Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000157823	ENSGT00940000160232.t	ENSGT00940000162131	ENSGT00940000161658.j ##7	ENSGT00940000157162.c.b	ENSGT00940000154117.c.b.a.h #11	ENSGT00940000162522 #13	ENSGT00940000164086 #14	ENSGT00940000160655 #15	ENSGT00940000159399 #16	ENSGT00950000182767.b.a.b.b.b #17	ENSGT00390000007046.b.a.b #18	ENSGT00390000012368 #19	ENSGT00940000160033 #20	ENSGT00940000158965 #21	ENSGT00940000160957 #22	ENSGT00940000158234 #23	ENSGT00940000153881.b #24	ENSGT00940000156343 #26	ENSGT00390000014810.a #27	ENSGT00940000154733.a #28	ENSGT00940000154733.b #29	ENSGT00940000160366 #30	ENSGT00940000161512 #31	ENSGT00950000183059.b.b #32	ENSGT00390000005773 #33	ENSGT00940000157189 #34	ENSGT00920000149201	ENSGT00940000161494 #35	ENSGT00940000160518 #36	ENSGT00940000163602
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000162131	ENSGT00940000157162.d	ENSGT00940000161658.j ##7	ENSGT00940000154117.d.n #8	ENSGT00940000161670 #10	ENSGT00940000154117.c.b.a.h #11	ENSGT00940000162522 #13	ENSGT00940000164086 #14	ENSGT00940000160655 #15	ENSGT00940000159399 #16	ENSGT00950000182767.b.a.b.b.b #17	ENSGT00390000007046.b.a.b #18	ENSGT00390000012368 #19	ENSGT00940000160033 #20	ENSGT00940000158965 #21	ENSGT00940000160957 #22	ENSGT00940000158234 #23	ENSGT00940000153881.b #24	ENSGT00940000156343 #26	ENSGT00390000014810.a #27	ENSGT00940000154733.a #28	ENSGT00940000154733.b #29	ENSGT00940000160366 #30	ENSGT00940000161512 #31	ENSGT00950000183059.b.b #32	ENSGT00390000005773 #33	ENSGT00940000157189 #34	ENSGT00920000149201	ENSGT00940000161494 #35	ENSGT00940000160518 #36	ENSGT00940000163602
Alpin marmot	MODERN SPECIES	45	ENSMMMG00000019784 #7	ENSMMMG00000019786 #8	ENSMMMG00000019794 #9	ENSMMMG00000019828 #10	ENSMMMG00000019837 #11	ENSMMMG00000019850 #12	ENSMMMG00000019855 #13	ENSMMMG00000019862 #14	EGLN2 (ENSMMMG00000019875) #15	RAB4B (ENSMMMG00000019883) #16	MIA (ENSMMMG00000019889) #17	SNRPA (ENSMMMG00000019898) #18	ACTMAP (ENSMMMG00000019910) #19	ITPKC (ENSMMMG00000019931) #20	COQ8B (ENSMMMG00000019939) #21	NUMBL (ENSMMMG00000019956) #22	LTBP4 (ENSMMMG00000019981) #23	SHKBP1 (ENSMMMG00000020330) #24	ENSMMMG00000020340 #25	ENSMMMG00000020366 #26	BLVRB (ENSMMMG00000020378) #27	SERTAD3 (ENSMMMG00000020417) #28	SERTAD1 (ENSMMMG00000020422) #29	PRX (ENSMMMG00000020423) #30	HIPK4 (ENSMMMG00000020428) #31	PLD3 (ENSMMMG00000020434) #32	C19orf47 (ENSMMMG00000020442) #33	AKT2 (ENSMMMG00000020459) #34	TTC9B (ENSMMMG00000020639) #35	ENSMMMG00000020654 #36	ENSMMMG00000020659 #37
Marmotini_b	ANCESTRAL SPECIES	47	ENSGT00940000162131	ENSGT00940000157162.d	ENSGT00940000161658.j ##7	ENSGT00940000154117.c.b.a.g ##11	ENSGT00940000161670 #10	ENSGT00940000154117.c.b.a.h #11	ENSGT00940000162522 #13	ENSGT00940000164086 #14	ENSGT00940000160655 #15	ENSGT00940000159399 #16	ENSGT00950000182767.b.a.b.b.b #17	ENSGT00390000007046.b.a.b #18	ENSGT00390000012368 #19	ENSGT00940000160033 #20	ENSGT00940000158965 #21	ENSGT00940000160957 #22	ENSGT00940000158234 #23	ENSGT00940000153881.b #24	ENSGT00940000156343 #26	ENSGT00390000014810.a #27	ENSGT00940000154733.a #28	ENSGT00940000154733.b #29	ENSGT00940000160366 #30	ENSGT00940000161512 #31	ENSGT00950000183059.b.b #32	ENSGT00390000005773 #33	ENSGT00940000157189 #34	ENSGT00920000149201	ENSGT00940000161494 #35	ENSGT00940000160518 #36	ENSGT00940000163602
