGT00940000154525.b.a #29 ENSGT00940000163005.b #30 ENSGT00390000017384.hb.f #31 ENSGT00390000017384.hb.e #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Red fox MODERN SPECIES INPP5F (ENSVVUG00000011092) #9 MCMBP (ENSVVUG00000011144) #10 SEC23IP (ENSVVUG00000011215) #11 ENSVVUG00000011255 PLPP4 (ENSVVUG00000011275) #12 ENSVVUG00000011295 WDR11 (ENSVVUG00000011299) #13 FGFR2 (ENSVVUG00000011385) #14 ATE1 (ENSVVUG00000011469) #15 ENSVVUG00000011488 #16 NSMCE4A (ENSVVUG00000011499) #17 TACC2 (ENSVVUG00000011536) #18 BTBD16 (ENSVVUG00000011562) #19 PLEKHA1 (ENSVVUG00000011580) #20 HTRA1 (ENSVVUG00000011603) #21 ENSVVUG00000011630 ##22 ENSVVUG00000011639 #22 ENSVVUG00000011643 #22 Artiodactyla ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Pecora ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Yarkand deer MODERN SPECIES 6 SEC23IP (ENSCHYG00000008365) #11 PLPP4 (ENSCHYG00000008482) #12 ENSCHYG00000008531 WDR11 (ENSCHYG00000008551) #13 FGFR2 (ENSCHYG00000008730) #14 ATE1 (ENSCHYG00000010156) #15 ENSCHYG00000010624 #16 NSMCE4A (ENSCHYG00000010654) #17 TACC2 (ENSCHYG00000010835) #18 BTBD16 (ENSCHYG00000011865) #19 PLEKHA1 (ENSCHYG00000012229) #20 HTRA1 (ENSCHYG00000012466) #21 ENSCHYG00000012574 #22 ENSCHYG00000012694 #26 C10orf120 (ENSCHYG00000012768) #24 ENSCHYG00000012814 ##22 ENSCHYG00000012970 #30 ENSCHYG00000013013 #31 ENSCHYG00000013157 #31 ENSCHYG00000013211 #30 IKZF5 (ENSCHYG00000013253) #33 ACADSB (ENSCHYG00000013318) #34 HMX3 (ENSCHYG00000013451) #35 HMX2 (ENSCHYG00000013483) #36 BUB3 (ENSCHYG00000013530) #37 GPR26 (ENSCHYG00000013748) CPXM2 (ENSCHYG00000013812) CHST15 (ENSCHYG00000014028) OAT (ENSCHYG00000014322) ENSCHYG00000014425 LHPP (ENSCHYG00000014469) Percora_a ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Bovidae ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Caprinae ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Rambouillet Sheep MODERN SPECIES 14 MCMBP (ENSOARG00020017074) #10 SEC23IP (ENSOARG00020017426) #11 ENSOARG00020018045 ENSOARG00020018072 PLPP4 (ENSOARG00020018154) #12 WDR11 (ENSOARG00020018347) #13 ENSOARG00020018691 FGFR2 (ENSOARG00020018761) #14 ENSOARG00020019110 ATE1 (ENSOARG00020019169) #15 NSMCE4A (ENSOARG00020019481) #17 BTBD16 (ENSOARG00020021862) #19 PLEKHA1 (ENSOARG00020021950) #20 HTRA1 (ENSOARG00020022118) #21 ENSOARG00020022216 #22 ENSOARG00020022252 ##22 ENSOARG00020022296 #23 ENSOARG00020022322 #23 ENSOARG00020022345 #23 C10orf120 (ENSOARG00020022395) #24 ENSOARG00020022445 #26 ENSOARG00020022472 #27 ENSOARG00020022490 #30 ENSOARG00020022507 ENSOARG00020022531 #31 ENSOARG00020022621 #30 ENSOARG00020022651 #31 PSTK (ENSOARG00020022690) #32 IKZF5 (ENSOARG00020022735) #33 ACADSB (ENSOARG00020022775) #34 HMX3 (ENSOARG00020022802) #35 Marsupialia ANCESTRAL SPECIES ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00940000157351.j ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00940000165188 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182946.d.a ENSGT00950000182946.c.a.b ENSGT00950000182946.c.a.a ENSGT00940000156169 Opossum MODERN SPECIES WDR11 (ENSMODG00000008627) #13 FGFR2 (ENSMODG00000008525) #14 ENSMODG00000008447 ENSMODG00000036472 ENSMODG00000044877 ATE1 (ENSMODG00000008434) #15 ENSMODG00000008405 ENSMODG00000008327 #18 ENSMODG00000038482 #18 BTBD16 (ENSMODG00000008285) #19 PLEKHA1 (ENSMODG00000008263) #20 HTRA1 (ENSMODG00000008235) #21 ENSMODG00000008170 #22 ENSMODG00000007900 #24 ENSMODG00000007895 #22 ENSMODG00000040843 ##22 CUZD1 (ENSMODG00000007863) #29 C10orf88 (ENSMODG00000007814) #31 PSTK (ENSMODG00000007808) #32 IKZF5 (ENSMODG00000038834) #33 ACADSB (ENSMODG00000007778) #34 HMX3 (ENSMODG00000007552) #35 HMX2 (ENSMODG00000007548) #36 ENSMODG00000007542 #37 GPR26 (ENSMODG00000007533) CPXM2 (ENSMODG00000007502) CHST15 (ENSMODG00000007407) ENSMODG00000038857 ENSMODG00000024882 ENSMODG00000007358 ENSMODG00000045416 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000158288 #12 ENSGT00940000157351.j ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182946.d.a ENSGT00950000182946.c.a.b ENSGT00950000182946.c.a.a ENSGT00940000156169 Diprotodontia ANCESTRAL SPECIES 6 ENSGT00940000158288 #12 ENSGT00940000157351.j ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182946.d.a ENSGT00950000182946.c.a.b ENSGT00950000182946.c.a.a ENSGT00940000156169 Diprotodontia_a ANCESTRAL SPECIES 7 ENSGT00940000158288 #12 ENSGT00940000157351.j ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000016534.B #16 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.E #22 ENSGT00390000012112 #23 ENSGT00390000005511 #24 ENSGT00940000162108 #26 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a.f #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182946.d.b ENSGT00950000182946.d.a ENSGT00950000182946.c.a.b ENSGT00950000182946.c.a.a Common wonbat MODERN SPECIES 1067 SEC23IP (ENSVURG00010017493) #11 PLPP4 (ENSVURG00010017515) #12 ENSVURG00010017529 WDR11 (ENSVURG00010017552) #13 FGFR2 (ENSVURG00010017618) #14 ATE1 (ENSVURG00010017712) #15 ENSVURG00010017748 #17 ENSVURG00010017780 #18 BTBD16 (ENSVURG00010018157) #19 ENSVURG00010018198 PLEKHA1 (ENSVURG00010018214) #20 HTRA1 (ENSVURG00010018270) #21 ENSVURG00010018555 #22 ENSVURG00010018628 #26 ENSVURG00010018656 ENSVURG00010018659 ##22 CUZD1 (ENSVURG00010018665) #29 C10orf88 (ENSVURG00010018674) #31 ENSVURG00010018686 #32 IKZF5 (ENSVURG00010018688) #33 ACADSB (ENSVURG00010018698) #34 ENSVURG00010018711 GPR26 (ENSVURG00010018721) CPXM2 (ENSVURG00010018730) CHST15 (ENSVURG00010018756) ENSVURG00010018775 ENSVURG00010018780 ENSVURG00010018781 ENSVURG00010018787 SLC16A12 (ENSVURG00010018792) PANK1 (ENSVURG00010018800) koala MODERN SPECIES 150 ENSPCIG00000025829 #23 ENSPCIG00000025831 #24 ENSPCIG00000025834 #26 ENSPCIG00000032747 ##22 CUZD1 (ENSPCIG00000025837) #29 C10orf88 (ENSPCIG00000025838) #31 PSTK (ENSPCIG00000025839) #32 IKZF5 (ENSPCIG00000025840) #33 ENSPCIG00000025841 #34 HMX3 (ENSPCIG00000025842) #35 HMX2 (ENSPCIG00000025843) #36 ENSPCIG00000025845 #37 ENSPCIG00000026830 GPR26 (ENSPCIG00000026831) CPXM2 (ENSPCIG00000026833) ENSPCIG00000028203 CHST15 (ENSPCIG00000014522) ENSPCIG00000009126 ENSPCIG00000009123 Tasmanian devil MODERN SPECIES 1 PLPP4 (ENSSHAG00000022918) #12 ENSSHAG00000013721 WDR11 (ENSSHAG00000012828) #13 FGFR2 (ENSSHAG00000006217) #14 ATE1 (ENSSHAG00000028389) #15 ENSSHAG00000013127 #16 ENSSHAG00000012962 #17 ENSSHAG00000009993 #18 ENSSHAG00000011665 #18 BTBD16 (ENSSHAG00000010960) #19 PLEKHA1 (ENSSHAG00000024626) #20 HTRA1 (ENSSHAG00000009284) #21 ENSSHAG00000007803 #22 ENSSHAG00000007217 #24 ENSSHAG00000022182 #26 ENSSHAG00000023839 ##22 ENSSHAG00000028811 #29 ENSSHAG00000011736 #29 C10orf88 (ENSSHAG00000024427) #31 ENSSHAG00000030670 #32 IKZF5 (ENSSHAG00000011508) #33 ACADSB (ENSSHAG00000000928) #34 HMX3 (ENSSHAG00000031226) #35 HMX2 (ENSSHAG00000029091) #36 BUB3 (ENSSHAG00000010372) #37 GPR26 (ENSSHAG00000030669) CPXM2 (ENSSHAG00000023947) ENSSHAG00000009520 ENSSHAG00000001370 ENSSHAG00000002618 ENSSHAG00000021228 Sauria ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Archosauria ANCESTRAL SPECIES 7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000161718 #19 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Aves ANCESTRAL SPECIES 6 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##22 ENSGT00940000164475.a.b.b.a ENSGT00940000154525.b.a #29 ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Neognathae ANCESTRAL SPECIES 7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00960000190376 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 Galloanserae ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Phasianidae ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Phasianidae_b ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Turkey MODERN SPECIES 13 ENSMGAG00000020918 ENSMGAG00000002131 ABHD11 (ENSMGAG00000002220) ENSMGAG00000001992 ENSMGAG00000001986 ENSMGAG00000001086 ENSMGAG00000001084 ENSMGAG00000019517 ENSMGAG00000018092 ENSMGAG00000001111 ENSMGAG00000020302 ENSMGAG00000001134 ENSMGAG00000001160 TBL2 (ENSMGAG00000001178) ENSMGAG00000001187 ENSMGAG00000001704 ##22 ENSMGAG00000001697 ENSMGAG00000019801 ENSMGAG00000001120 ENSMGAG00000001728 FKBP6 (ENSMGAG00000016672) TRIM50 (ENSMGAG00000001234) ENSMGAG00000001664 ENSMGAG00000001654 ENSMGAG00000001707 ENSMGAG00000001867 ENSMGAG00000001793 ENSMGAG00000001784 ENSMGAG00000001768 ENSMGAG00000001746 ENSMGAG00000001909 Neognathae_b ANCESTRAL SPECIES 8 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000163882.e.a ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Neognathae_c ANCESTRAL SPECIES 22 ENSGT00390000015063 ENSGT00530000063743.b ENSGT00390000013187 ENSGT00940000159751 ENSGT00940000163742 ENSGT00950000183191.a.b ENSGT00390000005003 ENSGT00390000015354.c.b.b ENSGT00390000006344 ENSGT00940000154248.b ENSGT00550000074975 ENSGT00940000160149 ENSGT00940000153392.b.b.a ENSGT00940000153392.b.b.b ENSGT00940000157641 ENSGT00950000183145.D ##22 ENSGT01090000260061.c.a.c.a ENSGT00940000155882.a.a ENSGT01030000235453 ENSGT00940000162625 ENSGT00390000016686 ENSGT00940000164883 ENSGT00390000007848.a ENSGT00940000156847 ENSGT00390000000699 ENSGT00940000156438 ENSGT00940000159596 ENSGT00940000154849.a ENSGT00940000160764 ENSGT00940000155206 ENSGT00390000016209 Kakapo MODERN SPECIES 58 COL26A1 (ENSSHBG00005012425) ENSSHBG00005012468 ENSSHBG00005012710 CUX1 (ENSSHBG00005012729) ENSSHBG00005012775 SH2B2 (ENSSHBG00005012803) PRKRIP1 (ENSSHBG00005012822) ORAI2 (ENSSHBG00005012839) ALKBH4 (ENSSHBG00005012852) LRWD1 (ENSSHBG00005012877) ENSSHBG00005012895 ENSSHBG00005012906 UPK3B (ENSSHBG00005012933) DTX2 (ENSSHBG00005012960) ENSSHBG00005012984 ##22 ENSSHBG00005012997 ##22 YWHAG (ENSSHBG00005013017) HSPB1 (ENSSHBG00005013023) ENSSHBG00005013030 SRRM3 (ENSSHBG00005013038) MDH2 (ENSSHBG00005000746) ENSSHBG00005000755 TMEM120A (ENSSHBG00005000765) POR (ENSSHBG00005005716) RHBDD2 (ENSSHBG00005005771) TAF15 (ENSSHBG00005005797) MMP28 (ENSSHBG00005005940) ENSSHBG00005005958 RASL10B (ENSSHBG00005006000) AP2B1 (ENSSHBG00005006021) PEX12 (ENSSHBG00005006156) Golden eagle MODERN SPECIES 1 IFT22 (ENSACCG00020010732) COL26A1 (ENSACCG00020010750) ENSACCG00020004009 ENSACCG00020004054 ENSACCG00020004067 SH2B2 (ENSACCG00020004080) PRKRIP1 (ENSACCG00020004090) ORAI2 (ENSACCG00020004101) ALKBH4 (ENSACCG00020004109) LRWD1 (ENSACCG00020004124) ENSACCG00020004132 ENSACCG00020004143 ENSACCG00020004162 UPK3B (ENSACCG00020004189) DTX2 (ENSACCG00020004215) ENSACCG00020004237 ##22 YWHAG (ENSACCG00020004244) ENSACCG00020004250 HSPB1 (ENSACCG00020004255) ENSACCG00020004262 ENSACCG00020004279 MDH2 (ENSACCG00020004291) ENSACCG00020004308 TMEM120A (ENSACCG00020004328) POR (ENSACCG00020004354) ENSACCG00020004375 RHBDD2 (ENSACCG00020004381) TAF15 (ENSACCG00020004390) MMP28 (ENSACCG00020004423) ENSACCG00020004447 RASL10B (ENSACCG00020004455) Passeriformes ANCESTRAL SPECIES 10 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 Passeriformes_d ANCESTRAL SPECIES 7 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00940000163882.e.b ENSGT00950000183145.D ##22 ENSGT00950000183145.E #22 ENSGT01030000235500 ENSGT00950000183145.C ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00940000163882.e.a ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a Flycatcher MODERN SPECIES 9 IFT22 (ENSFALG00000028680) COL26A1 (ENSFALG00000009371) ENSFALG00000009375 ENSFALG00000009380 CUX1 (ENSFALG00000009409) SH2B2 (ENSFALG00000009471) PRKRIP1 (ENSFALG00000026614) ORAI2 (ENSFALG00000025629) ALKBH4 (ENSFALG00000028280) LRWD1 (ENSFALG00000009512) ENSFALG00000009523 ENSFALG00000009533 ENSFALG00000009540 ENSFALG00000027894 DTX2 (ENSFALG00000009561) ENSFALG00000009575 ##22 ENSFALG00000028705 #22 YWHAG (ENSFALG00000026928) HSPB1 (ENSFALG00000009587) ENSFALG00000026877 SRRM3 (ENSFALG00000009603) MDH2 (ENSFALG00000009620) TMEM120A (ENSFALG00000009669) POR (ENSFALG00000009688) ENSFALG00000009693 ENSFALG00000009696 MMP28 (ENSFALG00000009701) ENSFALG00000027238 RASL10B (ENSFALG00000027159) AP2B1 (ENSFALG00000009715) PEX12 (ENSFALG00000009719) Passeriformes_g ANCESTRAL SPECIES 8 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00940000154525.b.a #29 ENSGT00940000163882.f ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182865.b.b.b.c.b ENSGT00630000089895 Passeroidea ANCESTRAL SPECIES 7 ENSGT00940000161426 ENSGT00940000160482 #7 ENSGT00940000154962.B ENSGT00940000159204 #8 ENSGT00940000155996 #9 ENSGT00390000017265 #10 ENSGT00940000156602 #11 ENSGT00940000158288 #12 ENSGT00390000004068 #13 ENSGT00940000155447 #14 ENSGT00500000044926 #15 ENSGT00390000011476 #17 ENSGT00940000157052 #18 ENSGT00940000155157 #20 ENSGT00940000156955 #21 ENSGT00950000183145.D ##22 ENSGT00940000163882.e.a ENSGT00390000017384 #31 ENSGT00940000166847 ENSGT00390000017554 #32 ENSGT00940000155035 #33 ENSGT00940000156525 #34 ENSGT00940000158286 #35 ENSGT00940000160392 #36 ENSGT00950000183091.A.a #37 ENSGT00950000183001.a.a ENSGT00940000156414 ENSGT00390000004719 ENSGT00950000182865.b.b.b.c.b ENSGT00630000089895 ENSGT00940000159002 Zebra finch MODERN SPECIES 28 GRK5 (ENSTGUG00000011126) RGS10 (ENSTGUG00000023661) ENSTGUG00000011148 BAG3 (ENSTGUG00000011164) #8 INPP5F (ENSTGUG00000011167) #9 MCMBP (ENSTGUG00000011183) #10 SEC23IP (ENSTGUG00000011192) #11 PLPP4 (ENSTGUG00000011201) #12 WDR11 (ENSTGUG00000011203) #13 FGFR2 (ENSTGUG00000011228) #14 ATE1 (ENSTGUG00000011274) #15 NSMCE4A (ENSTGUG00000011287) #17 TACC2 (ENSTGUG00000011300) #18 PLEKHA1 (ENSTGUG00000011311) #20 HTRA1 (ENSTGUG00000011319) #21 ENSTGUG00000011310 ##22 ENSTGUG00000019976 ENSTGUG00000018513 #31 ENSTGUG00000011344 PSTK (ENSTGUG00000011358) #32 IKZF5 (ENSTGUG00000023212) #33 ACADSB (ENSTGUG00000011363) #34 HMX3 (ENSTGUG00000011379) #35 HMX2 (ENSTGUG00000011380) #36 BUB3 (ENSTGUG00000011382) #37 GPR26 (ENSTGUG00000019570) CPXM2 (ENSTGUG00000011397) CHST15 (ENSTGUG00000011423) ENSTGUG00000011432 OAT (ENSTGUG00000011436) ENSTGUG00000022969 Medium ground finch MODERN SPECIES 90 IFT22 (ENSGFOG00000013899) COL26A1 (ENSGFOG00000013903) ENSGFOG00000013915 ENSGFOG00000000405 CUX1 (ENSGFOG00000000418) ENSGFOG00000000438 SH2B2 (ENSGFOG00000000451) PRKRIP1 (ENSGFOG00000000469) ORAI2 (ENSGFOG00000000479) ALKBH4 (ENSGFOG00000000485) LRWD1 (ENSGFOG00000000491) ENSGFOG00000000503 ENSGFOG00000000512 ENSGFOG00000000529 DTX2 (ENSGFOG00000000543) ENSGFOG00000000570 ##22 YWHAG (ENSGFOG00000000583) HSPB1 (ENSGFOG00000000587) ENSGFOG00000000595 SRRM3 (ENSGFOG00000000606) MDH2 (ENSGFOG00000000621) ENSGFOG00000000640 TMEM120A (ENSGFOG00000000663) POR (ENSGFOG00000000818) ENSGFOG00000000852 TAF15 (ENSGFOG00000000872) ENSGFOG00000000894 MMP28 (ENSGFOG00000000904) ENSGFOG00000000917 RASL10B (ENSGFOG00000000933) AP2B1 (ENSGFOG00000000948) Lepidosauria ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Episquamata ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Laterata ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Common wall lizard MODERN SPECIES 6 RABEP1 (ENSPMRG00000016237) NUP88 (ENSPMRG00000016474) ENSPMRG00000016830 MIS12 (ENSPMRG00000016833) DERL2 (ENSPMRG00000016840) DHX33 (ENSPMRG00000016862) C1QBP (ENSPMRG00000016881) CAMKK1 (ENSPMRG00000016892) P2RX1 (ENSPMRG00000016916) ATP2A3 (ENSPMRG00000017017) ENSPMRG00000017620 ENSPMRG00000017629 UPK3B (ENSPMRG00000017647) DTX2 (ENSPMRG00000017658) ENSPMRG00000017665 ENSPMRG00000017670 ##22 YWHAG (ENSPMRG00000017676) ENSPMRG00000017686 HSPB1 (ENSPMRG00000017688) ENSPMRG00000017723 ENSPMRG00000017732 ENSPMRG00000017737 MDH2 (ENSPMRG00000017750) STYXL1 (ENSPMRG00000017774) TMEM120A (ENSPMRG00000017797) POR (ENSPMRG00000017929) RHBDD2 (ENSPMRG00000018356) PEX12 (ENSPMRG00000018371) AP2B1 (ENSPMRG00000018527) RASL10B (ENSPMRG00000018960) ENSPMRG00000018970 Toxicofera ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Elapidae ANCESTRAL SPECIES ENSGT00950000183145.D ##22 Indian cobra DUPLICATION Indian cobra MODERN SPECIES ENSNNAG00000002161 ENSNNAG00000002167 ENSNNAG00000002170 ENSNNAG00000002178 ENSNNAG00000002180 ENSNNAG00000002189 ENSNNAG00000002198 BAAT (ENSNNAG00000002206) ENSNNAG00000002209 ZP1 (ENSNNAG00000002223) ENSNNAG00000002234 ENSNNAG00000002312 TMEM109 (ENSNNAG00000002317) TMEM132A (ENSNNAG00000002324) SLC15A3 (ENSNNAG00000002332) ENSNNAG00000002346 ##22 ENSNNAG00000002362 ENSNNAG00000002381 ENSNNAG00000002423 ENSNNAG00000002446 ENSNNAG00000002458 ENSNNAG00000000291 DDB1 (ENSNNAG00000000380) TKFC (ENSNNAG00000000422) CYB561A3 (ENSNNAG00000000440) TMEM138 (ENSNNAG00000000451) TMEM216 (ENSNNAG00000000466) ENSNNAG00000000478 CPSF7 (ENSNNAG00000000495) SDHAF2 (ENSNNAG00000000510) PPP1R32 (ENSNNAG00000000524) Indian cobra MODERN SPECIES IFT22 (ENSNNAG00000007132) RABEP1 (ENSNNAG00000007180) NUP88 (ENSNNAG00000008142) RPAIN (ENSNNAG00000008684) MIS12 (ENSNNAG00000008724) DERL2 (ENSNNAG00000008736) DHX33 (ENSNNAG00000008768) C1QBP (ENSNNAG00000008867) CAMKK1 (ENSNNAG00000008900) P2RX1 (ENSNNAG00000009018) ATP2A3 (ENSNNAG00000009196) ZZEF1 (ENSNNAG00000011285) ENSNNAG00000013484 DTX2 (ENSNNAG00000013501) ENSNNAG00000013536 ENSNNAG00000013557 ##22 ENSNNAG00000013575 YWHAG (ENSNNAG00000013591) HSPB1 (ENSNNAG00000013601) MDH2 (ENSNNAG00000013654) ENSNNAG00000013666 TMEM120A (ENSNNAG00000013725) POR (ENSNNAG00000013759) ENSNNAG00000013799 ENSNNAG00000013812 TAF15 (ENSNNAG00000013821) ENSNNAG00000013856 ENSNNAG00000013864 RASL10B (ENSNNAG00000013950) AP2B1 (ENSNNAG00000013966) PEX12 (ENSNNAG00000014026) Actinopterygii ANCESTRAL SPECIES 100 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D ##22 ENSGT01090000260061.c.a.c.a ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000154757 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT00940000154890.a ENSGT01020000230351.C ENSGT00940000155668 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 Reedfish MODERN SPECIES 16 ggnbp2 (ENSECRG00000014003) pigw (ENSECRG00000014034) MYO19 (ENSECRG00000014070) znhit3 (ENSECRG00000014189) ca4a (ENSECRG00000014210) mpx (ENSECRG00000014456) GUSB (ENSECRG00000016834) vkorc1l1 (ENSECRG00000016871) nupr1a (ENSECRG00000016890) MTMR4 (ENSECRG00000016928) hpda (ENSECRG00000017044) ENSECRG00000017205 ENSECRG00000017279 supt4h1 (ENSECRG00000017339) ENSECRG00000017409 ENSECRG00000017611 ##22 ywhag1 (ENSECRG00000018164) hspb1 (ENSECRG00000018180) SRRM3 (ENSECRG00000018204) mpx (ENSECRG00000018252) ENSECRG00000018301 ENSECRG00000018330 ENSECRG00000018364 ENSECRG00000018382 ENSECRG00000018405 ENSECRG00000018445 rpain (ENSECRG00000018481) c1qbp (ENSECRG00000018496) dhx33 (ENSECRG00000018515) camkk1a (ENSECRG00000018554) p2rx1 (ENSECRG00000018633) Neopterygii ANCESTRAL SPECIES 98 ENSGT00940000159426 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160149 ENSGT00940000153392.b.b ENSGT00940000157641 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00940000158976 ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D ##22 ENSGT01090000260061.c.a.c.a ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000163443 ENSGT00940000154757 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT00940000154890.a ENSGT01020000230351.C ENSGT00940000155668 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 952 ENSGT00950000183145.D.h.a ##22 ENSGT01090000260061.c.a.c.a.a.a Clupeocephala ANCESTRAL SPECIES ENSGT00950000183145.D.h.a ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183145.D.h.a ##22 Protacanthopterygii ANCESTRAL SPECIES 105 ENSGT00390000006633.a ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044.o ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.h.a ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Salmoninae ANCESTRAL SPECIES 277 ENSGT00950000183145.D.h.a ##22 ENSGT01090000260061.c.a.c.a.a.b.b ENSGT00980000199127.b ENSGT00940000155882.a.a.d ENSGT00940000162625 ENSGT00940000159210.l ENSGT01010000224314 ENSGT00390000018406.a ENSGT00940000156747.l ENSGT01020000230351.C.f ENSGT00940000154890.a.a.d ENSGT00940000155668.j.c.b ENSGT00940000155045 ENSGT00940000156179.d ENSGT00940000155228.e ENSGT00940000154735.c.e Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00940000161111.a ENSGT00390000006633.a.r ENSGT00390000009552.i ENSGT00940000157044.p ENSGT00390000001752.r ENSGT00940000155690.b.a.f ENSGT00940000158976.h.b ENSGT00940000154006.b.e ENSGT00390000018559.g ENSGT00950000183203.d.d.l.a ENSGT00950000183145.D.h.a ##22 ENSGT01090000260061.c.a.c.a.a.b.b ENSGT00980000199127.b ENSGT00940000155882.a.a.d ENSGT00940000162625.c ENSGT00940000159210.l ENSGT01010000224314 ENSGT00390000018406.a ENSGT00940000156747.l ENSGT01020000230351.C.f ENSGT00940000154890.a.a.d ENSGT00940000155668.j.c.b ENSGT00940000155045 ENSGT00990000212862 ENSGT00940000156179.d ENSGT00940000155228.e Salmo ANCESTRAL SPECIES 44 ENSGT00940000161111.a ENSGT00390000006633.a.r ENSGT00390000009552.i ENSGT00940000157044.p ENSGT00390000001752.r ENSGT00940000155690.b.a.f ENSGT00940000158976.h.b ENSGT00940000154006.b.e ENSGT00510000048674.i ENSGT00390000018559.g ENSGT00950000183203.d.d.l.a ENSGT00950000183145.D.h.a ##22 ENSGT01090000260061.c.a.c.a.a.b.b ENSGT00940000155882.a.a.d ENSGT00940000162625.c ENSGT00940000159210.l ENSGT01010000224314 ENSGT00390000018406.a ENSGT01020000230351.C.f ENSGT00940000154890.a.a.d ENSGT00940000155668.j.c.b ENSGT00940000155045 ENSGT00990000212862 ENSGT00940000156179.d ENSGT00940000155228.e ENSGT00940000154735.c.e ENSGT01100000263892.b.a Atlantic salmon MODERN SPECIES 4 ENSSSAG00000093906 ENSSSAG00000100062 ENSSSAG00000064552 ENSSSAG00000108420 ENSSSAG00000084076 sp30l (ENSSSAG00000069942) ENSSSAG00000069957 ENSSSAG00000096234 ENSSSAG00000108195 ENSSSAG00000070051 ENSSSAG00000111810 ENSSSAG00000070458 ENSSSAG00000073513 supt4h1 (ENSSSAG00000073514) ENSSSAG00000073527 ENSSSAG00000119650 ##22 143g1 (ENSSSAG00000038870) hspb1 (ENSSSAG00000101076) srrm3 (ENSSSAG00000039179) ENSSSAG00000086270 ENSSSAG00000039257 ENSSSAG00000039636 c1qbp (ENSSSAG00000039711) ENSSSAG00000115502 p2rx1 (ENSSSAG00000039817) camkk1a (ENSSSAG00000040052) ATP2A3 (ENSSSAG00000040294) ZZEF1 (ENSSSAG00000041149) ENSSSAG00000042927 ENSSSAG00000086033 ankfy1 (ENSSSAG00000042993) River trout MODERN SPECIES 6 ENSSTUG00000012462 ENSSTUG00000012478 ENSSTUG00000012569 ENSSTUG00000012586 HAND1 (ENSSTUG00000012604) ENSSTUG00000012613 ggnbp2 (ENSSTUG00000012629) GUSB (ENSSTUG00000012723) vkorc1l1 (ENSSTUG00000013236) ENSSTUG00000013258 MTMR4 (ENSSTUG00000013379) RNF43 (ENSSTUG00000016472) ENSSTUG00000016481 ENSSTUG00000016495 ENSSTUG00000016517 ENSSTUG00000016687 ##22 YWHAG (ENSSTUG00000016703) hspb1 (ENSSTUG00000016717) SRRM3 (ENSSTUG00000016738) ENSSTUG00000016772 ENSSTUG00000017131 c1qbp (ENSSTUG00000017143) p2rx1 (ENSSTUG00000017171) camkk1a (ENSSTUG00000017272) ATP2A3 (ENSSTUG00000017361) ENSSTUG00000017545 ZZEF1 (ENSSTUG00000017555) ENSSTUG00000017628 ankfy1 (ENSSTUG00000017652) ube2g1a (ENSSTUG00000017825) hnrnpabb (ENSSTUG00000017846) Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000161843 ENSGT00530000067117.a ENSGT00940000156198.c.a ENSGT00390000003354.e ENSGT00950000183073.a.a.b.f.a ENSGT00940000161111.a ENSGT00390000006633.a.r ENSGT00390000009552.i ENSGT00940000157044.p ENSGT00390000001752.r ENSGT00940000155690.b.a.f ENSGT00940000158976.h.b ENSGT00940000154006.b.e ENSGT01060000250101 ENSGT00950000183203.d.d.l.a ENSGT00950000183145.D.h.a ##22 ENSGT01090000260061.c.a.c.a.a.b.b ENSGT00980000199127.b ENSGT00940000155882.a.a.d ENSGT00940000162625.c ENSGT00940000159210.l ENSGT01010000224314 ENSGT00390000018406.a ENSGT00940000156747.l ENSGT01020000230351.C.f ENSGT00940000154890.a.a.d ENSGT00940000155668.j.c.b ENSGT00940000155045 ENSGT00990000212862 ENSGT00940000156179.d ENSGT00940000155228.e Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00940000161843 ENSGT00530000067117.a ENSGT00940000156198.c.a ENSGT00390000003354.e ENSGT00950000183073.a.a.b.f.a ENSGT00940000161111.a ENSGT00390000006633.a.r ENSGT00390000009552.i ENSGT00940000157044.p ENSGT00390000001752.r ENSGT00940000155690.b.a.f ENSGT00940000158976.h.b ENSGT00940000154006.b.e ENSGT01060000250101 ENSGT00950000183203.d.d.l.a ENSGT00950000183145.D.h.a ##22 ENSGT01090000260061.c.a.c.a.a.b.b ENSGT00980000199127.b ENSGT00940000155882.a.a.d ENSGT00940000162625.c ENSGT00940000159210.l ENSGT01010000224314 ENSGT00390000018406.a ENSGT00940000156747.l ENSGT01020000230351.C.f ENSGT00940000154890.a.a.d ENSGT00940000155668.j.c.b ENSGT00940000155045 ENSGT00990000212862 ENSGT00940000156179.d ENSGT00940000155228.e Coho salmon MODERN SPECIES 26 slc30a9 (ENSOKIG00005010432) RAB28 (ENSOKIG00005010411) NKX3-2 (ENSOKIG00005010403) ENSOKIG00005010392 COPS6 (ENSOKIG00005010315) HAND1 (ENSOKIG00005010299) SAP30L (ENSOKIG00005010288) GGNBP2 (ENSOKIG00005010255) vkorc1l1 (ENSOKIG00005010236) GUSB (ENSOKIG00005009847) ca4a (ENSOKIG00005009773) MTMR4 (ENSOKIG00005009483) RNF43 (ENSOKIG00005009430) ENSOKIG00005009393 ENSOKIG00005009330 ENSOKIG00005009303 ##22 YWHAG (ENSOKIG00005009289) ENSOKIG00005009271 hspb1 (ENSOKIG00005009254) SRRM3 (ENSOKIG00005009227) ENSOKIG00005009083 ENSOKIG00005009043 c1qbp (ENSOKIG00005009024) DHX33 (ENSOKIG00005008981) p2rx1 (ENSOKIG00005008860) ENSOKIG00005008821 camkk1a (ENSOKIG00005008776) ATP2A3 (ENSOKIG00005008618) ZZEF1 (ENSOKIG00005007501) ENSOKIG00005007455 ankfy1 (ENSOKIG00005007385) Chinook salmon MODERN SPECIES 33 slc30a9 (ENSOTSG00005033724) NKX3-2 (ENSOTSG00005033723) ENSOTSG00005033722 ENSOTSG00005033719 COPS6 (ENSOTSG00005033701) HAND1 (ENSOTSG00005033696) SAP30L (ENSOTSG00005033695) ggnbp2 (ENSOTSG00005033693) vkorc1l1 (ENSOTSG00005033689) GUSB (ENSOTSG00005033286) ca4a (ENSOTSG00005033283) MTMR4 (ENSOTSG00005022167) RNF43 (ENSOTSG00005022137) ENSOTSG00005022136 ENSOTSG00005022132 ENSOTSG00005022131 ##22 YWHAG (ENSOTSG00005022130) ENSOTSG00005022128 hspb1 (ENSOTSG00005022126) SRRM3 (ENSOTSG00005022122) ENSOTSG00005022074 ENSOTSG00005022066 ENSOTSG00005022064 c1qbp (ENSOTSG00005022061) dhx33 (ENSOTSG00005022058) p2rx1 (ENSOTSG00005022050) camkk1a (ENSOTSG00005022048) ATP2A3 (ENSOTSG00005021980) ENSOTSG00005021742 ankfy1 (ENSOTSG00005019906) ube2g1a (ENSOTSG00005019902) Huchen MODERN SPECIES 2413 ENSHHUG00000038382 ENSHHUG00000038376 ##22 ENSHHUG00000038375 YWHAG (ENSHHUG00000038341) ENSHHUG00000038332 hspb1 (ENSHHUG00000038322) Northern pike MODERN SPECIES 6 znhit3 (ENSELUG00000000856) nupr1a (ENSELUG00000019495) vkorc1l1 (ENSELUG00000019523) GUSB (ENSELUG00000019564) ca4a (ENSELUG00000000861) MTMR4 (ENSELUG00000019662) hpda (ENSELUG00000019714) ENSELUG00000019770 ENSELUG00000019733 ENSELUG00000019748 ENSELUG00000019791 supt4h1 (ENSELUG00000019831) ENSELUG00000019930 ENSELUG00000029372 ENSELUG00000034168 ENSELUG00000019966 ##22 YWHAG (ENSELUG00000019980) hspb1 (ENSELUG00000000880) ENSELUG00000020024 SRRM3 (ENSELUG00000030395) ENSELUG00000030474 ENSELUG00000020086 rpain (ENSELUG00000020160) c1qbp (ENSELUG00000020217) dhx33 (ENSELUG00000020257) ENSELUG00000029668 p2rx1 (ENSELUG00000020285) camkk1a (ENSELUG00000020319) ENSELUG00000026241 ENSELUG00000020396 ENSELUG00000033003 Osteoglossiformes ANCESTRAL SPECIES 27 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044.s ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.h.a ##22 ENSGT01090000260061.c.a.c.a.a.a ENSGT00940000155882.a.a.b ENSGT00940000154890.a.b ENSGT00940000155882.a.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668 ENSGT00940000155045 Asian bonytongue MODERN SPECIES 17 dhrs11a (ENSSFOG00015022856) ggnbp2 (ENSSFOG00015022866) pigw (ENSSFOG00015000054) MYO19 (ENSSFOG00015000055) znhit3 (ENSSFOG00015028576) nupr1a (ENSSFOG00015000060) vkorc1l1 (ENSSFOG00015029965) GUSB (ENSSFOG00015000080) ca4a (ENSSFOG00015000184) MTMR4 (ENSSFOG00015000323) hpda (ENSSFOG00015000487) ENSSFOG00015000547 ENSSFOG00015029855 supt4h1 (ENSSFOG00015030696) ENSSFOG00015001262 ENSSFOG00015001530 ##22 YWHAG (ENSSFOG00015005117) HSPB1 (ENSSFOG00015032567) ENSSFOG00015001582 SRRM3 (ENSSFOG00015001696) ENSSFOG00015001703 rpain (ENSSFOG00015001717) c1qbp (ENSSFOG00015025738) dhx33 (ENSSFOG00015001783) p2rx1 (ENSSFOG00015001843) camkk1a (ENSSFOG00015001875) ATP2A3 (ENSSFOG00015001908) ZZEF1 (ENSSFOG00015002015) cyb5d2 (ENSSFOG00015030114) ankfy1 (ENSSFOG00015002252) UBE2G1 (ENSSFOG00015002389) P. kingsleyae MODERN SPECIES 28 ggnbp2 (ENSPKIG00000016390) pigw (ENSPKIG00000016463) MYO19 (ENSPKIG00000016488) znhit3 (ENSPKIG00000016556) nupr1a (ENSPKIG00000016570) vkorc1l1 (ENSPKIG00000016585) GUSB (ENSPKIG00000016604) ca4a (ENSPKIG00000016649) MTMR4 (ENSPKIG00000016725) hpda (ENSPKIG00000016911) RNF43 (ENSPKIG00000016965) ENSPKIG00000016985 ENSPKIG00000016994 supt4h1 (ENSPKIG00000017008) ENSPKIG00000017060 ENSPKIG00000017182 ##22 YWHAG (ENSPKIG00000017195) hspb1 (ENSPKIG00000017205) SRRM3 (ENSPKIG00000017233) MLXIPL (ENSPKIG00000017285) rpain (ENSPKIG00000017333) c1qbp (ENSPKIG00000017376) dhx33 (ENSPKIG00000017401) p2rx1 (ENSPKIG00000017459) camkk1a (ENSPKIG00000017515) ENSPKIG00000017538 ATP2A3 (ENSPKIG00000017593) ENSPKIG00000017699 ZZEF1 (ENSPKIG00000017736) cyb5d2 (ENSPKIG00000017813) ankfy1 (ENSPKIG00000017845) Osteoglossocephalai ANCESTRAL SPECIES 870 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b Clupeocephala ANCESTRAL SPECIES 782 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b Otomorpha ANCESTRAL SPECIES 23 ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b ENSGT00940000155882.a.a ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 Otophysi ANCESTRAL SPECIES 14 ENSGT00940000157272.h ENSGT01030000234517.E.c ENSGT00940000158557.l ENSGT00390000017839 ENSGT00940000156747 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b.c ENSGT00980000199127.d ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00560000077232.B.g.b ENSGT00940000164254.b Characiphysae ANCESTRAL SPECIES 65 ENSGT01030000234517.E.c ENSGT00940000158557.l ENSGT00390000017839 ENSGT00940000156747 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b.c ENSGT00940000155882.a.a ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00560000077232.B.g.b ENSGT00940000164254.b Characiphysae_b ANCESTRAL SPECIES 43 ENSGT01030000234517.E.c ENSGT00940000158557.l ENSGT00390000017839 ENSGT00940000156747 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b.c ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00560000077232.B.g.b ENSGT00940000164254.b ENSGT00390000013800 Characoidei ANCESTRAL SPECIES 146 ENSGT00390000001752 ENSGT00940000157044 ENSGT00940000167280 ENSGT00940000156747 ENSGT00940000155690.b.a.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b.c ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00560000077232.B.g.b ENSGT00940000164254.b ENSGT00390000013800 Red-bellied piranha MODERN SPECIES 240 ENSPNAG00000009399 supt4h1 (ENSPNAG00000009422) ENSPNAG00000009526 ENSPNAG00000009574 ##22 ywhag1 (ENSPNAG00000009594) ENSPNAG00000009606 hspb1 (ENSPNAG00000004945) SRRM3 (ENSPNAG00000009621) ENSPNAG00000009635 rpain (ENSPNAG00000009665) c1qbp (ENSPNAG00000009689) znhit3 (ENSPNAG00000009703) MYO19 (ENSPNAG00000009723) pigw (ENSPNAG00000009728) ggnbp2 (ENSPNAG00000009772) dhrs11a (ENSPNAG00000009804) ENSPNAG00000009819 flot2a (ENSPNAG00000001344) ENSPNAG00000009914 Mexicana tetra MODERN SPECIES 111 CIT (ENSAMXG00000015739) RAB35 (ENSAMXG00000040604) rplp0 (ENSAMXG00000032613) GUSB (ENSAMXG00000042392) vkorc1l1 (ENSAMXG00000015856) nupr1a (ENSAMXG00000024841) dhx33 (ENSAMXG00000015875) ca4a (ENSAMXG00000043073) ENSAMXG00000024842 MTMR4 (ENSAMXG00000015899) hpda (ENSAMXG00000015913) ENSAMXG00000015935 ENSAMXG00000030920 supt4h1 (ENSAMXG00000041272) ENSAMXG00000015980 ENSAMXG00000016010 ##22 ywhag1 (ENSAMXG00000035383) hspb1 (ENSAMXG00000016037) ENSAMXG00000031070 SRRM3 (ENSAMXG00000016051) MLXIPL (ENSAMXG00000016067) rpain (ENSAMXG00000016087) c1qbp (ENSAMXG00000016100) znhit3 (ENSAMXG00000042020) MYO19 (ENSAMXG00000016118) pigw (ENSAMXG00000024844) ggnbp2 (ENSAMXG00000016123) SSR4 (ENSAMXG00000032687) dhrs11a (ENSAMXG00000030213) ENSAMXG00000016157 flot2a (ENSAMXG00000016179) Channel catfish MODERN SPECIES 20 GUSB (ENSIPUG00000011688) ca4a (ENSIPUG00000011729) ca4a (ENSIPUG00000011745) mtmr4 (ENSIPUG00000011795) hpda (ENSIPUG00000011930) rnf43 (ENSIPUG00000012016) ENSIPUG00000012036 ENSIPUG00000012053 supt4h1 (ENSIPUG00000012062) ENSIPUG00000012129 zgc:112001 (ENSIPUG00000012267) ENSIPUG00000012287 ENSIPUG00000012304 zgc:112001 (ENSIPUG00000012310) zgc:112001 (ENSIPUG00000012340) ENSIPUG00000012354 ##22 ywhag1 (ENSIPUG00000012397) hspb1 (ENSIPUG00000012429) ENSIPUG00000012445 ENSIPUG00000012451 srrm3 (ENSIPUG00000012467) ENSIPUG00000012479 rpain (ENSIPUG00000012533) c1qbp (ENSIPUG00000012598) znhit3 (ENSIPUG00000012609) myo19 (ENSIPUG00000012625) PIGW (ENSIPUG00000012660) GGNBP2 (ENSIPUG00000012675) dhrs11 (ENSIPUG00000012723) flot2a (ENSIPUG00000013356) tbx6l (ENSIPUG00000013387) Cyprinoidei ANCESTRAL SPECIES 16 ENSGT00530000063974.b ENSGT00530000063404.a.m ENSGT01030000234606.a.b.p ENSGT00390000017839 ENSGT00940000156747 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b.c ENSGT00940000155882.a.a ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00940000165297.k.a.a ENSGT00940000165297.k.a.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 25 ENSGT00940000158976.j.a ENSGT00950000183116.b.a.a.a.a.f ENSGT00940000167280.b ENSGT00940000157044.q.b ENSGT00390000001752.d ENSGT00940000155690.b.a.c ENSGT00940000158976.j.b ENSGT00530000063474.B.e.b ENSGT00940000154006.b.c.b ENSGT00390000018559.a ENSGT00950000183203.d.d.o ENSGT00940000154006.b.c.a ENSGT00510000048674 ENSGT00390000018559.b ENSGT00950000183203.d.d.p ENSGT00950000183145.D.h.b.a ##22 ENSGT01090000260061.c.a.c.a.b.c.b ENSGT00940000155882.a.a.l ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210.i ENSGT00390000006416 ENSGT00390000018406.d ENSGT00390000010822.a ENSGT00940000157382.o ENSGT00940000159210.j ENSGT00390000018406.c ENSGT00390000010822.b ENSGT00940000157382.n.b ENSGT00390000013520.e ENSGT00940000157382.n.a Cyprininae_a ANCESTRAL SPECIES 306 ENSGT00390000001752.c ENSGT00940000155690.b.a.d ENSGT00940000158976.j.a ENSGT00950000183116.b.a.a.a.a.f ENSGT00940000167280.b ENSGT00940000157044.q.b ENSGT00390000001752.d ENSGT00940000155690.b.a.c ENSGT00940000158976.j.b ENSGT00530000063474.B.e.b ENSGT00940000154006.b.c.b ENSGT00940000154006.b.d ENSGT00510000048674 ENSGT00390000018559.b ENSGT00950000183203.d.d.p ENSGT00950000183145.D.h.b.a ##22 ENSGT01090000260061.c.a.c.a.b.c.b ENSGT00940000155882.a.a.l ENSGT00940000159210.i ENSGT00390000006416 ENSGT00390000018406.d ENSGT00390000010822.a ENSGT00940000157382.o ENSGT00390000018406.c ENSGT00390000010822.b ENSGT00940000157382.n.a ENSGT00390000013520.f ENSGT00390000009552.a ENSGT00840000129887.g.b.a Common carp reference MODERN SPECIES 15 rplp0 (ENSCCRG00000080758) dhx33 (ENSCCRG00000072284) nupr1a (ENSCCRG00000062347) ENSCCRG00000005946 vkorc1l1 (ENSCCRG00000079493) ENSCCRG00000032437 ca4a (ENSCCRG00000030049) MTMR4 (ENSCCRG00000030066) ENSCCRG00000008625 hpda (ENSCCRG00000024723) ENSCCRG00000024714 ENSCCRG00000049876 supt4h1 (ENSCCRG00000049874) ENSCCRG00000049864 hspb1 (ENSCCRG00000066100) ENSCCRG00000053391 ##22 ywhag1 (ENSCCRG00000067981) ENSCCRG00000060619 ENSCCRG00000074337 ENSCCRG00000073926 rpain (ENSCCRG00000030523) c1qbp (ENSCCRG00000058149) znhit3 (ENSCCRG00000077670) MYO19 (ENSCCRG00000032677) pigw (ENSCCRG00000032662) ggnbp2 (ENSCCRG00000034598) dhrs11a (ENSCCRG00000055687) ENSCCRG00000034609 srrt (ENSCCRG00000010285) prdx4 (ENSCCRG00000067453) sat1a.2 (ENSCCRG00000021595) Golden-line barbel MODERN SPECIES 3280 ENSSGRG00000006283 ##22 Cyprininae ANCESTRAL SPECIES 1141 ENSGT00950000183145.D.h.b.b ##22 ENSGT01090000260061.c.a.c.a.b.c.a ENSGT00940000155882.a.a.k Goldfish MODERN SPECIES 44 zgc:73226 (ENSCARG00000000937) ENSCARG00000001084 TRAF2 (ENSCARG00000001854) ENSCARG00000001864 RABL6 (ENSCARG00000001866) ENSCARG00000001871 MAPKAP1 (ENSCARG00000001874) ENSCARG00000001890 mvb12ba (ENSCARG00000001907) lmx1ba (ENSCARG00000001912) zbtb43 (ENSCARG00000001917) RALGPS1 (ENSCARG00000002209) ENSCARG00000003140 ENSCARG00000003161 ENSCARG00000003164 ENSCARG00000003167 ##22 ywhag1 (ENSCARG00000003174) hspb1 (ENSCARG00000003177) SRRM3 (ENSCARG00000003184) ENSCARG00000003208 ENSCARG00000003226 c1qbp (ENSCARG00000003270) znhit3 (ENSCARG00000003273) MYO19 (ENSCARG00000003294) ggnbp2 (ENSCARG00000003392) dhrs11a (ENSCARG00000003420) ENSCARG00000003428 ENSCARG00000003444 mvb12ba (ENSCARG00000003449) ENSCARG00000003452 ENSCARG00000003454 Cyprininae_a ANCESTRAL SPECIES 701 ENSGT00950000183145.D.h.b.b ##22 ENSGT01090000260061.c.a.c.a.b.c.a ENSGT00980000199127.d ENSGT00940000155882.a.a.k ENSGT00940000162625 ENSGT00940000159210.j Golden-line barbel MODERN SPECIES 809 ENSSGRG00000041193 ##22 ywhag1 (ENSSGRG00000041195) hspb1 (ENSSGRG00000041206) ENSSGRG00000041212 ENSSGRG00000041216 srrt (ENSSGRG00000041231) ENSSGRG00000041299 ENSSGRG00000041306 dhrs11a (ENSSGRG00000041308) ggnbp2 (ENSSGRG00000041311) pigw (ENSSGRG00000041348) ENSSGRG00000041359 znhit3 (ENSSGRG00000041374) sat1a.2 (ENSSGRG00000041380) apooa (ENSSGRG00000041404) ENSSGRG00000041405 Common carp reference MODERN SPECIES 7 ENSCCRG00000018809 ENSCCRG00000054094 ENSCCRG00000066146 ENSCCRG00000068913 ENSCCRG00000066708 rplp0 (ENSCCRG00000047627) nupr1a (ENSCCRG00000059775) vkorc1l1 (ENSCCRG00000056254) ENSCCRG00000062140 ca4a (ENSCCRG00000067028) ENSCCRG00000020705 hpda (ENSCCRG00000032574) ENSCCRG00000032564 supt4h1 (ENSCCRG00000062668) ENSCCRG00000026968 ENSCCRG00000079192 ##22 ywhag1 (ENSCCRG00000055965) ENSCCRG00000035029 hspb1 (ENSCCRG00000069777) SRRM3 (ENSCCRG00000078835) ENSCCRG00000004896 c1qbp (ENSCCRG00000030531) znhit3 (ENSCCRG00000055115) pigw (ENSCCRG00000059201) ggnbp2 (ENSCCRG00000034572) dhrs11a (ENSCCRG00000034601) ENSCCRG00000035241 ENSCCRG00000035246 ENSCCRG00000035256 ENSCCRG00000057331 srrt (ENSCCRG00000034646) Clupeiformes ANCESTRAL SPECIES 215 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.b ENSGT00940000155882.a.a ENSGT00980000199127.d ENSGT00940000162625 ENSGT00950000183145.D.h.b ##22 Denticle herring MODERN SPECIES 16 ggnbp2 (ENSDCDG00000007910) pigw (ENSDCDG00000007844) MYO19 (ENSDCDG00000007794) znhit3 (ENSDCDG00000007763) nupr1a (ENSDCDG00000007759) vkorc1l1 (ENSDCDG00000007757) GUSB (ENSDCDG00000007658) GUSB (ENSDCDG00000007078) ca4a (ENSDCDG00000006968) MTMR4 (ENSDCDG00000005559) hpda (ENSDCDG00000005319) RNF43 (ENSDCDG00000005289) RSPH6A (ENSDCDG00000005287) supt4h1 (ENSDCDG00000005283) ENSDCDG00000005273 ENSDCDG00000005260 ##22 YWHAG (ENSDCDG00000005258) hspb1 (ENSDCDG00000005255) ENSDCDG00000005253 ENSDCDG00000005249 ENSDCDG00000005246 ENSDCDG00000005238 arfip2b (ENSDCDG00000005217) fhdc3 (ENSDCDG00000005195) trim3b (ENSDCDG00000004975) ENSDCDG00000004965 trim47 (ENSDCDG00000004963) frem2a (ENSDCDG00000004818) ufm1 (ENSDCDG00000004781) trpc4a (ENSDCDG00000004760) POSTN (ENSDCDG00000004746) Atlantic herring MODERN SPECIES 24 fam222ba (ENSCHAG00000014529) trpv1 (ENSCHAG00000014199) ggnbp2 (ENSCHAG00000014003) pigw (ENSCHAG00000013980) MYO19 (ENSCHAG00000013412) nupr1a (ENSCHAG00000013373) vkorc1l1 (ENSCHAG00000013357) GUSB (ENSCHAG00000013308) ca4a (ENSCHAG00000013297) MTMR4 (ENSCHAG00000007664) hpda (ENSCHAG00000007096) RNF43 (ENSCHAG00000007072) HSF5 (ENSCHAG00000007039) supt4h1 (ENSCHAG00000006986) ENSCHAG00000006898 ENSCHAG00000006811 ##22 ywhag1 (ENSCHAG00000006782) ENSCHAG00000006754 hspb1 (ENSCHAG00000006742) ENSCHAG00000006582 c1qbp (ENSCHAG00000006549) dhx33 (ENSCHAG00000006024) p2rx1 (ENSCHAG00000005574) camkk1a (ENSCHAG00000005451) ATP2A3 (ENSCHAG00000001494) ZZEF1 (ENSCHAG00000019997) ruvbl2 (ENSCHAG00000019655) SPNS2 (ENSCHAG00000019374) ABCG4 (ENSCHAG00000018688) bhlha9 (ENSCHAG00000018632) WSCD1 (ENSCHAG00000018625) Euteleosteomorpha ANCESTRAL SPECIES 617 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b Acanthomorphata ANCESTRAL SPECIES 14 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 Cod MODERN SPECIES 20 flot2a (ENSGMOG00000014172) ENSGMOG00000014132 DHRS11 (ENSGMOG00000014113) ggnbp2 (ENSGMOG00000014074) pigw (ENSGMOG00000020067) MYO19 (ENSGMOG00000014015) znhit3 (ENSGMOG00000013995) nupr1a (ENSGMOG00000020066) vkorc1l1 (ENSGMOG00000034892) ENSGMOG00000013942 ca4a (ENSGMOG00000013920) ENSGMOG00000013873 ENSGMOG00000013287 supt4h1 (ENSGMOG00000014619) ENSGMOG00000033590 ENSGMOG00000013242 ##22 ywhag1 (ENSGMOG00000026114) ENSGMOG00000009601 ENSGMOG00000026427 fam53c (ENSGMOG00000036282) ENSGMOG00000003044 zmat2 (ENSGMOG00000003032) NUP98 (ENSGMOG00000001450) ENSGMOG00000030352 ENSGMOG00000024147 ENSGMOG00000027141 ENSGMOG00000001539 ENSGMOG00000036509 ENSGMOG00000032086 ENSGMOG00000026503 ENSGMOG00000009596 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000183145.D.h.b ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000183145.D.h.b ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183145.D.h.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183145.D.h.b ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00950000183145.D.h.b ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000183145.D.h.b ##22 Aplocheiloidei ANCESTRAL SPECIES ENSGT00950000183145.D.h.b ##22 Mangrove rivulus MODERN SPECIES 22 dhrs11a (ENSKMAG00000012612) ggnbp2 (ENSKMAG00000012643) pigw (ENSKMAG00000012688) MYO19 (ENSKMAG00000012705) znhit3 (ENSKMAG00000012759) nupr1a (ENSKMAG00000012775) vkorc1l1 (ENSKMAG00000012786) GUSB (ENSKMAG00000012823) ENSKMAG00000012887 ca4a (ENSKMAG00000012903) MTMR4 (ENSKMAG00000012965) hpda (ENSKMAG00000013060) ENSKMAG00000013104 supt4h1 (ENSKMAG00000013119) ENSKMAG00000013190 ENSKMAG00000013416 ##22 YWHAG (ENSKMAG00000013441) hspb1 (ENSKMAG00000013453) SRRM3 (ENSKMAG00000013495) ENSKMAG00000013527 c1qbp (ENSKMAG00000013558) dhx33 (ENSKMAG00000013595) p2rx1 (ENSKMAG00000013653) camkk1a (ENSKMAG00000013707) ATP2A3 (ENSKMAG00000013769) ZZEF1 (ENSKMAG00000013876) cyb5d2 (ENSKMAG00000013997) ankfy1 (ENSKMAG00000014039) ube2g1a (ENSKMAG00000014121) spns3 (ENSKMAG00000014148) SPNS2 (ENSKMAG00000014193) Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183145.D.h.b ##22 Salmoninae ANCESTRAL SPECIES 312 ENSGT00390000006633.a.q ENSGT00390000009552.j ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044.o ENSGT00390000001752.q ENSGT00940000155690.b.a.e ENSGT00940000158976.h.a ENSGT00530000063474.B.e.b ENSGT00940000154006.b.f ENSGT00510000048674 ENSGT00390000018559.h ENSGT00950000183203.d.d.l.b ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.a.b.a ENSGT00940000155882.a.a.c ENSGT00980000199127.a ENSGT00940000159210.k.a ENSGT00940000159210.k.b ENSGT00390000006416 ENSGT00390000018406.b ENSGT00940000156747.k ENSGT01020000230351.C.e ENSGT00940000154890.a.a.c ENSGT00940000155668.j.c.a ENSGT00940000160156 ENSGT00940000156179.c ENSGT00940000155228.f ENSGT00390000005976.a.a.a Salmoninae_a ANCESTRAL SPECIES 44 ENSGT00390000006633.a.q ENSGT00390000009552.j ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044.o ENSGT00390000001752.q ENSGT00940000155690.b.a.e ENSGT00940000158976.h.a ENSGT00530000063474.B.e.b ENSGT00940000154006.b.f ENSGT00510000048674 ENSGT00390000018559.h ENSGT00950000183203.d.d.l.b ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.a.b.a ENSGT00940000155882.a.a.c ENSGT00940000167838 ENSGT00980000199127.a ENSGT00940000162625.d ENSGT00940000159210.k.a ENSGT00390000006416 ENSGT00390000018406.b ENSGT00940000156747.k ENSGT01020000230351.C.e ENSGT00940000154890.a.a.c ENSGT00940000155668.j.c.a ENSGT00940000160156 ENSGT00940000156179.c ENSGT00940000155228.f Salmo ANCESTRAL SPECIES 17 ENSGT00390000006633.a.q ENSGT00390000009552.j.a ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044.o ENSGT00390000001752.q ENSGT00940000155690.b.a.e ENSGT00940000158976.h.a ENSGT00530000063474.B.e.b ENSGT00940000154006.b.f ENSGT00510000048674.j ENSGT00390000018559.h ENSGT00950000183203.d.d.l.b ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.a.b.a ENSGT00980000199127.a ENSGT00940000155882.a.a.c ENSGT00940000162625.d ENSGT00940000159210.k.a ENSGT00390000006416 ENSGT00390000018406.b ENSGT00940000156747.k ENSGT01020000230351.C.e ENSGT00940000154890.a.a.c ENSGT00940000155668.j.c.a ENSGT00940000160156 ENSGT00940000156179.c ENSGT00940000155228.f ENSGT00390000005976.a.a.a River trout MODERN SPECIES 10 pigw (ENSSTUG00000021387) MYO19 (ENSSTUG00000021399) znhit3 (ENSSTUG00000021500) nupr1a (ENSSTUG00000021511) vkorc1l1 (ENSSTUG00000021517) GUSB (ENSSTUG00000021537) ca4a (ENSSTUG00000022230) MTMR4 (ENSSTUG00000022258) hpda (ENSSTUG00000022568) ENSSTUG00000023675 ENSSTUG00000023687 supt4h1 (ENSSTUG00000023710) ENSSTUG00000023733 ENSSTUG00000023784 ENSSTUG00000023786 ENSSTUG00000023800 ##22 YWHAG (ENSSTUG00000023899) hspb1 (ENSSTUG00000023907) ENSSTUG00000023922 ENSSTUG00000023923 ENSSTUG00000023946 rpain (ENSSTUG00000024111) c1qbp (ENSSTUG00000024132) dhx33 (ENSSTUG00000024151) p2rx1 (ENSSTUG00000024252) ENSSTUG00000024297 camkk1a (ENSSTUG00000024334) ATP2A3 (ENSSTUG00000024544) ENSSTUG00000026426 cyb5d2 (ENSSTUG00000026434) ankfy1 (ENSSTUG00000026462) Atlantic salmon MODERN SPECIES 23 SAP30L (ENSSSAG00000064652) ggnbp2 (ENSSSAG00000064606) pigw (ENSSSAG00000064599) myo19 (ENSSSAG00000064331) znhit3 (ENSSSAG00000064315) vkorc1l1 (ENSSSAG00000101858) ENSSSAG00000063558 ca4a (ENSSSAG00000062204) MTMR4 (ENSSSAG00000061898) hpda (ENSSSAG00000062406) ENSSSAG00000062256 ENSSSAG00000063520 supt4h1 (ENSSSAG00000063502) ENSSSAG00000105652 ENSSSAG00000061595 ENSSSAG00000038823 ##22 YWHAG (ENSSSAG00000093880) ENSSSAG00000061449 hspb1 (ENSSSAG00000088803) SRRM3 (ENSSSAG00000090322) rpain (ENSSSAG00000061383) c1qbp (ENSSSAG00000061401) DHX33 (ENSSSAG00000061210) ENSSSAG00000061168 p2rx1 (ENSSSAG00000061104) ENSSSAG00000095623 camkk1a (ENSSSAG00000061029) atp2a3 (ENSSSAG00000020900) cyb5d2 (ENSSSAG00000015825) ankfy1 (ENSSSAG00000015511) ube2g1a (ENSSSAG00000015419) Oncorhynchus ANCESTRAL SPECIES 41 ENSGT00390000006633.a.q ENSGT00390000009552.j ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044.o ENSGT00390000001752.q ENSGT00940000155690.b.a.e ENSGT00940000158976.h.a ENSGT00530000063474.B.e.b ENSGT00940000154006.b.f ENSGT00510000048674 ENSGT00390000018559.h ENSGT00950000183203.d.d.l.b ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.a.b.a ENSGT00980000199127.a ENSGT00940000155882.a.a.c ENSGT00940000167838 ENSGT00390000006416 ENSGT00390000018406.b ENSGT00940000156747.k ENSGT01020000230351.C.e ENSGT00940000154890.a.a.c ENSGT00940000155668.j.c.a ENSGT00940000160156 ENSGT00940000156179.c ENSGT00940000155228.f ENSGT00390000005976.a.a.a ENSGT00940000154735.c.f Oncorhynchus_a ANCESTRAL SPECIES 43 ENSGT00940000161111.b ENSGT00390000006633.a.q ENSGT00390000009552.j ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044.o ENSGT00390000001752.q ENSGT00940000155690.b.a.e ENSGT00940000158976.h.a ENSGT00530000063474.B.e.b ENSGT00940000154006.b.f ENSGT00510000048674 ENSGT00390000018559.h ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.a.b.a ENSGT00980000199127.a ENSGT00940000155882.a.a.c ENSGT00940000167838 ENSGT00390000006416 ENSGT00390000018406.b ENSGT00940000156747.k ENSGT01020000230351.C.e ENSGT00940000154890.a.a.c ENSGT00940000155668.j.c.a ENSGT00940000160156 ENSGT00940000156179.c ENSGT00940000155228.f ENSGT00390000005976.a.a.a ENSGT00940000154735.c.f Chinook salmon MODERN SPECIES 23 hnrnph1l (ENSOTSG00005039622) zgc:110540 (ENSOTSG00005039619) ENSOTSG00005039618 ankhd1 (ENSOTSG00005035483) eif4ebp3 (ENSOTSG00005035463) mat2b (ENSOTSG00005035459) TENM2 (ENSOTSG00005035455) fnip1 (ENSOTSG00005032634) ENSOTSG00005014821 irf1b (ENSOTSG00005014793) slc22a4 (ENSOTSG00005014781) ENSOTSG00005014779 slc22a21 (ENSOTSG00005014778) ENSOTSG00005014774 YWHAG (ENSOTSG00005014773) ENSOTSG00005014771 ##22 ENSOTSG00005014766 GUSB (ENSOTSG00005014740) vkorc1l1 (ENSOTSG00005014737) znhit3 (ENSOTSG00005014736) MYO19 (ENSOTSG00005014730) pigw (ENSOTSG00005014726) ggnbp2 (ENSOTSG00005014725) SAP30L (ENSOTSG00005014724) HAND1 (ENSOTSG00005014723) pitx1 (ENSOTSG00005014673) ENSOTSG00005014669 PCBD2 (ENSOTSG00005014663) txndc15 (ENSOTSG00005014662) zgc:77058 (ENSOTSG00005014660) ddx46 (ENSOTSG00005013757) Coho salmon MODERN SPECIES 20 MYO19 (ENSOKIG00005037734) znhit3 (ENSOKIG00005037678) nupr1a (ENSOKIG00005037652) vkorc1l1 (ENSOKIG00005037628) ENSOKIG00005037621 GUSB (ENSOKIG00005037088) ca4a (ENSOKIG00005037012) MTMR4 (ENSOKIG00005031326) hpda (ENSOKIG00005029330) ENSOKIG00005029203 ENSOKIG00005029168 supt4h1 (ENSOKIG00005029125) ENSOKIG00005029108 ENSOKIG00005029099 ENSOKIG00005029084 ENSOKIG00005029035 ##22 YWHAG (ENSOKIG00005029011) ENSOKIG00005029002 hspb1 (ENSOKIG00005028984) ENSOKIG00005028954 rpain (ENSOKIG00005028939) c1qbp (ENSOKIG00005028920) dhx33 (ENSOKIG00005028861) p2rx1 (ENSOKIG00005028810) camkk1a (ENSOKIG00005028794) ATP2A3 (ENSOKIG00005028180) cyb5d2 (ENSOKIG00005028140) ankfy1 (ENSOKIG00005027816) ube2g1a (ENSOKIG00005027766) spns3 (ENSOKIG00005027568) HNRNPAB (ENSOKIG00005027535) Rainbow trout MODERN SPECIES 1 vkorc1l1 (ENSOMYG00000012271) ENSOMYG00000012284 ca4a (ENSOMYG00000012310) ENSOMYG00000058807 MTMR4 (ENSOMYG00000050775) hpda (ENSOMYG00000012394) ENSOMYG00000012405 ENSOMYG00000068894 ENSOMYG00000012338 supt4h1 (ENSOMYG00000012356) ENSOMYG00000066677 ENSOMYG00000064225 ENSOMYG00000058389 ENSOMYG00000073703 ENSOMYG00000059200 ENSOMYG00000064853 ##22 YWHAG (ENSOMYG00000012532) ENSOMYG00000068171 hspb1 (ENSOMYG00000048428) ENSOMYG00000056928 ENSOMYG00000048882 SRRM3 (ENSOMYG00000071000) C1QBP (ENSOMYG00000012574) rpain (ENSOMYG00000012555) ENSOMYG00000012586 p2rx1 (ENSOMYG00000060599) camkk1a (ENSOMYG00000057855) ENSOMYG00000055996 ENSOMYG00000012654 ATP2A3 (ENSOMYG00000073064) cyb5d2 (ENSOMYG00000012681) Huchen MODERN SPECIES 6550 ENSHHUG00000005024 ##22 ENSHHUG00000005014 ##22 Osteoglossocephalai ANCESTRAL SPECIES 7 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Clupeocephala ANCESTRAL SPECIES 33 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Euteleosteomorpha ANCESTRAL SPECIES 35 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 Acanthomorphata ANCESTRAL SPECIES 14 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Euacanthomorphacea ANCESTRAL SPECIES 19 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Percomorphaceae ANCESTRAL SPECIES 9 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000169226 ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 Tiger tail seahorse MODERN SPECIES 455 ENSHCOG00000010333 ENSHCOG00000010358 stip1 (ENSHCOG00000010419) rps6ka4 (ENSHCOG00000010506) FLRT1 (ENSHCOG00000010522) zfpl1 (ENSHCOG00000010546) rom1a (ENSHCOG00000010559) frmd8 (ENSHCOG00000010570) ENSHCOG00000010580 ca4a (ENSHCOG00000010648) MTMR4 (ENSHCOG00000010677) hpda (ENSHCOG00000010695) ENSHCOG00000010722 supt4h1 (ENSHCOG00000010739) ENSHCOG00000011006 ENSHCOG00000011053 ##22 YWHAG (ENSHCOG00000011071) hspb1 (ENSHCOG00000011077) ENSHCOG00000011092 ENSHCOG00000011104 c1qbp (ENSHCOG00000011124) dhx33 (ENSHCOG00000011161) p2rx1 (ENSHCOG00000011183) camkk1a (ENSHCOG00000011215) ATP2A3 (ENSHCOG00000011269) ZZEF1 (ENSHCOG00000011860) cyb5d2 (ENSHCOG00000011921) ankfy1 (ENSHCOG00000011942) ube2g1a (ENSHCOG00000011959) spns3 (ENSHCOG00000011991) SPNS2 (ENSHCOG00000012022) Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 Ovalentaria ANCESTRAL SPECIES 11 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Ovalentaria_B ANCESTRAL SPECIES 26 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a ENSGT00940000178429 Cichlidae ANCESTRAL SPECIES 4 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179.f ENSGT00940000155228 ENSGT00390000005976.a.a.a ENSGT00940000178429 Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752.f ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 Pseudocrenilabrinae_A ANCESTRAL SPECIES 21 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752.f ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 Haplochromini ANCESTRAL SPECIES 8 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752.f ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 Burton s mouthbrooder MODERN SPECIES 366 dhrs11a (ENSHBUG00000022109) ggnbp2 (ENSHBUG00000022155) pigw (ENSHBUG00000022160) MYO19 (ENSHBUG00000022172) znhit3 (ENSHBUG00000022191) nupr1a (ENSHBUG00000022221) vkorc1l1 (ENSHBUG00000022231) GUSB (ENSHBUG00000022277) ca4a (ENSHBUG00000022287) MTMR4 (ENSHBUG00000022409) hpda (ENSHBUG00000022467) RNF43 (ENSHBUG00000022487) ENSHBUG00000022507 supt4h1 (ENSHBUG00000022528) ENSHBUG00000022627 ENSHBUG00000022677 ##22 Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752.f ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000169226 ENSGT00940000162625 ENSGT00940000159210 P. nyererei MODERN SPECIES 375 ggnbp2 (ENSPNYG00000017152) pigw (ENSPNYG00000017136) MYO19 (ENSPNYG00000017112) znhit3 (ENSPNYG00000017092) nupr1a (ENSPNYG00000017053) vkorc1l1 (ENSPNYG00000017038) GUSB (ENSPNYG00000017001) ca4a (ENSPNYG00000016968) MTMR4 (ENSPNYG00000016931) hpda (ENSPNYG00000016877) RNF43 (ENSPNYG00000016870) ENSPNYG00000016853 supt4h1 (ENSPNYG00000016837) ENSPNYG00000016804 ENSPNYG00000016783 ENSPNYG00000016764 ##22 YWHAG (ENSPNYG00000016757) hspb1 (ENSPNYG00000016744) ENSPNYG00000016724 ENSPNYG00000016708 Haplochromini_B ANCESTRAL SPECIES 26 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752.f ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000169226 ENSGT00940000162625 ENSGT00940000159210 Eastern happy MODERN SPECIES 1 ENSACLG00000006354 dhrs11a (ENSACLG00000006348) ggnbp2 (ENSACLG00000006317) pigw (ENSACLG00000006310) MYO19 (ENSACLG00000006286) znhit3 (ENSACLG00000006281) nupr1a (ENSACLG00000006268) vkorc1l1 (ENSACLG00000006263) GUSB (ENSACLG00000005864) ca4a (ENSACLG00000005855) MTMR4 (ENSACLG00000005778) hpda (ENSACLG00000005754) ENSACLG00000005743 supt4h1 (ENSACLG00000005475) ENSACLG00000005363 ENSACLG00000005349 ##22 YWHAG (ENSACLG00000005342) hspb1 (ENSACLG00000005318) ENSACLG00000005306 ENSACLG00000005304 SRRM3 (ENSACLG00000005269) ENSACLG00000005111 ZPLD1 (ENSACLG00000005045) alcama (ENSACLG00000004991) ENSACLG00000004866 CBLB (ENSACLG00000004741) ENSACLG00000004726 akt2l (ENSACLG00000004632) ENSACLG00000004539 ENSACLG00000004523 ENSACLG00000004459 Nile tilapia MODERN SPECIES 1 pigw (ENSONIG00000020869) MYO19 (ENSONIG00000012773) znhit3 (ENSONIG00000012772) nupr1a (ENSONIG00000041561) ENSONIG00000031767 ENSONIG00000033753 vkorc1l1 (ENSONIG00000012771) GUSB (ENSONIG00000012762) ca4a (ENSONIG00000012757) MTMR4 (ENSONIG00000012753) hpda (ENSONIG00000012748) ENSONIG00000038681 ENSONIG00000039780 supt4h1 (ENSONIG00000043158) TSPOAP1 (ENSONIG00000012739) ENSONIG00000012737 ##22 YWHAG (ENSONIG00000012735) hspb1 (ENSONIG00000012734) SRRM3 (ENSONIG00000012732) ENSONIG00000039009 ENSONIG00000037491 ENSONIG00000035301 ENSONIG00000012854 ENSONIG00000030243 ENSONIG00000012860 msna (ENSONIG00000012861) ZC3H12B (ENSONIG00000012867) amer1 (ENSONIG00000040456) ENSONIG00000031583 ENSONIG00000012870 aifm1 (ENSONIG00000012871) Pomacentridae ANCESTRAL SPECIES 42 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00940000164475 ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a Pomacentridae_A ANCESTRAL SPECIES 3 ENSGT00940000159359 ENSGT00940000157189.c ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a ENSGT00390000005976.a.a.b Amphiprion ANCESTRAL SPECIES 72 ENSGT00940000159359 ENSGT00940000182231 ENSGT00940000157189.c ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000169226 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a ENSGT00390000005976.a.a.b Clown anemonefish MODERN SPECIES 786 ENSAOCG00000022578 alcama (ENSAOCG00000022564) ENSAOCG00000022549 ca4a (ENSAOCG00000022543) MTMR4 (ENSAOCG00000022510) ENSAOCG00000022451 hpda (ENSAOCG00000022425) ENSAOCG00000022381 ENSAOCG00000022362 supt4h1 (ENSAOCG00000022349) ENSAOCG00000022317 ENSAOCG00000022205 ##22 YWHAG (ENSAOCG00000022183) hspb1 (ENSAOCG00000002578) TMEM70 (ENSAOCG00000022127) ENSAOCG00000022122 Orange clownfish MODERN SPECIES 6 ENSAPEG00000012630 akt2l (ENSAPEG00000012650) ENSAPEG00000012698 ENSAPEG00000012718 ENSAPEG00000012776 alcama (ENSAPEG00000012831) ENSAPEG00000012846 ca4a (ENSAPEG00000012858) MTMR4 (ENSAPEG00000012940) hpda (ENSAPEG00000013058) ENSAPEG00000013140 ENSAPEG00000013152 supt4h1 (ENSAPEG00000013170) ENSAPEG00000013189 ENSAPEG00000013231 ENSAPEG00000013272 ##22 YWHAG (ENSAPEG00000013287) hspb1 (ENSAPEG00000013295) ENSAPEG00000013307 ENSAPEG00000013328 c1qbp (ENSAPEG00000013414) dhx33 (ENSAPEG00000013599) p2rx1 (ENSAPEG00000013679) camkk1a (ENSAPEG00000013729) ENSAPEG00000013838 ATP2A3 (ENSAPEG00000013892) ZZEF1 (ENSAPEG00000013980) cyb5d2 (ENSAPEG00000014167) ankfy1 (ENSAPEG00000014177) ube2g1a (ENSAPEG00000014285) spns3 (ENSAPEG00000014311) Spiny chromis MODERN SPECIES 672 ENSAPOG00000009921 ##22 YWHAG (ENSAPOG00000009936) hspb1 (ENSAPOG00000009968) SRRM3 (ENSAPOG00000000288) ENSAPOG00000010036 c1qbp (ENSAPOG00000010074) dhx33 (ENSAPOG00000010132) p2rx1 (ENSAPOG00000010175) camkk1a (ENSAPOG00000010216) ENSAPOG00000010368 Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Oryzias ANCESTRAL SPECIES 14 ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01100000263514.A.f.w.b ENSGT00950000183089.c.a.k.b.b.j ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 ENSGT00940000160156 Oryzias_a ANCESTRAL SPECIES 2 ENSGT00960000193219 ENSGT00390000009724.c ENSGT00940000166102 ENSGT00940000162978.a.a.b ENSGT00940000153556.B ENSGT01020000230351.E.d ENSGT00940000163900 ENSGT00940000157820.a.a ENSGT00940000162439 ENSGT00390000003183 ENSGT00390000018434 ENSGT00940000155093.b ENSGT00390000017523 ENSGT01030000234555.a.a.a.c.a ENSGT00940000153592.B.a ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT00990000203553.c.a.a.b.a.a.a.a.b.n ENSGT01100000263559.A ENSGT00950000183089.c.a.k.b.b.j ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000174983 ENSGT00940000155668.j ENSGT01060000250877 ENSGT00940000155045 Chinese medaka MODERN SPECIES 1129 cltca (ENSOSIG00000022291) ENSOSIG00000022224 atp5l (ENSOSIG00000022221) ftr82 (ENSOSIG00000022213) ftr83 (ENSOSIG00000022204) ruvbl2 (ENSOSIG00000022140) p2rx5 (ENSOSIG00000022107) ENSOSIG00000022095 UBB (ENSOSIG00000022094) CENPV (ENSOSIG00000022092) pigl (ENSOSIG00000022090) ncor1 (ENSOSIG00000022073) zswim7 (ENSOSIG00000022055) adora2b (ENSOSIG00000022048) SPECC1 (ENSOSIG00000022044) ENSOSIG00000022020 ##22 YWHAG (ENSOSIG00000022008) hspb1 (ENSOSIG00000022005) ENSOSIG00000022004 ENSOSIG00000021997 c1qbp (ENSOSIG00000021992) dhx33 (ENSOSIG00000021988) ENSOSIG00000021976 ENSOSIG00000021975 ENSOSIG00000021972 ENSOSIG00000021969 p2rx1 (ENSOSIG00000021966) camkk1a (ENSOSIG00000021963) ENSOSIG00000021956 ATP2A3 (ENSOSIG00000020170) ZZEF1 (ENSOSIG00000019949) Japanese Medaka HdrR MODERN SPECIES 5 ptrh2 (ENSORLG00000012183) cltca (ENSORLG00000012174) ENSORLG00000025547 atp5l (ENSORLG00000012113) ftr82 (ENSORLG00000012100) ftr83 (ENSORLG00000012084) ruvbl2 (ENSORLG00000012078) p2rx5 (ENSORLG00000012047) ubb (ENSORLG00000012032) CENPV (ENSORLG00000012007) pigl (ENSORLG00000029758) ncor1 (ENSORLG00000011992) zswim7 (ENSORLG00000011920) adora2b (ENSORLG00000011912) SPECC1 (ENSORLG00000011906) ENSORLG00000011875 ##22 ENSORLG00000025922 ENSORLG00000026558 ENSORLG00000026242 ENSORLG00000011864 c1qbp (ENSORLG00000011846) dhx33 (ENSORLG00000011817) ENSORLG00000029258 ENSORLG00000027210 ENSORLG00000000697 ENSORLG00000011785 p2rx1 (ENSORLG00000011773) camkk1a (ENSORLG00000011726) ATP2A3 (ENSORLG00000011700) ENSORLG00000022979 ZZEF1 (ENSORLG00000011663) Oryzias_b ANCESTRAL SPECIES 160 ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a Indian medaka MODERN SPECIES 4 spns3 (ENSOMEG00000009660) ube2g1a (ENSOMEG00000009858) ankfy1 (ENSOMEG00000009995) ENSOMEG00000010022 ZZEF1 (ENSOMEG00000010131) ENSOMEG00000010165 ENSOMEG00000010176 ATP2A3 (ENSOMEG00000010194) camkk1a (ENSOMEG00000010256) p2rx1 (ENSOMEG00000010296) ENSOMEG00000010316 ENSOMEG00000010325 ENSOMEG00000010370 ENSOMEG00000010388 dhx33 (ENSOMEG00000010438) ENSOMEG00000010471 ##22 YWHAG (ENSOMEG00000010491) SPECC1 (ENSOMEG00000010532) ENSOMEG00000010552 adora2b (ENSOMEG00000010566) ENSOMEG00000010582 ncor1 (ENSOMEG00000010603) CENPV (ENSOMEG00000010631) pigl (ENSOMEG00000010656) ENSOMEG00000010669 p2rx5 (ENSOMEG00000010703) ruvbl2 (ENSOMEG00000010777) ftr83 (ENSOMEG00000010804) ftr82 (ENSOMEG00000000262) atp5l (ENSOMEG00000010869) nherf4b (ENSOMEG00000010884) Javanese ricefish MODERN SPECIES 5 mogat2 (ENSOJAG00000010849) dgat2 (ENSOJAG00000010779) ENSOJAG00000010765 uvrag (ENSOJAG00000010249) wnt11 (ENSOJAG00000010187) ENSOJAG00000010176 PWWP2A (ENSOJAG00000009835) ENSOJAG00000009750 zgc:110540 (ENSOJAG00000009727) ENSOJAG00000009652 ENSOJAG00000009597 ENSOJAG00000009589 ints2 (ENSOJAG00000007280) ENSOJAG00000007156 ENSOJAG00000007132 ENSOJAG00000007119 ##22 YWHAG (ENSOJAG00000007090) ENSOJAG00000007021 ENSOJAG00000006907 hspb1 (ENSOJAG00000006902) ENSOJAG00000006886 ENSOJAG00000006871 ENSOJAG00000006864 pfdn1 (ENSOJAG00000006851) ttc1 (ENSOJAG00000006821) ENSOJAG00000006291 CSF1R (ENSOJAG00000006055) ENSOJAG00000006027 ENSOJAG00000006008 ENSOJAG00000005970 ENSOJAG00000016629 Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 ENSGT00940000155228 Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000175931 ENSGT00940000169226 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 Poeciliinae ANCESTRAL SPECIES 17 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000175931 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 ENSGT00940000155228 Platyfish MODERN SPECIES 2 dhrs11a (ENSXMAG00000029381) ggnbp2 (ENSXMAG00000005524) pigw (ENSXMAG00000020013) MYO19 (ENSXMAG00000005550) znhit3 (ENSXMAG00000005575) nupr1a (ENSXMAG00000020014) vkorc1l1 (ENSXMAG00000018219) GUSB (ENSXMAG00000018222) ca4a (ENSXMAG00000029936) MTMR4 (ENSXMAG00000005583) hpda (ENSXMAG00000005613) ENSXMAG00000005632 ENSXMAG00000027768 supt4h1 (ENSXMAG00000005633) ENSXMAG00000005635 ENSXMAG00000005653 ##22 YWHAG (ENSXMAG00000026649) hspb1 (ENSXMAG00000022192) ENSXMAG00000005659 SRRM3 (ENSXMAG00000005663) ENSXMAG00000005667 c1qbp (ENSXMAG00000005671) dhx33 (ENSXMAG00000005679) p2rx1 (ENSXMAG00000005701) camkk1a (ENSXMAG00000005744) ATP2A3 (ENSXMAG00000005755) ZZEF1 (ENSXMAG00000005834) cyb5d2 (ENSXMAG00000021541) ankfy1 (ENSXMAG00000005852) ENSXMAG00000023117 ube2g1a (ENSXMAG00000021404) Poecilia ANCESTRAL SPECIES 7 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000175931 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 ENSGT00940000155228 NAME_6 ANCESTRAL SPECIES 16 ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00940000164475 ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 ENSGT00940000155228 ENSGT00390000005976.a.a.a Amazon molly MODERN SPECIES 344 ENSPFOG00000023216 ##22 YWHAG (ENSPFOG00000008978) hspb1 (ENSPFOG00000008995) SRRM3 (ENSPFOG00000009007) MLXIPL (ENSPFOG00000009039) c1qbp (ENSPFOG00000009344) dhx33 (ENSPFOG00000009426) p2rx1 (ENSPFOG00000009666) camkk1a (ENSPFOG00000009838) ATP2A3 (ENSPFOG00000010142) ZZEF1 (ENSPFOG00000010928) cyb5d2 (ENSPFOG00000011722) ankfy1 (ENSPFOG00000011523) ube2g1a (ENSPFOG00000011752) spns3 (ENSPFOG00000011784) SPNS2 (ENSPFOG00000012057) NAME_4 ANCESTRAL SPECIES 5 ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00970000197055 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000175931 ENSGT00940000169226 ENSGT00940000159210 Sheepshead minnow MODERN SPECIES 403 ggnbp2 (ENSCVAG00000013910) pigw (ENSCVAG00000000897) MYO19 (ENSCVAG00000013931) ENSCVAG00000000352 nupr1a (ENSCVAG00000013970) vkorc1l1 (ENSCVAG00000013978) GUSB (ENSCVAG00000014013) ENSCVAG00000014022 ca4a (ENSCVAG00000014028) MTMR4 (ENSCVAG00000014065) hpda (ENSCVAG00000014147) ENSCVAG00000014156 ENSCVAG00000014169 supt4h1 (ENSCVAG00000014190) ENSCVAG00000014265 ENSCVAG00000014295 ##22 YWHAG (ENSCVAG00000014302) hspb1 (ENSCVAG00000014312) ENSCVAG00000014322 mat2b (ENSCVAG00000014345) slc23a1 (ENSCVAG00000014398) ENSCVAG00000014411 PWWP2A (ENSCVAG00000014414) ENSCVAG00000014433 zgc:110540 (ENSCVAG00000000642) Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00940000164475 ENSGT00940000162108 #26 ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 Anabantaria ANCESTRAL SPECIES 13 ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00940000164475 ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a ENSGT00390000005976.a.a.b Anabantoidei ANCESTRAL SPECIES 12 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a ENSGT00390000005976.a.a.b Siamese fighting fish MODERN SPECIES 5 dhrs11a (ENSBSLG00000019603) ggnbp2 (ENSBSLG00000019615) pigw (ENSBSLG00000019631) MYO19 (ENSBSLG00000019637) znhit3 (ENSBSLG00000019660) nupr1a (ENSBSLG00000019662) vkorc1l1 (ENSBSLG00000019664) GUSB (ENSBSLG00000019670) ca4a (ENSBSLG00000019727) MTMR4 (ENSBSLG00000019757) hpda (ENSBSLG00000020674) ENSBSLG00000020749 supt4h1 (ENSBSLG00000020753) ENSBSLG00000020756 ENSBSLG00000020761 ENSBSLG00000020766 ##22 YWHAG (ENSBSLG00000020770) hspb1 (ENSBSLG00000020771) ENSBSLG00000020772 ENSBSLG00000020773 c1qbp (ENSBSLG00000020775) dhx33 (ENSBSLG00000020779) p2rx1 (ENSBSLG00000020792) camkk1a (ENSBSLG00000020815) ENSBSLG00000020824 ATP2A3 (ENSBSLG00000020850) ZZEF1 (ENSBSLG00000021871) cyb5d2 (ENSBSLG00000022432) ankfy1 (ENSBSLG00000022451) ube2g1a (ENSBSLG00000022583) spns3 (ENSBSLG00000022634) Carangaria ANCESTRAL SPECIES 16 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00980000199127 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a Pleuronectoidei ANCESTRAL SPECIES 27 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.b ENSGT00940000153556.B Tongue sole MODERN SPECIES 10 klf8 (ENSCSEG00000010478) rbm41 (ENSCSEG00000010491) cldn2 (ENSCSEG00000010506) CLIP2 (ENSCSEG00000010519) GTF2IRD1 (ENSCSEG00000010605) dtx2 (ENSCSEG00000010666) tmem132e (ENSCSEG00000010685) ca4a (ENSCSEG00000010729) MTMR4 (ENSCSEG00000010749) hpda (ENSCSEG00000010853) ENSCSEG00000010880 ENSCSEG00000010885 ENSCSEG00000010890 supt4h1 (ENSCSEG00000010897) ENSCSEG00000010919 ENSCSEG00000010953 ##22 YWHAG (ENSCSEG00000010962) ENSCSEG00000010966 hspb1 (ENSCSEG00000010973) SRRM3 (ENSCSEG00000010978) ENSCSEG00000010991 c1qbp (ENSCSEG00000011004) dhx33 (ENSCSEG00000011017) p2rx1 (ENSCSEG00000011044) camkk1a (ENSCSEG00000011071) ATP2A3 (ENSCSEG00000011132) ZZEF1 (ENSCSEG00000011204) cyb5d2 (ENSCSEG00000011274) ankfy1 (ENSCSEG00000011282) ube2g1a (ENSCSEG00000011314) SPNS2 (ENSCSEG00000011335) Turbot MODERN SPECIES 16 dhrs11a (ENSSMAG00000027817) ggnbp2 (ENSSMAG00000000327) pigw (ENSSMAG00000000328) MYO19 (ENSSMAG00000000332) znhit3 (ENSSMAG00000034762) nupr1a (ENSSMAG00000000346) vkorc1l1 (ENSSMAG00000000351) ENSSMAG00000000354 ca4a (ENSSMAG00000000365) MTMR4 (ENSSMAG00000000372) hpda (ENSSMAG00000000394) ENSSMAG00000000408 ENSSMAG00000000413 supt4h1 (ENSSMAG00000037724) ENSSMAG00000000427 ENSSMAG00000000445 ##22 ENSSMAG00000000452 ##22 ENSSMAG00000022653 hspb1 (ENSSMAG00000000460) ENSSMAG00000000472 ENSSMAG00000000485 c1qbp (ENSSMAG00000000492) ENSSMAG00000000497 p2rx1 (ENSSMAG00000000512) camkk1a (ENSSMAG00000000541) ATP2A3 (ENSSMAG00000000561) ZZEF1 (ENSSMAG00000000586) cyb5d2 (ENSSMAG00000000640) ankfy1 (ENSSMAG00000000642) ube2g1a (ENSSMAG00000000657) SPNS2 (ENSSMAG00000000663) Eupercaria ANCESTRAL SPECIES 17 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 ENSGT00940000155228 Eupecaria_A ANCESTRAL SPECIES 17 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000176156 ENSGT00940000155228 Ballan wrasse MODERN SPECIES 841 ENSLBEG00000018347 ENSLBEG00000018333 supt4h1 (ENSLBEG00000018308) ENSLBEG00000018117 ENSLBEG00000018011 ##22 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000183145.D.i ##22 Eupecaria_C ANCESTRAL SPECIES ENSGT00950000183145.D.i ##22 Gilthead seabream MODERN SPECIES 4 ggnbp2 (ENSSAUG00010025240) pigw (ENSSAUG00010025244) MYO19 (ENSSAUG00010025247) znhit3 (ENSSAUG00010025319) nupr1a (ENSSAUG00010025320) vkorc1l1 (ENSSAUG00010001495) GUSB (ENSSAUG00010001515) GUSB (ENSSAUG00010001569) ca4a (ENSSAUG00010001721) MTMR4 (ENSSAUG00010001783) hpda (ENSSAUG00010002041) ENSSAUG00010002069 ENSSAUG00010002075 supt4h1 (ENSSAUG00010002081) ENSSAUG00010002091 ENSSAUG00010002112 ##22 YWHAG (ENSSAUG00010002117) hspb1 (ENSSAUG00010002121) SRRM3 (ENSSAUG00010002126) ENSSAUG00010002153 c1qbp (ENSSAUG00010002352) dhx33 (ENSSAUG00010002363) p2rx1 (ENSSAUG00010002372) camkk1a (ENSSAUG00010002379) ATP2A3 (ENSSAUG00010002421) ZZEF1 (ENSSAUG00010002682) cyb5d2 (ENSSAUG00010003511) ankfy1 (ENSSAUG00010003524) ube2g1a (ENSSAUG00010003552) spns3 (ENSSAUG00010003638) SPNS2 (ENSSAUG00010004050) Perciformes ANCESTRAL SPECIES 25 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT00940000164475 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 Cottioidei ANCESTRAL SPECIES 10 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT00940000164475 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00940000161127 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a Lumpfish MODERN SPECIES 5 dhrs11a (ENSCLMG00005006816) ggnbp2 (ENSCLMG00005006818) pigw (ENSCLMG00005006819) MYO19 (ENSCLMG00005006826) znhit3 (ENSCLMG00005006895) nupr1a (ENSCLMG00005006896) vkorc1l1 (ENSCLMG00005006897) GUSB (ENSCLMG00005006899) ca4a (ENSCLMG00005006971) MTMR4 (ENSCLMG00005007015) hpda (ENSCLMG00005012571) ENSCLMG00005012575 ENSCLMG00005012577 supt4h1 (ENSCLMG00005012578) TSPOAP1 (ENSCLMG00005012580) ENSCLMG00005012594 ##22 ENSCLMG00005012598 YWHAG (ENSCLMG00005012599) hspb1 (ENSCLMG00005012600) ENSCLMG00005012601 c1qbp (ENSCLMG00005012602) dhx33 (ENSCLMG00005012603) p2rx1 (ENSCLMG00005012604) camkk1a (ENSCLMG00005012605) ATP2A3 (ENSCLMG00005012606) ZZEF1 (ENSCLMG00005014272) cyb5d2 (ENSCLMG00005015627) ankfy1 (ENSCLMG00005015633) ube2g1a (ENSCLMG00005015661) spns3 (ENSCLMG00005015673) SPNS2 (ENSCLMG00005015818) Perciformes_a ANCESTRAL SPECIES 26 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 ENSGT00940000155228 ENSGT00390000005976.a.a.a Channel bull blenny MODERN SPECIES 5 dhrs11a (ENSCGOG00000021134) ggnbp2 (ENSCGOG00000021081) pigw (ENSCGOG00000021079) MYO19 (ENSCGOG00000021002) znhit3 (ENSCGOG00000021000) nupr1a (ENSCGOG00000020999) vkorc1l1 (ENSCGOG00000020997) GUSB (ENSCGOG00000020803) ca4a (ENSCGOG00000020775) MTMR4 (ENSCGOG00000019100) hpda (ENSCGOG00000019035) ENSCGOG00000019031 ENSCGOG00000019030 supt4h1 (ENSCGOG00000019024) ENSCGOG00000019019 ENSCGOG00000019016 ##22 YWHAG (ENSCGOG00000019009) hspb1 (ENSCGOG00000019001) ENSCGOG00000018999 MLXIPL (ENSCGOG00000018987) c1qbp (ENSCGOG00000018985) dhx33 (ENSCGOG00000018973) ENSCGOG00000018972 p2rx1 (ENSCGOG00000018828) camkk1a (ENSCGOG00000018815) ATP2A3 (ENSCGOG00000018525) ZZEF1 (ENSCGOG00000018390) cyb5d2 (ENSCGOG00000018382) ankfy1 (ENSCGOG00000018337) ube2g1a (ENSCGOG00000018326) spns3 (ENSCGOG00000018037) Tetraodontidae ANCESTRAL SPECIES 28 ENSGT00940000156179 ENSGT00840000129887.g.b ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00940000163549.i.a ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.a.b ENSGT00940000155882.a.a ENSGT00960000186914 ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000153592.B.a ENSGT01030000234555.a.a.a.c.a ENSGT00390000017523 Fugu MODERN SPECIES 8 TMC8 (ENSTRUG00000012697) TMC6 (ENSTRUG00000012500) NOTUM (ENSTRUG00000012438) NOTUM (ENSTRUG00000023602) aspscr1 (ENSTRUG00000012353) ENSTRUG00000012323 ENSTRUG00000012095 MAFG (ENSTRUG00000026437) ENSTRUG00000026592 SIRT7 (ENSTRUG00000011956) pcyt2 (ENSTRUG00000011781) gnav1 (ENSTRUG00000011603) npb (ENSTRUG00000011590) sgsh (ENSTRUG00000011472) slc26a11 (ENSTRUG00000011404) ENSTRUG00000021974 ##22 ENSTRUG00000011378 ##22 ENSTRUG00000028310 ENSTRUG00000027444 ##22 ENSTRUG00000023370 nanos3 (ENSTRUG00000027071) ENSTRUG00000019953 ENSTRUG00000011003 mri1 (ENSTRUG00000010929) c17h19orf53 (ENSTRUG00000025986) ENSTRUG00000020299 ENSTRUG00000010552 khsrp (ENSTRUG00000026489) RFX1 (ENSTRUG00000010058) DCAF15 (ENSTRUG00000010245) TNPO2 (ENSTRUG00000009453) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000000820 ENSTNIG00000004199 ENSTNIG00000004198 trim33 (ENSTNIG00000004197) slc66a1 (ENSTNIG00000004196) nr1h5 (ENSTNIG00000004195) ENSTNIG00000004194 TAAR1 (ENSTNIG00000000404) stard10 (ENSTNIG00000004193) ENSTNIG00000002324 LONRF1 (ENSTNIG00000004186) hdlbpa (ENSTNIG00000004185) ccm2 (ENSTNIG00000004176) fam167ab (ENSTNIG00000000402) sh3bgrl2 (ENSTNIG00000001189) ENSTNIG00000004175 ##22 setd7 (ENSTNIG00000004161) fignl1 (ENSTNIG00000004160) ikzf1 (ENSTNIG00000004159) nr2f1a (ENSTNIG00000004157) loxl5b (ENSTNIG00000000510) nmrk2 (ENSTNIG00000000297) ATCAY (ENSTNIG00000004156) ENSTNIG00000004155 ENSTNIG00000004154 PRDM15 (ENSTNIG00000004148) bcap31 (ENSTNIG00000004147) plxna3 (ENSTNIG00000004146) ENSTNIG00000004145 GGA1 (ENSTNIG00000004144) ENSTNIG00000002437 Tetraodon MODERN SPECIES 22 ube2g1a (ENSTNIG00000008566) ankfy1 (ENSTNIG00000008565) dhrs11a (ENSTNIG00000008564) pigw (ENSTNIG00000008563) MYO19 (ENSTNIG00000008562) znhit3 (ENSTNIG00000008561) vkorc1l1 (ENSTNIG00000008560) GUSB (ENSTNIG00000008559) ca4a (ENSTNIG00000008558) MTMR4 (ENSTNIG00000008557) hpda (ENSTNIG00000008556) ENSTNIG00000008555 ENSTNIG00000008554 supt4h1 (ENSTNIG00000008553) ENSTNIG00000008552 ENSTNIG00000008551 ##22 YWHAG (ENSTNIG00000000725) hspb1 (ENSTNIG00000008550) SRRM3 (ENSTNIG00000008549) ENSTNIG00000008548 c1qbp (ENSTNIG00000008547) dhx33 (ENSTNIG00000008546) p2rx1 (ENSTNIG00000008545) camkk1a (ENSTNIG00000008544) ATP2A3 (ENSTNIG00000008543) ZZEF1 (ENSTNIG00000008542) cyb5d2 (ENSTNIG00000008541) SPECC1 (ENSTNIG00000008540) adora2b (ENSTNIG00000008539) zswim7 (ENSTNIG00000008538) ncor1 (ENSTNIG00000008537) Otomorpha ANCESTRAL SPECIES 23 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b ENSGT00940000155882.a.a ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00940000156747 ENSGT01020000230351.C ENSGT00940000154890.a.a ENSGT00940000155668.j ENSGT00940000155045 ENSGT00940000160156 ENSGT00940000156179 Otophysi ANCESTRAL SPECIES ENSGT00950000183145.D.i ##22 Characiphysae ANCESTRAL SPECIES 65 ENSGT00940000157272.h ENSGT01030000234517.E.c ENSGT00940000158557.l ENSGT00390000017839 ENSGT00940000156747 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b.c ENSGT00940000155882.a.a ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00560000077232.B.g.b Characiphysae_b ANCESTRAL SPECIES 43 ENSGT00940000157272.h ENSGT01030000234517.E.c ENSGT00940000158557.l ENSGT00390000017839 ENSGT00940000156747 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT00950000183145.D.h.b ##22 ENSGT01090000260061.c.a.c.a.b.c ENSGT00980000199127.d ENSGT00940000162625 ENSGT00940000159210 ENSGT00390000006416 ENSGT00390000018406 ENSGT00390000010822 ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887.g.b ENSGT00940000166243 ENSGT00560000077232.B.g.b ENSGT00940000164254.b Electric eel MODERN SPECIES 151 ENSEEEG00000002047 CIT (ENSEEEG00000002042) RAB35 (ENSEEEG00000002040) rplp0 (ENSEEEG00000002037) dhx33 (ENSEEEG00000002030) nupr1a (ENSEEEG00000002029) vkorc1l1 (ENSEEEG00000002028) GUSB (ENSEEEG00000002023) ca4a (ENSEEEG00000002021) MTMR4 (ENSEEEG00000000811) hpda (ENSEEEG00000000413) ENSEEEG00000000407 ENSEEEG00000000404 supt4h1 (ENSEEEG00000000394) ENSEEEG00000000257 ENSEEEG00000000182 ##22 ywhag1 (ENSEEEG00000000139) ENSEEEG00000000113 hspb1 (ENSEEEG00000000101) MLXIPL (ENSEEEG00000023773) rpain (ENSEEEG00000023771) c1qbp (ENSEEEG00000023762) znhit3 (ENSEEEG00000023757) MYO19 (ENSEEEG00000023754) pigw (ENSEEEG00000023751) ggnbp2 (ENSEEEG00000023748) dhrs11a (ENSEEEG00000023747) ENSEEEG00000023746 flot2a (ENSEEEG00000023743) ENSEEEG00000023735 eral1 (ENSEEEG00000023729) Clupeiformes ANCESTRAL SPECIES 215 ENSGT00840000129887.g.b ENSGT00390000009552 ENSGT00390000013520 ENSGT00940000157382 ENSGT00390000010822 ENSGT00940000167280 ENSGT00940000157044 ENSGT00390000001752 ENSGT00940000155690.b.a ENSGT00940000158976 ENSGT00530000063474.B.e.b ENSGT00940000154006.b ENSGT00510000048674 ENSGT00390000018559 ENSGT00950000183203.d.d ENSGT00950000183145.D.i ##22 ENSGT01090000260061.c.a.c.a.b ENSGT00940000155882.a.a ENSGT00980000199127.d ENSGT00940000162625 ENSGT00950000183145.D.h.b ##22 Denticle herring MODERN SPECIES 324 RSPH6A (ENSDCDG00000024753) supt4h1 (ENSDCDG00000024748) ENSDCDG00000024706 ENSDCDG00000024690 ##22 YWHAG (ENSDCDG00000024687) hspb1 (ENSDCDG00000024684) ENSDCDG00000024679 SRRM3 (ENSDCDG00000024674) Spotted gar DUPLICATION Spotted gar MODERN SPECIES 121 ENSLOCG00000000518 ##22 Spotted gar MODERN SPECIES 661 ggnbp2 (ENSLOCG00000003189) pigw (ENSLOCG00000017424) MYO19 (ENSLOCG00000003147) znhit3 (ENSLOCG00000003139) ENSLOCG00000003126 ca4a (ENSLOCG00000003098) GUSB (ENSLOCG00000003067) vkorc1l1 (ENSLOCG00000003060) nupr1a (ENSLOCG00000017423) hpda (ENSLOCG00000003037) RNF43 (ENSLOCG00000003019) MTMR4 (ENSLOCG00000003001) HSF5 (ENSLOCG00000002988) supt4h1 (ENSLOCG00000002970) TSPOAP1 (ENSLOCG00000002948) ENSLOCG00000002933 ##22 ywhag1 (ENSLOCG00000002919) hspb1 (ENSLOCG00000002907) SRRM3 (ENSLOCG00000002879) itln3 (ENSLOCG00000002870) ENSLOCG00000002849 MLXIPL (ENSLOCG00000002824) rpain (ENSLOCG00000002804) c1qbp (ENSLOCG00000002779) dhx33 (ENSLOCG00000002764) camkk1a (ENSLOCG00000002745) p2rx1 (ENSLOCG00000002716) ATP2A3 (ENSLOCG00000002683) ZZEF1 (ENSLOCG00000002640) cyb5d2 (ENSLOCG00000002621) ankfy1 (ENSLOCG00000002602)