Vertebrata ANCESTRAL SPECIES ENSGT00940000155145 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000155145 #22 Euteleostomi ANCESTRAL SPECIES 135 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000165512 ENSGT00940000163102 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 Sarcopterygii ANCESTRAL SPECIES 4 ENSGT00940000159450 ENSGT00950000182962.a.b ENSGT01060000248564.b.a.b.b ENSGT00390000003601.a ENSGT00940000165070 ENSGT00940000164144 ENSGT00940000166132 ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000166620 ENSGT00390000018389 ENSGT00940000159316 ENSGT00390000014785 ENSGT01090000260082.d.a.a ENSGT00940000166318 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000165512 ENSGT00940000163102 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a ##35 ENSGT01060000249567 Tetrapoda ANCESTRAL SPECIES 20 ENSGT00950000182962.a.b ENSGT01060000248564.b.a.b.b ENSGT00390000003601.a ENSGT00940000165070 ENSGT00940000164144 ENSGT00940000166132 ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000153902.b ENSGT00940000162717 ENSGT00390000018389 ENSGT00940000159316 ENSGT00390000014785 ENSGT01090000260082.d.a.a ENSGT00940000166318 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 Amniota ANCESTRAL SPECIES 24 ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 Mammalia ANCESTRAL SPECIES 40 ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292 #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 Theria ANCESTRAL SPECIES 34 ENSGT00390000008142 ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292 #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 Eutheria ANCESTRAL SPECIES 16 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00940000161322 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000016292 #33 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253 #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292 #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253 #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000164624 #29 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 Primates ANCESTRAL SPECIES 14 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00940000157675 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00960000190005 ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000155129.B ENSGT00530000063557.b Haplorrhini ANCESTRAL SPECIES 15 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00940000157675 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000155129.B ENSGT00530000063557.b ENSGT00390000015299.a.b.b.b Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A.p ENSGT01030000234566.e.b.b.b #9 ENSGT00960000190053 ENSGT00940000155920 #10 ENSGT00940000161768.A.o ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253.b #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 Catarrhini ANCESTRAL SPECIES 17 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00940000157675 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00940000154174.s.a.a.b ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a.x ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000155129.B ENSGT01100000264478 Hominoidea ANCESTRAL SPECIES 16 ENSGT00940000161322 ENSGT00940000161768.A.p ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.o ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000161972.d.b ENSGT00940000156123.b #15 ENSGT00910000145076.b #16 ENSGT00950000183206.b.c.a.b.a.a.b #18 ENSGT00390000000854.c.b.k.a.a.b #19 ENSGT00390000002253.b #20 ENSGT00940000154281.m.b.a.a.b.b #21 ENSGT00940000155145 #22 ENSGT00910000146766 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000164624 #29 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Gibbon DUPLICATION Gibbon MODERN SPECIES 449 ENSNLEG00000030015 #7 ENSNLEG00000015174 #8 TENM1 (ENSNLEG00000015132) #9 SH2D1A (ENSNLEG00000015129) #10 ENSNLEG00000029876 #11 STAG2 (ENSNLEG00000015067) #12 XIAP (ENSNLEG00000015065) #13 THOC2 (ENSNLEG00000015055) #14 GRIA3 (ENSNLEG00000015037) #15 ENSNLEG00000028032 #16 ENSNLEG00000033559 #17 ENSNLEG00000032070 #18 GLUD2 (ENSNLEG00000018334) #19 ENSNLEG00000015031 #20 ENSNLEG00000033864 #21 C1GALT1C1 (ENSNLEG00000015030) #22 MCTS1 (ENSNLEG00000015021) #23 CUL4B (ENSNLEG00000014981) #24 LAMP2 (ENSNLEG00000014967) #25 ATP1B4 (ENSNLEG00000014953) #26 TMEM255A (ENSNLEG00000014936) #27 ZBTB33 (ENSNLEG00000032152) #28 ENSNLEG00000031826 #29 NKAP (ENSNLEG00000035399) #30 AKAP14 (ENSNLEG00000014914) #31 NDUFA1 (ENSNLEG00000030961) #32 RNF113A (ENSNLEG00000018333) #33 UPF3B (ENSNLEG00000014897) #34 ENSNLEG00000034348 #35 SOWAHD (ENSNLEG00000018332) #36 SEPTIN6 (ENSNLEG00000014873) #37 Gibbon MODERN SPECIES 9 EPAS1 (ENSNLEG00000016906) PRKCE (ENSNLEG00000016892) SRBD1 (ENSNLEG00000016877) SIX2 (ENSNLEG00000016872) ENSNLEG00000031277 CAMKMT (ENSNLEG00000016864) PREPL (ENSNLEG00000016853) SLC3A1 (ENSNLEG00000016839) ENSNLEG00000016830 ENSNLEG00000016782 ENSNLEG00000029915 ABCG8 (ENSNLEG00000016774) ABCG5 (ENSNLEG00000016764) DYNC2LI1 (ENSNLEG00000016748) PLEKHH2 (ENSNLEG00000016722) C1GALT1C1L (ENSNLEG00000016719) ##22 THADA (ENSNLEG00000031549) ENSNLEG00000030755 ##17 ZFP36L2 (ENSNLEG00000016712) ENSNLEG00000032689 HAAO (ENSNLEG00000016704) MTA3 (ENSNLEG00000016680) ENSNLEG00000035691 KCNG3 (ENSNLEG00000028561) COX7A2L (ENSNLEG00000016666) EML4 (ENSNLEG00000016639) PKDCC (ENSNLEG00000016623) ENSNLEG00000016622 SLC8A1 (ENSNLEG00000016580) ENSNLEG00000031823 THUMPD2 (ENSNLEG00000016562) Hominidae ANCESTRAL SPECIES 8 ENSGT00940000161768.A.p ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.o ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000161972.d.b ENSGT00940000156123.b #15 ENSGT00910000145076.b #16 ENSGT00950000183206.b.c.a.b.a.a.b #18 ENSGT00390000000854.c.b.k.a.a.b #19 ENSGT00390000002253.b.c #20 ENSGT00390000002253.b.d #20 ENSGT00940000154281.m.b.a.a.b.b #21 ENSGT00940000155145 #22 ENSGT00910000146766 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000164624 #29 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Orangutan DUPLICATION Orangutan MODERN SPECIES 242 DCAF12L2 (ENSPPYG00000037362) ENSPPYG00000031077 TENM1 (ENSPPYG00000020699) #9 SH2D1A (ENSPPYG00000020698) #10 STAG2 (ENSPPYG00000020697) #12 XIAP (ENSPPYG00000020696) #13 THOC2 (ENSPPYG00000020695) #14 ENSPPYG00000033691 GRIA3 (ENSPPYG00000020694) #15 ENSPPYG00000034575 ENSPPYG00000033514 GLUD2 (ENSPPYG00000020692) #19 ENSPPYG00000020691 #20 CT47B1 (ENSPPYG00000033587) #20 ENSPPYG00000039491 #21 C1GALT1C1 (ENSPPYG00000020689) #22 MCTS1 (ENSPPYG00000020687) #23 CUL4B (ENSPPYG00000020686) #24 LAMP2 (ENSPPYG00000020685) #25 ATP1B4 (ENSPPYG00000020684) #26 TMEM255A (ENSPPYG00000020683) #27 ZBTB33 (ENSPPYG00000020682) #28 ENSPPYG00000020681 #29 ENSPPYG00000035710 RHOXF1 (ENSPPYG00000020680) NKAP (ENSPPYG00000020679) #30 AKAP14 (ENSPPYG00000020678) #31 NDUFA1 (ENSPPYG00000020677) #32 RNF113A (ENSPPYG00000020676) #33 UPF3B (ENSPPYG00000020675) #34 ENSPPYG00000031124 #35 Orangutan MODERN SPECIES 14 TMEM247 (ENSPPYG00000012441) EPAS1 (ENSPPYG00000012442) PRKCE (ENSPPYG00000012443) SRBD1 (ENSPPYG00000012444) SIX2 (ENSPPYG00000012446) SIX3 (ENSPPYG00000041063) CAMKMT (ENSPPYG00000012448) PREPL (ENSPPYG00000012449) SLC3A1 (ENSPPYG00000012450) PPM1B (ENSPPYG00000012451) LRPPRC (ENSPPYG00000029532) ABCG8 (ENSPPYG00000012452) ABCG5 (ENSPPYG00000012453) DYNC2LI1 (ENSPPYG00000012454) PLEKHH2 (ENSPPYG00000012455) C1GALT1C1L (ENSPPYG00000012704) #22 THADA (ENSPPYG00000012456) ZFP36L2 (ENSPPYG00000030549) HAAO (ENSPPYG00000012459) OXER1 (ENSPPYG00000012460) MTA3 (ENSPPYG00000012461) KCNG3 (ENSPPYG00000012462) COX7A2L (ENSPPYG00000030737) EML4 (ENSPPYG00000012464) PKDCC (ENSPPYG00000012465) SLC8A1 (ENSPPYG00000030862) THUMPD2 (ENSPPYG00000012470) TMEM178A (ENSPPYG00000039093) MAP4K3 (ENSPPYG00000012472) CDKL4 (ENSPPYG00000012473) SOS1 (ENSPPYG00000012474) Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000161768.A.p ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.o ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743.e #13 ENSGT00710000106792 #14 ENSGT00940000161972.d.b ENSGT00940000156123.b #15 ENSGT00910000145076.b #16 ENSGT00950000183206.b.c.a.b.a.a.b #18 ENSGT00390000000854.c.b.k.a.a.b #19 ENSGT00390000002253.b.c #20 ENSGT00390000002253.b.d #20 ENSGT00940000154281.m.b.a.a.b.b #21 ENSGT00940000155145 #22 ENSGT00910000146766 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000164624 #29 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Gorilla MODERN SPECIES 523 DCAF12L2 (ENSGGOG00000005923) ENSGGOG00000039541 #7 TENM1 (ENSGGOG00000003488) #9 SH2D1A (ENSGGOG00000034950) #10 STAG2 (ENSGGOG00000004109) #12 ENSGGOG00000008637 #13 THOC2 (ENSGGOG00000000486) #14 ENSGGOG00000044134 GRIA3 (ENSGGOG00000009569) #15 ENSGGOG00000024589 #16 ENSGGOG00000039654 #18 GLUD2 (ENSGGOG00000022665) #19 CT47B1 (ENSGGOG00000015773) #20 ENSGGOG00000011433 #20 ENSGGOG00000037852 #21 C1GALT1C1 (ENSGGOG00000026235) #22 MCTS1 (ENSGGOG00000009420) #23 CUL4B (ENSGGOG00000011167) #24 LAMP2 (ENSGGOG00000000555) #25 ATP1B4 (ENSGGOG00000006495) #26 TMEM255A (ENSGGOG00000010310) #27 ZBTB33 (ENSGGOG00000010306) #28 RHOXF1 (ENSGGOG00000016112) ENSGGOG00000016116 #29 NKAP (ENSGGOG00000013330) #30 AKAP14 (ENSGGOG00000013328) #31 NDUFA1 (ENSGGOG00000002327) #32 RNF113A (ENSGGOG00000002324) #33 UPF3B (ENSGGOG00000023995) #34 ENSGGOG00000007847 #35 SOWAHD (ENSGGOG00000002721) #36 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00940000161768.A.p ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.o ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743.e #13 ENSGT00710000106792 #14 ENSGT00940000161972.d.b ENSGT00940000156123.b #15 ENSGT00910000145076.b #16 ENSGT00950000183206.b.c.a.b.a.a.b #18 ENSGT00390000000854.c.b.k.a.a.b #19 ENSGT00390000002253.b.c #20 ENSGT00390000002253.b.d #20 ENSGT00940000154281.m.b.a.a.b.b #21 ENSGT00940000155145 #22 ENSGT00910000146766 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000164624 #29 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Human DUPLICATION Human MODERN SPECIES 1827 GLUD2 (ENSG00000182890) #19 CT47A1 (ENSG00000236371) #20 CT47A2 (ENSG00000242362) #20 CT47A3 (ENSG00000236126) #20 CT47A4 (ENSG00000230594) #20 CT47A5 (ENSG00000237957) #20 CT47A6 (ENSG00000226023) #20 CT47A7 (ENSG00000228517) #20 CT47A8 (ENSG00000230347) #20 CT47A9 (ENSG00000226600) #20 CT47A10 (ENSG00000224089) #20 CT47A11 (ENSG00000226929) #20 CT47A12 (ENSG00000226685) #20 ENSG00000278646 CT47B1 (ENSG00000236446) #20 C1GALT1C1 (ENSG00000171155) #22 MCTS1 (ENSG00000232119) #23 CUL4B (ENSG00000158290) #24 LAMP2 (ENSG00000005893) #25 ATP1B4 (ENSG00000101892) #26 TMEM255A (ENSG00000125355) #27 ZBTB33 (ENSG00000177485) #28 RHOXF2 (ENSG00000131721) #29 RHOXF1 (ENSG00000101883) RHOXF2B (ENSG00000203989) #29 RHOXF1P3 (ENSG00000282933) NKAP (ENSG00000101882) #30 AKAP14 (ENSG00000186471) #31 NDUFA1 (ENSG00000125356) #32 RNF113A (ENSG00000125352) #33 UPF3B (ENSG00000125351) #34 Human MODERN SPECIES 11 ATP6V1E2 (ENSG00000250565) TMEM247 (ENSG00000284701) EPAS1 (ENSG00000116016) PRKCE (ENSG00000171132) SRBD1 (ENSG00000068784) SIX2 (ENSG00000170577) SIX3 (ENSG00000138083) CAMKMT (ENSG00000143919) PREPL (ENSG00000138078) SLC3A1 (ENSG00000138079) PPM1B (ENSG00000138032) LRPPRC (ENSG00000138095) ABCG8 (ENSG00000143921) ABCG5 (ENSG00000138075) DYNC2LI1 (ENSG00000138036) C1GALT1C1L (ENSG00000223658) #22 PLEKHH2 (ENSG00000152527) THADA (ENSG00000115970) ZFP36L2 (ENSG00000152518) HAAO (ENSG00000162882) OXER1 (ENSG00000162881) MTA3 (ENSG00000057935) KCNG3 (ENSG00000171126) COX7A2L (ENSG00000115944) EML4 (ENSG00000143924) PKDCC (ENSG00000162878) SLC8A1 (ENSG00000183023) THUMPD2 (ENSG00000138050) TMEM178A (ENSG00000152154) MAP4K3 (ENSG00000011566) CDKL4 (ENSG00000205111) Pan ANCESTRAL SPECIES 6 ENSGT00940000161322 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.o ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743.e #13 ENSGT00710000106792 #14 ENSGT00940000161972.d.b ENSGT00940000156123.b #15 ENSGT00910000145076.b #16 ENSGT00910000147946 ENSGT00950000183206.b.c.a.b.a.a.b #18 ENSGT00390000000854.c.b.k.a.a.b #19 ENSGT00390000002253.b.d #20 ENSGT00940000154281.m.b.a.a.b.b #21 ENSGT00940000155145 #22 ENSGT00910000146766 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000164624 #29 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Bonobo MODERN SPECIES 369 DCAF12L1 (ENSPPAG00000025645) ENSPPAG00000041712 #7 TENM1 (ENSPPAG00000017669) #9 SH2D1A (ENSPPAG00000039552) #10 STAG2 (ENSPPAG00000039185) #12 XIAP (ENSPPAG00000028997) #13 THOC2 (ENSPPAG00000040720) #14 ENSPPAG00000029357 GRIA3 (ENSPPAG00000024886) #15 ENSPPAG00000040561 #16 ENSPPAG00000025785 ENSPPAG00000040063 #18 ENSPPAG00000027054 #19 CT47B1 (ENSPPAG00000042339) #20 ENSPPAG00000040640 #21 C1GALT1C1 (ENSPPAG00000022632) #22 MCTS1 (ENSPPAG00000040584) #23 CUL4B (ENSPPAG00000028593) #24 LAMP2 (ENSPPAG00000029091) #25 ATP1B4 (ENSPPAG00000040125) #26 ENSPPAG00000036257 TMEM255A (ENSPPAG00000035961) #27 ZBTB33 (ENSPPAG00000004521) #28 NKAP (ENSPPAG00000030627) #30 AKAP14 (ENSPPAG00000039608) #31 NDUFA1 (ENSPPAG00000027878) #32 RNF113A (ENSPPAG00000009537) #33 UPF3B (ENSPPAG00000040390) #34 ENSPPAG00000042764 ##35 SOWAHD (ENSPPAG00000039065) #36 SEPTIN6 (ENSPPAG00000040865) #37 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 972 TENM1 (ENSPTRG00000022250) #9 SH2D1A (ENSPTRG00000022249) #10 TEX13D (ENSPTRG00000046826) STAG2 (ENSPTRG00000022248) #12 XIAP (ENSPTRG00000022247) #13 THOC2 (ENSPTRG00000022246) #14 ENSPTRG00000050536 GRIA3 (ENSPTRG00000022245) #15 ENSPTRG00000050774 #16 ENSPTRG00000045777 ENSPTRG00000043209 #18 ENSPTRG00000048560 #19 ENSPTRG00000046894 #20 CT47B1 (ENSPTRG00000028209) #20 ENSPTRG00000046124 #21 C1GALT1C1 (ENSPTRG00000022242) #22 ENSPTRG00000030953 MCTS1 (ENSPTRG00000022241) #23 CUL4B (ENSPTRG00000022240) #24 LAMP2 (ENSPTRG00000048329) #25 ATP1B4 (ENSPTRG00000022238) #26 TMEM255A (ENSPTRG00000044206) #27 ZBTB33 (ENSPTRG00000051014) #28 ENSPTRG00000022234 #29 ENSPTRG00000044671 NKAP (ENSPTRG00000022233) #30 AKAP14 (ENSPTRG00000022232) #31 NDUFA1 (ENSPTRG00000022230) #32 RNF113A (ENSPTRG00000022231) #33 UPF3B (ENSPTRG00000022228) #34 ENSPTRG00000047310 #35 Chimpanzee MODERN SPECIES 14 TMEM247 (ENSPTRG00000011892) EPAS1 (ENSPTRG00000011891) PRKCE (ENSPTRG00000011890) SRBD1 (ENSPTRG00000011889) SIX2 (ENSPTRG00000011888) ENSPTRG00000043329 SIX3 (ENSPTRG00000011887) CAMKMT (ENSPTRG00000011886) PREPL (ENSPTRG00000011884) SLC3A1 (ENSPTRG00000011883) PPM1B (ENSPTRG00000011881) LRPPRC (ENSPTRG00000011880) ABCG8 (ENSPTRG00000011879) ABCG5 (ENSPTRG00000011878) DYNC2LI1 (ENSPTRG00000011877) C1GALT1C1L (ENSPTRG00000042938) #22 PLEKHH2 (ENSPTRG00000011874) THADA (ENSPTRG00000011873) ENSPTRG00000051290 ZFP36L2 (ENSPTRG00000051255) ENSPTRG00000049408 HAAO (ENSPTRG00000046058) OXER1 (ENSPTRG00000011868) MTA3 (ENSPTRG00000011867) KCNG3 (ENSPTRG00000011866) COX7A2L (ENSPTRG00000011865) EML4 (ENSPTRG00000011863) PKDCC (ENSPTRG00000011862) LINC02898 (ENSPTRG00000030508) ENSPTRG00000044946 ENSPTRG00000052079 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00940000157675 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00940000154174.s.a.a.b ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a.x.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000153201.j.k.a.a.a.a ENSGT00940000155129.B Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00940000157675 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00940000154174.s.a.a.b ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a.x.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000153201.j.k.a.a.a.a ENSGT00940000155129.B Vervet Monkey MODERN SPECIES 192 PRR32 (ENSCSAG00000018326) ENSCSAG00000019477 ENSCSAG00000018327 TENM1 (ENSCSAG00000018328) #9 SH2D1A (ENSCSAG00000018329) #10 STAG2 (ENSCSAG00000018330) #12 ENSCSAG00000018331 #13 ENSCSAG00000019476 THOC2 (ENSCSAG00000018332) #14 GRIA3 (ENSCSAG00000018334) #15 ENSCSAG00000019475 C1GALT1C1 (ENSCSAG00000019474) #22 MCTS1 (ENSCSAG00000018337) #23 CUL4B (ENSCSAG00000018338) #24 LAMP2 (ENSCSAG00000018339) #25 ATP1B4 (ENSCSAG00000018340) #26 TMEM255A (ENSCSAG00000018341) #27 ZBTB33 (ENSCSAG00000019473) #28 ENSCSAG00000018343 #29 RHOXF1 (ENSCSAG00000018344) NKAP (ENSCSAG00000018345) #30 AKAP14 (ENSCSAG00000018346) #31 ENSCSAG00000019472 ##33 UPF3B (ENSCSAG00000018348) #34 SOWAHD (ENSCSAG00000019471) #36 SEPTIN6 (ENSCSAG00000018351) #37 NKRF (ENSCSAG00000018353) Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00940000157675 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00940000154174.s.a.a.b ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a.x.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000153201.j.k.a.a.a.a ENSGT00940000155129.B Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00940000157675 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00940000154174.s.a.a.b ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a.x.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000153201.j.k.a.a.a.a ENSGT00940000155129.B Olive baboon DUPLICATION Olive baboon MODERN SPECIES 792 ENSPANG00000044681 ENSPANG00000042118 STAG2 (ENSPANG00000013929) #12 ENSPANG00000044057 ENSPANG00000050061 ENSPANG00000041096 THOC2 (ENSPANG00000004038) #14 ENSPANG00000037614 GRIA3 (ENSPANG00000023324) #15 ENSPANG00000043773 ENSPANG00000044422 ENSPANG00000049871 ENSPANG00000046726 ENSPANG00000050218 ENSPANG00000050037 C1GALT1C1 (ENSPANG00000023999) #22 MCTS1 (ENSPANG00000011471) #23 CUL4B (ENSPANG00000000965) #24 ENSPANG00000041141 LAMP2 (ENSPANG00000000964) #25 ATP1B4 (ENSPANG00000011672) #26 TMEM255A (ENSPANG00000007810) #27 ZBTB33 (ENSPANG00000015251) #28 ENSPANG00000019560 #29 RHOXF1 (ENSPANG00000002928) UPF3B (ENSPANG00000000900) #34 NKAP (ENSPANG00000013752) #30 AKAP14 (ENSPANG00000012795) #31 ENSPANG00000029800 #32 ENSPANG00000041770 ENSPANG00000050804 #35 Olive baboon MODERN SPECIES 5 EPAS1 (ENSPANG00000013264) PRKCE (ENSPANG00000050999) SRBD1 (ENSPANG00000008063) SIX2 (ENSPANG00000022339) ENSPANG00000048211 SIX3 (ENSPANG00000006893) CAMKMT (ENSPANG00000015286) PREPL (ENSPANG00000023718) SLC3A1 (ENSPANG00000009101) PPM1B (ENSPANG00000013266) ENSPANG00000041715 LRPPRC (ENSPANG00000020731) ABCG8 (ENSPANG00000018837) ABCG5 (ENSPANG00000020733) DYNC2LI1 (ENSPANG00000010875) C1GALT1C1L (ENSPANG00000033784) #22 PLEKHH2 (ENSPANG00000019544) THADA (ENSPANG00000017546) ZFP36L2 (ENSPANG00000018603) ENSPANG00000045468 ENSPANG00000035015 HAAO (ENSPANG00000010877) OXER1 (ENSPANG00000017325) ENSPANG00000045606 MTA3 (ENSPANG00000006894) ENSPANG00000051046 KCNG3 (ENSPANG00000006928) COX7A2L (ENSPANG00000040980) EML4 (ENSPANG00000007398) ENSPANG00000040557 PKDCC (ENSPANG00000021140) Cercopithecinae_d ANCESTRAL SPECIES 79 ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000157675 ENSGT00940000155145 #22 ENSGT00910000146766 ENSGT01090000260213 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00940000154174.s.a.a.b ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a.x.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000153201.j.k.a.a.a.a Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 283 ENSCATG00000039170 ENSCATG00000040135 ENSCATG00000042821 #21 ENSCATG00000041181 C1GALT1C1 (ENSCATG00000005604) #22 ENSCATG00000003504 ENSCATG00000003464 MCTS1 (ENSCATG00000045065) #23 CUL4B (ENSCATG00000045368) #24 LAMP2 (ENSCATG00000043438) #25 ATP1B4 (ENSCATG00000037392) #26 TMEM255A (ENSCATG00000033659) #27 ENSCATG00000007260 ZBTB33 (ENSCATG00000007286) #28 ENSCATG00000034303 #29 RHOXF1 (ENSCATG00000040256) NKAP (ENSCATG00000030292) #30 AKAP14 (ENSCATG00000031938) #31 NDUFA1 (ENSCATG00000043172) #32 RNF113A (ENSCATG00000002702) #33 Sooty mangabey MODERN SPECIES 257 ABCG5 (ENSCATG00000035547) DYNC2LI1 (ENSCATG00000037015) PLEKHH2 (ENSCATG00000003122) C1GALT1C1L (ENSCATG00000017916) #22 THADA (ENSCATG00000031404) ENSCATG00000041705 ZFP36L2 (ENSCATG00000009833) ENSCATG00000039906 HAAO (ENSCATG00000030259) OXER1 (ENSCATG00000016194) MTA3 (ENSCATG00000032839) KCNG3 (ENSCATG00000013173) ENSCATG00000036383 EML4 (ENSCATG00000042034) PKDCC (ENSCATG00000034401) ENSCATG00000039821 ENSCATG00000006157 SLC8A1 (ENSCATG00000038380) ENSCATG00000022772 Drill DUPLICATION Drill MODERN SPECIES 633 ENSMLEG00000028517 #21 ENSMLEG00000042869 C1GALT1C1 (ENSMLEG00000022788) #22 ENSMLEG00000021949 MCTS1 (ENSMLEG00000040575) #23 CUL4B (ENSMLEG00000029540) #24 LAMP2 (ENSMLEG00000040641) #25 ATP1B4 (ENSMLEG00000033985) #26 TMEM255A (ENSMLEG00000033711) #27 ENSMLEG00000002372 ZBTB33 (ENSMLEG00000027042) #28 ENSMLEG00000040360 #29 RHOXF1 (ENSMLEG00000038427) NKAP (ENSMLEG00000033533) #30 AKAP14 (ENSMLEG00000024368) #31 NDUFA1 (ENSMLEG00000043241) #32 RNF113A (ENSMLEG00000020750) #33 UPF3B (ENSMLEG00000010999) #34 Drill MODERN SPECIES 712 SIX2 (ENSMLEG00000044285) SIX3 (ENSMLEG00000037068) CAMKMT (ENSMLEG00000028955) PREPL (ENSMLEG00000043979) SLC3A1 (ENSMLEG00000034220) PPM1B (ENSMLEG00000028802) LRPPRC (ENSMLEG00000043673) ABCG8 (ENSMLEG00000028413) ABCG5 (ENSMLEG00000041429) DYNC2LI1 (ENSMLEG00000042475) ENSMLEG00000037553 C1GALT1C1L (ENSMLEG00000021515) #22 PLEKHH2 (ENSMLEG00000001696) THADA (ENSMLEG00000028846) ENSMLEG00000031721 ENSMLEG00000028246 HAAO (ENSMLEG00000037812) OXER1 (ENSMLEG00000002728) MTA3 (ENSMLEG00000029684) KCNG3 (ENSMLEG00000011921) ENSMLEG00000041050 EML4 (ENSMLEG00000040432) PKDCC (ENSMLEG00000033391) ENSMLEG00000044369 ENSMLEG00000006428 Macaca ANCESTRAL SPECIES 17 ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000157675 ENSGT00940000155145 #22 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00940000154174.s.a.a.b ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a.x.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000155129.B ENSGT01100000264478 ENSGT00910000147391 Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 419 TENM1 (ENSMNEG00000030864) #9 ENSMNEG00000039683 SH2D1A (ENSMNEG00000035692) #10 ENSMNEG00000034784 STAG2 (ENSMNEG00000033817) #12 ENSMNEG00000031659 XIAP (ENSMNEG00000036769) #13 THOC2 (ENSMNEG00000033627) #14 ENSMNEG00000039323 GRIA3 (ENSMNEG00000032915) #15 ENSMNEG00000028910 ENSMNEG00000042959 #18 ENSMNEG00000038048 #20 ENSMNEG00000022497 #21 ENSMNEG00000040465 C1GALT1C1 (ENSMNEG00000009174) #22 ENSMNEG00000004584 ENSMNEG00000007215 MCTS1 (ENSMNEG00000041580) #23 CUL4B (ENSMNEG00000035305) #24 LAMP2 (ENSMNEG00000034431) #25 ATP1B4 (ENSMNEG00000035619) #26 TMEM255A (ENSMNEG00000029386) #27 ENSMNEG00000005766 ZBTB33 (ENSMNEG00000023409) #28 ENSMNEG00000028727 #29 RHOXF1 (ENSMNEG00000045268) NKAP (ENSMNEG00000045325) #30 AKAP14 (ENSMNEG00000036110) #31 NDUFA1 (ENSMNEG00000037778) #32 RNF113A (ENSMNEG00000019778) #33 Pig-tailed macaque MODERN SPECIES 341 ATP6V1E2 (ENSMNEG00000024749) TMEM247 (ENSMNEG00000039915) EPAS1 (ENSMNEG00000009552) PRKCE (ENSMNEG00000032412) SRBD1 (ENSMNEG00000034701) SIX2 (ENSMNEG00000026299) SIX3 (ENSMNEG00000043772) CAMKMT (ENSMNEG00000039960) PREPL (ENSMNEG00000043494) SLC3A1 (ENSMNEG00000035470) PPM1B (ENSMNEG00000031952) ENSMNEG00000031613 ABCG8 (ENSMNEG00000027676) ABCG5 (ENSMNEG00000035419) DYNC2LI1 (ENSMNEG00000042290) C1GALT1C1L (ENSMNEG00000011982) #22 PLEKHH2 (ENSMNEG00000038378) THADA (ENSMNEG00000024145) ENSMNEG00000032148 ZFP36L2 (ENSMNEG00000034994) ENSMNEG00000009966 ENSMNEG00000029697 HAAO (ENSMNEG00000036194) OXER1 (ENSMNEG00000004690) MTA3 (ENSMNEG00000036239) KCNG3 (ENSMNEG00000029778) ENSMNEG00000023091 EML4 (ENSMNEG00000032246) PKDCC (ENSMNEG00000035822) ENSMNEG00000039909 SLC8A1 (ENSMNEG00000045068) Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT01100000263508.A.d.e.b.a.c.b.c.a.b.a.a.a.b.b ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000157675 ENSGT00940000155145 #22 ENSGT00390000015500 ENSGT00940000161584 ENSGT01100000263539.b.a.a.a.b.b.b.b.a.a.b ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a.x.