Arctic ground squirrel	MODERN SPECIES	497					ENSUPAG00010022407	ENSUPAG00010022410 #11	CYP2F1 (ENSUPAG00010022415) #13	ENSUPAG00010022418 #14	EGLN2 (ENSUPAG00010022428) #15	RAB4B (ENSUPAG00010022431) #16	MIA (ENSUPAG00010022433) #17	SNRPA (ENSUPAG00010022436) #18	ACTMAP (ENSUPAG00010022437) #19	ITPKC (ENSUPAG00010022439) #20	COQ8B (ENSUPAG00010022441) #21	NUMBL (ENSUPAG00010022444) #22	LTBP4 (ENSUPAG00010022450) #23	SHKBP1 (ENSUPAG00010022469) #24	SPTBN4 (ENSUPAG00010022477) #26	BLVRB (ENSUPAG00010022505) #27	SERTAD3 (ENSUPAG00010022510) #28	SERTAD1 (ENSUPAG00010022512) #29	PRX (ENSUPAG00010022513) #30	HIPK4 (ENSUPAG00010022516) #31	PLD3 (ENSUPAG00010022523) #32	C19orf47 (ENSUPAG00010022532) #33	AKT2 (ENSUPAG00010022539) #34	ENSUPAG00010022546	TTC9B (ENSUPAG00010022549) #35	MAP3K10 (ENSUPAG00010022550) #36	ENSUPAG00010022552
Squirrel	MODERN SPECIES	261	ENSSTOG00000020560	ENSSTOG00000028564 ##7	ENSSTOG00000027460 ##7	ENSSTOG00000027252 ##11	ENSSTOG00000029824 #10	ENSSTOG00000002073 #11	ENSSTOG00000026309 #13	ENSSTOG00000025347 #14	EGLN2 (ENSSTOG00000028128) #15	RAB4B (ENSSTOG00000028242) #16	MIA (ENSSTOG00000034577) #17	SNRPA (ENSSTOG00000021474) #18	ACTMAP (ENSSTOG00000020074) #19	ITPKC (ENSSTOG00000026924) #20	COQ8B (ENSSTOG00000026749) #21	NUMBL (ENSSTOG00000024997) #22	LTBP4 (ENSSTOG00000013720) #23	SHKBP1 (ENSSTOG00000004259) #24	SPTBN4 (ENSSTOG00000021798) #26	BLVRB (ENSSTOG00000002958) #27	SERTAD1 (ENSSTOG00000002948) #29	PRX (ENSSTOG00000029146) #30	HIPK4 (ENSSTOG00000005746) #31	PLD3 (ENSSTOG00000006823) #32	C19orf47 (ENSSTOG00000002933) #33	AKT2 (ENSSTOG00000002916) #34	TTC9B (ENSSTOG00000023966) #35	ENSSTOG00000004863 #36	ZNF546 (ENSSTOG00000032007)	PSMC4 (ENSSTOG00000012497)	ENSSTOG00000033027
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005019398 #10	ENSSVLG00005019274 #8	ENSSVLG00005019224 ##11	ENSSVLG00005019083 #10	ENSSVLG00005018785 ##11	ENSSVLG00005018366 #11	CYP2F1 (ENSSVLG00005018266) #13	ENSSVLG00005018131 #14	EGLN2 (ENSSVLG00005018049) #15	RAB4B (ENSSVLG00005017992) #16	MIA (ENSSVLG00005017950) #17	ENSSVLG00005017886 #18	ACTMAP (ENSSVLG00005017805) #19	ITPKC (ENSSVLG00005017701) #20	COQ8B (ENSSVLG00005017327) #21	NUMBL (ENSSVLG00005017222) #22	ENSSVLG00005017116 #23	SHKBP1 (ENSSVLG00005017016) #24	ENSSVLG00005025922 #26	ENSSVLG00005025919 #26	ENSSVLG00005025917 #27	SERTAD3 (ENSSVLG00005025913) #28	SERTAD1 (ENSSVLG00005025911) #29	PRX (ENSSVLG00005025907) #30	HIPK4 (ENSSVLG00005025904) #31	PLD3 (ENSSVLG00005025900) #32	C19orf47 (ENSSVLG00005025895) #33	ENSSVLG00005025883 #34	CCNP (ENSSVLG00005025871)	TTC9B (ENSSVLG00005025868) #35	MAP3K10 (ENSSVLG00005025865) #36