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00940000155129.B ENSGT00530000063557.b ENSGT00390000015299.a.b.b.b ENSGT00940000155483 ENSGT00940000155423 Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES 175 TEX13D (ENSMFAG00000053656) ENSMFAG00000059701 STAG2 (ENSMFAG00000030658) #12 XIAP (ENSMFAG00000036172) #13 ENSMFAG00000052350 THOC2 (ENSMFAG00000042215) #14 ENSMFAG00000049879 ENSMFAG00000062437 GRIA3 (ENSMFAG00000011695) #15 ENSMFAG00000047513 ENSMFAG00000057566 ENSMFAG00000049948 ENSMFAG00000034503 ENSMFAG00000030042 ENSMFAG00000048426 C1GALT1C1 (ENSMFAG00000002256) #22 MCTS1 (ENSMFAG00000062761) #23 CUL4B (ENSMFAG00000042209) #24 LAMP2 (ENSMFAG00000026553) #25 ATP1B4 (ENSMFAG00000040089) #26 TMEM255A (ENSMFAG00000036306) #27 ZBTB33 (ENSMFAG00000026263) #28 ENSMFAG00000032534 #29 RHOXF1 (ENSMFAG00000037491) ENSMFAG00000056843 NKAP (ENSMFAG00000003304) #30 AKAP14 (ENSMFAG00000000582) #31 NDUFA1 (ENSMFAG00000039738) #32 RNF113A (ENSMFAG00000018472) #33 ENSMFAG00000054522 UPF3B (ENSMFAG00000045414) #34 Crab-eating macaque MODERN SPECIES 4 PRKCE (ENSMFAG00000003236) SRBD1 (ENSMFAG00000042026) SIX2 (ENSMFAG00000056852) SIX3 (ENSMFAG00000059333) ENSMFAG00000058478 CAMKMT (ENSMFAG00000003584) PREPL (ENSMFAG00000038619) SLC3A1 (ENSMFAG00000030088) PPM1B (ENSMFAG00000000709) ENSMFAG00000057111 ENSMFAG00000058293 LRPPRC (ENSMFAG00000041560) ABCG8 (ENSMFAG00000045442) ABCG5 (ENSMFAG00000003442) PLEKHH2 (ENSMFAG00000037120) C1GALT1C1L (ENSMFAG00000030612) #22 THADA (ENSMFAG00000015722) ENSMFAG00000051345 ENSMFAG00000063384 ENSMFAG00000056498 ENSMFAG00000060086 HAAO (ENSMFAG00000000346) OXER1 (ENSMFAG00000030424) MTA3 (ENSMFAG00000037713) KCNG3 (ENSMFAG00000060305) ENSMFAG00000042918 EML4 (ENSMFAG00000043115) PKDCC (ENSMFAG00000003585) SLC8A1 (ENSMFAG00000038538) ENSMFAG00000050901 THUMPD2 (ENSMFAG00000031464) Rhesus DUPLICATION Rhesus MODERN SPECIES 327 ENSMMUG00000054428 ENSMMUG00000018157 ENSMMUG00000055293 TENM1 (ENSMMUG00000007587) #9 SH2D1A (ENSMMUG00000007585) #10 TEX13D (ENSMMUG00000039318) STAG2 (ENSMMUG00000043585) #12 XIAP (ENSMMUG00000032353) #13 ENSMMUG00000053223 THOC2 (ENSMMUG00000003745) #14 ENSMMUG00000063143 GRIA3 (ENSMMUG00000009054) #15 ENSMMUG00000019021 ENSMMUG00000012619 #20 ENSMMUG00000061723 #20 C1GALT1C1 (ENSMMUG00000023574) #22 MCTS1 (ENSMMUG00000009043) #23 CUL4B (ENSMMUG00000009037) #24 LAMP2 (ENSMMUG00000001484) #25 ATP1B4 (ENSMMUG00000000705) #26 TMEM255A (ENSMMUG00000011074) #27 ZBTB33 (ENSMMUG00000011076) #28 ENSMMUG00000032357 #29 RHOXF1 (ENSMMUG00000063924) ENSMMUG00000054048 NKAP (ENSMMUG00000012382) #30 AKAP14 (ENSMMUG00000012384) #31 NDUFA1 (ENSMMUG00000032359) #32 RNF113A (ENSMMUG00000020223) #33 UPF3B (ENSMMUG00000020222) #34 RPL39 (ENSMMUG00000018391) #35 Rhesus MODERN SPECIES 4 PRKCE (ENSMMUG00000014425) SRBD1 (ENSMMUG00000003490) SIX2 (ENSMMUG00000023752) ENSMMUG00000053683 SIX3 (ENSMMUG00000014824) ENSMMUG00000061283 CAMKMT (ENSMMUG00000006312) PREPL (ENSMMUG00000006311) SLC3A1 (ENSMMUG00000006310) PPM1B (ENSMMUG00000022261) LRPPRC (ENSMMUG00000019841) ABCG8 (ENSMMUG00000008081) ABCG5 (ENSMMUG00000008080) DYNC2LI1 (ENSMMUG00000008077) PLEKHH2 (ENSMMUG00000008074) C1GALT1C1L (ENSMMUG00000008076) #22 THADA (ENSMMUG00000000642) ZFP36L2 (ENSMMUG00000059805) ENSMMUG00000051204 HAAO (ENSMMUG00000064735) OXER1 (ENSMMUG00000063947) MTA3 (ENSMMUG00000020744) ENSMMUG00000056008 KCNG3 (ENSMMUG00000054310) ENSMMUG00000016278 EML4 (ENSMMUG00000016277) ENSMMUG00000049887 PKDCC (ENSMMUG00000020074) ENSMMUG00000039535 ENSMMUG00000064710 SLC8A1 (ENSMMUG00000015508) Rhinopithecus ANCESTRAL SPECIES 700 ENSGT00940000155145 #22 ENSGT00910000146766 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 657 ENSRBIG00000042472 ENSRBIG00000021714 C1GALT1C1 (ENSRBIG00000032385) #22 ENSRBIG00000029197 MCTS1 (ENSRBIG00000035074) #23 Black snub-nosed monkey MODERN SPECIES 2342 EPAS1 (ENSRBIG00000032880) PRKCE (ENSRBIG00000043807) SRBD1 (ENSRBIG00000033486) SIX2 (ENSRBIG00000041429) SIX3 (ENSRBIG00000031093) CAMKMT (ENSRBIG00000031044) PREPL (ENSRBIG00000030291) SLC3A1 (ENSRBIG00000032035) PPM1B (ENSRBIG00000037090) ENSRBIG00000036556 LRPPRC (ENSRBIG00000031552) ABCG8 (ENSRBIG00000024223) ABCG5 (ENSRBIG00000039579) DYNC2LI1 (ENSRBIG00000031972) ENSRBIG00000041164 C1GALT1C1L (ENSRBIG00000006561) #22 PLEKHH2 (ENSRBIG00000035745) THADA (ENSRBIG00000028134) ENSRBIG00000035265 ZFP36L2 (ENSRBIG00000026428) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2954 C1GALT1C1 (ENSRROG00000038320) #22 ENSRROG00000027559 MCTS1 (ENSRROG00000039816) #23 CUL4B (ENSRROG00000030442) #24 LAMP2 (ENSRROG00000033662) #25 Golden snub-nosed monkey MODERN SPECIES 2364 ENSRROG00000038362 ABCG8 (ENSRROG00000044948) ABCG5 (ENSRROG00000007083) DYNC2LI1 (ENSRROG00000035991) PLEKHH2 (ENSRROG00000028145) C1GALT1C1L (ENSRROG00000001956) #22 THADA (ENSRROG00000032889) ZFP36L2 (ENSRROG00000042023) ENSRROG00000031800 ENSRROG00000028921 HAAO (ENSRROG00000027460) OXER1 (ENSRROG00000014833) MTA3 (ENSRROG00000034112) ENSRROG00000026437 KCNG3 (ENSRROG00000012127) COX7A2L (ENSRROG00000029799) EML4 (ENSRROG00000036308) PKDCC (ENSRROG00000041800) Platyrrhini ANCESTRAL SPECIES 41 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000163379.b ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161768.A.p ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00390000006051.a.b.a.b.o.a ENSGT00950000182805.a.a.a.b.i.a ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253.b #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00390000006696.ub.b ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.`b #32 ENSGT00390000016292.g.a.c #33 ENSGT00390000017146.a.n #34 ENSGT00390000014814.b.eb #35 ENSGT00940000158026 #37 Mas night monkey MODERN SPECIES 928 TENM1 (ENSANAG00000034279) #9 SH2D1A (ENSANAG00000017592) #10 ENSANAG00000024609 ENSANAG00000021441 STAG2 (ENSANAG00000031862) #12 XIAP (ENSANAG00000025926) #13 ENSANAG00000004172 ENSANAG00000034037 #14 GRIA3 (ENSANAG00000038407) #15 ENSANAG00000036624 ENSANAG00000022752 ENSANAG00000024009 ##21 C1GALT1C1 (ENSANAG00000019504) #22 ENSANAG00000033714 #23 CUL4B (ENSANAG00000037771) #24 LAMP2 (ENSANAG00000022316) #25 ATP1B4 (ENSANAG00000021106) #26 ENSANAG00000020725 TMEM255A (ENSANAG00000028022) #27 ZBTB33 (ENSANAG00000018611) #28 RHOXF1 (ENSANAG00000037677) NKAP (ENSANAG00000038130) #30 AKAP14 (ENSANAG00000035034) #31 NDUFA1 (ENSANAG00000031312) #32 ENSANAG00000024332 #33 ENSANAG00000021894 #34 ENSANAG00000034443 ENSANAG00000033543 ##35 Cebidae ANCESTRAL SPECIES 27 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000163379.b ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161768.A.p ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00390000006051.a.b.a.b.o.a ENSGT00950000182805.a.a.a.b.i.a ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253.b #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00390000006696.ub.b ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000164624 #29 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.`b.a.b #32 ENSGT00390000017146.a.m.a #34 ENSGT00390000014814.a.b.a.b.b ##35 ENSGT00390000007560.`b.b #32 ENSGT00390000016292.g.a.c #33 Cebidae_a ANCESTRAL SPECIES 67 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000163379.b ENSGT00390000012726 ENSGT00940000161768.A.p ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00390000006051.a.b.a.b.o.a ENSGT00950000182805.a.a.a.b.i.a ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253.b #20 ENSGT00940000154281.m.a.d ##21 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00390000006696.ub.b ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.`b.a.b #32 ENSGT00390000016292.g.a.c #33 ENSGT00390000017146.a.n #34 ENSGT00390000014814.b.eb #35 ENSGT00940000158026 #37 Bolivian squirrel monkey MODERN SPECIES 85 SMARCA1 (ENSSBOG00000020641) ENSSBOG00000035106 ENSSBOG00000020087 PRR32 (ENSSBOG00000019883) ENSSBOG00000033887 TENM1 (ENSSBOG00000031696) #9 SH2D1A (ENSSBOG00000031200) #10 ENSSBOG00000019115 ENSSBOG00000021911 STAG2 (ENSSBOG00000030175) #12 XIAP (ENSSBOG00000032822) #13 THOC2 (ENSSBOG00000007245) #14 GRIA3 (ENSSBOG00000025046) #15 ENSSBOG00000029995 #20 ENSSBOG00000035248 ##21 C1GALT1C1 (ENSSBOG00000019221) #22 MCTS1 (ENSSBOG00000031550) #23 CUL4B (ENSSBOG00000029478) #24 LAMP2 (ENSSBOG00000034449) #25 ATP1B4 (ENSSBOG00000033763) #26 TMEM255A (ENSSBOG00000014597) #27 ZBTB33 (ENSSBOG00000006501) #28 ENSSBOG00000023048 #29 ENSSBOG00000019000 RHOXF1 (ENSSBOG00000035324) NKAP (ENSSBOG00000025492) #30 AKAP14 (ENSSBOG00000035335) #31 NDUFA1 (ENSSBOG00000035375) #32 RNF113A (ENSSBOG00000017704) #33 UPF3B (ENSSBOG00000019740) #34 ENSSBOG00000019969 ##35 Capuchin MODERN SPECIES 578 ENSCCAG00000022720 ENSCCAG00000023240 #20 ENSCCAG00000035026 ##21 C1GALT1C1 (ENSCCAG00000009436) #22 ENSCCAG00000024478 #23 CUL4B (ENSCCAG00000022241) #24 LAMP2 (ENSCCAG00000024039) #25 ATP1B4 (ENSCCAG00000029879) #26 ENSCCAG00000026697 TMEM255A (ENSCCAG00000026203) #27 Marmoset DUPLICATION Marmoset MODERN SPECIES 78 ENSCJAG00000085274 ENSCJAG00000087225 PRR32 (ENSCJAG00000002938) TEX13C (ENSCJAG00000040019) TENM1 (ENSCJAG00000020589) #9 SH2D1A (ENSCJAG00000077252) #10 STAG2 (ENSCJAG00000020559) #12 XIAP (ENSCJAG00000020553) #13 ENSCJAG00000016157 #14 GRIA3 (ENSCJAG00000016110) #15 ENSCJAG00000054890 ENSCJAG00000086896 ENSCJAG00000075024 ENSCJAG00000056596 ENSCJAG00000078239 #20 C1GALT1C1 (ENSCJAG00000002590) #22 MCTS1 (ENSCJAG00000002593) #23 CUL4B (ENSCJAG00000002596) #24 LAMP2 (ENSCJAG00000002638) #25 ATP1B4 (ENSCJAG00000014233) #26 TMEM255A (ENSCJAG00000085725) #27 ZBTB33 (ENSCJAG00000076101) #28 ENSCJAG00000083966 ENSCJAG00000004920 #29 NKAP (ENSCJAG00000004941) #30 AKAP14 (ENSCJAG00000004955) #31 ENSCJAG00000077125 #32 UPF3B (ENSCJAG00000004975) #34 ENSCJAG00000080781 RPL39 (ENSCJAG00000084467) #35 ENSCJAG00000081104 Marmoset MODERN SPECIES 5 PRKCE (ENSCJAG00000000724) SRBD1 (ENSCJAG00000000727) ENSCJAG00000071312 SIX2 (ENSCJAG00000039065) SIX3 (ENSCJAG00000000736) CAMKMT (ENSCJAG00000000749) PREPL (ENSCJAG00000000754) SLC3A1 (ENSCJAG00000000766) ENSCJAG00000080387 PPM1B (ENSCJAG00000000781) LRPPRC (ENSCJAG00000000794) ABCG8 (ENSCJAG00000000833) ABCG5 (ENSCJAG00000000847) DYNC2LI1 (ENSCJAG00000000860) PLEKHH2 (ENSCJAG00000014373) C1GALT1C1L (ENSCJAG00000054433) #22 THADA (ENSCJAG00000014464) ZFP36L2 (ENSCJAG00000014571) HAAO (ENSCJAG00000014593) OXER1 (ENSCJAG00000014607) MTA3 (ENSCJAG00000014614) ENSCJAG00000044469 KCNG3 (ENSCJAG00000014695) COX7A2L (ENSCJAG00000061936) EML4 (ENSCJAG00000014719) ENSCJAG00000072265 PKDCC (ENSCJAG00000014835) ENSCJAG00000076545 SLC8A1 (ENSCJAG00000023118) THUMPD2 (ENSCJAG00000014891) TMEM178A (ENSCJAG00000040463) Tarsier DUPLICATION Tarsier DUPLICATION Tarsier MODERN SPECIES 7015 C1GALT1C1 (ENSTSYG00000001441) #22 MCTS1 (ENSTSYG00000001440) #23 ENSTSYG00000027569 CUL4B (ENSTSYG00000002338) #24 LAMP2 (ENSTSYG00000012618) #25 ATP1B4 (ENSTSYG00000011536) #26 ENSTSYG00000036840 TMEM255A (ENSTSYG00000000246) #27 ZBTB33 (ENSTSYG00000000245) #28 Tarsier MODERN SPECIES 7228 SAMD5 (ENSTSYG00000031130) ENSTSYG00000027290 #22 STXBP5 (ENSTSYG00000005009) ADGB (ENSTSYG00000002644) RAB32 (ENSTSYG00000002238) Tarsier MODERN SPECIES 6401 ENSTSYG00000031620 #22 PLEKHH2 (ENSTSYG00000013192) DNAJC22 (ENSTSYG00000028012) Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00960000190005 ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000155129.B ENSGT00530000063557.b Lemuriformes ANCESTRAL SPECIES 23 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00960000190005 ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000155129.B ENSGT00530000063557.b Mouse lemur MODERN SPECIES 169 GYG2 (ENSMICG00000015522) XG (ENSMICG00000047361) ENSMICG00000043785 ENSMICG00000041903 ASMT (ENSMICG00000042754) AKAP17A (ENSMICG00000027823) P2RY8 (ENSMICG00000047835) ASMTL (ENSMICG00000044509) SLC25A6 (ENSMICG00000002757) IL3RA (ENSMICG00000043246) CSF2RA (ENSMICG00000029544) CRLF2 (ENSMICG00000033434) ENSMICG00000046341 ENSMICG00000042569 ENSMICG00000043354 C1GALT1C1 (ENSMICG00000044155) #22 ENSMICG00000014551 #23 CUL4B (ENSMICG00000014517) #24 LAMP2 (ENSMICG00000042413) #25 ATP1B4 (ENSMICG00000029966) #26 TMEM255A (ENSMICG00000014354) #27 ENSMICG00000043048 #28 ENSMICG00000033925 ENSMICG00000036738 ##35 ENSMICG00000004258 UPF3B (ENSMICG00000001743) #34 ENSMICG00000001750 #33 ENSMICG00000044125 #32 ENSMICG00000043830 #31 NKAP (ENSMICG00000013599) #30 ENSMICG00000002769 #37 Lemuriformes_a ANCESTRAL SPECIES 10 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00960000190005 ENSGT00940000158434 ENSGT00390000001205.a ENSGT00410000029194 ENSGT00940000155129.B ENSGT00530000063557.b Coquerels sifaka MODERN SPECIES 916 C1GALT1C1 (ENSPCOG00000000562) #22 MCTS1 (ENSPCOG00000020584) #23 CUL4B (ENSPCOG00000018791) #24 ENSPCOG00000026008 LAMP2 (ENSPCOG00000010870) #25 ATP1B4 (ENSPCOG00000024188) #26 TMEM255A (ENSPCOG00000017273) #27 ZBTB33 (ENSPCOG00000012946) #28 ENSPCOG00000023827 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 793 ENSPSMG00000012292 C1GALT1C1 (ENSPSMG00000012287) #22 ENSPSMG00000012280 #23 CUL4B (ENSPSMG00000012225) #24 Greater bamboo lemur MODERN SPECIES 928 TMEM247 (ENSPSMG00000008968) EPAS1 (ENSPSMG00000008957) PRKCE (ENSPSMG00000008894) ENSPSMG00000008850 SRBD1 (ENSPSMG00000008842) SIX2 (ENSPSMG00000008821) SIX3 (ENSPSMG00000008814) CAMKMT (ENSPSMG00000008779) PREPL (ENSPSMG00000008664) SLC3A1 (ENSPSMG00000008424) PPM1B (ENSPSMG00000008363) LRPPRC (ENSPSMG00000008019) ABCG8 (ENSPSMG00000007486) ABCG5 (ENSPSMG00000007454) DYNC2LI1 (ENSPSMG00000007408) C1GALT1C1L (ENSPSMG00000007362) #22 PLEKHH2 (ENSPSMG00000007353) THADA (ENSPSMG00000007072) ZFP36L2 (ENSPSMG00000006914) HAAO (ENSPSMG00000006899) MTA3 (ENSPSMG00000006820) KCNG3 (ENSPSMG00000006730) COX7A2L (ENSPSMG00000006718) ENSPSMG00000006708 ENSPSMG00000006704 #35 EML4 (ENSPSMG00000006563) PKDCC (ENSPSMG00000006497) ENSPSMG00000006489 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 225 ENSOGAG00000033256 THOC2 (ENSOGAG00000000302) #14 ENSOGAG00000010200 #15 ENSOGAG00000025221 ENSOGAG00000029704 ENSOGAG00000027740 ENSOGAG00000034886 ENSOGAG00000031028 ENSOGAG00000032514 ENSOGAG00000030939 #20 ENSOGAG00000024493 C1GALT1C1 (ENSOGAG00000001484) #22 CUL4B (ENSOGAG00000001282) #24 ENSOGAG00000027107 LAMP2 (ENSOGAG00000009759) #25 ATP1B4 (ENSOGAG00000034282) #26 TMEM255A (ENSOGAG00000002264) #27 ZBTB33 (ENSOGAG00000025242) #28 ENSOGAG00000030942 ENSOGAG00000030871 ENSOGAG00000025772 NKAP (ENSOGAG00000001004) #30 ENSOGAG00000031602 #33 ENSOGAG00000004643 #34 SOWAHD (ENSOGAG00000032326) #36 SEPTIN6 (ENSOGAG00000009707) #37 NKRF (ENSOGAG00000009703) Bushbaby MODERN SPECIES 139 EPAS1 (ENSOGAG00000008084) PRKCE (ENSOGAG00000008081) ENSOGAG00000029209 ENSOGAG00000026831 SRBD1 (ENSOGAG00000001076) SIX2 (ENSOGAG00000034436) SIX3 (ENSOGAG00000025984) PREPL (ENSOGAG00000008772) SLC3A1 (ENSOGAG00000028039) PPM1B (ENSOGAG00000002613) ENSOGAG00000012798 ABCG8 (ENSOGAG00000012795) ABCG5 (ENSOGAG00000012791) DYNC2LI1 (ENSOGAG00000012787) ENSOGAG00000029378 C1GALT1C1L (ENSOGAG00000026191) #22 PLEKHH2 (ENSOGAG00000004623) THADA (ENSOGAG00000013182) ZFP36L2 (ENSOGAG00000028804) HAAO (ENSOGAG00000005370) MTA3 (ENSOGAG00000005363) KCNG3 (ENSOGAG00000031627) ENSOGAG00000016029 EML4 (ENSOGAG00000016021) PKDCC (ENSOGAG00000003485) Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000163297.c.b ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 Glires ANCESTRAL SPECIES 10 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000163297.c.b ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a #33 ENSGT00390000017146.a #34 Rodentia ANCESTRAL SPECIES 10 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a.a #33 ENSGT00390000017146.a #34 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.g.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b.s #35 ENSGT00950000183003.a.a.a.b #36 Sciuridae ANCESTRAL SPECIES 27 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00530000063539.b.m.a ENSGT01030000234566.e.b.b.b #9 ENSGT01010000230270 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00950000184857 ENSGT00390000007560 #32 ENSGT00390000016292.g.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b.s #35 ENSGT00390000014814.a.b.a.a.b ##35 Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005010665 ENSSVLG00005010704 ENSSVLG00005010745 ENSSVLG00005010791 TENM1 (ENSSVLG00005010977) #9 ENSSVLG00005011684 SH2D1A (ENSSVLG00005011708) #10 STAG2 (ENSSVLG00005011895) #12 XIAP (ENSSVLG00005011965) #13 ENSSVLG00005012039 THOC2 (ENSSVLG00005012119) #14 GRIA3 (ENSSVLG00005012602) #15 ENSSVLG00005013039 ENSSVLG00005013100 ENSSVLG00005013222 ENSSVLG00005013289 #22 MCTS1 (ENSSVLG00005013371) #23 ENSSVLG00005013703 #24 ENSSVLG00005013800 LAMP2 (ENSSVLG00005013943) #25 ENSSVLG00005014061 ATP1B4 (ENSSVLG00005014140) #26 TMEM255A (ENSSVLG00005014430) #27 ZBTB33 (ENSSVLG00005014593) #28 ENSSVLG00005014617 ENSSVLG00005014664 NKAP (ENSSVLG00005014692) #30 ENSSVLG00005014730 ENSSVLG00005014769 ENSSVLG00005014815 NDUFA1 (ENSSVLG00005014840) #32 Eurasian red squirrel MODERN SPECIES 14 TMTC2 (ENSSVLG00005002395) SLC6A15 (ENSSVLG00005002476) TSPAN19 (ENSSVLG00005002560) LRRIQ1 (ENSSVLG00005002609) ALX1 (ENSSVLG00005002747) RASSF9 (ENSSVLG00005002780) NTS (ENSSVLG00005002800) MGAT4C (ENSSVLG00005002827) ENSSVLG00005002860 ENSSVLG00005002878 C12orf50 (ENSSVLG00005002902) ENSSVLG00005002975 CEP290 (ENSSVLG00005003075) TMTC3 (ENSSVLG00005003348) KITLG (ENSSVLG00005003404) ENSSVLG00005003526 #22 DUSP6 (ENSSVLG00005003537) POC1B (ENSSVLG00005003557) ATP2B1 (ENSSVLG00005003665) ENSSVLG00005003775 CCER1 (ENSSVLG00005003787) EPYC (ENSSVLG00005003799) KERA (ENSSVLG00005003814) LUM (ENSSVLG00005003829) DCN (ENSSVLG00005003889) BTG1 (ENSSVLG00005003939) ENSSVLG00005003961 ENSSVLG00005003978 EEA1 (ENSSVLG00005004013) ENSSVLG00005004057 ENSSVLG00005004071 Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005017998 MRPL48 (ENSSVLG00005018070) COA4 (ENSSVLG00005018170) PAAF1 (ENSSVLG00005018212) DNAJB13 (ENSSVLG00005018360) UCP2 (ENSSVLG00005018525) UCP3 (ENSSVLG00005018661) C2CD3 (ENSSVLG00005018889) ENSSVLG00005019484 PPME1 (ENSSVLG00005019535) P4HA3 (ENSSVLG00005019682) PGM2L1 (ENSSVLG00005019813) ENSSVLG00005019955 KCNE3 (ENSSVLG00005019987) LIPT2 (ENSSVLG00005020012) ENSSVLG00005020056 #22 ENSSVLG00005020086 ENSSVLG00005020230 ENSSVLG00005020246 ENSSVLG00005020262 CHRDL2 (ENSSVLG00005020306) ENSSVLG00005020360 XRRA1 (ENSSVLG00005020739) ENSSVLG00005021124 ENSSVLG00005021188 ENSSVLG00005021281 OR2AT4 (ENSSVLG00005021320) SLCO2B1 (ENSSVLG00005021400) TPBGL (ENSSVLG00005021827) ENSSVLG00005021867 ENSSVLG00005022121 Marmotini ANCESTRAL SPECIES 63 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00960000187913 ENSGT00530000063539.b.m.a ENSGT01030000234566.e.b.b.b #9 ENSGT01010000230270 ENSGT00940000155920 #10 ENSGT00940000161768.A ENSGT00390000012691.c.b.p ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00950000184857 ENSGT00390000007560 #32 ENSGT00390000016292.g.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b.s #35 ENSGT00390000014814.a.b.a.a.b ##35 Marmotini_b ANCESTRAL SPECIES 78 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.v ENSGT00940000161322.u ENSGT00960000187913 ENSGT00530000063539.b.m.a ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A ENSGT00390000012691.c.b.p ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000016292.g.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a.b ##35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 Squirrel MODERN SPECIES 79 APLN (ENSSTOG00000034051) OCRL (ENSSTOG00000016123) SMARCA1 (ENSSTOG00000014524) ACTRT1 (ENSSTOG00000023127) PRR32 (ENSSTOG00000008662) ENSSTOG00000029777 ENSSTOG00000026965 ENSSTOG00000019526 TENM1 (ENSSTOG00000000440) #9 SH2D1A (ENSSTOG00000014003) #10 ENSSTOG00000032767 STAG2 (ENSSTOG00000008577) #12 XIAP (ENSSTOG00000003521) #13 THOC2 (ENSSTOG00000009134) #14 GRIA3 (ENSSTOG00000009114) #15 C1GALT1C1 (ENSSTOG00000011499) #22 ENSSTOG00000011496 #23 CUL4B (ENSSTOG00000009208) #24 LAMP2 (ENSSTOG00000021626) #25 ENSSTOG00000020706 ATP1B4 (ENSSTOG00000002312) #26 TMEM255A (ENSSTOG00000002306) #27 ZBTB33 (ENSSTOG00000002304) #28 ENSSTOG00000021587 NKAP (ENSSTOG00000001134) #30 NDUFA1 (ENSSTOG00000020047) #32 RNF113A (ENSSTOG00000019866) #33 UPF3B (ENSSTOG00000001101) #34 ENSSTOG00000030492 SEPTIN6 (ENSSTOG00000011593) #37 NKRF (ENSSTOG00000020483) Alpin marmot MODERN SPECIES 54 PRR32 (ENSMMMG00000005535) ENSMMMG00000005544 ENSMMMG00000005575 ENSMMMG00000005584 ENSMMMG00000005597 TENM1 (ENSMMMG00000005615) #9 ENSMMMG00000005790 SH2D1A (ENSMMMG00000005794) #10 ENSMMMG00000005838 STAG2 (ENSMMMG00000005858) #12 ENSMMMG00000006273 XIAP (ENSMMMG00000006282) #13 THOC2 (ENSMMMG00000006302) #14 GRIA3 (ENSMMMG00000006362) #15 ENSMMMG00000006455 C1GALT1C1 (ENSMMMG00000006481) #22 MCTS1 (ENSMMMG00000006488) #23 CUL4B (ENSMMMG00000006513) #24 LAMP2 (ENSMMMG00000006559) #25 ATP1B4 (ENSMMMG00000006573) #26 TMEM255A (ENSMMMG00000006602) #27 ENSMMMG00000006640 ZBTB33 (ENSMMMG00000006644) #28 ENSMMMG00000006648 ENSMMMG00000006651 NKAP (ENSMMMG00000006657) #30 ENSMMMG00000006667 NDUFA1 (ENSMMMG00000006672) #32 RNF113A (ENSMMMG00000006679) #33 UPF3B (ENSMMMG00000006683) #34 ENSMMMG00000006713 #35 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00940000160566 ENSGT00940000157198 ENSGT00940000158738 ENSGT00390000016168.b ENSGT01070000253766.B ENSGT00390000013253 ENSGT00940000159879 ENSGT00940000162011 ENSGT00940000162811 ENSGT00940000161489 ENSGT00390000009842 ENSGT01090000260003.a.b.b.a.a.b.b.a ENSGT00910000146888 ENSGT00390000002407.c ENSGT00940000161109 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00940000156478 ENSGT00940000160613 ENSGT00530000064308 ENSGT00940000162385 ENSGT00940000163582 ENSGT00510000050451 ENSGT00390000001502 ENSGT00390000000604 ENSGT00530000064502 ENSGT00530000064329 ENSGT00390000003339 ENSGT00530000063983.A.b ENSGT00940000163140 Hystricomorpha_a ANCESTRAL SPECIES 71 ENSGT00390000008142.m ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00940000161322 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 Hystricomorpha_b ANCESTRAL SPECIES 134 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 Long-tailed chinchilla MODERN SPECIES 279 C1GALT1C1 (ENSCLAG00000001782) #22 MCTS1 (ENSCLAG00000000154) #23 ENSCLAG00000000183 #24 LAMP2 (ENSCLAG00000000358) #25 ATP1B4 (ENSCLAG00000000421) #26 TMEM255A (ENSCLAG00000000514) #27 ZBTB33 (ENSCLAG00000000642) #28 Degu MODERN SPECIES 360 C1GALT1C1 (ENSODEG00000018585) #22 ENSODEG00000000920 #23 CUL4B (ENSODEG00000000736) #24 LAMP2 (ENSODEG00000000917) #25 ATP1B4 (ENSODEG00000001168) #26 TMEM255A (ENSODEG00000000349) #27 ZBTB33 (ENSODEG00000000429) #28 Guinea pig MODERN SPECIES 69 ACTRT1 (ENSCPOG00000023750) DCAF12L2 (ENSCPOG00000027086) TENM1 (ENSCPOG00000005914) #9 SH2D1A (ENSCPOG00000039929) #10 ENSCPOG00000003621 STAG2 (ENSCPOG00000039493) #12 XIAP (ENSCPOG00000006316) #13 THOC2 (ENSCPOG00000038670) #14 GRIA3 (ENSCPOG00000003559) #15 ENSCPOG00000020749 C1GALT1C1 (ENSCPOG00000020397) #22 MCTS1 (ENSCPOG00000005502) #23 CUL4B (ENSCPOG00000003522) #24 LAMP2 (ENSCPOG00000012996) #25 ATP1B4 (ENSCPOG00000038623) #26 TMEM255A (ENSCPOG00000001714) #27 ZBTB33 (ENSCPOG00000036142) #28 Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000033450 #32 ENSHGLG00000039528 #31 ENSHGLG00000032810 #30 ENSHGLG00000040898 ENSHGLG00000039888 ENSHGLG00000049926 ENSHGLG00000032932 ZBTB33 (ENSHGLG00000000484) #28 TMEM255A (ENSHGLG00000000612) #27 ENSHGLG00000036791 ATP1B4 (ENSHGLG00000048642) #26 ENSHGLG00000049851 #25 ENSHGLG00000000828 #24 ENSHGLG00000000956 #23 ENSHGLG00000035625 ENSHGLG00000000073 #22 ENSHGLG00000032972 ENSHGLG00000000099 ENSHGLG00000049618 ENSHGLG00000035272 ENSHGLG00000039468 ENSHGLG00000035517 ENSHGLG00000020492 ENSHGLG00000002840 ENSHGLG00000003217 #15 ENSHGLG00000048745 ENSHGLG00000003480 ENSHGLG00000020259 ENSHGLG00000004222 #14 ENSHGLG00000049745 ENSHGLG00000038827 Rodentia_B ANCESTRAL SPECIES 16 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00390000016292.g.a.a #33 ENSGT00390000007560 #32 ENSGT00390000003444 #31 ENSGT00940000160787 #30 ENSGT00390000016292.g.b ##33 ENSGT00390000017146.a #34 Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00390000016292.g.a.a #33 ENSGT00390000007560 #32 ENSGT00390000003444 #31 ENSGT00940000160787 #30 ENSGT00390000016292.g.b ##33 ENSGT00390000017146.a #34 Muroidea ANCESTRAL SPECIES 13 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00390000016292.g.a.a #33 ENSGT00390000007560 #32 ENSGT00390000003444 #31 ENSGT00940000160787 #30 ENSGT00390000017146.a #34 ENSGT00390000014814.b.s #35 Muroidea_A DUPLICATION Muroidea_A ANCESTRAL SPECIES 7 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00940000166354 ENSGT00940000154287.a.h ENSGT00950000182952.C.xc.b ENSGT01050000245028.C ENSGT01050000245028.A ENSGT00520000058743 Cricetidae ANCESTRAL SPECIES 8 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00920000149445.a ENSGT00940000166354.a ENSGT00940000154287.a.h ENSGT00950000182952.C.xc.b ENSGT01050000245028.C ENSGT01050000245028.A ENSGT00520000058743 ENSGT00390000016292.g.a.a #33 Cricetinae ANCESTRAL SPECIES 29 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00920000149445.a ENSGT00940000166354.a ENSGT00940000154287.a.h ENSGT00950000182952.C.xc.b ENSGT01050000245028.C ENSGT01050000245028.A ENSGT00390000016292.g.a.a #33 ENSGT00390000007560 #32 Golden Hamster MODERN SPECIES 761 C1galt1c1 (ENSMAUG00000015715) #22 Mcts1 (ENSMAUG00000000385) #23 Cul4b (ENSMAUG00000002566) #24 Lamp2 (ENSMAUG00000016372) #25 Tex13c3 (ENSMAUG00000001959) Atp1b4 (ENSMAUG00000016959) #26 Tmem255a (ENSMAUG00000007801) #27 Zbtb33 (ENSMAUG00000008177) #28 Rhox12 (ENSMAUG00000012331) ENSMAUG00000009678 Rhox10 (ENSMAUG00000017260) ENSMAUG00000002213 ENSMAUG00000004552 ENSMAUG00000016012 Ndufa1 (ENSMAUG00000000368) #32 Akap14 (ENSMAUG00000014839) #31 Chinese hamster chok1gshd MODERN SPECIES 16 Prr32 (ENSCGRG00001015711) Dcaf12l1 (ENSCGRG00001018908) ENSCGRG00001004377 Dcaf12l2 (ENSCGRG00001009053) Tex13c1 (ENSCGRG00001009417) Tenm1 (ENSCGRG00001015057) #9 Sh2d1a (ENSCGRG00001011023) #10 Tex13d (ENSCGRG00001020574) Stag2 (ENSCGRG00001008159) #12 Xiap (ENSCGRG00001013410) #13 Thoc2 (ENSCGRG00001015509) #14 ENSCGRG00001008147 Gria3 (ENSCGRG00001010277) #15 ENSCGRG00001000441 6030498E09Rik (ENSCGRG00001016358) C1galt1c1 (ENSCGRG00001004167) #22 Mcts1 (ENSCGRG00001022838) #23 ENSCGRG00001000813 #24 Lamp2 (ENSCGRG00001023305) #25 Tex13c3 (ENSCGRG00001016863) Atp1b4 (ENSCGRG00001004737) #26 Tmem255a (ENSCGRG00001007359) #27 Zbtb33 (ENSCGRG00001007690) #28 Rhox12 (ENSCGRG00001000074) ENSCGRG00001007488 ENSCGRG00001014368 ENSCGRG00001017971 ENSCGRG00001000411 ENSCGRG00001019766 ENSCGRG00001009719 ENSCGRG00001016724 Cricetidae_B ANCESTRAL SPECIES 28 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00920000149445.a ENSGT00940000154287.a.g.b ENSGT00940000166354.b ENSGT00950000182952.C.xc.b Prairie vole DUPLICATION Prairie vole MODERN SPECIES 360 Dcaf12l2 (ENSMOCG00000021979) ENSMOCG00000006467 Tex13c1 (ENSMOCG00000008436) ENSMOCG00000008269 Tenm1 (ENSMOCG00000007304) #9 Sh2d1a (ENSMOCG00000004698) #10 Tex13d (ENSMOCG00000017962) Stag2 (ENSMOCG00000004951) #12 Xiap (ENSMOCG00000022406) #13 Thoc2 (ENSMOCG00000009946) #14 ENSMOCG00000016033 Gria3 (ENSMOCG00000002499) #15 ENSMOCG00000020006 ENSMOCG00000009666 6030498E09Rik (ENSMOCG00000012857) ENSMOCG00000015671 #22 Mcts1 (ENSMOCG00000018373) #23 ENSMOCG00000017082 #24 Lamp2 (ENSMOCG00000012759) #25 Tex13c3 (ENSMOCG00000021332) Atp1b4 (ENSMOCG00000013501) #26 Tmem255a (ENSMOCG00000011328) #27 Zbtb33 (ENSMOCG00000022606) #28 Gpc4 (ENSMOCG00000012439) Gpc3 (ENSMOCG00000019423) ENSMOCG00000008464 Ccdc160 (ENSMOCG00000015246) Phf6 (ENSMOCG00000018706) ENSMOCG00000012929 Hprt (ENSMOCG00000020974) Plac1 (ENSMOCG00000007691) Prairie vole MODERN SPECIES 87 Hilpda (ENSMOCG00000001096) Impdh1 (ENSMOCG00000008218) Prrt4 (ENSMOCG00000020766) Rbm28 (ENSMOCG00000014615) Lep (ENSMOCG00000015600) Lrrc4 (ENSMOCG00000005637) Snd1 (ENSMOCG00000005040) Pax4 (ENSMOCG00000018632) Fscn3 (ENSMOCG00000005936) Arf5 (ENSMOCG00000022861) Gcc1 (ENSMOCG00000022632) ENSMOCG00000004985 ENSMOCG00000014942 Grm8 (ENSMOCG00000012255) ENSMOCG00000005667 ENSMOCG00000003837 #22 Pot1a (ENSMOCG00000013730) Gpr37 (ENSMOCG00000004144) ENSMOCG00000000208 ENSMOCG00000020573 ENSMOCG00000004830 Tmem229a (ENSMOCG00000005436) Hyal5 (ENSMOCG00000005616) Spam1 (ENSMOCG00000019823) Hyal4 (ENSMOCG00000016868) Hyal6 (ENSMOCG00000011551) Wasl (ENSMOCG00000010725) Lmod2 (ENSMOCG00000002701) Asb15 (ENSMOCG00000020491) Ndufa5 (ENSMOCG00000007318) Iqub (ENSMOCG00000019365) Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000025048 Prr32 (ENSPEMG00000015245) Dcaf12l1 (ENSPEMG00000026236) ENSPEMG00000026691 Dcaf12l2 (ENSPEMG00000025693) Tex13c1 (ENSPEMG00000016262) Tenm1 (ENSPEMG00000006985) #9 Sh2d1a (ENSPEMG00000010822) #10 Stag2 (ENSPEMG00000004299) #12 ENSPEMG00000027841 Xiap (ENSPEMG00000020438) #13 Thoc2 (ENSPEMG00000007626) #14 Gria3 (ENSPEMG00000020768) #15 ENSPEMG00000025713 ENSPEMG00000026463 C1galt1c1 (ENSPEMG00000003943) #22 Mcts1 (ENSPEMG00000014914) #23 Cul4b (ENSPEMG00000008902) #24 ENSPEMG00000030809 #25 Tex13c3 (ENSPEMG00000006117) Atp1b4 (ENSPEMG00000026754) #26 Tmem255a (ENSPEMG00000020511) #27 Zbtb33 (ENSPEMG00000023331) #28 ENSPEMG00000017846 ENSPEMG00000013786 ENSPEMG00000026490 ENSPEMG00000002101 ENSPEMG00000025608 ENSPEMG00000017550 ENSPEMG00000029359 ENSPEMG00000027345 Murinae ANCESTRAL SPECIES 14 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00940000154287.a.g.b ENSGT01050000245028.C ENSGT01050000245028.A ENSGT00520000058743 ENSGT00390000016292.g.a.a #33 ENSGT00390000007560 #32 Mus ANCESTRAL SPECIES 9 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00940000166354 ENSGT00940000154287.a.h ENSGT00950000182952.C.xc.b ENSGT00730000112198.a.a ENSGT00700000106005 ENSGT01050000245028.A Mus_A ANCESTRAL SPECIES 15 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00940000166354 ENSGT00940000154287.a.h ENSGT00950000182952.C.xc.b ENSGT01050000245028.A.a.b ENSGT00520000058743 ENSGT00390000016292.g.a.a #33 ENSGT00390000007560 #32 Mus_B ANCESTRAL SPECIES 14 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00940000166354 ENSGT00940000154287.a.h ENSGT00950000182952.C.xc.b ENSGT01050000245028.A.a.b ENSGT00520000058743 ENSGT00390000016292.g.a.a #33 ENSGT00390000007560 #32 Mouse MODERN SPECIES 37 Ocrl (ENSMUSG00000001173) Smarca1 (ENSMUSG00000031099) Actrt1 (ENSMUSG00000046615) Prr32 (ENSMUSG00000037086) Dcaf12l1 (ENSMUSG00000045284) Dcaf12l2 (ENSMUSG00000050926) Tex13c1 (ENSMUSG00000078320) Tenm1 (ENSMUSG00000016150) #9 Sh2d1a (ENSMUSG00000005696) #10 Tex13d (ENSMUSG00000105993) Stag2 (ENSMUSG00000025862) #12 Xiap (ENSMUSG00000025860) #13 Thoc2 (ENSMUSG00000037475) #14 Gria3 (ENSMUSG00000001986) #15 6030498E09Rik (ENSMUSG00000051361) C1galt1c1 (ENSMUSG00000048970) #22 Mcts1 (ENSMUSG00000000355) #23 Cul4b (ENSMUSG00000031095) #24 Lamp2 (ENSMUSG00000016534) #25 Atp1b4 (ENSMUSG00000016327) #26 Tmem255a (ENSMUSG00000036502) #27 Zbtb33 (ENSMUSG00000048047) #28 Rhox13 (ENSMUSG00000050197) Rhox12 (ENSMUSG00000071766) Rhox11 (ENSMUSG00000051038) Rhox10 (ENSMUSG00000053909) Rhox9 (ENSMUSG00000068048) Rhox7b (ENSMUSG00000079626) Rhox8 (ENSMUSG00000064137) Rhox7a (ENSMUSG00000071767) Rhox6 (ENSMUSG00000006200) Mus_C ANCESTRAL SPECIES 27 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.r ENSGT00940000161322.q ENSGT00940000161768.A.i ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.j ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.g #14 ENSGT00940000156123.b #15 ENSGT01050000245360 ENSGT00940000155145.e #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00920000149445 ENSGT00940000166354 ENSGT00940000154287.a.h ENSGT00950000182952.C.xc.b ENSGT00700000106005 ENSGT01050000245028.A.a.b ENSGT00520000058743 ENSGT00390000016292.g.a.a #33 spretus MODERN SPECIES 19 Apln (MGP_SPRETEiJ_G0034194) Ocrl (MGP_SPRETEiJ_G0034193) Smarca1 (MGP_SPRETEiJ_G0034192) Actrt1 (MGP_SPRETEiJ_G0034191) Prr32 (MGP_SPRETEiJ_G0034190) Dcaf12l1 (MGP_SPRETEiJ_G0034189) Dcaf12l2 (MGP_SPRETEiJ_G0034188) Tex13c1 (MGP_SPRETEiJ_G0034187) Tenm1 (MGP_SPRETEiJ_G0034186) #9 Tex13d (MGP_SPRETEiJ_G0034184) Stag2 (MGP_SPRETEiJ_G0034183) #12 Xiap (MGP_SPRETEiJ_G0034182) #13 Thoc2 (MGP_SPRETEiJ_G0034181) #14 Gria3 (MGP_SPRETEiJ_G0034180) #15 6030498E09Rik (MGP_SPRETEiJ_G0034179) C1galt1c1 (MGP_SPRETEiJ_G0034178) #22 Mcts1 (MGP_SPRETEiJ_G0034177) #23 Cul4b (MGP_SPRETEiJ_G0034176) #24 Lamp2 (MGP_SPRETEiJ_G0034175) #25 Atp1b4 (MGP_SPRETEiJ_G0034174) #26 Tmem255a (MGP_SPRETEiJ_G0034173) #27 Zbtb33 (MGP_SPRETEiJ_G0034172) #28 Rhox13 (MGP_SPRETEiJ_G0034171) Rhox12 (MGP_SPRETEiJ_G0034170) Rhox11 (MGP_SPRETEiJ_G0034169) MGP_SPRETEiJ_G0034168 MGP_SPRETEiJ_G0034166 MGP_SPRETEiJ_G0034165 MGP_SPRETEiJ_G0034164 MGP_SPRETEiJ_G0034163 MGP_SPRETEiJ_G0034162 Steppe mouse MODERN SPECIES 1722 C1galt1c1 (ENSMSIG00000023444) #22 Mcts1 (ENSMSIG00000023448) #23 Ryukyu mouse MODERN SPECIES 19 Apln (MGP_CAROLIEiJ_G0033036) Ocrl (MGP_CAROLIEiJ_G0033035) Smarca1 (MGP_CAROLIEiJ_G0033034) Actrt1 (MGP_CAROLIEiJ_G0033033) Prr32 (MGP_CAROLIEiJ_G0033032) Dcaf12l1 (MGP_CAROLIEiJ_G0033031) Dcaf12l2 (MGP_CAROLIEiJ_G0033030) Tex13c1 (MGP_CAROLIEiJ_G0033029) Tenm1 (MGP_CAROLIEiJ_G0033028) #9 Tex13d (MGP_CAROLIEiJ_G0033026) Stag2 (MGP_CAROLIEiJ_G0033025) #12 Xiap (MGP_CAROLIEiJ_G0033024) #13 Thoc2 (MGP_CAROLIEiJ_G0033023) #14 Gria3 (MGP_CAROLIEiJ_G0033022) #15 6030498E09Rik (MGP_CAROLIEiJ_G0033021) C1galt1c1 (MGP_CAROLIEiJ_G0033020) #22 Mcts1 (MGP_CAROLIEiJ_G0033019) #23 Cul4b (MGP_CAROLIEiJ_G0033018) #24 Lamp2 (MGP_CAROLIEiJ_G0033017) #25 MGP_CAROLIEiJ_G0033016 #26 MGP_CAROLIEiJ_G0033015 Tmem255a (MGP_CAROLIEiJ_G0033014) #27 Zbtb33 (MGP_CAROLIEiJ_G0033013) #28 Rhox13 (MGP_CAROLIEiJ_G0033012) Rhox12 (MGP_CAROLIEiJ_G0033011) Rhox11 (MGP_CAROLIEiJ_G0033010) Rhox10 (MGP_CAROLIEiJ_G0033009) MGP_CAROLIEiJ_G0033007 Rhox6 (MGP_CAROLIEiJ_G0033005) MGP_CAROLIEiJ_G0033004 MGP_CAROLIEiJ_G0033003 Shrew mouse MODERN SPECIES 23 Apln (MGP_PahariEiJ_G0031581) Ocrl (MGP_PahariEiJ_G0031580) Smarca1 (MGP_PahariEiJ_G0031579) Actrt1 (MGP_PahariEiJ_G0031578) Prr32 (MGP_PahariEiJ_G0031577) Dcaf12l2 (MGP_PahariEiJ_G0031576) Tex13c1 (MGP_PahariEiJ_G0031575) Tenm1 (MGP_PahariEiJ_G0031574) #9 Sh2d1a (MGP_PahariEiJ_G0031573) #10 Tex13d (MGP_PahariEiJ_G0031572) Stag2 (MGP_PahariEiJ_G0031571) #12 Xiap (MGP_PahariEiJ_G0031570) #13 Thoc2 (MGP_PahariEiJ_G0031569) #14 Gria3 (MGP_PahariEiJ_G0031568) #15 6030498E09Rik (MGP_PahariEiJ_G0031567) C1galt1c1 (MGP_PahariEiJ_G0031566) #22 Mcts1 (MGP_PahariEiJ_G0031565) #23 MGP_PahariEiJ_G0031564 #24 Lamp2 (MGP_PahariEiJ_G0031563) #25 MGP_PahariEiJ_G0031562 Atp1b4 (MGP_PahariEiJ_G0031561) #26 Tmem255a (MGP_PahariEiJ_G0031560) #27 Zbtb33 (MGP_PahariEiJ_G0031559) #28 MGP_PahariEiJ_G0031558 Rhox12 (MGP_PahariEiJ_G0031557) Rhox11 (MGP_PahariEiJ_G0031556) Rhox10 (MGP_PahariEiJ_G0031555) MGP_PahariEiJ_G0031554 MGP_PahariEiJ_G0031553 MGP_PahariEiJ_G0031552 MGP_PahariEiJ_G0031551 Rat MODERN SPECIES 46 Dcaf12l1 (ENSRNOG00000023458) Dcaf12l2 (ENSRNOG00000031533) LOC691030 (ENSRNOG00000070784) Tex13c (ENSRNOG00000045953) Tenm1 (ENSRNOG00000062454) #9 AABR07041403.1 (ENSRNOG00000057469) Stag2 (ENSRNOG00000029885) #12 Xiap (ENSRNOG00000006967) #13 Thoc2 (ENSRNOG00000007315) #14 Gria3 (ENSRNOG00000007682) #15 RGD1563307 (ENSRNOG00000028984) ENSRNOG00000068749 AABR07038676.1 (ENSRNOG00000028202) RGD1560124 (ENSRNOG00000063278) LOC691215 (ENSRNOG00000028189) C1galt1c1 (ENSRNOG00000069353) #22 Mcts1 (ENSRNOG00000002563) #23 Cul4b (ENSRNOG00000002585) #24 LOC100360128 (ENSRNOG00000068620) Lamp2 (ENSRNOG00000000164) #25 Atp1b4 (ENSRNOG00000007059) #26 Tmem255a (ENSRNOG00000028085) #27 Zbtb33 (ENSRNOG00000028899) #28 Rhox13 (ENSRNOG00000028050) Rhox12 (ENSRNOG00000040033) Rhox11 (ENSRNOG00000028044) Rhox10 (ENSRNOG00000040026) Btg1b (ENSRNOG00000047100) RGD1566035 (ENSRNOG00000030645) Btg1c (ENSRNOG00000032390) ENSRNOG00000065266 Muroidea_A ANCESTRAL SPECIES ENSGT00940000155145.f #22 Murinae ANCESTRAL SPECIES ENSGT00940000155145.f #22 Rat MODERN SPECIES 5 Sepsecs (ENSRNOG00000049244) Pi4k2b (ENSRNOG00000003924) Zcchc4 (ENSRNOG00000029064) Anapc4 (ENSRNOG00000004130) Slc34a2 (ENSRNOG00000004626) Sel1l3 (ENSRNOG00000004932) AABR07015507.1 (ENSRNOG00000051190) LOC100361259 (ENSRNOG00000055911) Rbpj (ENSRNOG00000046327) Cckar (ENSRNOG00000043124) Tbc1d19 (ENSRNOG00000003003) Stim2 (ENSRNOG00000002956) ENSRNOG00000067114 Pcdh7 (ENSRNOG00000012367) Pcdh7 (ENSRNOG00000063828) ENSRNOG00000067336 #22 AABR07015346.1 (ENSRNOG00000027791) ENSRNOG00000065159 LOC108348204 (ENSRNOG00000063351) ENSRNOG00000065472 Arap2 (ENSRNOG00000056826) AABR07015180.1 (ENSRNOG00000026134) Nwd2 (ENSRNOG00000051837) LOC498368 (ENSRNOG00000002191) Rell1 (ENSRNOG00000002192) Pgm2 (ENSRNOG00000002185) Tbc1d1 (ENSRNOG00000002180) Klf3 (ENSRNOG00000002163) Tlr10 (ENSRNOG00000067138) Tlr1 (ENSRNOG00000038722) Tlr6 (ENSRNOG00000002161) Mus ANCESTRAL SPECIES ENSGT00940000155145.f #22 Mus_A ANCESTRAL SPECIES ENSGT00940000155145.f #22 Mus_B ANCESTRAL SPECIES ENSGT00940000155145.f #22 Mus_C ANCESTRAL SPECIES ENSGT00940000155145.f #22 Steppe mouse MODERN SPECIES 2006 ENSMSIG00000005209 ENSMSIG00000005223 #22 Cricetidae ANCESTRAL SPECIES ENSGT00940000155145.f #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000155145.f #22 Northern American deer mouse MODERN SPECIES 1 Klhl5 (ENSPEMG00000010526) Tmem156 (ENSPEMG00000008551) Fam114a1 (ENSPEMG00000007358) Tlr1 (ENSPEMG00000005760) Klf3 (ENSPEMG00000026686) ENSPEMG00000027929 Tbc1d1 (ENSPEMG00000001751) Pgm2 (ENSPEMG00000000146) Rell1 (ENSPEMG00000019052) 0610040J01Rik (ENSPEMG00000018765) Nwd2 (ENSPEMG00000018695) Dthd1 (ENSPEMG00000018338) Arap2 (ENSPEMG00000017210) ENSPEMG00000029590 ENSPEMG00000014650 ENSPEMG00000029628 #22 ENSPEMG00000026158 ENSPEMG00000025746 Pcdh7 (ENSPEMG00000012079) ENSPEMG00000008427 Stim2 (ENSPEMG00000013752) Tbc1d19 (ENSPEMG00000010326) Cckar (ENSPEMG00000025192) Rbpj (ENSPEMG00000010386) Smim20 (ENSPEMG00000030098) Sel1l3 (ENSPEMG00000020373) Slc34a2 (ENSPEMG00000007479) Anapc4 (ENSPEMG00000014070) ENSPEMG00000029080 Zcchc4 (ENSPEMG00000013522) Pi4k2b (ENSPEMG00000007793) Upper Galilee mountains blind mole rat MODERN SPECIES 867 Actrt1 (ENSNGAG00000017516) Prr32 (ENSNGAG00000018571) Dcaf12l1 (ENSNGAG00000008435) Dcaf12l2 (ENSNGAG00000008204) ENSNGAG00000023954 Tenm1 (ENSNGAG00000021131) #9 Sh2d1a (ENSNGAG00000017513) #10 Stag2 (ENSNGAG00000002829) #12 ENSNGAG00000022969 Xiap (ENSNGAG00000024097) #13 ENSNGAG00000000760 Thoc2 (ENSNGAG00000016184) #14 Gria3 (ENSNGAG00000012449) #15 ENSNGAG00000002467 6030498E09Rik (ENSNGAG00000016897) C1galt1c1 (ENSNGAG00000003804) #22 Mcts1 (ENSNGAG00000010362) #23 Cul4b (ENSNGAG00000013145) #24 ENSNGAG00000001935 Lamp2 (ENSNGAG00000016144) #25 Atp1b4 (ENSNGAG00000020181) #26 Tmem255a (ENSNGAG00000019345) #27 Zbtb33 (ENSNGAG00000009109) #28 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 53 ENSJJAG00000023370 ENSJJAG00000013754 ENSJJAG00000018368 Prr32 (ENSJJAG00000016058) ENSJJAG00000009849 ENSJJAG00000018053 Tenm1 (ENSJJAG00000014199) #9 Sh2d1a (ENSJJAG00000000227) #10 ENSJJAG00000012879 Stag2 (ENSJJAG00000020364) #12 ENSJJAG00000023301 Xiap (ENSJJAG00000006601) #13 Thoc2 (ENSJJAG00000017282) #14 Gria3 (ENSJJAG00000011967) #15 ENSJJAG00000008089 ENSJJAG00000021787 #22 Mcts1 (ENSJJAG00000000514) #23 Cul4b (ENSJJAG00000012005) #24 Lamp2 (ENSJJAG00000004795) #25 Tex13c3 (ENSJJAG00000021107) Atp1b4 (ENSJJAG00000012799) #26 ENSJJAG00000024118 Tmem255a (ENSJJAG00000011698) #27 Zbtb33 (ENSJJAG00000005119) #28 ENSJJAG00000019780 Lesser Egyptian jerboa MODERN SPECIES 149 Bpifa3 (ENSJJAG00000012935) ENSJJAG00000022519 Bpifb1 (ENSJJAG00000023259) Bpifb5 (ENSJJAG00000016027) ENSJJAG00000016210 Snta1 (ENSJJAG00000020267) Cbfa2t2 (ENSJJAG00000012293) Necab3 (ENSJJAG00000020960) 1700003F12Rik (ENSJJAG00000010475) E2f1 (ENSJJAG00000022378) Pxmp4 (ENSJJAG00000016829) Zfp341 (ENSJJAG00000020905) Chmp4b (ENSJJAG00000013547) Raly (ENSJJAG00000008473) Eif2s2 (ENSJJAG00000014081) ENSJJAG00000001144 #22 a (ENSJJAG00000018926) ENSJJAG00000022935 Itch (ENSJJAG00000000211) ENSJJAG00000005483 Map1lc3a (ENSJJAG00000010977) Pigu (ENSJJAG00000021314) Trp53inp2 (ENSJJAG00000019307) Ggt7 (ENSJJAG00000016677) Acss2 (ENSJJAG00000014518) Gss (ENSJJAG00000019451) Myh7b (ENSJJAG00000011461) Edem2 (ENSJJAG00000006740) Procr (ENSJJAG00000011230) Mmp24 (ENSJJAG00000018735) Eif6 (ENSJJAG00000006310) Kangaroo rat MODERN SPECIES 357 Zdhhc9 (ENSDORG00000024469) Sash3 (ENSDORG00000012044) Xpnpep2 (ENSDORG00000012043) Apln (ENSDORG00000007273) Ocrl (ENSDORG00000004469) Smarca1 (ENSDORG00000009270) Prr32 (ENSDORG00000008230) ENSDORG00000006515 Tenm1 (ENSDORG00000012135) #9 Sh2d1a (ENSDORG00000012131) #10 Stag2 (ENSDORG00000003109) #12 Xiap (ENSDORG00000010762) #13 ENSDORG00000027353 #14 ENSDORG00000027486 Gria3 (ENSDORG00000003484) #15 C1galt1c1 (ENSDORG00000027468) #22 Mcts1 (ENSDORG00000027394) #23 Cul4b (ENSDORG00000012005) #24 Lamp2 (ENSDORG00000006433) #25 ENSDORG00000023555 Atp1b4 (ENSDORG00000010554) #26 Tmem255a (ENSDORG00000009805) #27 Zbtb33 (ENSDORG00000023347) #28 ENSDORG00000024775 ENSDORG00000024355 Lagomorpha ANCESTRAL SPECIES 51 ENSGT00940000159999 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 Rabbit MODERN SPECIES 1401 ENSOCUG00000029410 PRR32 (ENSOCUG00000015056) ENSOCUG00000000908 ENSOCUG00000010499 ENSOCUG00000006392 ENSOCUG00000023025 TENM1 (ENSOCUG00000005013) #9 SH2D1A (ENSOCUG00000005012) #10 ENSOCUG00000022591 STAG2 (ENSOCUG00000009879) #12 ENSOCUG00000009878 #13 THOC2 (ENSOCUG00000005996) #14 GRIA3 (ENSOCUG00000000315) #15 ENSOCUG00000021549 ENSOCUG00000027726 C1GALT1C1 (ENSOCUG00000004781) #22 ENSOCUG00000014315 #23 CUL4B (ENSOCUG00000015633) #24 ENSOCUG00000027764 LAMP2 (ENSOCUG00000024954) #25 ATP1B4 (ENSOCUG00000003951) #26 TMEM255A (ENSOCUG00000004334) #27 ZBTB33 (ENSOCUG00000004331) #28 ENSOCUG00000029262 ENSOCUG00000013944 ENSOCUG00000025252 ENSOCUG00000033765 ENSOCUG00000030699 ENSOCUG00000038471 DIAPH2 (ENSOCUG00000007109) ENSOCUG00000003552 Pika MODERN SPECIES 6353 C1GALT1C1 (ENSOPRG00000010001) #22 MCTS1 (ENSOPRG00000009991) #23 Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00920000150742 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00910000148371 ENSGT00390000016775 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00940000157675 ENSGT00390000015500 ENSGT00910000146759 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00940000155129.B ENSGT00530000063557.b Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155145 #22 Common shrew MODERN SPECIES 10213 C1GALT1C1 (ENSSARG00000014316) #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253 #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000164624 #29 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00390000002253 #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964.i.a.b #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 Chiroptera ANCESTRAL SPECIES 28 ENSGT00940000153737.a ENSGT00390000008142 ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00390000012726 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a.b #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00950000184857 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000016292.j #33 ENSGT00390000017146.a #34 Microchiroptera ANCESTRAL SPECIES 28 ENSGT00940000153737.a ENSGT00390000008142 ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00390000012726 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a.b #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00950000184857 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000016292.j #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Greater horseshoe bat MODERN SPECIES ENSRFEG00010001706 ENSRFEG00010001715 STAG2 (ENSRFEG00010001764) #12 XIAP (ENSRFEG00010001930) #13 ENSRFEG00010001946 ENSRFEG00010001965 ENSRFEG00010001976 ENSRFEG00010001983 THOC2 (ENSRFEG00010002030) #14 ENSRFEG00010002182 ENSRFEG00010002197 GRIA3 (ENSRFEG00010002235) #15 ENSRFEG00010002304 ENSRFEG00010002315 ENSRFEG00010002340 C1GALT1C1 (ENSRFEG00010002347) #22 MCTS1 (ENSRFEG00010002366) #23 CUL4B (ENSRFEG00010002422) #24 LAMP2 (ENSRFEG00010002495) #25 ENSRFEG00010002563 ATP1B4 (ENSRFEG00010002584) #26 TMEM255A (ENSRFEG00010002695) #27 ENSRFEG00010002755 ZBTB33 (ENSRFEG00010008643) #28 NKAP (ENSRFEG00010008685) #30 ENSRFEG00010008720 ENSRFEG00010008865 #32 ENSRFEG00010008896 #33 ENSRFEG00010008919 ENSRFEG00010008994 #34 ENSRFEG00010009058 ##35 Microbat MODERN SPECIES 939 ENSMLUG00000025391 ENSMLUG00000029909 DCAF12L2 (ENSMLUG00000015935) ENSMLUG00000025675 ENSMLUG00000028867 ENSMLUG00000030179 ENSMLUG00000025681 TENM1 (ENSMLUG00000014882) #9 ENSMLUG00000024778 SH2D1A (ENSMLUG00000014879) #10 STAG2 (ENSMLUG00000009349) #12 XIAP (ENSMLUG00000001731) #13 ENSMLUG00000027315 ENSMLUG00000013656 #14 GRIA3 (ENSMLUG00000007407) #15 C1GALT1C1 (ENSMLUG00000012757) #22 MCTS1 (ENSMLUG00000015101) #23 CUL4B (ENSMLUG00000013231) #24 LAMP2 (ENSMLUG00000012320) #25 ATP1B4 (ENSMLUG00000012306) #26 TMEM255A (ENSMLUG00000016410) #27 ENSMLUG00000025783 #28 ENSMLUG00000007665 NKAP (ENSMLUG00000008310) #30 NDUFA1 (ENSMLUG00000006685) #32 ENSMLUG00000016812 #33 UPF3B (ENSMLUG00000010821) #34 ENSMLUG00000000421 #35 SEPTIN6 (ENSMLUG00000005623) #37 NKRF (ENSMLUG00000005621) UBE2A (ENSMLUG00000005620) Megabat MODERN SPECIES 8290 C1GALT1C1 (ENSPVAG00000013252) #22 MCTS1 (ENSPVAG00000013249) #23 Equus DUPLICATION Equus ANCESTRAL SPECIES 39 ENSGT00940000162451 ENSGT00390000012726 ENSGT00390000014818 ENSGT00940000153294.m.a ENSGT00940000161322.p ENSGT00940000161322.o ENSGT00940000161768.A.h.b ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.h.a ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145.nb #22 ENSGT00550000074964.i.a.b #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a.g #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 Donkey MODERN SPECIES 36 RAB39B (ENSEASG00005034031) ENSEASG00005024036 ENSEASG00005001752 ENSEASG00005001750 ENSEASG00005038101 ENSEASG00005011059 ENSEASG00005011061 ENSEASG00005036960 ENSEASG00005035090 TCEAL1 (ENSEASG00005025524) MORF4L2 (ENSEASG00005002526) ENSEASG00005002530 TMEM31 (ENSEASG00005002551) PLP1 (ENSEASG00005002561) ENSEASG00005029160 ENSEASG00005038628 #22 MCTS1 (ENSEASG00005023018) #23 CUL4B (ENSEASG00005000286) #24 LAMP2 (ENSEASG00005002906) #25 ENSEASG00005035999 ATP1B4 (ENSEASG00005007677) #26 TMEM255A (ENSEASG00005007676) #27 ZBTB33 (ENSEASG00005035639) #28 ENSEASG00005007672 NKAP (ENSEASG00005034042) #30 ENSEASG00005033195 #31 NDUFA1 (ENSEASG00005027764) #32 ENSEASG00005027543 #33 UPF3B (ENSEASG00005012919) #34 ENSEASG00005026771 #35 SOWAHD (ENSEASG00005028350) #36 Horse MODERN SPECIES 480 ENSECAG00000057856 PRR32 (ENSECAG00000007753) ENSECAG00000036830 ENSECAG00000040014 DCAF12L2 (ENSECAG00000030430) ENSECAG00000038263 TENM1 (ENSECAG00000019099) #9 ENSECAG00000033805 SH2D1A (ENSECAG00000032752) #10 ENSECAG00000058954 STAG2 (ENSECAG00000020917) #12 XIAP (ENSECAG00000020071) #13 THOC2 (ENSECAG00000010431) #14 GRIA3 (ENSECAG00000017297) #15 ENSECAG00000033012 C1GALT1C1 (ENSECAG00000004034) #22 MCTS1 (ENSECAG00000014597) #23 CUL4B (ENSECAG00000023670) #24 ENSECAG00000051866 ENSECAG00000037515 ENSECAG00000018396 ATP1B4 (ENSECAG00000013702) #26 LAMP2 (ENSECAG00000018467) #25 TMEM255A (ENSECAG00000009038) #27 ZBTB33 (ENSECAG00000007205) #28 ENSECAG00000039402 ENSECAG00000028584 NKAP (ENSECAG00000021142) #30 ENSECAG00000056403 #31 ENSECAG00000003934 #33 UPF3B (ENSECAG00000016947) #34 Equus ANCESTRAL SPECIES ENSGT00940000155145.ob #22 Donkey MODERN SPECIES 2 GLRX (ENSEASG00005027513) ELL2 (ENSEASG00005019439) PCSK1 (ENSEASG00005019297) ENSEASG00005033351 CAST (ENSEASG00005019257) ERAP1 (ENSEASG00005019249) ERAP2 (ENSEASG00005018877) LNPEP (ENSEASG00005018806) ENSEASG00005025234 LIX1 (ENSEASG00005029451) RIOK2 (ENSEASG00005018799) ENSEASG00005018798 RGMB (ENSEASG00005018795) ENSEASG00005024325 ENSEASG00005016110 ENSEASG00005023017 #22 ENSEASG00005026132 ENSEASG00005015877 ENSEASG00005015872 SLCO4C1 (ENSEASG00005015860) SLCO6A1 (ENSEASG00005033983) PAM (ENSEASG00005015841) GIN1 (ENSEASG00005015827) PPIP5K2 (ENSEASG00005015801) MACIR (ENSEASG00005026920) ENSEASG00005015783 NUDT12 (ENSEASG00005015778) EFNA5 (ENSEASG00005015772) FBXL17 (ENSEASG00005015766) ENSEASG00005015769 ENSEASG00005036232 Carnivora ANCESTRAL SPECIES 11 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Caniformia ANCESTRAL SPECIES 22 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A.f.b ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.f.a ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Caniformia_b ANCESTRAL SPECIES 27 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A.f.b ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.f.a ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00390000014814.a.b.a.a.b ##35 Ursidae ANCESTRAL SPECIES 33 ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a ENSGT00390000012726 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 Ursus ANCESTRAL SPECIES 228 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00950000185805 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 Polar bear MODERN SPECIES 348 ENSUMAG00000024573 ENSUMAG00000024570 TENM1 (ENSUMAG00000024565) #9 SH2D1A (ENSUMAG00000024560) #10 STAG2 (ENSUMAG00000024496) #12 XIAP (ENSUMAG00000024493) #13 ENSUMAG00000024491 THOC2 (ENSUMAG00000024014) #14 GRIA3 (ENSUMAG00000023092) #15 ENSUMAG00000022984 ENSUMAG00000022982 C1GALT1C1 (ENSUMAG00000022981) #22 MCTS1 (ENSUMAG00000022978) #23 ENSUMAG00000022976 CUL4B (ENSUMAG00000021955) #24 LAMP2 (ENSUMAG00000021768) #25 ATP1B4 (ENSUMAG00000021751) #26 TMEM255A (ENSUMAG00000021743) #27 ZBTB33 (ENSUMAG00000021739) #28 American black bear MODERN SPECIES 613 C1GALT1C1 (ENSUAMG00000007561) #22 MCTS1 (ENSUAMG00000007558) #23 CUL4B (ENSUAMG00000007316) #24 LAMP2 (ENSUAMG00000007279) #25 Giant Panda MODERN SPECIES 2288 ENSAMEG00000025056 OCRL (ENSAMEG00000015161) SMARCA1 (ENSAMEG00000015218) ACTRT1 (ENSAMEG00000020291) ENSAMEG00000011434 PRR32 (ENSAMEG00000000802) ENSAMEG00000010565 ENSAMEG00000025832 ENSAMEG00000027007 TENM1 (ENSAMEG00000015645) #9 SH2D1A (ENSAMEG00000015726) #10 STAG2 (ENSAMEG00000015732) #12 XIAP (ENSAMEG00000015800) #13 THOC2 (ENSAMEG00000014841) #14 GRIA3 (ENSAMEG00000014750) #15 C1GALT1C1 (ENSAMEG00000019858) #22 MCTS1 (ENSAMEG00000029271) #23 CUL4B (ENSAMEG00000000210) #24 LAMP2 (ENSAMEG00000000199) #25 ENSAMEG00000028733 ATP1B4 (ENSAMEG00000000185) #26 TMEM255A (ENSAMEG00000000183) #27 ZBTB33 (ENSAMEG00000019851) #28 ENSAMEG00000028340 NKAP (ENSAMEG00000000173) #30 ENSAMEG00000000172 #31 NDUFA1 (ENSAMEG00000000169) #32 ENSAMEG00000019845 #33 UPF3B (ENSAMEG00000000163) #34 ENSAMEG00000026154 #35 ENSAMEG00000000162 Mustelinae ANCESTRAL SPECIES 114 ENSGT00940000161768.A.f.b ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.f.a ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000016794.b ENSGT01000000214669 ENSGT01050000244848.A.a.h ENSGT00390000002253 #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000159399.i ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a.c #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a.b ##35 ENSGT00950000183003.a.a.a.b #36 Ferret MODERN SPECIES 247 ENSMPUG00000001334 ENSMPUG00000001341 ENSMPUG00000001344 #9 ENSMPUG00000001346 #9 SH2D1A (ENSMPUG00000001348) #10 STAG2 (ENSMPUG00000001349) #12 XIAP (ENSMPUG00000001354) #13 ENSMPUG00000001356 THOC2 (ENSMPUG00000001357) #14 GRIA3 (ENSMPUG00000001367) #15 ENSMPUG00000001370 ENSMPUG00000001387 ENSMPUG00000001405 #20 C1GALT1C1 (ENSMPUG00000019354) #22 MCTS1 (ENSMPUG00000001407) #23 CUL4B (ENSMPUG00000001419) #24 LAMP2 (ENSMPUG00000001425) #25 ENSMPUG00000019355 ENSMPUG00000019356 ATP1B4 (ENSMPUG00000001429) #26 TMEM255A (ENSMPUG00000001469) #27 ZBTB33 (ENSMPUG00000019357) #28 ENSMPUG00000001475 ENSMPUG00000001479 ENSMPUG00000001482 #30 ENSMPUG00000001502 #30 ENSMPUG00000001526 #31 ENSMPUG00000001530 #32 ENSMPUG00000019358 #33 American mink MODERN SPECIES 70 ENSNVIG00000023141 TENM1 (ENSNVIG00000023117) #9 SH21A (ENSNVIG00000023107) #10 ENSNVIG00000023101 STAG2 (ENSNVIG00000023062) #12 XIAP (ENSNVIG00000023055) #13 THOC2 (ENSNVIG00000023027) #14 GRIA3 (ENSNVIG00000023008) #15 ENSNVIG00000023002 ENSNVIG00000022999 ENSNVIG00000022998 C1GLC (ENSNVIG00000022987) #22 MCTS1 (ENSNVIG00000022979) #23 ENSNVIG00000022975 CUL4B (ENSNVIG00000022565) #24 LAMP2 (ENSNVIG00000022516) #25 ENSNVIG00000022512 ATP1B4 (ENSNVIG00000022487) #26 ENSNVIG00000022475 TMEM255A (ENSNVIG00000022455) #27 ZBTB33 (ENSNVIG00000022444) #28 NKAP (ENSNVIG00000022430) #30 ENSNVIG00000022423 #31 ENSNVIG00000022422 #32 ENSNVIG00000022421 #33 UPF3B (ENSNVIG00000022408) #34 ENSNVIG00000022397 ##35 Canidae ANCESTRAL SPECIES 37 ENSGT00940000162451 ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a ENSGT00390000012726 ENSGT00940000161322 ENSGT00940000161768.A.f.b ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.f.a ENSGT01070000253921 ENSGT00390000015060.e.a.b.b ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a #33 ENSGT00940000154891 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 Canis_lupus ANCESTRAL SPECIES 22 ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a ENSGT00390000012726 ENSGT01030000234626.A.b.bb.a ENSGT00940000161322.n ENSGT00940000161768.A.f.b ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A.f.a ENSGT01070000253921 ENSGT00390000015060.e.a.b.b ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000163385.q.b ENSGT00940000163385.q.a ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a #33 ENSGT00940000154891 ENSGT00390000017146.a #34 Dog MODERN SPECIES 144 PRR32 (ENSCAFG00845030958) ENSCAFG00845030957 ENSCAFG00845030952 ENSCAFG00845030947 ENSCAFG00845030942 TENM1 (ENSCAFG00845028621) #9 SH2D1A (ENSCAFG00845026354) #10 TEX13C (ENSCAFG00845026297) ENSCAFG00845026263 ENSCAFG00845026217 STAG2 (ENSCAFG00845025790) #12 XIAP (ENSCAFG00845025680) #13 THOC2 (ENSCAFG00845025018) #14 GRIA3 (ENSCAFG00845024601) #15 ENSCAFG00845023844 C1GALT1C1 (ENSCAFG00845023816) #22 MCTS1 (ENSCAFG00845023647) #23 CUL4B (ENSCAFG00845022607) #24 LAMP2 (ENSCAFG00845022255) #25 ATP1B4 (ENSCAFG00845022165) #26 TMEM255A (ENSCAFG00845022011) #27 ENSCAFG00845021951 ZBTB33 (ENSCAFG00845021904) #28 ENSCAFG00845021834 ENSCAFG00845021663 ENSCAFG00845021586 NKAP (ENSCAFG00845021511) #30 ENSCAFG00845021464 #31 NDUFA1 (ENSCAFG00845021426) #32 RNF113A (ENSCAFG00845021403) #33 ENSCAFG00845021385 #36 Dingo MODERN SPECIES 347 ENSCAFG00020001864 ENSCAFG00020001871 TENM1 (ENSCAFG00020001899) #9 SH2D1A (ENSCAFG00020002131) #10 ENSCAFG00020002155 ENSCAFG00020002159 ENSCAFG00020002168 STAG2 (ENSCAFG00020002176) #12 ENSCAFG00020002197 XIAP (ENSCAFG00020002210) #13 THOC2 (ENSCAFG00020002284) #14 GRIA3 (ENSCAFG00020003597) #15 ENSCAFG00020003860 ENSCAFG00020003872 ENSCAFG00020003880 C1GALT1C1 (ENSCAFG00020003882) #22 MCTS1 (ENSCAFG00020003887) #23 CUL4B (ENSCAFG00020003894) #24 ENSCAFG00020003901 LAMP2 (ENSCAFG00020003912) #25 ATP1B4 (ENSCAFG00020003932) #26 TMEM255A (ENSCAFG00020003969) #27 ENSCAFG00020003976 ZBTB33 (ENSCAFG00020003977) #28 ENSCAFG00020003981 ENSCAFG00020003984 ENSCAFG00020003986 ENSCAFG00020003988 NKAP (ENSCAFG00020003993) #30 ENSCAFG00020004007 #31 ENSCAFG00020004036 #32 Red fox MODERN SPECIES 142 SH2D1A (ENSVVUG00000028891) #10 TEX13D (ENSVVUG00000028890) ENSVVUG00000028886 ENSVVUG00000028885 ENSVVUG00000028883 STAG2 (ENSVVUG00000028863) #12 XIAP (ENSVVUG00000028860) #13 ENSVVUG00000028857 THOC2 (ENSVVUG00000028282) #14 GRIA3 (ENSVVUG00000028161) #15 ENSVVUG00000028158 ENSVVUG00000028152 ENSVVUG00000028148 ENSVVUG00000028146 ENSVVUG00000028144 C1GALT1C1 (ENSVVUG00000028139) #22 ENSVVUG00000028136 #23 CUL4B (ENSVVUG00000028118) #24 LAMP2 (ENSVVUG00000028104) #25 ATP1B4 (ENSVVUG00000028081) #26 TMEM255A (ENSVVUG00000028079) #27 ENSVVUG00000028077 ZBTB33 (ENSVVUG00000028075) #28 Felidae ANCESTRAL SPECIES 12 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a.e #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Panthera ANCESTRAL SPECIES 33 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a.e #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Panthera_a ANCESTRAL SPECIES 34 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.q.a #32 ENSGT00390000016292.i.a.e #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 leopard MODERN SPECIES 88 PRR32 (ENSPPRG00000022856) ENSPPRG00000022864 ENSPPRG00000022893 DCAF12L2 (ENSPPRG00000011554) STAG2 (ENSPPRG00000022944) #12 XIAP (ENSPPRG00000023102) #13 THOC2 (ENSPPRG00000023137) #14 GRIA3 (ENSPPRG00000023249) #15 ENSPPRG00000023292 C1GALT1C1 (ENSPPRG00000011527) #22 ENSPPRG00000023309 #23 CUL4B (ENSPPRG00000023346) #24 LAMP2 (ENSPPRG00000023414) #25 ATP1B4 (ENSPPRG00000023444) #26 TMEM255A (ENSPPRG00000023467) #27 ZBTB33 (ENSPPRG00000011515) #28 NKAP (ENSPPRG00000023513) #30 NDUFA1 (ENSPPRG00000023520) #32 ENSPPRG00000011512 #33 UPF3B (ENSPPRG00000023536) #34 ENSPPRG00000023566 ##35 SOWAHD (ENSPPRG00000011509) #36 SEPTIN6 (ENSPPRG00000023588) #37 NKRF (ENSPPRG00000023645) UBE2A (ENSPPRG00000023666) lion MODERN SPECIES 88 APLN (ENSPLOG00000015978) OCRL (ENSPLOG00000016018) SMARCA1 (ENSPLOG00000016159) PRR32 (ENSPLOG00000016749) ENSPLOG00000016885 DCAF12L1 (ENSPLOG00000016923) DCAF12L2 (ENSPLOG00000016936) ENSPLOG00000016960 TENM1 (ENSPLOG00000017022) #9 SH2D1A (ENSPLOG00000017514) #10 ENSPLOG00000017569 STAG2 (ENSPLOG00000017643) #12 XIAP (ENSPLOG00000018095) #13 THOC2 (ENSPLOG00000018186) #14 GRIA3 (ENSPLOG00000018874) #15 C1GALT1C1 (ENSPLOG00000019272) #22 MCTS1 (ENSPLOG00000019307) #23 CUL4B (ENSPLOG00000019441) #24 LAMP2 (ENSPLOG00000019859) #25 ENSPLOG00000019924 ATP1B4 (ENSPLOG00000019958) #26 TMEM255A (ENSPLOG00000020123) #27 ZBTB33 (ENSPLOG00000020321) #28 NKAP (ENSPLOG00000020347) #30 ENSPLOG00000020364 #31 NDUFA1 (ENSPLOG00000020396) #32 ENSPLOG00000020415 #33 UPF3B (ENSPLOG00000020439) #34 ENSPLOG00000020482 #35 SOWAHD (ENSPLOG00000020504) #36 SEPTIN6 (ENSPLOG00000020549) #37 Tiger MODERN SPECIES 77 C1GALT1C1 (ENSPTIG00000008782) #22 MCTS1 (ENSPTIG00000011124) #23 CUL4B (ENSPTIG00000011154) #24 LAMP2 (ENSPTIG00000011192) #25 ATP1B4 (ENSPTIG00000011210) #26 TMEM255A (ENSPTIG00000011236) #27 ZBTB33 (ENSPTIG00000008786) #28 Cat MODERN SPECIES 252 ENSFCAG00000026303 ENSFCAG00000039628 PRR32 (ENSFCAG00000009525) DCAF12L1 (ENSFCAG00000041282) DCAF12L2 (ENSFCAG00000042396) ENSFCAG00000001211 ENSFCAG00000049757 TENM1 (ENSFCAG00000008355) #9 SH2D1A (ENSFCAG00000008354) #10 STAG2 (ENSFCAG00000027633) #12 XIAP (ENSFCAG00000012037) #13 THOC2 (ENSFCAG00000008301) #14 GRIA3 (ENSFCAG00000008299) #15 ENSFCAG00000022782 ENSFCAG00000029778 C1GALT1C1 (ENSFCAG00000010443) #22 MCTS1 (ENSFCAG00000038539) #23 CUL4B (ENSFCAG00000027979) #24 LAMP2 (ENSFCAG00000004533) #25 ENSFCAG00000050883 ATP1B4 (ENSFCAG00000041735) #26 TMEM255A (ENSFCAG00000014940) #27 ZBTB33 (ENSFCAG00000014939) #28 ENSFCAG00000049865 ENSFCAG00000049711 ENSFCAG00000053584 NKAP (ENSFCAG00000004392) #30 ENSFCAG00000048387 #31 ENSFCAG00000036619 #32 ENSFCAG00000025700 #33 UPF3B (ENSFCAG00000004388) #34 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253 #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000164624 #29 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 Suina DUPLICATION Suina ANCESTRAL SPECIES 7 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00940000161768.A ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145.pb #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163385 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 ENSGT00950000183003.a.a.a.b #36 Chacoan peccary MODERN SPECIES 13 XPNPEP2 (ENSCWAG00000002659) APLN (ENSCWAG00000002650) OCRL (ENSCWAG00000002577) SMARCA1 (ENSCWAG00000002437) ACTRT1 (ENSCWAG00000002404) PRR32 (ENSCWAG00000002388) ENSCWAG00000002386 ENSCWAG00000002381 ENSCWAG00000002366 TENM1 (ENSCWAG00000002189) #9 SH2D1A (ENSCWAG00000002130) #10 STAG2 (ENSCWAG00000001997) #12 XIAP (ENSCWAG00000001956) #13 THOC2 (ENSCWAG00000001845) #14 GRIA3 (ENSCWAG00000001789) #15 ENSCWAG00000001753 #22 MCTS1 (ENSCWAG00000001732) #23 CUL4B (ENSCWAG00000001697) #24 LAMP2 (ENSCWAG00000001667) #25 ENSCWAG00000001650 ATP1B4 (ENSCWAG00000001591) #26 TMEM255A (ENSCWAG00000001521) #27 ZBTB33 (ENSCWAG00000001486) #28 NKAP (ENSCWAG00000001471) #30 ENSCWAG00000001458 #31 NDUFA1 (ENSCWAG00000001448) #32 ENSCWAG00000001440 #33 UPF3B (ENSCWAG00000001420) #34 ENSCWAG00000001401 #35 SOWAHD (ENSCWAG00000001391) #36 SEPTIN6 (ENSCWAG00000001355) #37 Pig MODERN SPECIES 300 ENSSSCG00000054975 PRR32 (ENSSSCG00000012647) DCAF12L2 (ENSSSCG00000012645) TENM1 (ENSSSCG00000012644) #9 SH2D1A (ENSSSCG00000012643) #10 ENSSSCG00000059044 STAG2 (ENSSSCG00000012642) #12 XIAP (ENSSSCG00000025028) #13 THOC2 (ENSSSCG00000012639) #14 GRIA3 (ENSSSCG00000012638) #15 ENSSSCG00000042390 ENSSSCG00000061275 ENSSSCG00000061763 ENSSSCG00000055332 ENSSSCG00000044000 ENSSSCG00000012602 #22 MCTS1 (ENSSSCG00000030833) #23 CUL4B (ENSSSCG00000029478) #24 ENSSSCG00000042032 LAMP2 (ENSSSCG00000012604) #25 ATP1B4 (ENSSSCG00000012606) #26 TMEM255A (ENSSSCG00000012607) #27 ZBTB33 (ENSSSCG00000012608) #28 ENSSSCG00000041028 NKAP (ENSSSCG00000012613) #30 ENSSSCG00000047468 #31 NDUFA1 (ENSSSCG00000053432) #32 ENSSSCG00000032973 #33 UPF3B (ENSSSCG00000012617) #34 ENSSSCG00000030849 #35 SOWAHD (ENSSSCG00000012618) #36 Suina ANCESTRAL SPECIES 33 ENSGT00940000156247 ENSGT00940000159709 ENSGT00390000013778 ENSGT00940000153648.b ENSGT00940000153404.b ENSGT00940000160197 ENSGT00940000157221 ENSGT00390000000214.a.b.a ENSGT00390000000214.a.b.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00940000155145.qb #22 ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 Chacoan peccary MODERN SPECIES 960 RELL1 (ENSCWAG00000014911) C4orf19 (ENSCWAG00000014871) NWD2 (ENSCWAG00000014812) ENSCWAG00000014755 ##25 DTHD1 (ENSCWAG00000014349) ARAP2 (ENSCWAG00000014103) PCDH7 (ENSCWAG00000014012) ENSCWAG00000013963 STIM2 (ENSCWAG00000013559) TBC1D19 (ENSCWAG00000013346) CCKAR (ENSCWAG00000013281) RBPJ (ENSCWAG00000012916) SMIM20 (ENSCWAG00000012836) SEL1L3 (ENSCWAG00000012543) SLC34A2 (ENSCWAG00000012428) ENSCWAG00000012413 #22 ANAPC4 (ENSCWAG00000012255) ZCCHC4 (ENSCWAG00000012130) PI4K2B (ENSCWAG00000011991) SEPSECS (ENSCWAG00000011958) LGI2 (ENSCWAG00000011876) CCDC149 (ENSCWAG00000021648) SOD3 (ENSCWAG00000021634) DHX15 (ENSCWAG00000021627) ENSCWAG00000021624 PPARGC1A (ENSCWAG00000021590) GBA3 (ENSCWAG00000021575) ADGRA3 (ENSCWAG00000021565) KCNIP4 (ENSCWAG00000021434) PACRGL (ENSCWAG00000021407) SLIT2 (ENSCWAG00000021168) Pig MODERN SPECIES 16 C4orf19 (ENSSSCG00000008771) NWD2 (ENSSSCG00000008770) ENSSSCG00000008769 ##25 DTHD1 (ENSSSCG00000028471) ARAP2 (ENSSSCG00000008768) ENSSSCG00000008767 PCDH7 (ENSSSCG00000008765) ENSSSCG00000032413 STIM2 (ENSSSCG00000008762) TBC1D19 (ENSSSCG00000008761) CCKAR (ENSSSCG00000061661) RBPJ (ENSSSCG00000022155) ENSSSCG00000040571 SEL1L3 (ENSSSCG00000022446) SLC34A2 (ENSSSCG00000008758) ENSSSCG00000028632 #22 ANAPC4 (ENSSSCG00000025902) ZCCHC4 (ENSSSCG00000028581) PI4K2B (ENSSSCG00000027340) SEPSECS (ENSSSCG00000025315) LGI2 (ENSSSCG00000028927) CCDC149 (ENSSSCG00000023001) SOD3 (ENSSSCG00000028814) DHX15 (ENSSSCG00000008756) ENSSSCG00000048996 PPARGC1A (ENSSSCG00000029275) GBA3 (ENSSSCG00000008754) ADGRA3 (ENSSSCG00000008753) KCNIP4 (ENSSSCG00000023934) PACRGL (ENSSSCG00000008750) SLIT2 (ENSSSCG00000008749) Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253 #20 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 ENSGT00950000183003.a.a.a.b #36 Camelidae ANCESTRAL SPECIES 12 ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00940000160346.B ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00960000186682 ENSGT00910000148371 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000155145 #22 ENSGT00940000157675 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00940000155129.B ENSGT00530000063557.b ENSGT00390000015299.a.b.b.b ENSGT00940000155483 ENSGT00940000161857 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 204 PRR32 (ENSCDRG00005007478) ENSCDRG00005007467 ENSCDRG00005007403 ENSCDRG00005007387 TENM1 (ENSCDRG00005007282) #9 SH2D1A (ENSCDRG00005007229) #10 ENSCDRG00005007203 ENSCDRG00005007179 STAG2 (ENSCDRG00005007054) #12 ENSCDRG00005007002 XIAP (ENSCDRG00005006872) #13 THOC2 (ENSCDRG00005006591) #14 GRIA3 (ENSCDRG00005006337) #15 ENSCDRG00005006287 ENSCDRG00005006259 #20 C1GALT1C1 (ENSCDRG00005006244) #22 MCTS1 (ENSCDRG00005014524) #23 CUL4B (ENSCDRG00005014173) #24 LAMP2 (ENSCDRG00005014050) #25 ENSCDRG00005014026 ATP1B4 (ENSCDRG00005013852) #26 TMEM255A (ENSCDRG00005013662) #27 ZBTB33 (ENSCDRG00005013633) #28 NKAP (ENSCDRG00005013553) #30 ENSCDRG00005013519 ENSCDRG00005013504 NDUFA1 (ENSCDRG00005013461) #32 ENSCDRG00005013451 #33 UPF3B (ENSCDRG00005013350) #34 ENSCDRG00005013320 ##35 ENSCDRG00005013301 Arabian camel MODERN SPECIES 6 TMEM247 (ENSCDRG00005022306) EPAS1 (ENSCDRG00005022302) PRKCE (ENSCDRG00005022256) SRBD1 (ENSCDRG00005022191) SIX2 (ENSCDRG00005022173) SIX3 (ENSCDRG00005022157) CAMKMT (ENSCDRG00005022120) PREPL (ENSCDRG00005022007) SLC3A1 (ENSCDRG00005021956) PPM1B (ENSCDRG00005021937) ENSCDRG00005021934 LRPPRC (ENSCDRG00005021914) ABCG8 (ENSCDRG00005021896) ABCG5 (ENSCDRG00005021876) DYNC2LI1 (ENSCDRG00005021851) C1GALT1C1L (ENSCDRG00005021844) #22 PLEKHH2 (ENSCDRG00005021813) ENSCDRG00005021766 ENSCDRG00005021732 THADA (ENSCDRG00005021497) ZFP36L2 (ENSCDRG00005021403) HAAO (ENSCDRG00005021334) OXER1 (ENSCDRG00005021306) MTA3 (ENSCDRG00005021123) KCNG3 (ENSCDRG00005021049) ENSCDRG00005020976 EML4 (ENSCDRG00005020062) PKDCC (ENSCDRG00005019651) SLC8A1 (ENSCDRG00005018497) THUMPD2 (ENSCDRG00005017827) TMEM178A (ENSCDRG00005017644) Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 ENSGT00990000205098 ENSGT00950000183097.a.a.a ENSGT01050000244888.b.a.c.a ENSGT00940000159688 ENSGT00390000018873 ENSGT00940000154359.f ENSGT00940000157557 ENSGT00940000155658 ENSGT00940000160896 ENSGT01030000234522.C.b.e.a.b.i ENSGT00440000033329.b.a.b ENSGT00390000002253 #20 ENSGT00940000155145 #22 ENSGT00950000185370 ENSGT00940000160619 ENSGT00440000039314.b ENSGT00940000160686 ENSGT00940000154400.b ENSGT00390000002197 ENSGT00940000155075.a.b ENSGT00940000157256 ENSGT00940000158026 #37 ENSGT00950000183003.a.a.a.b #36 ENSGT00390000014814.b.lc #35 ENSGT00390000017146.a #34 ENSGT00390000016292.i.a #33 ENSGT00390000007560 #32 ENSGT00390000003444 #31 Pecora DUPLICATION Pecora ANCESTRAL SPECIES 28 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.f ENSGT00940000165384 ENSGT00940000161322.e ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00390000002253.c #20 ENSGT00940000155145.tb #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Yarkand deer MODERN SPECIES 1323 ACTRT1 (ENSCHYG00000025034) ENSCHYG00000025024 ENSCHYG00000025010 PRR32 (ENSCHYG00000024997) DCAF12L1 (ENSCHYG00000024989) DCAF12L2 (ENSCHYG00000024968) ENSCHYG00000024954 TENM1 (ENSCHYG00000018239) #9 SH2D1A (ENSCHYG00000017656) #10 STAG2 (ENSCHYG00000016931) #12 XIAP (ENSCHYG00000016805) #13 ENSCHYG00000016724 ENSCHYG00000016068 #14 GRIA3 (ENSCHYG00000015734) #15 ENSCHYG00000015665 #20 ENSCHYG00000015647 #22 MCTS1 (ENSCHYG00000015357) #23 CUL4B (ENSCHYG00000014824) #24 LAMP2 (ENSCHYG00000014639) #25 ENSCHYG00000014546 ATP1B4 (ENSCHYG00000014471) #26 TMEM255A (ENSCHYG00000014120) #27 ZBTB33 (ENSCHYG00000014073) #28 ENSCHYG00000014045 ENSCHYG00000014030 ENSCHYG00000013948 NKAP (ENSCHYG00000013797) #30 ENSCHYG00000013684 #31 ENSCHYG00000013639 #32 ENSCHYG00000013587 #33 UPF3B (ENSCHYG00000013449) #34 Percora_a ANCESTRAL SPECIES 30 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.f ENSGT00940000161322.e ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00990000204933 ENSGT00390000002253.c #20 ENSGT00940000155145.tb #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00950000184857 ENSGT00940000155295.o ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 Bovidae ANCESTRAL SPECIES 29 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.f ENSGT00940000161322.e ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.o #14 ENSGT00940000156123.b #15 ENSGT00990000204933 ENSGT00390000002253.c #20 ENSGT00940000155145.tb #22 ENSGT00550000074964.i.a #23 ENSGT00940000153883.a.g.b ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292.i.a #33 ENSGT00940000155295.o ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 Caprinae ANCESTRAL SPECIES 44 ENSGT00960000192752 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.e ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.o #14 ENSGT00940000156123.b #15 ENSGT00990000204933 ENSGT00390000002253.c #20 ENSGT00940000155145.tb #22 ENSGT00550000074964.i.a #23 ENSGT00940000153883.a.g.b ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00890000139472.h.b ENSGT00680000100018.a.b ENSGT00940000157904.d ENSGT00940000158972 ENSGT00940000157245 ENSGT00510000048543.i ENSGT00950000182897.B.a.b.a Goat MODERN SPECIES 30 ENSCHIG00000009926 ENSCHIG00000010106 ENSCHIG00000014765 ENSCHIG00000014537 ENSCHIG00000019138 ENSCHIG00000005776 ENSCHIG00000021441 TENM1 (ENSCHIG00000025645) #9 SH2D1A (ENSCHIG00000012378) #10 STAG2 (ENSCHIG00000025431) #12 XIAP (ENSCHIG00000011824) #13 ENSCHIG00000017733 #14 ENSCHIG00000017431 #20 GRIA3 (ENSCHIG00000026842) #15 ENSCHIG00000011319 ENSCHIG00000008443 #22 MCTS1 (ENSCHIG00000016396) #23 ENSCHIG00000009178 CUL4B (ENSCHIG00000021762) #24 ENSCHIG00000007472 LAMP2 (ENSCHIG00000012726) #25 ATP1B4 (ENSCHIG00000001251) #26 ENSCHIG00000019985 ZBTB33 (ENSCHIG00000015438) #28 ENSCHIG00000011618 ENSCHIG00000024429 ENSCHIG00000020678 STK26 (ENSCHIG00000016017) ENSCHIG00000011659 FRMD7 (ENSCHIG00000025596) RAP2C (ENSCHIG00000021486) Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020015821 PRR32 (ENSOARG00020015805) DCAF12L2 (ENSOARG00020015781) ENSOARG00020015761 ENSOARG00020023894 TENM1 (ENSOARG00020023417) #9 SH2D1A (ENSOARG00020023380) #10 STAG2 (ENSOARG00020022992) #12 XIAP (ENSOARG00020022858) #13 ENSOARG00020022466 #14 GRIA3 (ENSOARG00020022286) #15 ENSOARG00020022262 ENSOARG00020022245 ENSOARG00020022213 #20 ENSOARG00020022193 C1GALT1C1 (ENSOARG00020022174) #22 MCTS1 (ENSOARG00020022102) #23 ENSOARG00020022082 CUL4B (ENSOARG00020021896) #24 LAMP2 (ENSOARG00020021742) #25 ENSOARG00020021701 ATP1B4 (ENSOARG00020021596) #26 TMEM255A (ENSOARG00020021450) #27 ZBTB33 (ENSOARG00020021422) #28 ENSOARG00020021379 STK26 (ENSOARG00020021039) FRMD7 (ENSOARG00020020858) RAP2C (ENSOARG00020020747) ENSOARG00020020644 MBNL3 (ENSOARG00020020532) ENSOARG00020020493 Bovinae ANCESTRAL SPECIES 40 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000161322.f ENSGT00940000161322.e ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00390000005569.x.a.a.b ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.o #14 ENSGT00940000156123.b #15 ENSGT00390000002253.c #20 ENSGT00940000155145.tb #22 ENSGT00550000074964.i.a #23 ENSGT00940000153883.a.g.b ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.k #32 ENSGT00390000016292.i.a #33 ENSGT00940000155295.o ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 Bos ANCESTRAL SPECIES 39 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00940000162120.j ENSGT00940000161322.f.b.b ENSGT00940000161322.e ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000183069.b ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.o #14 ENSGT00940000156123.b #15 ENSGT00390000002253.c.b #20 ENSGT00940000155145.tb #22 ENSGT00550000074964.i.a #23 ENSGT00940000153883.a.g.b ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.k.a #32 ENSGT00390000016292.i.a #33 ENSGT00940000155295.o ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 Bos_a ANCESTRAL SPECIES 117 ENSGT00390000002253.c.a.b #20 ENSGT00940000155145.tb #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT00940000161768.B ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 Wild yak MODERN SPECIES 413 ENSBMUG00000022443 #20 ENSBMUG00000022458 #22 MCTS1 (ENSBMUG00000022484) #23 CUL4B (ENSBMUG00000022570) #24 LAMP2 (ENSBMUG00000022601) #25 ENSBMUG00000022609 ATP1B4 (ENSBMUG00000022633) #26 TMEM255A (ENSBMUG00000022674) #27 ZBTB33 (ENSBMUG00000022689) #28 Bos_b ANCESTRAL SPECIES 41 ENSGT00940000162120.j ENSGT00390000012726 ENSGT00940000161322.f.b.a ENSGT00940000161322.f.b.b ENSGT00940000161322.e ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000183069.b ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.o #14 ENSGT00940000156123.b #15 ENSGT00390000002253.c.b.a #20 ENSGT00390000002253.c.b.b #20 ENSGT00940000155145.tb #22 ENSGT00550000074964.i.a #23 ENSGT00940000153883.a.g.b ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00890000139472.h.b ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.k.a #32 ENSGT00390000016292.i.a #33 ENSGT00940000155295.o ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 Cow MODERN SPECIES 177 ENSBTAG00000000154 PRR32 (ENSBTAG00000008763) ENSBTAG00000054511 ENSBTAG00000054321 ENSBTAG00000022399 ENSBTAG00000046796 TENM1 (ENSBTAG00000018819) #9 SH2D1A (ENSBTAG00000026067) #10 ENSBTAG00000052925 STAG2 (ENSBTAG00000009121) #12 XIAP (ENSBTAG00000040350) #13 THOC2 (ENSBTAG00000008388) #14 GRIA3 (ENSBTAG00000011833) #15 CT47B1 (ENSBTAG00000049471) #20 ENSBTAG00000038497 #20 C1GALT1C1 (ENSBTAG00000021410) #22 MCTS1 (ENSBTAG00000034992) #23 CUL4B (ENSBTAG00000018569) #24 LAMP2 (ENSBTAG00000007399) #25 ATP1B4 (ENSBTAG00000008920) #26 TMEM255A (ENSBTAG00000017187) #27 ZBTB33 (ENSBTAG00000017184) #28 ENSBTAG00000006252 NKAP (ENSBTAG00000010884) #30 AKAP14 (ENSBTAG00000010881) #31 NDUFA1 (ENSBTAG00000006033) #32 RNF113A (ENSBTAG00000006034) #33 ENSBTAG00000047098 UPF3B (ENSBTAG00000035615) #34 RPL39 (ENSBTAG00000049833) ##35 SOWAHD (ENSBTAG00000046012) #36 Hybrid Bos Indicus MODERN SPECIES 315 TENM1 (ENSBIXG00005019874) #9 ENSBIXG00005019727 SH2D1A (ENSBIXG00005019713) #10 ENSBIXG00005019663 ENSBIXG00005019654 STAG2 (ENSBIXG00005003200) #12 XIAP (ENSBIXG00005003179) #13 ENSBIXG00005019462 #14 GRIA3 (ENSBIXG00005019227) #15 ENSBIXG00005005666 ENSBIXG00005019034 #20 ENSBIXG00005019025 #20 ENSBIXG00005019009 #20 ENSBIXG00005018987 #20 ENSBIXG00005018971 #20 ENSBIXG00005018941 #22 MCTS1 (ENSBIXG00005000064) #23 ENSBIXG00005018843 #24 ENSBIXG00005018794 LAMP2 (ENSBIXG00005018762) #25 ATP1B4 (ENSBIXG00005018658) #26 TMEM255A (ENSBIXG00005005989) #27 ZBTB33 (ENSBIXG00005005660) #28 ENSBIXG00005018482 ENSBIXG00005018477 NKAP (ENSBIXG00005018358) #30 ENSBIXG00005018343 #31 ENSBIXG00005018261 #32 ENSBIXG00005018249 #33 ENSBIXG00005007810 UPF3B (ENSBIXG00005002955) #34 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 273 DCAF12L2 (ENSMMSG00000007028) ENSMMSG00000007008 ENSMMSG00000006984 ENSMMSG00000006931 TENM1 (ENSMMSG00000006523) #9 SH2D1A (ENSMMSG00000006411) #10 ENSMMSG00000006378 STAG2 (ENSMMSG00000006216) #12 XIAP (ENSMMSG00000006180) #13 THOC2 (ENSMMSG00000006035) #14 GRIA3 (ENSMMSG00000005959) #15 ENSMMSG00000005927 ENSMMSG00000005912 #20 ENSMMSG00000005869 ENSMMSG00000005858 #22 MCTS1 (ENSMMSG00000005797) #23 ENSMMSG00000005753 ENSMMSG00000005741 CUL4B (ENSMMSG00000005610) #24 LAMP2 (ENSMMSG00000005501) #25 ENSMMSG00000005462 ATP1B4 (ENSMMSG00000005396) #26 TMEM255A (ENSMMSG00000005190) #27 ZBTB33 (ENSMMSG00000005143) #28 NKAP (ENSMMSG00000005109) #30 ENSMMSG00000005095 NDUFA1 (ENSMMSG00000005078) #32 ENSMMSG00000005059 #33 ENSMMSG00000005050 ENSMMSG00000005037 Siberian musk deer MODERN SPECIES 339 SH3GLB1 (ENSMMSG00000004787) SELENOF (ENSMMSG00000004702) HS2ST1 (ENSMMSG00000004654) LMO4 (ENSMMSG00000004595) ENSMMSG00000004549 PKN2 (ENSMMSG00000004478) ENSMMSG00000004441 KYAT3 (ENSMMSG00000004410) ENSMMSG00000004395 ENSMMSG00000004376 ENSMMSG00000004352 ENSMMSG00000004333 GBP2 (ENSMMSG00000021675) ENSMMSG00000021631 GBP5 (ENSMMSG00000021610) ENSMMSG00000021595 #22 GBP6 (ENSMMSG00000021568) LRRC8B (ENSMMSG00000021546) LRRC8C (ENSMMSG00000021530) LRRC8D (ENSMMSG00000021519) ZNF326 (ENSMMSG00000021471) BARHL2 (ENSMMSG00000021437) ZNF644 (ENSMMSG00000021384) ENSMMSG00000021360 HFM1 (ENSMMSG00000021206) CDC7 (ENSMMSG00000021156) TGFBR3 (ENSMMSG00000021111) BRDT (ENSMMSG00000021008) EPHX4 (ENSMMSG00000020965) ENSMMSG00000020851 ENSMMSG00000020824 Pecora ANCESTRAL SPECIES 8 ENSGT00940000160465 ENSGT00940000161729 ENSGT00730000111053 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00940000159812 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT00440000037505.a ENSGT01060000248589.B ENSGT01060000248592.C ENSGT01060000248592.D ENSGT01060000248592.B ENSGT01060000248592.E ENSGT00940000158290 ENSGT00940000155145.ub #22 ENSGT00940000161405.h ENSGT00940000155975.p ENSGT00940000161405.g ENSGT00940000155975.o.a ENSGT00940000155975.o.b ENSGT01030000234621.A ENSGT00950000182897.B.a.a ENSGT00900000143541 ENSGT01030000234621.B ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 Percora_a ANCESTRAL SPECIES 7 ENSGT00940000160465 ENSGT00940000161729 ENSGT00730000111053 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00940000159812 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT00440000037505.a ENSGT01060000248589.B ENSGT01060000248592.C ENSGT01060000248592.D ENSGT01060000248592.B ENSGT01060000248592.E ENSGT00940000158290 ENSGT00940000155145.ub #22 ENSGT00940000161405.h ENSGT00940000161405.g ENSGT00940000155975.p ENSGT00940000155975.o.a ENSGT00940000155975.o.b ENSGT01030000234621.A ENSGT00950000182897.B.a.a ENSGT00900000143541 ENSGT01030000234621.B ENSGT00940000160283 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 Bovidae ANCESTRAL SPECIES 9 ENSGT00940000160465 ENSGT00940000161729 ENSGT00730000111053 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00940000159812 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT00440000037505.a ENSGT01060000248589.B ENSGT01060000248592.C ENSGT01060000248592.D ENSGT01060000248592.B ENSGT01060000248592.E ENSGT00940000158290 ENSGT00940000155145.ub #22 ENSGT00940000161405.h ENSGT00940000161405.g ENSGT00940000155975.p ENSGT00940000155975.o.a ENSGT00940000155975.o.b ENSGT01030000234621.A ENSGT00950000182897.B.a.a ENSGT00900000143541 ENSGT01030000234621.B ENSGT00940000160283 ENSGT00710000106792.p #14 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 Caprinae ANCESTRAL SPECIES 8 ENSGT00940000160465 ENSGT00940000161729 ENSGT00730000111053 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00940000159812 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248592.C ENSGT01060000248592.D ENSGT01060000248592.B ENSGT01060000248592.E ENSGT00440000037505.a ENSGT00940000158290 ENSGT00940000155145.ub #22 ENSGT00940000161405.g ENSGT00940000155975.p ENSGT00940000155975.o.a ENSGT01030000234621.A ENSGT00950000182897.B.a.a ENSGT00900000143541 ENSGT01030000234621.B ENSGT00940000160283 ENSGT00710000106792.p #14 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00940000156745 ENSGT00940000166505 ENSGT00940000157185 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES TSC22D2 (ENSOARG00020004814) SERP1 (ENSOARG00020004753) EIF2A (ENSOARG00020004612) SELENOT (ENSOARG00020004562) ERICH6 (ENSOARG00020004497) SIAH2 (ENSOARG00020004480) MINDY4B (ENSOARG00020004426) CLRN1 (ENSOARG00020004410) GPR171 (ENSOARG00020004396) P2RY14 (ENSOARG00020004387) GPR87 (ENSOARG00020004364) P2RY13 (ENSOARG00020004346) P2RY12 (ENSOARG00020004333) MED12L (ENSOARG00020003807) ENSOARG00020003749 ENSOARG00020003743 #22 ENSOARG00020003670 ENSOARG00020003641 ENSOARG00020003630 #22 MBNL1 (ENSOARG00020003112) P2RY1 (ENSOARG00020002995) RAP2B (ENSOARG00020002980) ENSOARG00020002971 #14 ARHGEF26 (ENSOARG00020002906) DHX36 (ENSOARG00020002569) GPR149 (ENSOARG00020002480) MME (ENSOARG00020002391) STRIT1 (ENSOARG00020002364) PLCH1 (ENSOARG00020002177) C3orf33 (ENSOARG00020002111) SLC33A1 (ENSOARG00020002067) Rambouillet Sheep MODERN SPECIES SELENOT (ENSOARG00020004562) ERICH6 (ENSOARG00020004497) SIAH2 (ENSOARG00020004480) MINDY4B (ENSOARG00020004426) CLRN1 (ENSOARG00020004410) GPR171 (ENSOARG00020004396) P2RY14 (ENSOARG00020004387) GPR87 (ENSOARG00020004364) P2RY13 (ENSOARG00020004346) P2RY12 (ENSOARG00020004333) MED12L (ENSOARG00020003807) ENSOARG00020003749 ENSOARG00020003743 #22 ENSOARG00020003670 ENSOARG00020003641 ENSOARG00020003630 #22 MBNL1 (ENSOARG00020003112) P2RY1 (ENSOARG00020002995) RAP2B (ENSOARG00020002980) ENSOARG00020002971 #14 ARHGEF26 (ENSOARG00020002906) DHX36 (ENSOARG00020002569) GPR149 (ENSOARG00020002480) MME (ENSOARG00020002391) STRIT1 (ENSOARG00020002364) PLCH1 (ENSOARG00020002177) C3orf33 (ENSOARG00020002111) SLC33A1 (ENSOARG00020002067) GMPS (ENSOARG00020001873) ENSOARG00020001823 KCNAB1 (ENSOARG00020001172) Goat MODERN SPECIES ENSCHIG00000022037 TSC22D2 (ENSCHIG00000015207) SERP1 (ENSCHIG00000026085) EIF2A (ENSCHIG00000023786) SELENOT (ENSCHIG00000017283) ERICH6 (ENSCHIG00000026779) SIAH2 (ENSCHIG00000015530) CLRN1 (ENSCHIG00000010327) GPR171 (ENSCHIG00000008552) P2RY14 (ENSCHIG00000007322) GPR87 (ENSCHIG00000026625) P2RY13 (ENSCHIG00000008059) P2RY12 (ENSCHIG00000021785) MED12L (ENSCHIG00000014066) IGSF10 (ENSCHIG00000025273) ENSCHIG00000010504 #22 AADACL2 (ENSCHIG00000025374) ENSCHIG00000013704 ENSCHIG00000020191 SUCNR1 (ENSCHIG00000008127) ENSCHIG00000024419 MBNL1 (ENSCHIG00000019308) ENSCHIG00000019221 P2RY1 (ENSCHIG00000008918) RAP2B (ENSCHIG00000011695) ENSCHIG00000025851 #14 ARHGEF26 (ENSCHIG00000012613) DHX36 (ENSCHIG00000017463) GPR149 (ENSCHIG00000005003) ENSCHIG00000017243 MME (ENSCHIG00000018324) Bovinae ANCESTRAL SPECIES 6 ENSGT00940000160465 ENSGT00940000161729 ENSGT00730000111053 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00940000159812 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT00440000037505.a ENSGT01060000248589.B ENSGT01060000248592.C ENSGT01060000248592.D ENSGT01060000248592.B ENSGT01060000248592.E ENSGT00940000158290 ENSGT00940000155145.ub #22 ENSGT00940000161405.h ENSGT00940000161405.g ENSGT00940000155975.p ENSGT00940000155975.o.a ENSGT00940000155975.o.b ENSGT01030000234621.A ENSGT00950000182897.B.a.a ENSGT01030000234621.B ENSGT00940000160283 ENSGT00710000106792.p #14 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00390000013771.f.a.b ENSGT00940000156745 Bos ANCESTRAL SPECIES 7 ENSGT00940000160465 ENSGT00940000161729 ENSGT00730000111053 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00940000159812 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248592.C ENSGT01060000248592.D ENSGT01060000248592.B ENSGT01060000248592.E ENSGT00440000037505.a ENSGT00940000158290 ENSGT00940000155145.ub #22 ENSGT00940000161405.h ENSGT00940000161405.g ENSGT00940000155975.p ENSGT00940000155975.o.a ENSGT00940000155975.o.b ENSGT01030000234621.A ENSGT00950000182897.B.a.a ENSGT00390000009588.pb.a.a.a ENSGT01030000234621.B ENSGT00940000160283 ENSGT00710000106792.p #14 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00390000013771.f.a.b Bos_a ANCESTRAL SPECIES 5 ENSGT00940000160465 ENSGT00940000161729 ENSGT00730000111053 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00940000159812 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT00440000037505.a ENSGT01060000248589.B ENSGT01060000248592.C ENSGT01060000248592.D ENSGT01060000248592.B ENSGT01060000248592.E ENSGT00940000158290 ENSGT00940000155145.ub #22 ENSGT00940000161405.g ENSGT00940000155975.p ENSGT00940000155975.o.a ENSGT00940000155975.o.b ENSGT01030000234621.A ENSGT00950000182897.B.a.a ENSGT00390000009588.pb.a.a.a ENSGT01030000234621.B ENSGT00940000160283 ENSGT00710000106792.p #14 ENSGT01030000234571.a.a ENSGT00940000156903 ENSGT00390000003715 ENSGT00390000013771.f.a.b ENSGT00940000156745 Domestic yak MODERN SPECIES ENSBGRG00000015114 EIF2A (ENSBGRG00000014873) SELENOT (ENSBGRG00000014779) ERICH6 (ENSBGRG00000014731) ENSBGRG00000014713 SIAH2 (ENSBGRG00000014649) MINDY4B (ENSBGRG00000014520) CLRN1 (ENSBGRG00000014449) GPR171 (ENSBGRG00000014427) P2RY14 (ENSBGRG00000014410) GPR87 (ENSBGRG00000014373) P2RY13 (ENSBGRG00000014357) P2RY12 (ENSBGRG00000014296) MED12L (ENSBGRG00000014050) IGSF10 (ENSBGRG00000013927) C1GALT1C1 (ENSBGRG00000013878) #22 AADACL2 (ENSBGRG00000013837) ENSBGRG00000013789 ENSBGRG00000013712 ENSBGRG00000013621 SUCNR1 (ENSBGRG00000013608) MBNL1 (ENSBGRG00000012526) ENSBGRG00000012450 ENSBGRG00000012435 P2RY1 (ENSBGRG00000012398) ENSBGRG00000012278 #14 ENSBGRG00000012249 ARHGEF26 (ENSBGRG00000011886) DHX36 (ENSBGRG00000010375) GPR149 (ENSBGRG00000010222) ENSBGRG00000010202 Wild yak MODERN SPECIES 1707 ENSBMUG00000021897 SERP1 (ENSBMUG00000021889) EIF2A (ENSBMUG00000021818) SELENOT (ENSBMUG00000021745) ERICH6 (ENSBMUG00000021729) SIAH2 (ENSBMUG00000021709) MINDY4B (ENSBMUG00000021690) CLRN1 (ENSBMUG00000021661) GPR171 (ENSBMUG00000021638) P2RY14 (ENSBMUG00000021623) GPR87 (ENSBMUG00000021604) P2RY13 (ENSBMUG00000021587) P2RY12 (ENSBMUG00000021583) MED12L (ENSBMUG00000021531) IGSF10 (ENSBMUG00000021426) ENSBMUG00000021415 #22 ENSBMUG00000021403 Bos_b ANCESTRAL SPECIES 5 ENSGT00940000160465 ENSGT00940000161729 ENSGT00730000111053 ENSGT00390000011725.d ENSGT00940000153655.A.b ENSGT00940000159812 ENSGT00940000162644 ENSGT00850000132319.a.a.a ENSGT01060000248589.B ENSGT01060000248592.C ENSGT01060000248592.D ENSGT01060000248592.B ENSGT01060000248592.E ENSGT00440000037505.a ENSGT00940000158290 ENSGT00940000155145.ub #22 ENSGT00940000161405.h ENSGT00940000161405.g ENSGT00940000155975.p ENSGT00940000155975.o.a ENSGT00940000155975.o.b ENSGT01030000234621.A ENSGT00950000182897.B.a.a ENSGT00390000009588.pb.a.a.a ENSGT01030000234621.B ENSGT00940000160283 ENSGT00710000106792.p #14 ENSGT00940000163420 ENSGT00940000156903 ENSGT00390000003715 ENSGT00390000013771.f.a.b Cow MODERN SPECIES RNF13 (ENSBTAG00000011147) PFN2 (ENSBTAG00000011150) TSC22D2 (ENSBTAG00000018402) SERP1 (ENSBTAG00000009104) EIF2A (ENSBTAG00000009106) SELENOT (ENSBTAG00000031435) ERICH6 (ENSBTAG00000001331) SIAH2 (ENSBTAG00000023445) CLRN1 (ENSBTAG00000011267) GPR171 (ENSBTAG00000009848) P2RY14 (ENSBTAG00000020990) GPR87 (ENSBTAG00000011192) P2RY12 (ENSBTAG00000015837) MED12L (ENSBTAG00000021703) IGSF10 (ENSBTAG00000001728) ENSBTAG00000010385 #22 ENSBTAG00000050232 ENSBTAG00000013378 ENSBTAG00000050308 AADAC (ENSBTAG00000011569) ENSBTAG00000049884 SUCNR1 (ENSBTAG00000053581) MBNL1 (ENSBTAG00000004564) ENSBTAG00000033740 P2RY1 (ENSBTAG00000001465) RAP2B (ENSBTAG00000055257) ENSBTAG00000047341 #14 ARHGEF26 (ENSBTAG00000013439) DHX36 (ENSBTAG00000006142) GPR149 (ENSBTAG00000006147) ENSBTAG00000024623 Hybrid Bos Indicus MODERN SPECIES EIF2A (ENSBIXG00005009363) ENSBIXG00005009431 SELENOT (ENSBIXG00005009398) ERICH6 (ENSBIXG00005009455) SIAH2 (ENSBIXG00005009475) MINDY4B (ENSBIXG00005006312) CLRN1 (ENSBIXG00005009526) GPR171 (ENSBIXG00005009548) P2RY14 (ENSBIXG00005000537) GPR87 (ENSBIXG00005009568) P2RY13 (ENSBIXG00005009574) P2RY12 (ENSBIXG00005000542) ENSBIXG00005009589 MED12L (ENSBIXG00005009622) IGSF10 (ENSBIXG00005007519) ENSBIXG00005009702 #22 AADACL2 (ENSBIXG00005009732) ENSBIXG00005007417 ENSBIXG00005006099 ENSBIXG00005009787 SUCNR1 (ENSBIXG00005006769) MBNL1 (ENSBIXG00005009946) ENSBIXG00005009997 P2RY1 (ENSBIXG00005010036) ENSBIXG00005010071 RAP2B (ENSBIXG00005000777) ENSBIXG00005010090 #14 ENSBIXG00005010192 DHX36 (ENSBIXG00005010428) GPR149 (ENSBIXG00005010478) ENSBIXG00005010519 American bison MODERN SPECIES 2980 ENSBBBG00000024022 SERP1 (ENSBBBG00000006244) EIF2A (ENSBBBG00000023983) SELENOT (ENSBBBG00000023840) ERICH6 (ENSBBBG00000006203) MINDY4B (ENSBBBG00000023787) CLRN1 (ENSBBBG00000023776) MED12L (ENSBBBG00000023738) GPR171 (ENSBBBG00000023521) P2RY14 (ENSBBBG00000023513) GPR87 (ENSBBBG00000023509) P2RY13 (ENSBBBG00000006141) P2RY12 (ENSBBBG00000023493) IGSF10 (ENSBBBG00000023486) ENSBBBG00000023465 #22 AADACL2 (ENSBBBG00000023437) ENSBBBG00000023374 ENSBBBG00000006110 SUCNR1 (ENSBBBG00000006108) MBNL1 (ENSBBBG00000023308) ENSBBBG00000023056 P2RY1 (ENSBBBG00000023042) RAP2B (ENSBBBG00000008848) ENSBBBG00000006038 #14 Siberian musk deer MODERN SPECIES 1183 ENSMMSG00000017862 SERP1 (ENSMMSG00000017816) EIF2A (ENSMMSG00000017621) SELENOT (ENSMMSG00000017585) ERICH6 (ENSMMSG00000017518) SIAH2 (ENSMMSG00000017488) MINDY4B (ENSMMSG00000017410) CLRN1 (ENSMMSG00000017388) GPR171 (ENSMMSG00000017372) P2RY14 (ENSMMSG00000017364) GPR87 (ENSMMSG00000017348) P2RY13 (ENSMMSG00000017341) P2RY12 (ENSMMSG00000017329) MED12L (ENSMMSG00000016328) IGSF10 (ENSMMSG00000016251) ENSMMSG00000016237 #22 ENSMMSG00000016156 ENSMMSG00000016067 ENSMMSG00000016030 ENSMMSG00000016002 ENSMMSG00000015969 SUCNR1 (ENSMMSG00000015945) MBNL1 (ENSMMSG00000015435) P2RY1 (ENSMMSG00000015380) ENSMMSG00000015354 RAP2B (ENSMMSG00000015344) ENSMMSG00000015319 ENSMMSG00000015280 DHX36 (ENSMMSG00000014726) GPR149 (ENSMMSG00000014655) ENSMMSG00000014648 Yarkand deer MODERN SPECIES 10 ENSCHYG00000009465 TSC22D2 (ENSCHYG00000009315) SERP1 (ENSCHYG00000009230) EIF2A (ENSCHYG00000009006) SELENOT (ENSCHYG00000008902) ERICH6 (ENSCHYG00000008767) SIAH2 (ENSCHYG00000008744) MINDY4B (ENSCHYG00000008658) CLRN1 (ENSCHYG00000008640) GPR171 (ENSCHYG00000008623) P2RY14 (ENSCHYG00000008597) GPR87 (ENSCHYG00000008581) P2RY13 (ENSCHYG00000008568) MED12L (ENSCHYG00000008500) IGSF10 (ENSCHYG00000008469) ENSCHYG00000008458 #22 AADACL2 (ENSCHYG00000008371) ENSCHYG00000008329 ENSCHYG00000008311 SUCNR1 (ENSCHYG00000008303) MBNL1 (ENSCHYG00000007632) P2RY1 (ENSCHYG00000007564) RAP2B (ENSCHYG00000007516) ARHGEF26 (ENSCHYG00000007452) DHX36 (ENSCHYG00000007110) GPR149 (ENSCHYG00000007062) MME (ENSCHYG00000006865) ENSCHYG00000006823 PLCH1 (ENSCHYG00000006524) C3orf33 (ENSCHYG00000006450) SLC33A1 (ENSCHYG00000006374) Cetacea ANCESTRAL SPECIES 19 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT01010000226498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339.q #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560.o.b #32 ENSGT00390000016292.i.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Odontoceti ANCESTRAL SPECIES 19 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT01010000226498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT01100000263991.b ENSGT00940000155339.q #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560.o.b #32 ENSGT00390000016292.i.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b.lc #35 ENSGT00390000014814.a.a.b ##35 ENSGT00950000183003.a.a.a.b #36 Odontoceti_a ANCESTRAL SPECIES 21 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT01010000226498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT01100000263991.b ENSGT00940000155339.q #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560.o.b #32 ENSGT00390000016292.i.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.a.a.b ##35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT01010000226498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT01100000263991.b ENSGT00940000155339.q #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787.a #30 ENSGT00390000007560.o.b #32 ENSGT00390000016292.i.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.a.a.b ##35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Vaquita MODERN SPECIES 34 ENSPSNG00000019998 ENSPSNG00000019967 PRR32 (ENSPSNG00000019940) DCAF12L1 (ENSPSNG00000019924) DCAF12L2 (ENSPSNG00000019910) ENSPSNG00000019888 TENM1 (ENSPSNG00000019528) #9 SH2D1A (ENSPSNG00000019428) #10 STAG2 (ENSPSNG00000019195) #12 XIAP (ENSPSNG00000019138) #13 THOC2 (ENSPSNG00000018864) #14 GRIA3 (ENSPSNG00000018786) #15 ENSPSNG00000018741 ENSPSNG00000018728 ENSPSNG00000018684 C1GALT1C1 (ENSPSNG00000018655) #22 MCTS1 (ENSPSNG00000018563) #23 ENSPSNG00000018501 ENSPSNG00000017563 #24 LAMP2 (ENSPSNG00000017367) #25 ATP1B4 (ENSPSNG00000017092) #26 TMEM255A (ENSPSNG00000016965) #27 ZBTB33 (ENSPSNG00000016921) #28 ENSPSNG00000016789 #30 NDUFA1 (ENSPSNG00000016731) #32 ENSPSNG00000016705 #33 UPF3B (ENSPSNG00000016634) #34 SOWAHD (ENSPSNG00000016554) #36 SEPTIN6 (ENSPSNG00000016410) #37 NKRF (ENSPSNG00000016268) UBE2A (ENSPSNG00000016113) Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000157996 ENSGT00940000157297 ENSGT00940000162451 ENSGT00390000012726 ENSGT00940000165384 ENSGT00940000161322 ENSGT00940000161768.A ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.b ENSGT01010000226498 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339.q #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00910000148149 ENSGT00940000157481 #28 ENSGT00940000160787.a #30 ENSGT00390000007560.o.b #32 ENSGT00390000016292.i.a.a #33 ENSGT00390000017146.a #34 ENSGT00390000014814.a.a.b ##35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256.c Narwhal MODERN SPECIES 309 SMARCA1 (ENSMMNG00015019149) ACTRT1 (ENSMMNG00015019112) PRR32 (ENSMMNG00015019091) DCAF12L1 (ENSMMNG00015019080) DCAF12L2 (ENSMMNG00015019063) ENSMMNG00015019048 TENM1 (ENSMMNG00015018845) #9 ENSMMNG00015018755 #10 STAG2 (ENSMMNG00015018556) #12 XIAP (ENSMMNG00015018503) #13 THOC2 (ENSMMNG00015018310) #14 GRIA3 (ENSMMNG00015018223) #15 ENSMMNG00015018183 ENSMMNG00015018156 ENSMMNG00015018133 C1GALT1C1 (ENSMMNG00015018118) #22 MCTS1 (ENSMMNG00015018056) #23 CUL4B (ENSMMNG00015017840) #24 LAMP2 (ENSMMNG00015017731) #25 ATP1B4 (ENSMMNG00015017630) #26 TMEM255A (ENSMMNG00015017476) #27 ENSMMNG00015017438 ZBTB33 (ENSMMNG00015017422) #28 ENSMMNG00015017371 #30 ENSMMNG00015017340 #32 ENSMMNG00015017331 #33 UPF3B (ENSMMNG00015017288) #34 ENSMMNG00015017247 ##35 SOWAHD (ENSMMNG00015017238) #36 SEPTIN6 (ENSMMNG00015017135) #37 ENSMMNG00015017057 Sperm whale MODERN SPECIES 13 SMARCA1 (ENSPCTG00005013285) PRR32 (ENSPCTG00005013220) DCAF12L1 (ENSPCTG00005013200) DCAF12L2 (ENSPCTG00005013175) ENSPCTG00005013125 TENM1 (ENSPCTG00005012483) #9 SH2D1A (ENSPCTG00005012370) #10 ENSPCTG00005012335 STAG2 (ENSPCTG00005021957) #12 ENSPCTG00005021944 XIAP (ENSPCTG00005021934) #13 THOC2 (ENSPCTG00005021828) #14 GRIA3 (ENSPCTG00005021790) #15 ENSPCTG00005021769 ENSPCTG00005021761 C1GALT1C1 (ENSPCTG00005021756) #22 MCTS1 (ENSPCTG00005021726) #23 ENSPCTG00005021706 CUL4B (ENSPCTG00005021625) #24 LAMP2 (ENSPCTG00005021587) #25 ATP1B4 (ENSPCTG00005021520) #26 TMEM255A (ENSPCTG00005021498) #27 ENSPCTG00005021487 ENSPCTG00005021481 #28 ENSPCTG00005021469 #28 NDUFA1 (ENSPCTG00005021450) #32 RNF113A (ENSPCTG00005021437) #33 UPF3B (ENSPCTG00005021412) #34 RPL39 (ENSPCTG00005021386) #35 GMPR2 (ENSPCTG00005021379) ##35 SOWAHD (ENSPCTG00005021365) #36 Blue whale MODERN SPECIES 40 SMARCA1 (ENSBMSG00010018032) PRR32 (ENSBMSG00010017971) DCAF12L1 (ENSBMSG00010017963) DCAF12L2 (ENSBMSG00010017949) TENM1 (ENSBMSG00010017660) #9 SH2D1A (ENSBMSG00010017571) #10 ENSBMSG00010017551 STAG2 (ENSBMSG00010017507) #12 ENSBMSG00010017479 ENSBMSG00010017462 XIAP (ENSBMSG00010017439) #13 THOC2 (ENSBMSG00010017313) #14 GRIA3 (ENSBMSG00010017249) #15 ENSBMSG00010017208 ENSBMSG00010017184 C1GALT1C1 (ENSBMSG00010017176) #22 MCTS1 (ENSBMSG00010017130) #23 ENSBMSG00010017101 CUL4B (ENSBMSG00010017007) #24 LAMP2 (ENSBMSG00010016949) #25 ATP1B4 (ENSBMSG00010016771) #26 TMEM255A (ENSBMSG00010021570) #27 ZBTB33 (ENSBMSG00010021554) #28 NKAP (ENSBMSG00010021536) #30 ENSBMSG00010021529 #31 ENSBMSG00010021521 #32 ENSBMSG00010021519 #33 UPF3B (ENSBMSG00010021508) #34 ENSBMSG00010021497 #35 SOWAHD (ENSBMSG00010021486) #36 SEPTIN6 (ENSBMSG00010021435) #37 Atlantogenata ANCESTRAL SPECIES 14 ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00940000158292.a ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00390000016775 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000157675 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00940000155129.B ENSGT00530000063557.b ENSGT00390000015299.a.b.b.b ENSGT00940000155483 ENSGT00940000161857 ENSGT00940000155423 Xenarthra ANCESTRAL SPECIES 1522 ENSGT00940000155145 #22 ENSGT00550000074964.i.a #23 ENSGT00940000155339 #24 Armadillo DUPLICATION Armadillo MODERN SPECIES 3824 C1GALT1C1 (ENSDNOG00000003697) #22 MCTS1 (ENSDNOG00000046770) #23 CUL4B (ENSDNOG00000012663) #24 ENSDNOG00000034524 Armadillo MODERN SPECIES 355 PRKCE (ENSDNOG00000048651) ENSDNOG00000038824 SRBD1 (ENSDNOG00000018686) SIX2 (ENSDNOG00000018725) CAMKMT (ENSDNOG00000044307) ENSDNOG00000000193 ENSDNOG00000012230 PREPL (ENSDNOG00000025378) ENSDNOG00000046304 SLC3A1 (ENSDNOG00000031447) ENSDNOG00000034472 PPM1B (ENSDNOG00000009468) ENSDNOG00000012594 ABCG8 (ENSDNOG00000049689) ABCG5 (ENSDNOG00000012558) C1GALT1C1L (ENSDNOG00000032389) #22 PLEKHH2 (ENSDNOG00000012497) THADA (ENSDNOG00000012440) ZFP36L2 (ENSDNOG00000043725) Afrotheria ANCESTRAL SPECIES 39 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00390000016775 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000157675 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00940000155129.B ENSGT00530000063557.b ENSGT00390000015299.a.b.b.b ENSGT00940000155483 ENSGT00940000161857 ENSGT00940000155423 Tenrec MODERN SPECIES 8958 C1GALT1C1L (ENSETEG00000018702) #22 PLEKHH2 (ENSETEG00000018693) Afrotheria_a ANCESTRAL SPECIES 36 ENSGT00390000002730.c.b ENSGT00390000002879 ENSGT00940000155930 ENSGT00940000154711 ENSGT00510000047850 ENSGT00390000002168 ENSGT00530000063426.a ENSGT00940000158103 ENSGT00940000156070.a.a ENSGT00390000016775 ENSGT00940000159739 ENSGT00940000157985 ENSGT00390000010498 ENSGT00940000157675 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00390000015500 ENSGT00940000161584 ENSGT00390000013008 ENSGT00990000203619.A.b.b.b.a ENSGT01030000234573.B.c.b.a ENSGT00940000159658 ENSGT00940000154815.a ENSGT00940000158434 ENSGT00390000001205.a ENSGT00940000155129.B ENSGT00530000063557.b ENSGT00390000015299.a.b.b.b ENSGT00940000155483 ENSGT00940000161857 ENSGT00940000155423 Hyrax MODERN SPECIES 11533 C1GALT1C1 (ENSPCAG00000000011) #22 Elephant DUPLICATION Elephant MODERN SPECIES 320 APLN (ENSLAFG00000029857) OCRL (ENSLAFG00000000900) SMARCA1 (ENSLAFG00000000896) ENSLAFG00000028410 ENSLAFG00000029392 ENSLAFG00000009629 ENSLAFG00000032003 ENSLAFG00000030159 TENM1 (ENSLAFG00000007987) #9 SH2D1A (ENSLAFG00000007985) #10 STAG2 (ENSLAFG00000006860) #12 XIAP (ENSLAFG00000013707) #13 THOC2 (ENSLAFG00000003146) #14 ENSLAFG00000028240 GRIA3 (ENSLAFG00000011674) #15 C1GALT1C1 (ENSLAFG00000015273) #22 MCTS1 (ENSLAFG00000015272) #23 CUL4B (ENSLAFG00000015257) #24 LAMP2 (ENSLAFG00000016108) #25 ENSLAFG00000031620 ATP1B4 (ENSLAFG00000003704) #26 TMEM255A (ENSLAFG00000015538) #27 ZBTB33 (ENSLAFG00000004366) #28 NKAP (ENSLAFG00000002962) #30 ENSLAFG00000002960 NDUFA1 (ENSLAFG00000013910) #32 ENSLAFG00000013906 #33 UPF3B (ENSLAFG00000001267) #34 SOWAHD (ENSLAFG00000005269) #36 SEPTIN6 (ENSLAFG00000021387) #37 NKRF (ENSLAFG00000027138) Elephant MODERN SPECIES 376 ENSLAFG00000025913 ENSLAFG00000026927 ENSLAFG00000004190 ENSLAFG00000032688 CAMKMT (ENSLAFG00000018102) PREPL (ENSLAFG00000018092) SLC3A1 (ENSLAFG00000018087) PPM1B (ENSLAFG00000010003) ENSLAFG00000008614 ABCG8 (ENSLAFG00000008607) ENSLAFG00000008602 DYNC2LI1 (ENSLAFG00000008595) C1GALT1C1L (ENSLAFG00000032439) #22 PLEKHH2 (ENSLAFG00000008584) THADA (ENSLAFG00000004268) ZFP36L2 (ENSLAFG00000004265) HAAO (ENSLAFG00000025646) OXER1 (ENSLAFG00000004844) MTA3 (ENSLAFG00000004841) KCNG3 (ENSLAFG00000030054) COX7A2L (ENSLAFG00000022050) EML4 (ENSLAFG00000023296) PKDCC (ENSLAFG00000026376) ENSLAFG00000001063 ENSLAFG00000027797 ENSLAFG00000005383 ENSLAFG00000029951 TMEM178A (ENSLAFG00000005380) Marsupialia ANCESTRAL SPECIES 30 ENSGT00390000008142.c ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996.c ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000160311.e ENSGT00940000153773.a.b ENSGT00940000155145 #22 ENSGT00550000074964.j ##23 ENSGT00940000155339.bb #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000016292 #33 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256.a Marsupialia_b ANCESTRAL SPECIES 29 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996.c ENSGT00940000157297 ENSGT00940000160311.f ENSGT01000000214434.B.b.d ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792.q #14 ENSGT00940000156123.b #15 ENSGT00940000160311.e ENSGT00940000153773.a.b ENSGT00940000155145 #22 ENSGT00550000074964.j ##23 ENSGT00940000155339.bb #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000016292.l #33 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256.a ENSGT00940000155075.a.b Diprotodontia ANCESTRAL SPECIES 86 ENSGT00940000155145 #22 ENSGT00550000074964.j ##23 ENSGT00940000155339.bb #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000016292.l #33 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00940000158026 #37 ENSGT00940000157256.a ENSGT00940000155075.a.b ENSGT00390000002197 Diprotodontia_a ANCESTRAL SPECIES 85 ENSGT00940000153352.B.n ENSGT00940000155145 #22 ENSGT00550000074964.j ##23 ENSGT00940000155339.bb #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000016292.l #33 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00940000158026 #37 ENSGT00940000157256.a ENSGT00940000155075.a.b ENSGT00390000002197 koala MODERN SPECIES 266 ENSPCIG00000009693 ENSPCIG00000018381 #22 ENSPCIG00000031529 ##23 CUL4B (ENSPCIG00000028926) #24 LAMP2 (ENSPCIG00000028925) #25 ATP1B4 (ENSPCIG00000028923) #26 TMEM255A (ENSPCIG00000036286) #27 ZBTB33 (ENSPCIG00000028921) #28 ENSPCIG00000028920 #30 ENSPCIG00000028918 #31 ENSPCIG00000028916 #33 ENSPCIG00000028917 #32 UPF3B (ENSPCIG00000028914) #34 SEPTIN6 (ENSPCIG00000028910) #37 UBE2A (ENSPCIG00000028906) STEEP1 (ENSPCIG00000028904) SLC25A43 (ENSPCIG00000028902) Common wonbat MODERN SPECIES 1005 ENSVURG00010015070 ENSVURG00010015059 #22 ENSVURG00010015051 ##23 ENSVURG00010014998 #24 LAMP2 (ENSVURG00010014981) #25 ATP1B4 (ENSVURG00010014941) #26 TMEM255A (ENSVURG00010014897) #27 ZBTB33 (ENSVURG00010014885) #28 NDUFA1 (ENSVURG00010014879) #32 ENSVURG00010014874 #33 UPF3B (ENSVURG00010014871) #34 SEPTIN6 (ENSVURG00010014834) #37 ENSVURG00010014825 UBE2A (ENSVURG00010014805) STEEP1 (ENSVURG00010014795) SLC25A43 (ENSVURG00010014774) PGRMC1 (ENSVURG00010014758) Tasmanian devil MODERN SPECIES 21 APLN (ENSSHAG00000030970) ENSSHAG00000014095 ENSSHAG00000013518 ENSSHAG00000020714 ENSSHAG00000023403 ENSSHAG00000028121 ENSSHAG00000018884 ENSSHAG00000028961 ENSSHAG00000017155 #9 SH2D1A (ENSSHAG00000022316) #10 STAG2 (ENSSHAG00000016662) #12 XIAP (ENSSHAG00000016328) #13 ENSSHAG00000015987 #14 GRIA3 (ENSSHAG00000014951) #15 ENSSHAG00000000511 ENSSHAG00000025372 #22 ENSSHAG00000011426 #24 LAMP2 (ENSSHAG00000010966) #25 ATP1B4 (ENSSHAG00000010668) #26 TMEM255A (ENSSHAG00000009820) #27 ZBTB33 (ENSSHAG00000009770) #28 ENSSHAG00000009115 #30 ENSSHAG00000009019 #31 ENSSHAG00000008839 #33 ENSSHAG00000020652 #32 UPF3B (ENSSHAG00000008634) #34 ENSSHAG00000028847 #36 SEPTIN6 (ENSSHAG00000007460) #37 ENSSHAG00000006903 UBE2A (ENSSHAG00000023487) ENSSHAG00000006319 Platypus MODERN SPECIES 17 COL4A5 (ENSOANG00000001275) ENSOANG00000038357 COL4A6 (ENSOANG00000001272) ATG4A (ENSOANG00000009658) PSMD10 (ENSOANG00000045915) ENSOANG00000013071 RAB39B (ENSOANG00000041634) ENSOANG00000001267 GAB3 (ENSOANG00000013072) SMARCA1 (ENSOANG00000002862) TENM1 (ENSOANG00000014549) #9 STAG2 (ENSOANG00000004050) #12 XIAP (ENSOANG00000004053) #13 THOC2 (ENSOANG00000004054) #14 GRIA3 (ENSOANG00000004058) #15 ENSOANG00000002575 #22 ENSOANG00000037418 #23 CUL4B (ENSOANG00000002578) #24 ATP1B4 (ENSOANG00000002581) #26 TMEM255A (ENSOANG00000002584) #27 ZBTB33 (ENSOANG00000044972) #28 ENSOANG00000002587 #31 ENSOANG00000029775 NDUFA1 (ENSOANG00000002591) #32 ENSOANG00000002592 #33 UPF3B (ENSOANG00000002594) #34 RPL39 (ENSOANG00000046605) #35 SEPTIN6 (ENSOANG00000002596) #37 NKRF (ENSOANG00000002598) ATP11C (ENSOANG00000002599) SLC25A43 (ENSOANG00000012900) Sauria ANCESTRAL SPECIES 21 ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 Archelosauria ANCESTRAL SPECIES 24 ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Archosauria ANCESTRAL SPECIES 15 ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Aves ANCESTRAL SPECIES 23 ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Neognathae ANCESTRAL SPECIES 22 ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Galloanserae ANCESTRAL SPECIES 21 ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Anatidae ANCESTRAL SPECIES 89 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 Pink-footed goose MODERN SPECIES 132 ENSABRG00000006765 GAB3 (ENSABRG00000006756) SMARCA1 (ENSABRG00000006727) TENM1 (ENSABRG00000006618) #9 SH2D1A (ENSABRG00000006591) #10 STAG2 (ENSABRG00000006557) #12 XIAP (ENSABRG00000006537) #13 THOC2 (ENSABRG00000006522) #14 GRIA3 (ENSABRG00000006490) #15 ENSABRG00000006467 #22 ENSABRG00000006464 #23 CUL4B (ENSABRG00000006451) #24 LAMP2 (ENSABRG00000006435) #25 ATP1B4 (ENSABRG00000006433) #26 TMEM255A (ENSABRG00000006430) #27 ZBTB33 (ENSABRG00000006429) #28 ENSABRG00000006426 Duck MODERN SPECIES 1 ENSAPLG00000014564 RAB39B (ENSAPLG00000014543) VBP1 (ENSAPLG00000014527) ENSAPLG00000014048 GAB3 (ENSAPLG00000013810) SMARCA1 (ENSAPLG00000013149) ENSAPLG00000020073 ENSAPLG00000028319 TENM1 (ENSAPLG00000012443) #9 SH2D1A (ENSAPLG00000012436) #10 STAG2 (ENSAPLG00000011118) #12 XIAP (ENSAPLG00000011039) #13 ENSAPLG00000025556 THOC2 (ENSAPLG00000010614) #14 GRIA3 (ENSAPLG00000009833) #15 ENSAPLG00000001693 #22 ENSAPLG00000009809 #23 CUL4B (ENSAPLG00000009282) #24 ATP1B4 (ENSAPLG00000009021) #26 LAMP2 (ENSAPLG00000009185) #25 ZBTB33 (ENSAPLG00000001681) #28 ENSAPLG00000025840 COL4A6 (ENSAPLG00000013356) ENSAPLG00000027232 ENSAPLG00000012868 IRS4 (ENSAPLG00000001321) NXT2 (ENSAPLG00000023390) KCNE5 (ENSAPLG00000012393) ACSL4 (ENSAPLG00000012394) TMEM164 (ENSAPLG00000012154) ENSAPLG00000027908 Phasianidae ANCESTRAL SPECIES 2 ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132.d ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b ENSGT00390000002197 Japanese quail MODERN SPECIES 22 ENSCJPG00005017229 RAB39B (ENSCJPG00005017230) VBP1 (ENSCJPG00005017231) ENSCJPG00005017232 GAB3 (ENSCJPG00005017234) SMARCA1 (ENSCJPG00005017238) ENSCJPG00005017371 TENM1 (ENSCJPG00005017430) #9 SH2D1A (ENSCJPG00005018778) #10 STAG2 (ENSCJPG00005018779) #12 XIAP (ENSCJPG00005018782) #13 THOC2 (ENSCJPG00005018783) #14 GRIA3 (ENSCJPG00005018784) #15 ENSCJPG00005018786 #36 ENSCJPG00005018787 ENSCJPG00005018790 #22 ENSCJPG00005018792 #23 CUL4B (ENSCJPG00005018794) #24 LAMP2 (ENSCJPG00005018796) #25 ATP1B4 (ENSCJPG00005018798) #26 TMEM255A (ENSCJPG00005018799) #27 ZBTB33 (ENSCJPG00005018805) #28 NKAP (ENSCJPG00005018808) #30 ENSCJPG00005018811 #31 NDUFA1 (ENSCJPG00005018813) #32 UPF3B (ENSCJPG00005018814) #34 RPL39 (ENSCJPG00005018815) #35 SEPTIN6 (ENSCJPG00005018817) #37 NKRF (ENSCJPG00005018818) UBE2A (ENSCJPG00005018819) STEEP1 (ENSCJPG00005018820) Phasianidae_b ANCESTRAL SPECIES 27 ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132.d ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT01030000236254 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b ENSGT00390000002197 Chicken MODERN SPECIES 33 PSMD10 (ENSGALG00010015795) VSIG1 (ENSGALG00010015815) ENSGALG00010015827 RAB39B (ENSGALG00010015832) ENSGALG00010015867 GAB3 (ENSGALG00010015881) SMARCA1 (ENSGALG00010015899) TENM1 (ENSGALG00010011658) #9 ENSGALG00010011666 SH2D1A (ENSGALG00010013213) #10 STAG2 (ENSGALG00010013273) #12 BIRC8 (ENSGALG00010013281) #13 THOC2 (ENSGALG00010013305) #14 GRIA3 (ENSGALG00010012207) #15 ENSGALG00010012231 #36 C1GALT1C1 (ENSGALG00010012234) #22 MCTS1 (ENSGALG00010012288) #23 CUL4B (ENSGALG00010012295) #24 LAMP2 (ENSGALG00010012431) #25 ATP1B4 (ENSGALG00010012759) #26 TMEM255A (ENSGALG00010016370) #27 ZBTB33 (ENSGALG00010012821) #28 NKAPL (ENSGALG00010012912) #30 AKAP14 (ENSGALG00010012929) #31 NDUFA1 (ENSGALG00010012934) #32 UPF3B (ENSGALG00010012938) #34 RPL39L (ENSGALG00010012955) #35 SEPTIN6 (ENSGALG00010016398) #37 NKRF (ENSGALG00010012977) UBE2A (ENSGALG00010012997) C4HXorf56 (ENSGALG00010013008) Turkey MODERN SPECIES 29 VSIG1 (ENSMGAG00000006860) ENSMGAG00000015819 ENSMGAG00000006902 ENSMGAG00000006921 ENSMGAG00000007000 SMARCA1 (ENSMGAG00000007042) TENM1 (ENSMGAG00000007089) #9 SH2D1A (ENSMGAG00000018308) #10 STAG2 (ENSMGAG00000007209) #12 ENSMGAG00000021906 XIAP (ENSMGAG00000007311) #13 THOC2 (ENSMGAG00000007345) #14 GRIA3 (ENSMGAG00000007420) #15 ENSMGAG00000022442 #36 ENSMGAG00000015394 ENSMGAG00000016867 #22 ENSMGAG00000007561 #23 CUL4B (ENSMGAG00000007563) #24 LAMP2 (ENSMGAG00000007621) #25 ATP1B4 (ENSMGAG00000007633) #26 TMEM255A (ENSMGAG00000007669) #27 ZBTB33 (ENSMGAG00000015397) #28 NKAP (ENSMGAG00000007693) #30 AKAP14 (ENSMGAG00000007709) #31 ENSMGAG00000007722 #32 UPF3B (ENSMGAG00000007728) #34 RPL39 (ENSMGAG00000007745) #35 NKRF (ENSMGAG00000007747) UBE2A (ENSMGAG00000017165) STEEP1 (ENSMGAG00000007793) SLC25A5 (ENSMGAG00000007809) Neognathae_b ANCESTRAL SPECIES ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Neognathae_c ANCESTRAL SPECIES 29 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b ENSGT00390000002197 Golden eagle MODERN SPECIES 13 ATG4A (ENSACCG00020010795) PSMD10 (ENSACCG00020010788) VSIG1 (ENSACCG00020010778) ENSACCG00020010756 RAB39B (ENSACCG00020010745) VBP1 (ENSACCG00020010736) ENSACCG00020010694 GAB3 (ENSACCG00020010652) SMARCA1 (ENSACCG00020010631) TENM1 (ENSACCG00020010596) #9 SH2D1A (ENSACCG00020010570) #10 STAG2 (ENSACCG00020010547) #12 XIAP (ENSACCG00020010528) #13 THOC2 (ENSACCG00020010466) #14 GRIA3 (ENSACCG00020010412) #15 ENSACCG00020010388 #22 ENSACCG00020010379 #23 CUL4B (ENSACCG00020010259) #24 LAMP2 (ENSACCG00020010106) #25 ATP1B4 (ENSACCG00020010091) #26 TMEM255A (ENSACCG00020010074) #27 ZBTB33 (ENSACCG00020010061) #28 NKAP (ENSACCG00020010054) #30 ENSACCG00020010043 #32 UPF3B (ENSACCG00020010029) #34 RPL39 (ENSACCG00020010012) #35 SOWAHD (ENSACCG00020010000) #36 SEPTIN6 (ENSACCG00020009968) #37 NKRF (ENSACCG00020009925) UBE2A (ENSACCG00020009907) STEEP1 (ENSACCG00020009892) Kakapo MODERN SPECIES 1 ATG4A (ENSSHBG00005020293) PSMD10 (ENSSHBG00005020289) VSIG1 (ENSSHBG00005020285) ENSSHBG00005020266 RAB39B (ENSSHBG00005020258) VBP1 (ENSSHBG00005020255) ENSSHBG00005020244 GAB3 (ENSSHBG00005020239) SMARCA1 (ENSSHBG00005020233) TENM1 (ENSSHBG00005018127) #9 SH2D1A (ENSSHBG00005017751) #10 STAG2 (ENSSHBG00005017175) #12 XIAP (ENSSHBG00005000840) #13 THOC2 (ENSSHBG00005000827) #14 GRIA3 (ENSSHBG00005015072) #15 ENSSHBG00005015058 #22 ENSSHBG00005015052 #23 CUL4B (ENSSHBG00005015038) #24 LAMP2 (ENSSHBG00005015025) #25 ATP1B4 (ENSSHBG00005015015) #26 TMEM255A (ENSSHBG00005015003) #27 ZBTB33 (ENSSHBG00005014992) #28 NKAP (ENSSHBG00005014986) #30 NDUFA1 (ENSSHBG00005014980) #32 UPF3B (ENSSHBG00005014977) #34 RPL39 (ENSSHBG00005014967) #35 SOWAHD (ENSSHBG00005014961) #36 SEPTIN6 (ENSSHBG00005014949) #37 NKRF (ENSSHBG00005014938) UBE2A (ENSSHBG00005014930) STEEP1 (ENSSHBG00005014925) Passeriformes ANCESTRAL SPECIES 33 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Great tit MODERN SPECIES 24 PSMD10 (ENSPMJG00000011409) VSIG1 (ENSPMJG00000011408) ENSPMJG00000011407 RAB39B (ENSPMJG00000011406) VBP1 (ENSPMJG00000011405) ENSPMJG00000011404 GAB3 (ENSPMJG00000011403) SMARCA1 (ENSPMJG00000011402) ENSPMJG00000011400 TENM1 (ENSPMJG00000011395) #9 SH2D1A (ENSPMJG00000011394) #10 STAG2 (ENSPMJG00000011393) #12 XIAP (ENSPMJG00000011392) #13 THOC2 (ENSPMJG00000011391) #14 GRIA3 (ENSPMJG00000011390) #15 ENSPMJG00000011386 #22 ENSPMJG00000011385 #23 CUL4B (ENSPMJG00000011384) #24 LAMP2 (ENSPMJG00000011383) #25 ATP1B4 (ENSPMJG00000011382) #26 TMEM255A (ENSPMJG00000011381) #27 ZBTB33 (ENSPMJG00000011380) #28 NKAP (ENSPMJG00000011379) #30 ENSPMJG00000011378 #31 ENSPMJG00000011377 #32 UPF3B (ENSPMJG00000011376) #34 RPL39 (ENSPMJG00000011374) #35 SOWAHD (ENSPMJG00000011373) #36 SEPTIN6 (ENSPMJG00000011372) #37 NKRF (ENSPMJG00000011371) UBE2A (ENSPMJG00000011370) Passeriformes_d ANCESTRAL SPECIES 34 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Passeriformes_g ANCESTRAL SPECIES 23 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Passeroidea ANCESTRAL SPECIES 25 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Zebra finch MODERN SPECIES 26 ATG4A (ENSTGUG00000004088) PSMD10 (ENSTGUG00000029282) VSIG1 (ENSTGUG00000004066) ENSTGUG00000022993 RAB39B (ENSTGUG00000019747) VBP1 (ENSTGUG00000004011) ENSTGUG00000003960 GAB3 (ENSTGUG00000003950) SMARCA1 (ENSTGUG00000003899) TENM1 (ENSTGUG00000003800) #9 SH2D1A (ENSTGUG00000003791) #10 STAG2 (ENSTGUG00000003722) #12 XIAP (ENSTGUG00000003713) #13 THOC2 (ENSTGUG00000003682) #14 GRIA3 (ENSTGUG00000003563) #15 ENSTGUG00000026851 #22 MCTS1 (ENSTGUG00000003338) #23 CUL4B (ENSTGUG00000003508) #24 LAMP2 (ENSTGUG00000003483) #25 ATP1B4 (ENSTGUG00000003461) #26 TMEM255A (ENSTGUG00000003447) #27 ZBTB33 (ENSTGUG00000018438) #28 NKAP (ENSTGUG00000012597) #30 ENSTGUG00000028222 NDUFA1 (ENSTGUG00000003432) #32 UPF3B (ENSTGUG00000003413) #34 RPL39 (ENSTGUG00000003411) #35 ENSTGUG00000023408 SEPTIN6 (ENSTGUG00000003361) #37 NKRF (ENSTGUG00000003356) STEEP1 (ENSTGUG00000003329) Common canary MODERN SPECIES 13 PSMD10 (ENSSCAG00000016730) VSIG1 (ENSSCAG00000016733) ENSSCAG00000016734 RAB39B (ENSSCAG00000016736) VBP1 (ENSSCAG00000016737) ENSSCAG00000016740 GAB3 (ENSSCAG00000016748) SMARCA1 (ENSSCAG00000016753) TENM1 (ENSSCAG00000016821) #9 SH2D1A (ENSSCAG00000016872) #10 STAG2 (ENSSCAG00000016873) #12 XIAP (ENSSCAG00000016875) #13 THOC2 (ENSSCAG00000016892) #14 GRIA3 (ENSSCAG00000016935) #15 ENSSCAG00000016937 ENSSCAG00000016938 #22 ENSSCAG00000016939 #23 CUL4B (ENSSCAG00000016942) #24 LAMP2 (ENSSCAG00000016945) #25 ATP1B4 (ENSSCAG00000016949) #26 TMEM255A (ENSSCAG00000016951) #27 ZBTB33 (ENSSCAG00000016955) #28 NKAP (ENSSCAG00000016957) #30 AKAP14 (ENSSCAG00000016958) #31 NDUFA1 (ENSSCAG00000016959) #32 UPF3B (ENSSCAG00000016960) #34 RPL39 (ENSSCAG00000016962) #35 SOWAHD (ENSSCAG00000016965) #36 SEPTIN6 (ENSSCAG00000016968) #37 NKRF (ENSSCAG00000016973) UBE2A (ENSSCAG00000016976) Medium ground finch MODERN SPECIES 17 ENSGFOG00000014499 VSIG1 (ENSGFOG00000014497) ENSGFOG00000014493 RAB39B (ENSGFOG00000014490) VBP1 (ENSGFOG00000014488) ENSGFOG00000014469 GAB3 (ENSGFOG00000014462) SMARCA1 (ENSGFOG00000014450) ENSGFOG00000014449 TENM1 (ENSGFOG00000014248) #9 SH2D1A (ENSGFOG00000014186) #10 STAG2 (ENSGFOG00000014170) #12 XIAP (ENSGFOG00000014166) #13 THOC2 (ENSGFOG00000014162) #14 GRIA3 (ENSGFOG00000014158) #15 ENSGFOG00000014157 #22 ENSGFOG00000014155 #23 CUL4B (ENSGFOG00000014151) #24 LAMP2 (ENSGFOG00000014149) #25 ATP1B4 (ENSGFOG00000014147) #26 TMEM255A (ENSGFOG00000014146) #27 ZBTB33 (ENSGFOG00000014143) #28 ENSGFOG00000014140 AKAP14 (ENSGFOG00000014139) #31 UPF3B (ENSGFOG00000014138) #34 ENSGFOG00000014137 SOWAHD (ENSGFOG00000014136) #36 SEPTIN6 (ENSGFOG00000014134) #37 NKRF (ENSGFOG00000014132) UBE2A (ENSGFOG00000014130) STEEP1 (ENSGFOG00000014128) Flycatcher MODERN SPECIES 23 VSIG1 (ENSFALG00000000195) ENSFALG00000000199 RAB39B (ENSFALG00000026366) ENSFALG00000000202 ENSFALG00000000204 ENSFALG00000000207 SMARCA1 (ENSFALG00000000209) TENM1 (ENSFALG00000001486) #9 SH2D1A (ENSFALG00000026386) #10 STAG2 (ENSFALG00000001510) #12 XIAP (ENSFALG00000001515) #13 ENSFALG00000024298 THOC2 (ENSFALG00000001519) #14 ENSFALG00000027751 GRIA3 (ENSFALG00000001524) #15 ENSFALG00000014562 #22 ENSFALG00000027960 #23 CUL4B (ENSFALG00000001535) #24 LAMP2 (ENSFALG00000001540) #25 ATP1B4 (ENSFALG00000001546) #26 TMEM255A (ENSFALG00000024832) #27 ZBTB33 (ENSFALG00000014581) #28 ENSFALG00000001554 AKAP14 (ENSFALG00000001561) #31 NDUFA1 (ENSFALG00000001564) #32 UPF3B (ENSFALG00000001569) #34 RPL39 (ENSFALG00000001576) #35 SOWAHD (ENSFALG00000024203) #36 SEPTIN6 (ENSFALG00000001580) #37 NKRF (ENSFALG00000001584) UBE2A (ENSFALG00000027947) African ostrich MODERN SPECIES 514 ENSSCUG00000006296 #22 ENSSCUG00000006299 #23 CUL4B (ENSSCUG00000006300) #24 LAMP2 (ENSSCUG00000006304) #25 ATP1B4 (ENSSCUG00000006308) #26 TMEM255A (ENSSCUG00000006310) #27 ZBTB33 (ENSSCUG00000006311) #28 NKAP (ENSSCUG00000006313) #30 AKAP14 (ENSSCUG00000006314) #31 UPF3B (ENSSCUG00000006315) #34 ENSSCUG00000006318 SEPTIN6 (ENSSCUG00000006322) #37 NKRF (ENSSCUG00000006324) UBE2A (ENSSCUG00000006326) STEEP1 (ENSSCUG00000006329) SLC25A5 (ENSSCUG00000006332) Australian saltwater crocodile MODERN SPECIES 43 TENM1 (ENSCPRG00005004084) #9 SH2D1A (ENSCPRG00005004157) #10 STAG2 (ENSCPRG00005004166) #12 XIAP (ENSCPRG00005004203) #13 THOC2 (ENSCPRG00005004266) #14 GRIA3 (ENSCPRG00005005037) #15 ENSCPRG00005005793 #22 ENSCPRG00005005801 #23 CUL4B (ENSCPRG00005005805) #24 LAMP2 (ENSCPRG00005005823) #25 ATP1B4 (ENSCPRG00005005840) #26 TMEM255A (ENSCPRG00005005852) #27 ZBTB33 (ENSCPRG00005005886) #28 NKAP (ENSCPRG00005005892) #30 ENSCPRG00005005899 UPF3B (ENSCPRG00005005908) #34 ENSCPRG00005005910 SOWAHD (ENSCPRG00005005919) #36 SEPTIN6 (ENSCPRG00005005923) #37 NKRF (ENSCPRG00005005929) UBE2A (ENSCPRG00005005934) STEEP1 (ENSCPRG00005005942) Cryptodira ANCESTRAL SPECIES 29 ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Testudinoidea ANCESTRAL SPECIES 24 ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b ENSGT00390000002197 Testudinidae ANCESTRAL SPECIES 21 ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00390000014814.a.b.a.a ##35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Goode s thornscrub tortoise MODERN SPECIES 23 PSMD10 (ENSGEVG00005015817) VSIG1 (ENSGEVG00005015832) ENSGEVG00005015892 RAB39B (ENSGEVG00005015914) VBP1 (ENSGEVG00005015946) ENSGEVG00005016033 GAB3 (ENSGEVG00005016216) SMARCA1 (ENSGEVG00005016269) TENM1 (ENSGEVG00005016383) #9 SH2D1A (ENSGEVG00005009304) #10 STAG2 (ENSGEVG00005009377) #12 XIAP (ENSGEVG00005009469) #13 THOC2 (ENSGEVG00005009559) #14 GRIA3 (ENSGEVG00005009698) #15 ENSGEVG00005009775 ENSGEVG00005009800 #22 ENSGEVG00005009831 #23 LAMP2 (ENSGEVG00005009966) #25 ATP1B4 (ENSGEVG00005010019) #26 TMEM255A (ENSGEVG00005010313) #27 ZBTB33 (ENSGEVG00005010528) #28 ENSGEVG00005010558 ENSGEVG00005010607 #32 UPF3B (ENSGEVG00005010657) #34 RPL39 (ENSGEVG00005010742) #35 SOWAHD (ENSGEVG00005010767) #36 SEPTIN6 (ENSGEVG00005010830) #37 NKRF (ENSGEVG00005010861) UBE2A (ENSGEVG00005010883) STEEP1 (ENSGEVG00005010908) SLC25A5 (ENSGEVG00005010937) Abingdon island giant tortoise MODERN SPECIES 2587 ENSCABG00000017524 #22 ENSCABG00000017521 #23 CUL4B (ENSCABG00000017514) #24 LAMP2 (ENSCABG00000017510) #25 ATP1B4 (ENSCABG00000017506) #26 TMEM255A (ENSCABG00000017494) #27 ZBTB33 (ENSCABG00000017492) #28 NKAP (ENSCABG00000017490) #30 NDUFA1 (ENSCABG00000017488) #32 UPF3B (ENSCABG00000017484) #34 RPL39 (ENSCABG00000017482) ##35 SOWAHD (ENSCABG00000017481) #36 SEPTIN6 (ENSCABG00000017402) #37 NKRF (ENSCABG00000017397) UBE2A (ENSCABG00000017395) STEEP1 (ENSCABG00000017393) Emydidae ANCESTRAL SPECIES 32 ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00960000187040 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b ENSGT00390000002197 Three-toed box turtle MODERN SPECIES 61 PSMD10 (ENSTMTG00000013208) VSIG1 (ENSTMTG00000013187) ENSTMTG00000013157 RAB39B (ENSTMTG00000013145) VBP1 (ENSTMTG00000013129) ENSTMTG00000013040 GAB3 (ENSTMTG00000012986) SMARCA1 (ENSTMTG00000012921) TENM1 (ENSTMTG00000012450) #9 SH2D1A (ENSTMTG00000012382) #10 STAG2 (ENSTMTG00000012299) #12 XIAP (ENSTMTG00000012282) #13 THOC2 (ENSTMTG00000009327) #14 GRIA3 (ENSTMTG00000009132) #15 ENSTMTG00000009119 ENSTMTG00000009111 #22 ENSTMTG00000009092 #23 CUL4B (ENSTMTG00000007138) #24 LAMP2 (ENSTMTG00000006999) #25 ATP1B4 (ENSTMTG00000006963) #26 TMEM255A (ENSTMTG00000006836) #27 ZBTB33 (ENSTMTG00000006813) #28 NKAP (ENSTMTG00000006767) #30 NDUFA1 (ENSTMTG00000006756) #32 UPF3B (ENSTMTG00000006720) #34 RPL39 (ENSTMTG00000006696) #35 SOWAHD (ENSTMTG00000006690) #36 SEPTIN6 (ENSTMTG00000006678) #37 NKRF (ENSTMTG00000006669) UBE2A (ENSTMTG00000006657) STEEP1 (ENSTMTG00000006636) painted turtle MODERN SPECIES 836 TENM1 (ENSCPBG00000015083) #9 SH2D1A (ENSCPBG00000015077) #10 ENSCPBG00000014354 #12 XIAP (ENSCPBG00000014275) #13 THOC2 (ENSCPBG00000012863) #14 GRIA3 (ENSCPBG00000012831) #15 ENSCPBG00000012829 ENSCPBG00000012827 #22 ENSCPBG00000012825 #23 CUL4B (ENSCPBG00000012824) #24 LAMP2 (ENSCPBG00000012822) #25 ATP1B4 (ENSCPBG00000012818) #26 Chinese turtle MODERN SPECIES 485 UBAC2 (ENSPSIG00000013069) GPR18 (ENSPSIG00000000722) GPR183 (ENSPSIG00000000746) ENSPSIG00000000752 TM9SF2 (ENSPSIG00000013207) SH2D1A (ENSPSIG00000014295) #10 STAG2 (ENSPSIG00000014503) #12 ENSPSIG00000000766 ENSPSIG00000014708 XIAP (ENSPSIG00000014717) #13 THOC2 (ENSPSIG00000015352) #14 GRIA3 (ENSPSIG00000015805) #15 ENSPSIG00000016705 ENSPSIG00000000783 #22 ENSPSIG00000016796 #23 CUL4B (ENSPSIG00000016808) #24 LAMP2 (ENSPSIG00000017370) #25 ATP1B4 (ENSPSIG00000017687) #26 TMEM255A (ENSPSIG00000017928) #27 ZBTB33 (ENSPSIG00000017935) #28 NKAP (ENSPSIG00000017972) #30 AKAP14 (ENSPSIG00000005797) #31 UPF3B (ENSPSIG00000005833) #34 RPL39 (ENSPSIG00000005905) #35 SOWAHD (ENSPSIG00000000809) #36 SEPTIN6 (ENSPSIG00000005925) #37 NKRF (ENSPSIG00000006177) UBE2A (ENSPSIG00000006695) STEEP1 (ENSPSIG00000006698) Lepidosauria ANCESTRAL SPECIES 30 ENSGT00530000063000.a.b.a ENSGT00940000153404.a ENSGT00940000160507 ENSGT00940000165718 ENSGT00940000158132 ENSGT00390000018904 ENSGT00950000183068.a.a ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Episquamata ANCESTRAL SPECIES 14 ENSGT00940000158987 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Laterata ANCESTRAL SPECIES 32 ENSGT00940000158987 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000003444 #31 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Common wall lizard MODERN SPECIES 419 ENSPMRG00000019251 DIAPH2 (ENSPMRG00000019275) ENSPMRG00000019335 ENSPMRG00000019341 ENSPMRG00000019352 ENSPMRG00000019359 KLHL4 (ENSPMRG00000019362) STAG2 (ENSPMRG00000019375) #12 XIAP (ENSPMRG00000019403) #13 ENSPMRG00000019431 #14 ENSPMRG00000019473 GRIA3 (ENSPMRG00000019489) #15 ENSPMRG00000019531 ENSPMRG00000019537 ENSPMRG00000019540 ENSPMRG00000019543 #22 ENSPMRG00000019550 #23 CUL4B (ENSPMRG00000019560) #24 LAMP2 (ENSPMRG00000019585) #25 ENSPMRG00000019602 ATP1B4 (ENSPMRG00000019610) #26 ENSPMRG00000019622 #27 ZBTB33 (ENSPMRG00000019633) #28 ENSPMRG00000019638 AKAP14 (ENSPMRG00000019648) #31 ENSPMRG00000019655 #32 UPF3B (ENSPMRG00000019662) #34 ENSPMRG00000019674 #35 SOWAHD (ENSPMRG00000019685) #36 SEPTIN6 (ENSPMRG00000019695) #37 NKRF (ENSPMRG00000019709) Argentine black and white tegu MODERN SPECIES 61 SYTL4 (ENSSMRG00000013251) SRPX2 (ENSSMRG00000013252) TSPAN6 (ENSSMRG00000013253) TNMD (ENSSMRG00000013254) ENSSMRG00000013255 PCDH19 (ENSSMRG00000013256) DIAPH2 (ENSSMRG00000013259) ENSSMRG00000013263 ENSSMRG00000013265 ENSSMRG00000013267 KLHL4 (ENSSMRG00000013271) STAG2 (ENSSMRG00000013274) #12 XIAP (ENSSMRG00000013278) #13 THOC2 (ENSSMRG00000013291) #14 GRIA3 (ENSSMRG00000015715) #15 ENSSMRG00000017737 #22 ENSSMRG00000017740 #23 CUL4B (ENSSMRG00000017744) #24 ENSSMRG00000017751 #25 ATP1B4 (ENSSMRG00000017757) #26 TMEM255A (ENSSMRG00000017761) #27 ZBTB33 (ENSSMRG00000017765) #28 ENSSMRG00000017767 AKAP14 (ENSSMRG00000017771) #31 NDUFA1 (ENSSMRG00000017772) #32 UPF3B (ENSSMRG00000017773) #34 ENSSMRG00000017774 #35 SOWAHD (ENSSMRG00000017777) #36 SEPTIN6 (ENSSMRG00000017782) #37 ENSSMRG00000017784 NKRF (ENSSMRG00000017785) Toxicofera ANCESTRAL SPECIES 17 ENSGT00940000158987 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000159818 ENSGT00950000182972.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Elapidae ANCESTRAL SPECIES 14 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00390000007683.m.b ENSGT00940000159818.a ENSGT00950000182972.a.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00960000190822 ENSGT00390000017146.a #34 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Indian cobra MODERN SPECIES 13 SRPX2 (ENSNNAG00000014536) TSPAN6 (ENSNNAG00000014915) TNMD (ENSNNAG00000014929) PCDH19 (ENSNNAG00000014951) DIAPH2 (ENSNNAG00000015048) ENSNNAG00000015920 ENSNNAG00000015936 ENSNNAG00000015951 ENSNNAG00000016004 KLHL4 (ENSNNAG00000016014) ENSNNAG00000016046 #12 XIAP (ENSNNAG00000016126) #13 THOC2 (ENSNNAG00000016161) #14 GRIA3 (ENSNNAG00000016217) #15 ENSNNAG00000016230 #15 ENSNNAG00000016243 #22 ENSNNAG00000016250 #23 CUL4B (ENSNNAG00000016309) #24 LAMP2 (ENSNNAG00000016785) #25 ATP1B4 (ENSNNAG00000016805) #26 ENSNNAG00000016813 ZBTB33 (ENSNNAG00000016825) #28 ENSNNAG00000010161 #30 ENSNNAG00000010172 ENSNNAG00000010175 #34 ENSNNAG00000010182 RPL39 (ENSNNAG00000010193) #35 SOWAHD (ENSNNAG00000010215) #36 SEPTIN6 (ENSNNAG00000010254) #37 NKRF (ENSNNAG00000010548) UBE2A (ENSNNAG00000010562) Elapidae_a ANCESTRAL SPECIES 30 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00390000007683.m.b ENSGT00940000159818.a ENSGT00950000182972.a.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000003444 #31 ENSGT00960000190822 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Acanthophiinae ANCESTRAL SPECIES 20 ENSGT00940000153304.A ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000175287 ENSGT00940000158335 ENSGT00390000007683.m.b ENSGT00940000159818.a ENSGT00950000182972.a.a.a.a.a.a #12 ENSGT00940000158743 #13 ENSGT00710000106792 #14 ENSGT00940000156123.b #15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00940000165599.C ENSGT00960000190822 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 554 ENSPTXG00000015411 #22 Eastern brown snake MODERN SPECIES 555 ENSPTXG00000015412 #22 Mainland tiger snake MODERN SPECIES 65 SYTL4 (ENSNSUG00000003001) SRPX2 (ENSNSUG00000003002) TSPAN6 (ENSNSUG00000003005) TNMD (ENSNSUG00000003007) PCDH19 (ENSNSUG00000003009) DIAPH2 (ENSNSUG00000003012) ENSNSUG00000003069 ENSNSUG00000003070 ENSNSUG00000003077 KLHL4 (ENSNSUG00000003082) STAG2 (ENSNSUG00000003118) #12 XIAP (ENSNSUG00000009062) #13 THOC2 (ENSNSUG00000009069) #14 GRIA3 (ENSNSUG00000009990) #15 ENSNSUG00000009991 #15 ENSNSUG00000009992 #22 ENSNSUG00000009993 #23 CUL4B (ENSNSUG00000009994) #24 LAMP2 (ENSNSUG00000009995) #25 ATP1B4 (ENSNSUG00000009996) #26 TMEM255A (ENSNSUG00000009997) #27 ZBTB33 (ENSNSUG00000009998) #28 ENSNSUG00000009999 ENSNSUG00000010000 UPF3B (ENSNSUG00000010001) #34 RPL39 (ENSNSUG00000010002) #35 SOWAHD (ENSNSUG00000010004) #36 SEPTIN6 (ENSNSUG00000010005) #37 IL1RAPL2 (ENSNSUG00000010063) ENSNSUG00000010069 ENSNSUG00000010072 Blue-lipped sea krait MODERN SPECIES 7598 ENSLLTG00000003600 #22 ENSLLTG00000003613 #23 CUL4B (ENSLLTG00000003639) #24 Lizard MODERN SPECIES 1435 ENSACAG00000010827 #22 mcts1 (ENSACAG00000034893) #23 CUL4B (ENSACAG00000010679) #24 tuatara MODERN SPECIES 1491 ENSSPUG00000012764 TENM1 (ENSSPUG00000012790) #9 SH2D1A (ENSSPUG00000012815) #10 STAG2 (ENSSPUG00000012827) #12 XIAP (ENSSPUG00000012874) #13 THOC2 (ENSSPUG00000012889) #14 GRIA3 (ENSSPUG00000012917) #15 ENSSPUG00000012936 #22 ENSSPUG00000012942 #23 ENSSPUG00000012946 CUL4B (ENSSPUG00000012949) #24 LAMP2 (ENSSPUG00000012963) #25 ATP1B4 (ENSSPUG00000012974) #26 TMEM255A (ENSSPUG00000012995) #27 ZBTB33 (ENSSPUG00000013040) #28 ENSSPUG00000013046 ENSSPUG00000013061 NDUFA1 (ENSSPUG00000013071) #32 UPF3B (ENSSPUG00000013082) #34 ENSSPUG00000013103 SEPTIN6 (ENSSPUG00000013155) #37 NKRF (ENSSPUG00000013178) UBE2A (ENSSPUG00000013189) Anura ANCESTRAL SPECIES 106 ENSGT00940000153284.a ENSGT00940000164592 ENSGT00940000164372 ENSGT00390000003601.a ENSGT00940000165070.q ENSGT00940000164144 ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000153902.b.i ENSGT00940000153902.b.j ENSGT00940000162717 ENSGT00940000166620 ENSGT00390000018389 ENSGT00940000159316 ENSGT00390000014785 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 Frog MODERN SPECIES 8 chic1 (ENSXETG00000035569) cdx4 (ENSXETG00000004589) kdrl (ENSXETG00000037279) arhgef9 (ENSXETG00000034320) amer1 (ENSXETG00000040917) asb12 (ENSXETG00000041637) asb12.2 (ENSXETG00000047059) mtmr8 (ENSXETG00000025610) ENSXETG00000046111 ENSXETG00000040922 c8orf48 (ENSXETG00000037238) ENSXETG00000043534 zc4h2 (ENSXETG00000017793) zc3h12b (ENSXETG00000035396) las1l (ENSXETG00000030019) c1galt1c1 (ENSXETG00000036572) #22 mcts1 (ENSXETG00000004472) #23 cul4b (ENSXETG00000004474) #24 atp1b4 (ENSXETG00000004477) #26 tmem255a (ENSXETG00000004476) #27 zbtb33 (ENSXETG00000049420) #28 ENSXETG00000031140 acod1la (ENSXETG00000034631) ENSXETG00000043989 satpa (ENSXETG00000004489) phyhdla.1 (ENSXETG00000036485) phyhdlb (ENSXETG00000038979) ENSXETG00000004487 acod1lb (ENSXETG00000034762) ENSXETG00000048208 atp7a (ENSXETG00000033355) Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000013955 ENSLLEG00000014006 ENSLLEG00000014247 ENSLLEG00000014760 ARHGEF9 (ENSLLEG00000014842) AMER1 (ENSLLEG00000015823) ENSLLEG00000015859 MTMR8 (ENSLLEG00000015887) ENSLLEG00000016128 ENSLLEG00000016148 ENSLLEG00000016202 ZC4H2 (ENSLLEG00000016245) ENSLLEG00000016530 ENSLLEG00000016609 ENSLLEG00000016685 ENSLLEG00000016703 #22 ENSLLEG00000016734 #23 CUL4B (ENSLLEG00000017007) #24 LAMP2 (ENSLLEG00000018114) #25 ATP1B4 (ENSLLEG00000018305) #26 ENSLLEG00000018445 TMEM255A (ENSLLEG00000018878) #27 ZBTB33 (ENSLLEG00000019244) #28 ENSLLEG00000019275 ENSLLEG00000019290 GRIA3 (ENSLLEG00000019429) #15 ENSLLEG00000021162 THOC2 (ENSLLEG00000021193) #14 XIAP (ENSLLEG00000021553) #13 ENSLLEG00000021703 STAG2 (ENSLLEG00000021746) #12 Coelacanth MODERN SPECIES 1188 c1galt1c1 (ENSLACG00000004236) #22 CUL4B (ENSLACG00000004718) #24 LAMP2 (ENSLACG00000005616) #25 ATP1B4 (ENSLACG00000006694) #26 TMEM255A (ENSLACG00000007203) #27 ZBTB33 (ENSLACG00000008064) #28 NKAPL (ENSLACG00000008279) NDUFA1 (ENSLACG00000008637) #32 UPF3B (ENSLACG00000008691) #34 RPL39 (ENSLACG00000008876) ##35 SOWAHD (ENSLACG00000008998) #36 SEPTIN6 (ENSLACG00000009093) #37 NKRF (ENSLACG00000009612) UBE2A (ENSLACG00000009955) ENSLACG00000010651 SLC25A43 (ENSLACG00000010810) Actinopterygii ANCESTRAL SPECIES 37 ENSGT00940000158987 ENSGT00390000008142 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000165512 ENSGT00940000163102 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 Reedfish MODERN SPECIES 3 cstf2 (ENSECRG00000012700) si:dkey-251i10.3 (ENSECRG00000012671) ENSECRG00000012653 mid1ip1l (ENSECRG00000012641) tspan7 (ENSECRG00000012624) SRPX2 (ENSECRG00000012593) sytl4 (ENSECRG00000012542) trmt12 (ENSECRG00000012521) zdhhc9 (ENSECRG00000012502) SASH3 (ENSECRG00000012484) xpnpep2 (ENSECRG00000012455) ENSECRG00000012441 ocrl (ENSECRG00000012367) ENSECRG00000012300 clic2 (ENSECRG00000012281) c1galt1c1 (ENSECRG00000012265) #22 mcts1 (ENSECRG00000012244) #23 cul4b (ENSECRG00000012168) #24 lamp2 (ENSECRG00000012097) #25 ATP1B4 (ENSECRG00000012065) #26 TMEM255A (ENSECRG00000012039) #27 zbtb33 (ENSECRG00000012018) #28 nkap (ENSECRG00000012002) AKAP14 (ENSECRG00000011988) #31 ENSECRG00000011973 #31 ENSECRG00000011965 AKAP14 (ENSECRG00000011943) #31 ENSECRG00000014594 ndufa1 (ENSECRG00000014554) #32 upf3b (ENSECRG00000014515) #34 RPL39 (ENSECRG00000014475) #35 Neopterygii ANCESTRAL SPECIES 12 ENSGT00390000008142 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 Spotted gar MODERN SPECIES 673 si:dkey-251i10.3 (ENSLOCG00000015298) ENSLOCG00000015296 mid1ip1l (ENSLOCG00000017497) tspan7 (ENSLOCG00000015294) SRPX2 (ENSLOCG00000015293) sytl4 (ENSLOCG00000015291) trmt12 (ENSLOCG00000015290) zdhhc9 (ENSLOCG00000015287) SASH3 (ENSLOCG00000015281) xpnpep2 (ENSLOCG00000015278) apln (ENSLOCG00000015277) ocrl (ENSLOCG00000015266) ENSLOCG00000015263 clic2 (ENSLOCG00000015260) urp1 (ENSLOCG00000015259) c1galt1c1 (ENSLOCG00000017496) #22 mcts1 (ENSLOCG00000015255) #23 cul4b (ENSLOCG00000015253) #24 lamp2 (ENSLOCG00000015251) #25 ATP1B4 (ENSLOCG00000015247) #26 TMEM255A (ENSLOCG00000015244) #27 zbtb33 (ENSLOCG00000015243) #28 AKAP14 (ENSLOCG00000015242) #31 nkap (ENSLOCG00000015241) ndufa1 (ENSLOCG00000015240) #32 si:dkey-251i10.2 (ENSLOCG00000015239) upf3b (ENSLOCG00000015238) #34 rpl39 (ENSLOCG00000015236) #35 SOWAHD (ENSLOCG00000017495) #36 septin6 (ENSLOCG00000015233) #37 nkrf (ENSLOCG00000015232) Osteoglossocephalai ANCESTRAL SPECIES 19 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000157256 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 140 ENSGT00940000165729.f ENSGT00940000158987 ENSGT00940000153737.a.`b.a ENSGT00940000159092 ENSGT00940000159149.i ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999.a ENSGT00940000160111 ENSGT00940000157196 ENSGT00950000184267.a ENSGT00940000157996.j ENSGT00940000163305.a.b ENSGT00940000161397.f ENSGT00670000099471 ENSGT00940000155145.`c #22 ENSGT00550000074964 #23 ENSGT00940000155339.nb #24 ENSGT00950000182899.B.b.f #25 ENSGT00940000160471.e #27 ENSGT00940000157481.i #28 ENSGT00940000163102 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026.b #37 ENSGT00940000157256.m ENSGT00940000155075.a.b.b ENSGT00940000154622.a.b Asian bonytongue MODERN SPECIES 4 cstf2 (ENSSFOG00015006348) ENSSFOG00015006313 ENSSFOG00015026783 tspan7 (ENSSFOG00015027728) SRPX2 (ENSSFOG00015006143) sytl4 (ENSSFOG00015006110) trmt12 (ENSSFOG00015006090) zdhhc9 (ENSSFOG00015027828) SASH3 (ENSSFOG00015006052) xpnpep2 (ENSSFOG00015006015) ENSSFOG00015005999 ocrl (ENSSFOG00015005935) ENSSFOG00015005852 ENSSFOG00015032114 urp1 (ENSSFOG00015005786) c1galt1c1 (ENSSFOG00015005772) #22 mcts1 (ENSSFOG00015005757) #23 cul4b (ENSSFOG00015005718) #24 LAMP2 (ENSSFOG00015005702) #25 TMEM255A (ENSSFOG00015005670) #27 zbtb33 (ENSSFOG00015005666) #28 nkap (ENSSFOG00015005648) ndufa1 (ENSSFOG00015005633) #32 upf3b (ENSSFOG00015005614) #34 SOWAHD (ENSSFOG00015027122) #36 septin6 (ENSSFOG00015005477) #37 nkrf (ENSSFOG00015005460) ube2a (ENSSFOG00015005444) ENSSFOG00015020766 slc25a43 (ENSSFOG00015005421) ENSSFOG00015005388 P. kingsleyae MODERN SPECIES 294 xpnpep2 (ENSPKIG00000021789) ENSPKIG00000021764 ENSPKIG00000021749 ocrl (ENSPKIG00000021691) ENSPKIG00000021593 CLIC2 (ENSPKIG00000021553) urp1 (ENSPKIG00000021537) c1galt1c1 (ENSPKIG00000021525) #22 mcts1 (ENSPKIG00000021497) #23 rgs14a (ENSPKIG00000021463) ENSPKIG00000021451 SLC34A1 (ENSPKIG00000021439) adra2da (ENSPKIG00000021417) ENSPKIG00000021396 cnot6b (ENSPKIG00000021368) ADAMTS2 (ENSPKIG00000021249) ENSPKIG00000021201 ENSPKIG00000021188 ENSPKIG00000021167 gfpt2 (ENSPKIG00000021062) MAPK9 (ENSPKIG00000020990) ENSPKIG00000020968 RASGEF1C (ENSPKIG00000020926) Osteoglossiformes ANCESTRAL SPECIES 341 ENSGT00950000184267.b ENSGT00940000164536.b ENSGT00940000157996.i ENSGT00940000161397.e ENSGT00940000155145.ac #22 ENSGT00940000155339.ob #24 ENSGT00950000182899.B.b.e #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471.f #27 ENSGT00940000157481.j #28 ENSGT00390000003444 #31 ENSGT00940000165599.C ENSGT00940000158026.a #37 ENSGT00940000157256.n ENSGT00940000155075.a.b.a Asian bonytongue MODERN SPECIES 5 timm8a (ENSSFOG00015028804) zgc:101583 (ENSSFOG00015009814) DRP2 (ENSSFOG00015009851) TMEM35A (ENSSFOG00015026572) arl13a (ENSSFOG00015010065) ENSSFOG00015010125 nox1 (ENSSFOG00015010204) si:dkey-251i10.3 (ENSSFOG00015010260) ENSSFOG00015031316 mid1ip1l (ENSSFOG00015031175) SRPX2 (ENSSFOG00015010347) zdhhc9 (ENSSFOG00015010405) ENSSFOG00015010447 ocrl (ENSSFOG00015010512) clic2 (ENSSFOG00015010636) c1galt1c1 (ENSSFOG00015010656) #22 CUL4B (ENSSFOG00015010668) #24 LAMP2 (ENSSFOG00015010718) #25 ATP1B4 (ENSSFOG00015026216) #26 ENSSFOG00015027976 TMEM255A (ENSSFOG00015010769) #27 zbtb33 (ENSSFOG00015010783) #28 AKAP14 (ENSSFOG00015010796) #31 si:dkey-251i10.2 (ENSSFOG00015010802) septin6 (ENSSFOG00015010832) #37 NKRF (ENSSFOG00015010898) ube2a (ENSSFOG00015010996) slc25a5 (ENSSFOG00015011507) lnx2b (ENSSFOG00015010918) ENSSFOG00015010948 CHIC1 (ENSSFOG00015028087) P. kingsleyae MODERN SPECIES 63 ENSPKIG00000013182 smpd1 (ENSPKIG00000013212) ilk (ENSPKIG00000013250) timm10b (ENSPKIG00000013319) ENSPKIG00000013340 ENSPKIG00000013364 ENSPKIG00000013383 ENSPKIG00000013400 ENSPKIG00000013417 ENSPKIG00000013443 ENSPKIG00000013464 ocrl (ENSPKIG00000013523) clic2 (ENSPKIG00000013641) c1galt1c1 (ENSPKIG00000013664) #22 cul4b (ENSPKIG00000013700) #24 ATP1B4 (ENSPKIG00000013785) #26 TMEM255A (ENSPKIG00000013817) #27 ENSPKIG00000013858 #31 ENSPKIG00000013888 septin6 (ENSPKIG00000013948) #37 NKRF (ENSPKIG00000013989) ube2a (ENSPKIG00000014011) ENSPKIG00000014043 lnx2b (ENSPKIG00000014088) ENSPKIG00000014162 chic1 (ENSPKIG00000014193) ENSPKIG00000014211 kdrl (ENSPKIG00000014282) DLG3 (ENSPKIG00000014439) Clupeocephala ANCESTRAL SPECIES 35 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 Otomorpha ANCESTRAL SPECIES 15 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000163684 ENSGT00940000165821 Otophysi ANCESTRAL SPECIES 22 ENSGT00940000154444.B ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00940000155999.f ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b ENSGT00670000099471 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000157996 ENSGT00940000164536.b ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000163684 ENSGT00940000165821 Characiphysae ANCESTRAL SPECIES 7 ENSGT00940000165241 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00940000155999.f ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b.m ENSGT00670000099471 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000157996 ENSGT00940000164536.b ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000165821 ENSGT00940000153222.a.b.b.b.b ENSGT00940000177072 Characiphysae_b ANCESTRAL SPECIES 7 ENSGT00940000165241 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00940000155999.f ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b.m ENSGT00670000099471 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000157996 ENSGT00940000164536.b ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000165821 ENSGT00940000153222.a.b.b.b.b ENSGT00940000177072 Characoidei ANCESTRAL SPECIES 2 ENSGT00940000165241 ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00940000155999.f ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b.m ENSGT00670000099471 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000157996 ENSGT00940000164536.b ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000165821 ENSGT00940000153222.a.b.b.b.b ENSGT00940000177072 Mexicana tetra MODERN SPECIES 16 ENSAMXG00000041698 itk (ENSAMXG00000034758) cyfip2 (ENSAMXG00000000247) foxa (ENSAMXG00000037215) zdhhc24 (ENSAMXG00000036082) ENSAMXG00000041182 urp1 (ENSAMXG00000000242) clic2 (ENSAMXG00000038409) ENSAMXG00000041415 ocrl (ENSAMXG00000000239) ENSAMXG00000036378 ENSAMXG00000030054 xpnpep2 (ENSAMXG00000000237) SASH3 (ENSAMXG00000034496) zdhhc9 (ENSAMXG00000000230) c1galt1c1 (ENSAMXG00000025372) #22 mcts1 (ENSAMXG00000034833) #23 cul4b (ENSAMXG00000000215) #24 lamp2 (ENSAMXG00000033903) #25 ATP1B4 (ENSAMXG00000041241) #26 TMEM255A (ENSAMXG00000000204) #27 zbtb33 (ENSAMXG00000025371) #28 NKAP (ENSAMXG00000000202) #30 ndufa1 (ENSAMXG00000033571) #32 upf3b (ENSAMXG00000000199) #34 rpl39 (ENSAMXG00000000196) #35 ENSAMXG00000025370 #36 septin6 (ENSAMXG00000033660) #37 rab41 (ENSAMXG00000033216) stard14 (ENSAMXG00000000192) pdzd11 (ENSAMXG00000000191) Red-bellied piranha MODERN SPECIES 56 ENSPNAG00000020292 itk (ENSPNAG00000020462) cyfip2 (ENSPNAG00000020606) foxa (ENSPNAG00000020633) zdhhc24 (ENSPNAG00000006687) ENSPNAG00000020718 urp1 (ENSPNAG00000020742) clic2 (ENSPNAG00000020772) ENSPNAG00000020804 ocrl (ENSPNAG00000020943) ENSPNAG00000021011 apln (ENSPNAG00000021023) xpnpep2 (ENSPNAG00000021036) SASH3 (ENSPNAG00000021052) zdhhc9 (ENSPNAG00000021101) c1galt1c1 (ENSPNAG00000006688) #22 mcts1 (ENSPNAG00000003671) #23 cul4b (ENSPNAG00000021228) #24 lamp2 (ENSPNAG00000021295) #25 ATP1B4 (ENSPNAG00000021345) #26 ENSPNAG00000021351 TMEM255A (ENSPNAG00000021424) #27 zbtb33 (ENSPNAG00000021440) #28 nkap (ENSPNAG00000021449) ndufa1 (ENSPNAG00000021478) #32 upf3b (ENSPNAG00000021528) #34 rpl39 (ENSPNAG00000021555) #35 ENSPNAG00000021564 #36 septin6 (ENSPNAG00000021638) #37 rab41 (ENSPNAG00000021737) stard14 (ENSPNAG00000021805) Electric eel MODERN SPECIES 310 apln (ENSEEEG00000014632) xpnpep2 (ENSEEEG00000014614) SASH3 (ENSEEEG00000014612) zdhhc9 (ENSEEEG00000014610) c1galt1c1 (ENSEEEG00000014607) #22 mcts1 (ENSEEEG00000014603) #23 cul4b (ENSEEEG00000014514) #24 lamp2 (ENSEEEG00000014499) #25 ENSEEEG00000014498 ATP1B4 (ENSEEEG00000014496) #26 TMEM255A (ENSEEEG00000014493) #27 zbtb33 (ENSEEEG00000014492) #28 NKAP (ENSEEEG00000014490) #30 ndufa1 (ENSEEEG00000014488) #32 upf3b (ENSEEEG00000014486) #34 rpl39 (ENSEEEG00000014481) #35 ENSEEEG00000014477 #36 septin6 (ENSEEEG00000014450) #37 rab41 (ENSEEEG00000014398) stard14 (ENSEEEG00000014394) Channel catfish MODERN SPECIES 27 itk (ENSIPUG00000018605) CYFIP2 (ENSIPUG00000018665) foxa2-a (ENSIPUG00000018793) zdhhc24 (ENSIPUG00000018806) ENSIPUG00000018816 urp1 (ENSIPUG00000018836) clic2 (ENSIPUG00000018849) ENSIPUG00000018859 ocrl (ENSIPUG00000018882) ENSIPUG00000018912 apln (ENSIPUG00000018932) bcl2l10 (ENSIPUG00000018935) xpnpep2 (ENSIPUG00000018941) sash3 (ENSIPUG00000018971) zdhhc9 (ENSIPUG00000018997) C1GALT1C1 (ENSIPUG00000019048) #22 mcts1 (ENSIPUG00000019053) #23 CUL4B (ENSIPUG00000019091) #24 lamp2 (ENSIPUG00000019154) #25 atp1b4 (ENSIPUG00000019160) #26 tmem255a (ENSIPUG00000019186) #27 zbtb33 (ENSIPUG00000019203) #28 nkap (ENSIPUG00000019211) Ndufa1 (ENSIPUG00000019235) #32 upf3b (ENSIPUG00000019249) #34 rpl39 (ENSIPUG00000019288) #35 sowahd (ENSIPUG00000019307) #36 septin6 (ENSIPUG00000019317) #37 rab41 (ENSIPUG00000019382) Stard10 (ENSIPUG00000019435) pdzd11 (ENSIPUG00000019450) Cyprinoidei ANCESTRAL SPECIES 9 ENSGT00940000154444.B ENSGT00940000158850 ENSGT00500000044831.a.a.b ENSGT00940000155999.f ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b ENSGT00670000099471 ENSGT00940000161397 ENSGT00940000163305.a.b ENSGT00940000157996 ENSGT00940000164536.b ENSGT00390000014020 ENSGT00940000157196 ENSGT00940000160111 ENSGT00940000159999 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00940000158026 #37 ENSGT00940000163684 ENSGT00940000165821 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 43 ENSGT00550000074964.b #23 ENSGT00940000155339.ib #24 ENSGT00950000182899.B.b.a #25 ENSGT01030000234579.B.a.b #26 ENSGT00940000160471.c #27 ENSGT00940000157481.k #28 ENSGT00940000163102 ENSGT00390000007560.i #32 ENSGT00390000017146.a.u #34 ENSGT00390000014814.b.d.a #35 ENSGT00940000157996.l ENSGT00390000014020.f ENSGT00940000157196.e ENSGT00940000160111.d ENSGT00940000159999.c ENSGT00940000155145.bc #22 ENSGT00550000074964.a #23 ENSGT00940000155339.hb #24 ENSGT00950000182899.B.b.b #25 ENSGT01030000234579.B.a.a #26 ENSGT00940000160471.d #27 ENSGT00940000157481.l #28 ENSGT00940000160787 #30 ENSGT00390000007560.j #32 ENSGT00390000017146.a.v #34 ENSGT00390000014814.b.d.b #35 ENSGT00950000183003.a.a.a.b.d #36 ENSGT00940000158026.e #37 ENSGT00940000163684 ENSGT00940000165821.c ENSGT00940000153222.a.b.b.b.b.w.b.a Goldfish MODERN SPECIES 5 gria1a (ENSCARG00000058821) ENSCARG00000058908 ENSCARG00000058924 itk (ENSCARG00000058951) cyfip2 (ENSCARG00000059433) foxa (ENSCARG00000059870) zdhhc24 (ENSCARG00000059889) ENSCARG00000059924 urp1 (ENSCARG00000059960) clic2 (ENSCARG00000060004) ocrl (ENSCARG00000060336) apln (ENSCARG00000065303) xpnpep2 (ENSCARG00000065347) SASH3 (ENSCARG00000066309) zdhhc9 (ENSCARG00000066318) c1galt1c1 (ENSCARG00000066328) #22 mcts1 (ENSCARG00000066336) #23 cul4b (ENSCARG00000066410) #24 ENSCARG00000067357 lamp2 (ENSCARG00000067370) #25 ATP1B4 (ENSCARG00000067384) #26 TMEM255A (ENSCARG00000067428) #27 zbtb33 (ENSCARG00000067462) #28 ENSCARG00000067466 ndufa1 (ENSCARG00000067482) #32 upf3b (ENSCARG00000067495) #34 rpl39 (ENSCARG00000067557) #35 ENSCARG00000067574 #36 septin6 (ENSCARG00000067650) #37 RAB41 (ENSCARG00000068586) stard14 (ENSCARG00000068595) Cyprininae_a ANCESTRAL SPECIES 97 ENSGT00940000157342.c.a.a ENSGT00440000033329.a.a.a.e ENSGT00940000154444.B ENSGT00940000158850.n ENSGT00500000044831.a.a.b.f.b ENSGT00940000155999.f.b ENSGT00940000164006.n.a ENSGT01030000234532.A.a.a.a.a.b.l ENSGT00670000099471.a ENSGT00940000161397.c ENSGT00940000157996.l ENSGT00390000014020.f ENSGT00940000157196.e ENSGT00940000160111.d ENSGT00940000159999.c ENSGT00940000155145.bc #22 ENSGT00550000074964.a #23 ENSGT00940000155339.hb #24 ENSGT00950000182899.B.b.a #25 ENSGT01030000234579.B.a.a #26 ENSGT00940000160471.d #27 ENSGT00940000157481.l #28 ENSGT00940000160787 #30 ENSGT00940000165950 ENSGT00390000007560.i #32 ENSGT00390000017146.a.v #34 ENSGT00390000014814.b.d.b #35 ENSGT00950000183003.a.a.a.b.d #36 ENSGT00940000158026.e #37 ENSGT00940000163684 ENSGT00940000165821.c Common carp reference MODERN SPECIES 35 ENSCCRG00000008606 med7 (ENSCCRG00000078971) itk (ENSCCRG00000008658) ENSCCRG00000010963 cyfip2 (ENSCCRG00000011167) foxa (ENSCCRG00000078916) zdhhc24 (ENSCCRG00000070795) ENSCCRG00000062606 urp1 (ENSCCRG00000082583) clic2 (ENSCCRG00000058245) ocrl (ENSCCRG00000047051) apln (ENSCCRG00000018696) xpnpep2 (ENSCCRG00000018705) SASH3 (ENSCCRG00000078288) zdhhc9 (ENSCCRG00000054060) c1galt1c1 (ENSCCRG00000068212) #22 mcts1 (ENSCCRG00000036641) #23 cul4b (ENSCCRG00000036666) #24 lamp2 (ENSCCRG00000068465) #25 ATP1B4 (ENSCCRG00000080059) #26 TMEM255A (ENSCCRG00000001687) #27 NKAP (ENSCCRG00000077871) #30 zbtb33 (ENSCCRG00000079442) #28 upf3b (ENSCCRG00000001835) #34 rpl39 (ENSCCRG00000001881) #35 ENSCCRG00000001885 #36 septin6 (ENSCCRG00000020722) #37 RAB41 (ENSCCRG00000055757) stard14 (ENSCCRG00000008018) pdzd11 (ENSCCRG00000008021) GDPD2 (ENSCCRG00000055182) Golden-line barbel MODERN SPECIES 406 itk (ENSSGRG00000052969) cyfip2 (ENSSGRG00000052973) foxa (ENSSGRG00000053357) zdhhc24 (ENSSGRG00000053358) ENSSGRG00000053360 urp1 (ENSSGRG00000053361) clic2 (ENSSGRG00000053362) ENSSGRG00000053363 ocrl (ENSSGRG00000053366) apln (ENSSGRG00000053778) xpnpep2 (ENSSGRG00000053780) ENSSGRG00000053781 SASH3 (ENSSGRG00000053782) zdhhc9 (ENSSGRG00000053783) c1galt1c1 (ENSSGRG00000053785) #22 mcts1 (ENSSGRG00000053786) #23 cul4b (ENSSGRG00000053801) #24 lamp2 (ENSSGRG00000054171) #25 ATP1B4 (ENSSGRG00000054172) #26 TMEM255A (ENSSGRG00000054173) #27 zbtb33 (ENSSGRG00000054174) #28 ndufa1 (ENSSGRG00000054176) #32 upf3b (ENSSGRG00000054177) #34 rpl39 (ENSSGRG00000054187) #35 ENSSGRG00000054189 #36 septin6 (ENSSGRG00000054190) #37 RAB41 (ENSSGRG00000054191) stard14 (ENSSGRG00000054192) pdzd11 (ENSSGRG00000054195) GDPD2 (ENSSGRG00000054198) Cyprininae ANCESTRAL SPECIES 43 ENSGT00440000033329.a.a.a.f ENSGT00940000165241.a ENSGT00940000158850.m ENSGT00500000044831.a.a.b.f.a ENSGT00940000155999.f.a ENSGT00940000164006.n.b ENSGT01030000234532.A.a.a.a.a.b.k ENSGT00670000099471.b ENSGT00940000161397.d ENSGT00940000163305.a.b ENSGT00940000157996.k ENSGT00390000014020.e ENSGT00940000157196.f ENSGT00940000160111.c ENSGT00940000159999.d.a ENSGT00940000155145.cc #22 ENSGT00550000074964.b #23 ENSGT00940000155339.ib #24 ENSGT00950000182899.B.b.a #25 ENSGT01030000234579.B.a.b #26 ENSGT00940000160471.c #27 ENSGT00940000157481.k #28 ENSGT00940000163102 ENSGT00390000007560.i #32 ENSGT00390000017146.a.u #34 ENSGT00390000014814.b.d.a #35 ENSGT00940000157996.l ENSGT00390000014020.f ENSGT00940000157196.e ENSGT00940000160111.d ENSGT00940000159999.c Goldfish DUPLICATION Goldfish MODERN SPECIES 32 neurog1 (ENSCARG00000011833) ENSCARG00000011840 ENSCARG00000011843 HS3ST1 (ENSCARG00000011848) ENSCARG00000011860 ENSCARG00000011865 ENSCARG00000011870 ENSCARG00000011875 ENSCARG00000011895 slc25a48 (ENSCARG00000011904) neurog1 (ENSCARG00000011917) polr2g (ENSCARG00000011922) eef1g (ENSCARG00000011947) ENSCARG00000012035 zdhhc9 (ENSCARG00000012053) c1galt1c1 (ENSCARG00000012061) #22 mcts1 (ENSCARG00000012063) #23 cul4b (ENSCARG00000012174) #24 lamp2 (ENSCARG00000014210) #25 septin6 (ENSCARG00000014244) #37 ATP1B4 (ENSCARG00000014931) #26 TMEM255A (ENSCARG00000014959) #27 nkap (ENSCARG00000014986) ndufa1 (ENSCARG00000015009) #32 upf3b (ENSCARG00000015026) #34 RPL39 (ENSCARG00000006053) #35 septin6 (ENSCARG00000006082) #37 rab41 (ENSCARG00000006177) pdzd11 (ENSCARG00000006203) stard14 (ENSCARG00000006236) rab41 (ENSCARG00000006285) Goldfish MODERN SPECIES 32 zgc:153146 (ENSCARG00000011661) ENSCARG00000011655 TENM2 (ENSCARG00000010151) ##9 ENSCARG00000010061 foxa (ENSCARG00000010057) zdhhc24 (ENSCARG00000010050) ENSCARG00000010042 urp1 (ENSCARG00000010034) clic2 (ENSCARG00000009992) ENSCARG00000009979 ocrl (ENSCARG00000007200) apln (ENSCARG00000007077) xpnpep2 (ENSCARG00000007031) SASH3 (ENSCARG00000007019) zdhhc9 (ENSCARG00000007000) c1galt1c1 (ENSCARG00000006993) #22 mcts1 (ENSCARG00000006973) #23 cul4b (ENSCARG00000006568) #24 lamp2 (ENSCARG00000006471) #25 ATP1B4 (ENSCARG00000006448) #26 TMEM255A (ENSCARG00000006429) #27 zbtb33 (ENSCARG00000006423) #28 nkap (ENSCARG00000006411) ndufa1 (ENSCARG00000006388) #32 upf3b (ENSCARG00000006357) #34 RPL39 (ENSCARG00000006324) #35 ENSCARG00000006310 #36 rab41 (ENSCARG00000006285) stard14 (ENSCARG00000006236) pdzd11 (ENSCARG00000006203) rab41 (ENSCARG00000006177) Cyprininae_a ANCESTRAL SPECIES 50 ENSGT00440000033329.a.a.a.f ENSGT00940000165241.a ENSGT00940000158850.m ENSGT00500000044831.a.a.b.f.a ENSGT00940000155999.f.a ENSGT00940000164006.n.b ENSGT01030000234532.A.a.a.a.a.b.k ENSGT00670000099471.b ENSGT00940000161397.d ENSGT00940000163305.a.b ENSGT00940000157996.k ENSGT00390000014020.e ENSGT00940000157196.f ENSGT00940000160111.c ENSGT00940000159999.d.a ENSGT00940000155145.cc #22 ENSGT00550000074964.b #23 ENSGT00940000155339.ib #24 ENSGT00950000182899.B.b.b #25 ENSGT01030000234579.B.a.b #26 ENSGT00940000160471.c #27 ENSGT00940000157481.k #28 ENSGT00940000163102 ENSGT00390000017146.a.u #34 ENSGT00390000014814.b.d.a #35 ENSGT00950000183003.a.a.a.b.c #36 ENSGT00940000158026.f #37 ENSGT00940000165821.d ENSGT00940000153222.a.b.b.b.b.x ENSGT00940000159625.b ENSGT00940000159565.w.b Common carp reference MODERN SPECIES 20 ENSCCRG00000014538 ENSCCRG00000008609 itk (ENSCCRG00000014571) cyfip2 (ENSCCRG00000014694) foxa (ENSCCRG00000059016) zdhhc24 (ENSCCRG00000032405) ENSCCRG00000053220 urp1 (ENSCCRG00000015134) clic2 (ENSCCRG00000015137) ENSCCRG00000015146 ocrl (ENSCCRG00000015216) apln (ENSCCRG00000063153) xpnpep2 (ENSCCRG00000051483) SASH3 (ENSCCRG00000062202) zdhhc9 (ENSCCRG00000051478) c1galt1c1 (ENSCCRG00000073239) #22 mcts1 (ENSCCRG00000051477) #23 lamp2 (ENSCCRG00000078454) #25 ATP1B4 (ENSCCRG00000037696) #26 TMEM255A (ENSCCRG00000052972) #27 zbtb33 (ENSCCRG00000020707) #28 nkap (ENSCCRG00000020708) upf3b (ENSCCRG00000072671) #34 rpl39 (ENSCCRG00000020714) #35 ENSCCRG00000051201 #24 ENSCCRG00000077004 #36 septin6 (ENSCCRG00000001959) #37 stard14 (ENSCCRG00000047613) pdzd11 (ENSCCRG00000061764) ENSCCRG00000054295 ENSCCRG00000075092 Golden-line barbel MODERN SPECIES 22 ENSSGRG00000024105 med7 (ENSSGRG00000024106) itk (ENSSGRG00000024107) cyfip2 (ENSSGRG00000024156) foxa (ENSSGRG00000026633) zdhhc24 (ENSSGRG00000026634) ENSSGRG00000026636 urp1 (ENSSGRG00000026637) clic2 (ENSSGRG00000026638) ENSSGRG00000026639 ocrl (ENSSGRG00000026640) xpnpep2 (ENSSGRG00000026761) SASH3 (ENSSGRG00000026764) zdhhc9 (ENSSGRG00000026765) c1galt1c1 (ENSSGRG00000026767) #22 mcts1 (ENSSGRG00000026769) #23 cul4b (ENSSGRG00000026823) #24 lamp2 (ENSSGRG00000028640) #25 ATP1B4 (ENSSGRG00000028645) #26 TMEM255A (ENSSGRG00000028652) #27 zbtb33 (ENSSGRG00000028655) #28 ENSSGRG00000028656 #28 nkap (ENSSGRG00000028658) ndufa1 (ENSSGRG00000028669) #32 ENSSGRG00000028670 ENSSGRG00000028672 #36 septin6 (ENSSGRG00000028675) #37 rab41 (ENSSGRG00000028687) stard14 (ENSSGRG00000029048) pdzd11 (ENSSGRG00000029049) Zebrafish MODERN SPECIES 5 itk (ENSDARG00000017565) cyfip2 (ENSDARG00000036375) foxa (ENSDARG00000087094) ENSDARG00000105392 zdhhc24 (ENSDARG00000105134) ENSDARG00000036383 urp1 (ENSDARG00000093493) clic2 (ENSDARG00000010625) ENSDARG00000074285 ocrl (ENSDARG00000078106) ENSDARG00000105188 apln (ENSDARG00000053279) xpnpep2 (ENSDARG00000026017) SASH3 (ENSDARG00000016541) zdhhc9 (ENSDARG00000060515) c1galt1c1 (ENSDARG00000036335) #22 mcts1 (ENSDARG00000025972) #23 cul4b (ENSDARG00000060510) #24 lamp2 (ENSDARG00000014914) #25 ATP1B4 (ENSDARG00000053262) #26 TMEM255A (ENSDARG00000073911) #27 zbtb33 (ENSDARG00000071467) #28 nkap (ENSDARG00000033450) ndufa1 (ENSDARG00000036329) #32 ENSDARG00000117171 ENSDARG00000033462 ENSDARG00000102969 ENSDARG00000109993 ENSDARG00000111692 upf3b (ENSDARG00000000489) #34 rpl39 (ENSDARG00000036316) #35 Clupeiformes ANCESTRAL SPECIES 809 ENSGT00940000155145 #22 ENSGT00550000074964 #23 Denticle herring MODERN SPECIES 9 ENSDCDG00000027304 pola2 (ENSDCDG00000026640) CHRM1 (ENSDCDG00000026629) ENSDCDG00000026627 ENSDCDG00000026577 ENSDCDG00000026572 spdl1 (ENSDCDG00000026501) SIL1 (ENSDCDG00000026494) ENSDCDG00000026492 ENSDCDG00000026489 ENSDCDG00000026488 csnk1a1 (ENSDCDG00000026463) FBXO38 (ENSDCDG00000026428) fgfrl1b (ENSDCDG00000026418) ENSDCDG00000026416 c1galt1c1 (ENSDCDG00000026410) #22 mcts1 (ENSDCDG00000026409) #23 gcna (ENSDCDG00000026407) CETN1 (ENSDCDG00000026402) nsdhl (ENSDCDG00000026400) ENSDCDG00000026389 ENSDCDG00000026387 POU3F4 (ENSDCDG00000026384) rps6kal (ENSDCDG00000019069) hdx (ENSDCDG00000035133) ENSDCDG00000035093 APOOL (ENSDCDG00000035069) AGTR2 (ENSDCDG00000035066) SH2D1A (ENSDCDG00000035064) #10 TENM1 (ENSDCDG00000034490) #9 ENSDCDG00000034213 Euteleosteomorpha ANCESTRAL SPECIES 9 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 Protacanthopterygii ANCESTRAL SPECIES 71 ENSGT00730000114722 ENSGT00550000074935 ENSGT00940000162460.s ENSGT00940000162460.t ENSGT00940000163435 ENSGT01060000248588.a.c.b ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000163102.e ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 510 ENSGT00910000144269.n ENSGT00730000114722 ENSGT00550000074935.f ENSGT00940000162460.s.c ENSGT00940000162460.t.a ENSGT01060000248588.a.c.b.h ENSGT00940000159999.e.b ENSGT00940000160111.f ENSGT00940000157196 ENSGT00950000184267.c ENSGT00940000164536.b ENSGT00940000157996.m ENSGT00940000163305.a.b ENSGT00940000161397.a ENSGT00670000099471.c ENSGT00940000155145.dc #22 ENSGT00550000074964.e #23 ENSGT00940000155339.lb #24 ENSGT00950000182899.B.b.c #25 Salmoninae_a ANCESTRAL SPECIES 40 ENSGT00910000144269.n ENSGT00730000114722 ENSGT00550000074935.f ENSGT00940000162460.s.c ENSGT00940000162460.t.a ENSGT01060000248588.a.c.b.h ENSGT00940000159999.e.b ENSGT00940000160111.f ENSGT00940000157196 ENSGT00950000184267.c ENSGT00940000164536.b ENSGT00940000157996.m ENSGT00940000163305.a.b ENSGT00940000161397.a ENSGT00670000099471.c ENSGT00940000155145.dc #22 ENSGT00550000074964.e #23 ENSGT00940000155339.lb #24 ENSGT00950000182899.B.b.c.a #25 ENSGT01030000234579.B.a.f #26 ENSGT00940000160471.b #27 ENSGT00940000157481.p #28 ENSGT00940000160787.k #30 ENSGT00940000165512 ENSGT00940000163102.e ENSGT00390000007560.b #32 ENSGT00390000017146.a.cb #34 ENSGT00730000112008 ENSGT00940000158026.g #37 ENSGT00940000157256.k ENSGT00940000155075.a.b.d Salmo ANCESTRAL SPECIES 43 ENSGT00910000144269.n ENSGT00730000114722 ENSGT00550000074935.f ENSGT00940000162460.s.c ENSGT00940000162460.t.a ENSGT01060000248588.a.c.b.h ENSGT00940000159999.e.b ENSGT00940000160111.f ENSGT00940000157196 ENSGT00950000184267.c ENSGT00940000164536.b ENSGT00940000157996.m ENSGT00940000163305.a.b ENSGT00940000161397.a ENSGT00670000099471.c ENSGT00940000155145.dc #22 ENSGT00550000074964.e #23 ENSGT00940000155339.lb #24 ENSGT00950000182899.B.b.c.a #25 ENSGT01030000234579.B.a.f #26 ENSGT00940000160471.b #27 ENSGT00940000157481.p #28 ENSGT00940000163102.e ENSGT00390000007560.b #32 ENSGT00390000017146.a.cb #34 ENSGT00730000112008 ENSGT00940000158026.g #37 ENSGT00940000157256.k ENSGT00940000155075.a.b.d ENSGT00940000157039.a.c ENSGT00480000042679.a.f Atlantic salmon MODERN SPECIES 28 ENSSSAG00000089265 ENSSSAG00000015654 GSTP1 (ENSSSAG00000015608) GSTP1 (ENSSSAG00000015545) ENSSSAG00000103931 ENSSSAG00000086375 trpc3 (ENSSSAG00000007622) zdhhc9 (ENSSSAG00000003628) SLY (ENSSSAG00000007527) xpnpep2 (ENSSSAG00000007487) ENSSSAG00000007477 ocrl (ENSSSAG00000007081) ENSSSAG00000007050 clic2 (ENSSSAG00000121476) urp1 (ENSSSAG00000007021) ENSSSAG00000007017 #22 ENSSSAG00000120727 cul4b (ENSSSAG00000074834) #24 lamp2 (ENSSSAG00000074801) #25 atp1b4 (ENSSSAG00000074797) #26 ENSSSAG00000074793 TMEM255A (ENSSSAG00000089014) #27 zbtb33 (ENSSSAG00000082359) #28 nkap (ENSSSAG00000074788) ndufa1 (ENSSSAG00000074786) #32 upf3b (ENSSSAG00000116338) #34 ENSSSAG00000074773 SEPTIN6 (ENSSSAG00000095532) #37 nkrf (ENSSSAG00000074734) ube2a (ENSSSAG00000091743) elf1 (ENSSSAG00000074725) River trout MODERN SPECIES 4 PIGG (ENSSTUG00000004654) ENSSTUG00000004648 fnta (ENSSTUG00000004574) GSTP1 (ENSSTUG00000004519) ENSSTUG00000004465 trpc3 (ENSSTUG00000004389) zdhhc9 (ENSSTUG00000004365) SASH3 (ENSSTUG00000004339) xpnpep2 (ENSSTUG00000004232) ENSSTUG00000004190 ENSSTUG00000004157 ocrl (ENSSTUG00000003142) ENSSTUG00000002983 clic2 (ENSSTUG00000002923) ENSSTUG00000002916 c1galt1c1 (ENSSTUG00000002910) #22 mcts1 (ENSSTUG00000002856) #23 cul4b (ENSSTUG00000002266) #24 lamp2 (ENSSTUG00000002147) #25 ATP1B4 (ENSSTUG00000002132) #26 TMEM255A (ENSSTUG00000002104) #27 zbtb33 (ENSSTUG00000002095) #28 nkap (ENSSTUG00000002088) ndufa1 (ENSSTUG00000002079) #32 upf3b (ENSSTUG00000002047) #34 rpl39 (ENSSTUG00000002038) #35 ENSSTUG00000001780 septin6 (ENSSTUG00000001494) #37 nkrf (ENSSTUG00000001224) ube2a (ENSSTUG00000024524) elf1 (ENSSTUG00000024507) Oncorhynchus ANCESTRAL SPECIES 39 ENSGT00910000144269.n ENSGT00550000074935.f ENSGT00940000162460.s.c ENSGT00940000162460.t.a ENSGT01060000248588.a.c.b.h ENSGT00940000159999.e.b ENSGT00940000160111.f ENSGT00940000157196.l ENSGT00950000184267.c ENSGT00940000164536.b ENSGT00940000157996.m ENSGT00940000163305.a.b ENSGT00940000161397.a ENSGT00670000099471.c ENSGT00550000074964.e.a.a #23 ENSGT00940000155145.dc #22 ENSGT00550000074964.e.b #23 ENSGT00940000155339.lb #24 ENSGT00950000182899.B.b.c.a #25 ENSGT01030000234579.B.a.f #26 ENSGT00940000160471.b #27 ENSGT00940000157481.p #28 ENSGT00940000160787.k #30 ENSGT00940000165512 ENSGT00390000017146.a.cb #34 ENSGT00730000112008 ENSGT00940000158026.g #37 ENSGT00940000157256.k ENSGT00940000155075.a.b.d ENSGT00940000157039.a.c ENSGT00480000042679.a.f Oncorhynchus_a ANCESTRAL SPECIES 40 ENSGT00910000144269.n ENSGT00550000074935.f ENSGT00940000162460.s.c ENSGT00940000162460.t.a ENSGT01060000248588.a.c.b.h ENSGT00940000159999.e.b ENSGT00940000160111.f ENSGT00940000157196.l ENSGT00950000184267.c ENSGT00950000184267.d.b ENSGT00940000164536.b ENSGT00940000157996.m ENSGT00940000163305.a.b ENSGT00940000161397.a ENSGT00670000099471.c ENSGT00940000155145.dc #22 ENSGT00550000074964.e.b #23 ENSGT00940000155339.lb #24 ENSGT00950000182899.B.b.c.a #25 ENSGT01030000234579.B.a.f #26 ENSGT00940000160471.b #27 ENSGT00940000157481.p #28 ENSGT00940000160787.k #30 ENSGT00940000165512 ENSGT00390000017146.a.cb #34 ENSGT00730000112008 ENSGT00940000158026.g #37 ENSGT00940000157256.k ENSGT00940000155075.a.b.d ENSGT00940000157039.a.c ENSGT00480000042679.a.f Chinook salmon MODERN SPECIES 32 kctd8 (ENSOTSG00005046224) PIGG (ENSOTSG00005046227) fnta (ENSOTSG00005046234) GSTP1 (ENSOTSG00005046238) ENSOTSG00005046241 trpc3 (ENSOTSG00005046251) zdhhc9 (ENSOTSG00005046456) SASH3 (ENSOTSG00005046457) xpnpep2 (ENSOTSG00005046458) ENSOTSG00005046459 ENSOTSG00005046460 ocrl (ENSOTSG00005046463) ENSOTSG00005000845 clic2 (ENSOTSG00005000992) urp1 (ENSOTSG00005001173) c1galt1c1 (ENSOTSG00005001178) #22 mcts1 (ENSOTSG00005001181) #23 cul4b (ENSOTSG00005001231) #24 lamp2 (ENSOTSG00005003281) #25 ATP1B4 (ENSOTSG00005003289) #26 TMEM255A (ENSOTSG00005003292) #27 zbtb33 (ENSOTSG00005003295) #28 NKAP (ENSOTSG00005003297) #30 ENSOTSG00005003299 upf3b (ENSOTSG00005003300) #34 rpl39 (ENSOTSG00005003308) #35 ENSOTSG00005003311 septin6 (ENSOTSG00005003315) #37 nkrf (ENSOTSG00005003319) ube2a (ENSOTSG00005003321) elf1 (ENSOTSG00005003325) Coho salmon MODERN SPECIES 6 FNTA (ENSOKIG00005025762) GSTP1 (ENSOKIG00005025843) ENSOKIG00005025921 trpc3 (ENSOKIG00005025968) zdhhc9 (ENSOKIG00005026148) SASH3 (ENSOKIG00005026158) xpnpep2 (ENSOKIG00005026173) ENSOKIG00005026327 ENSOKIG00005026348 ENSOKIG00005026374 ocrl (ENSOKIG00005026472) ENSOKIG00005028808 ENSOKIG00005028812 clic2 (ENSOKIG00005028843) urp1 (ENSOKIG00005028901) ENSOKIG00005028934 #22 mcts1 (ENSOKIG00005028944) #23 cul4b (ENSOKIG00005029109) #24 lamp2 (ENSOKIG00005031274) #25 ATP1B4 (ENSOKIG00005031402) #26 TMEM255A (ENSOKIG00005031415) #27 zbtb33 (ENSOKIG00005031424) #28 NKAP (ENSOKIG00005031434) #30 ENSOKIG00005031442 ENSOKIG00005031447 upf3b (ENSOKIG00005031465) #34 rpl39 (ENSOKIG00005031542) #35 ENSOKIG00005031547 septin6 (ENSOKIG00005031576) #37 nkrf (ENSOKIG00005031646) ube2a (ENSOKIG00005031660) Rainbow trout MODERN SPECIES 23 fnta (ENSOMYG00000045716) ENSOMYG00000045733 ENSOMYG00000070946 ENSOMYG00000063893 trpc3 (ENSOMYG00000045768) zdhhc9 (ENSOMYG00000045850) SASH3 (ENSOMYG00000045855) xpnpep2 (ENSOMYG00000045880) ENSOMYG00000045907 ENSOMYG00000045913 ocrl (ENSOMYG00000045954) ENSOMYG00000046146 clic2 (ENSOMYG00000046163) urp1 (ENSOMYG00000069067) ENSOMYG00000075055 #23 c1galt1c1 (ENSOMYG00000046184) #22 CUL4B (ENSOMYG00000046294) #24 lamp2 (ENSOMYG00000050632) #25 ATP1B4 (ENSOMYG00000046594) #26 ENSOMYG00000059548 TMEM255A (ENSOMYG00000046604) #27 zbtb33 (ENSOMYG00000046611) #28 NKAP (ENSOMYG00000046617) #30 upf3b (ENSOMYG00000046629) #34 rpl39 (ENSOMYG00000046635) #35 ENSOMYG00000046601 septin6 (ENSOMYG00000046699) #37 NKRF (ENSOMYG00000046805) UBE2A (ENSOMYG00000046809) elf1 (ENSOMYG00000046815) tnmd (ENSOMYG00000021146) Huchen MODERN SPECIES 158 kctd8 (ENSHHUG00000051845) PIGG (ENSHHUG00000051840) fnta (ENSHHUG00000051831) GSTP1 (ENSHHUG00000051830) GSTP1 (ENSHHUG00000051829) trpc3 (ENSHHUG00000051827) zdhhc9 (ENSHHUG00000051821) SASH3 (ENSHHUG00000051816) xpnpep2 (ENSHHUG00000051793) ENSHHUG00000051791 ENSHHUG00000051781 ocrl (ENSHHUG00000051754) ENSHHUG00000051748 clic2 (ENSHHUG00000051739) urp1 (ENSHHUG00000051734) c1galt1c1 (ENSHHUG00000051733) #22 mcts1 (ENSHHUG00000051714) #23 cul4b (ENSHHUG00000051699) #24 lamp2 (ENSHHUG00000051694) #25 ATP1B4 (ENSHHUG00000051686) #26 TMEM255A (ENSHHUG00000051681) #27 Salmoninae ANCESTRAL SPECIES 356 ENSGT00940000159999.e.a ENSGT00940000160111.e ENSGT00950000184267.d ENSGT00940000157996.n ENSGT00940000161397.b ENSGT00670000099471.d ENSGT00940000155145.ec #22 ENSGT00550000074964.f #23 ENSGT00940000155339.mb #24 ENSGT00950000182899.B.b.d #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471.b #27 ENSGT00940000157481.p #28 ENSGT00940000160787.k #30 ENSGT01070000254908 ENSGT00730000112008 ENSGT00940000158026.g #37 ENSGT00940000157256.k ENSGT00940000155075.a.b.d ENSGT00940000157039.a.c ENSGT00480000042679.a.f ENSGT00940000159162.c Salmoninae_a ANCESTRAL SPECIES 18 ENSGT00390000011368.c.b ENSGT00940000159958.e ENSGT00950000183159.a.v.b.c ENSGT00940000161041.h ENSGT00910000144269.m ENSGT00550000074935.e ENSGT00940000163435 ENSGT01000000220458 ENSGT01060000248588.a.c.b.g ENSGT00940000159999.e.a ENSGT00940000160111.e ENSGT00950000184267.d.a ENSGT00940000157996.n ENSGT00940000161397.b ENSGT00670000099471.d ENSGT00940000155145.ec #22 ENSGT00550000074964.f #23 ENSGT00940000155339.mb #24 ENSGT00950000182899.B.b.d.a #25 ENSGT01030000234579.B.a.e #26 ENSGT00940000160471.a #27 ENSGT00940000157481.o #28 ENSGT00940000163102.f ENSGT00390000007560.a #32 ENSGT00390000017146.a.bb #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT01000000220621 ENSGT00940000158026.h #37 ENSGT00940000157256.l ENSGT00940000155075.a.b.c Salmo ANCESTRAL SPECIES 24 ENSGT00390000011368.c.b ENSGT00940000159958.e ENSGT00950000183159.a.v.b.c ENSGT00940000161041.h ENSGT00910000144269.m ENSGT00550000074935.e ENSGT00940000163435 ENSGT01000000220458 ENSGT01060000248588.a.c.b.g ENSGT00940000159999.e.a ENSGT00940000160111.e ENSGT00950000184267.d.a ENSGT00940000157996.n ENSGT00940000161397.b ENSGT00670000099471.d ENSGT00940000155145.ec #22 ENSGT00550000074964.f #23 ENSGT00940000155339.mb #24 ENSGT00950000182899.B.b.d.a #25 ENSGT01030000234579.B.a.e #26 ENSGT00940000160471.a #27 ENSGT00940000157481.o #28 ENSGT00940000163102.f ENSGT00390000007560.a #32 ENSGT00390000017146.a.bb #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT01000000220621 ENSGT00940000158026.h #37 ENSGT00940000157256.l ENSGT00940000155075.a.b.c River trout MODERN SPECIES 22 phox2bb (ENSSTUG00000022498) LIMCH1 (ENSSTUG00000022378) kctd8 (ENSSTUG00000022366) PIGG (ENSSTUG00000021813) fnta (ENSSTUG00000021675) gstp1.2 (ENSSTUG00000021624) ENSSTUG00000021544 trpc3 (ENSSTUG00000021342) zdhhc9 (ENSSTUG00000021313) SASH3 (ENSSTUG00000021275) ENSSTUG00000021268 ocrl (ENSSTUG00000020455) ENSSTUG00000020406 clic2 (ENSSTUG00000020381) urp1 (ENSSTUG00000020372) c1galt1c1 (ENSSTUG00000020369) #22 mcts1 (ENSSTUG00000020362) #23 cul4b (ENSSTUG00000019454) #24 lamp2 (ENSSTUG00000019283) #25 ATP1B4 (ENSSTUG00000019262) #26 TMEM255A (ENSSTUG00000019245) #27 zbtb33 (ENSSTUG00000019243) #28 ndufa1 (ENSSTUG00000019228) #32 upf3b (ENSSTUG00000019183) #34 ENSSTUG00000019173 #36 septin6 (ENSSTUG00000018980) #37 nkrf (ENSSTUG00000018962) ube2a (ENSSTUG00000018949) elf1 (ENSSTUG00000018919) tnmd (ENSSTUG00000018902) pcdh19 (ENSSTUG00000018864) Atlantic salmon MODERN SPECIES 24 ENSSSAG00000003772 ENSSSAG00000120090 ENSSSAG00000003736 ENSSSAG00000120829 GSTP1 (ENSSSAG00000003722) ENSSSAG00000003688 ENSSSAG00000118932 trpc3 (ENSSSAG00000003652) ENSSSAG00000113194 zdhhc9 (ENSSSAG00000094435) SLY (ENSSSAG00000003617) ENSSSAG00000103331 ocrl (ENSSSAG00000003420) clic2 (ENSSSAG00000086481) urp1 (ENSSSAG00000003350) ENSSSAG00000120399 #22 tma20 (ENSSSAG00000003328) #23 ENSSSAG00000091991 CUL4B (ENSSSAG00000002551) #24 lamp2 (ENSSSAG00000002337) #25 ATP1B4 (ENSSSAG00000002283) #26 TMEM255A (ENSSSAG00000103537) #27 zbtb33 (ENSSSAG00000002257) #28 nkap (ENSSSAG00000002243) ndufa1 (ENSSSAG00000109017) #32 upf3b (ENSSSAG00000002179) #34 rpl39 (ENSSSAG00000002154) #35 ANR57 (ENSSSAG00000002143) #36 ENSSSAG00000002135 septin6 (ENSSSAG00000002107) #37 NKRF (ENSSSAG00000002080) Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000159958.e ENSGT00950000183159.a.v.b.c ENSGT00940000161041.h ENSGT00910000144269.m ENSGT00550000074935.e ENSGT00940000162460.s.d ENSGT00940000163435 ENSGT01000000220458 ENSGT01060000248588.a.c.b.g ENSGT00940000159999.e.a ENSGT00940000160111.e ENSGT00950000184267.d.a ENSGT00940000157996.n ENSGT00940000161397.b ENSGT00670000099471.d ENSGT00940000155145.ec #22 ENSGT00550000074964.f #23 ENSGT00940000155339.mb #24 ENSGT00950000182899.B.b.d.a #25 ENSGT01030000234579.B.a.e #26 ENSGT00940000160471.a #27 ENSGT00940000157481.o #28 ENSGT00940000160787.l #30 ENSGT00390000007560.a #32 ENSGT00390000017146.a.bb #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT01000000220621 ENSGT00940000158026.h #37 ENSGT00940000157256.l ENSGT00940000155075.a.b.c Rainbow trout MODERN SPECIES 5 ENSOMYG00000034691 ENSOMYG00000034756 ENSOMYG00000075151 fnta (ENSOMYG00000035581) gstp1.2 (ENSOMYG00000036304) ENSOMYG00000036318 trpc3 (ENSOMYG00000036455) ENSOMYG00000051688 ENSOMYG00000049090 ZDHHC9 (ENSOMYG00000036942) SASH3 (ENSOMYG00000036953) ENSOMYG00000037006 ocrl (ENSOMYG00000037076) clic2 (ENSOMYG00000037214) urp1 (ENSOMYG00000076289) ENSOMYG00000037232 #22 mcts1 (ENSOMYG00000036979) #23 CUL4B (ENSOMYG00000037516) #24 lamp2 (ENSOMYG00000068139) #25 ATP1B4 (ENSOMYG00000020728) #26 TMEM255A (ENSOMYG00000020752) #27 zbtb33 (ENSOMYG00000073207) #28 ndufa1 (ENSOMYG00000020779) #32 upf3b (ENSOMYG00000020794) #34 rpl39 (ENSOMYG00000020823) #35 ENSOMYG00000020856 #36 ENSOMYG00000020863 septin6 (ENSOMYG00000020938) #37 NKRF (ENSOMYG00000021107) UBE2A (ENSOMYG00000021111) ENSOMYG00000063356 Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00390000011368.c.b ENSGT00940000159958.e ENSGT00950000183159.a.v.b.c ENSGT00940000161041.h ENSGT00910000144269.m ENSGT00550000074935.e ENSGT00940000162460.s.d ENSGT01000000220458 ENSGT01060000248588.a.c.b.g ENSGT00940000159999.e.a ENSGT00940000160111.e ENSGT00950000184267.d.a ENSGT00940000157996.n ENSGT00940000161397.b ENSGT00670000099471.d ENSGT00940000155145.ec #22 ENSGT00550000074964.f #23 ENSGT00940000155339.mb #24 ENSGT00950000182899.B.b.d.a #25 ENSGT01030000234579.B.a.e #26 ENSGT00940000160471.a #27 ENSGT00940000157481.o #28 ENSGT00940000160787.l #30 ENSGT00390000007560.a #32 ENSGT00390000017146.a.bb #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT01000000220621 ENSGT00940000158026.h #37 ENSGT00940000157256.l ENSGT00940000155075.a.b.c Coho salmon MODERN SPECIES 10 phox2bb (ENSOKIG00005019251) LIMCH1 (ENSOKIG00005019393) kctd8 (ENSOKIG00005021282) PIGG (ENSOKIG00005021325) fnta (ENSOKIG00005021976) GSTP1 (ENSOKIG00005022083) ENSOKIG00005022099 trpc3 (ENSOKIG00005022153) zdhhc9 (ENSOKIG00005022345) SASH3 (ENSOKIG00005022366) ENSOKIG00005022397 ENSOKIG00005022410 ocrl (ENSOKIG00005022738) clic2 (ENSOKIG00005026328) urp1 (ENSOKIG00005026375) c1galt1c1 (ENSOKIG00005026383) #22 mcts1 (ENSOKIG00005026387) #23 CUL4B (ENSOKIG00005026464) #24 lamp2 (ENSOKIG00005026726) #25 ATP1B4 (ENSOKIG00005026757) #26 TMEM255A (ENSOKIG00005026769) #27 zbtb33 (ENSOKIG00005026779) #28 ENSOKIG00005026791 #30 ndufa1 (ENSOKIG00005026818) #32 upf3b (ENSOKIG00005026841) #34 rpl39 (ENSOKIG00005027088) #35 ENSOKIG00005027126 #36 ENSOKIG00005027134 septin6 (ENSOKIG00005027232) #37 NKRF (ENSOKIG00005027597) UBE2A (ENSOKIG00005027617) Huchen MODERN SPECIES 743 ENSHHUG00000028018 ocrl (ENSHHUG00000027839) clic2 (ENSHHUG00000027821) urp1 (ENSHHUG00000027816) c1galt1c1 (ENSHHUG00000027813) #22 mcts1 (ENSHHUG00000027806) #23 cul4b (ENSHHUG00000027656) #24 lamp2 (ENSHHUG00000027622) #25 ATP1B4 (ENSHHUG00000027618) #26 TMEM255A (ENSHHUG00000027588) #27 zbtb33 (ENSHHUG00000027585) #28 ndufa1 (ENSHHUG00000027574) #32 upf3b (ENSHHUG00000027568) #34 rpl39 (ENSHHUG00000027554) #35 SOWAHD (ENSHHUG00000027552) #36 septin6 (ENSHHUG00000026433) #37 nkrf (ENSHHUG00000026410) ube2a (ENSHHUG00000026407) elf1 (ENSHHUG00000026397) tnmd (ENSHHUG00000026389) Northern pike MODERN SPECIES 3 gstp1 (ENSELUG00000019437) gstp1 (ENSELUG00000019492) trpc3 (ENSELUG00000019574) zdhhc9 (ENSELUG00000019636) ENSELUG00000026083 SASH3 (ENSELUG00000019663) xpnpep2 (ENSELUG00000019691) ENSELUG00000025234 ENSELUG00000032112 ENSELUG00000019724 ocrl (ENSELUG00000019958) ENSELUG00000020020 clic2 (ENSELUG00000020042) urp1 (ENSELUG00000020051) ENSELUG00000031913 c1galt1c1 (ENSELUG00000000884) #22 mcts1 (ENSELUG00000033593) #23 cul4b (ENSELUG00000020172) #24 lamp2 (ENSELUG00000020213) #25 ATP1B4 (ENSELUG00000020238) #26 TMEM255A (ENSELUG00000020281) #27 zbtb33 (ENSELUG00000020291) #28 nkap (ENSELUG00000020360) ndufa1 (ENSELUG00000030454) #32 upf3b (ENSELUG00000020389) #34 rpl39 (ENSELUG00000020406) #35 ENSELUG00000020397 #36 ENSELUG00000020461 septin6 (ENSELUG00000020499) #37 nkrf (ENSELUG00000020577) ube2a (ENSELUG00000020560) Acanthomorphata ANCESTRAL SPECIES 1 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Cod MODERN SPECIES 1 xkrx (ENSGMOG00000005111) nox1 (ENSGMOG00000005121) cstf2 (ENSGMOG00000005145) mid1ip1l (ENSGMOG00000028803) tspan7 (ENSGMOG00000005225) ENSGMOG00000005238 SYTL4 (ENSGMOG00000005253) zdhhc9 (ENSGMOG00000005283) SASH3 (ENSGMOG00000005306) xpnpep2 (ENSGMOG00000005338) ENSGMOG00000023833 ocrl (ENSGMOG00000005366) ENSGMOG00000005419 clic2 (ENSGMOG00000005434) urp1 (ENSGMOG00000026552) ENSGMOG00000020191 #22 ENSGMOG00000005450 #23 ENSGMOG00000005532 ENSGMOG00000030469 ##36 ENSGMOG00000032759 hspa4b (ENSGMOG00000005602) gnpda1 (ENSGMOG00000005643) ENSGMOG00000024027 fgf1a (ENSGMOG00000005658) nr3c1 (ENSGMOG00000005668) kctd16a (ENSGMOG00000005691) ENSGMOG00000022664 kif3a (ENSGMOG00000005722) ENSGMOG00000005751 zdhhc15b (ENSGMOG00000005836) UPRT (ENSGMOG00000005875) Euacanthomorphacea ANCESTRAL SPECIES 10 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00950000184267 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Pinecone sodierfish MODERN SPECIES 1 cstf2 (ENSMMDG00005019265) ENSMMDG00005019263 mid1ip1l (ENSMMDG00005019262) tspan7 (ENSMMDG00005019259) SRPX2 (ENSMMDG00005019246) sytl4 (ENSMMDG00005019243) trmt12 (ENSMMDG00005019241) zdhhc9 (ENSMMDG00005019239) SASH3 (ENSMMDG00005019230) xpnpep2 (ENSMMDG00005019220) ENSMMDG00005019212 ocrl (ENSMMDG00005017046) ENSMMDG00005017014 clic2 (ENSMMDG00005017003) urp1 (ENSMMDG00005017000) c1galt1c1 (ENSMMDG00005016999) #22 mcts1 (ENSMMDG00005016998) #23 cul4b (ENSMMDG00005015603) #24 lamp2 (ENSMMDG00005015563) #25 ATP1B4 (ENSMMDG00005015562) #26 TMEM255A (ENSMMDG00005015561) #27 zbtb33 (ENSMMDG00005015560) #28 ENSMMDG00005015559 ndufa1 (ENSMMDG00005015558) #32 upf3b (ENSMMDG00005015530) #34 rpl39 (ENSMMDG00005015523) #35 SOWAHD (ENSMMDG00005015521) #36 ENSMMDG00005015519 septin6 (ENSMMDG00005012003) #37 nkrf (ENSMMDG00005011968) ube2a (ENSMMDG00005011944) Percomorphaceae ANCESTRAL SPECIES 11 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Tiger tail seahorse MODERN SPECIES 239 hnrnpaba (ENSHCOG00000015341) phykpl (ENSHCOG00000000425) phykpl (ENSHCOG00000015285) FAM53C (ENSHCOG00000015266) ctbp1 (ENSHCOG00000015251) spon2a (ENSHCOG00000015232) ENSHCOG00000015220 KDM3B (ENSHCOG00000015205) reep2 (ENSHCOG00000015183) egr1 (ENSHCOG00000000419) ENSHCOG00000015170 adra1bb (ENSHCOG00000015158) ENSHCOG00000015152 clic2 (ENSHCOG00000015115) urp1 (ENSHCOG00000015101) c1galt1c1 (ENSHCOG00000015093) #22 mcts1 (ENSHCOG00000015082) #23 cul4b (ENSHCOG00000015035) #24 lamp2 (ENSHCOG00000014974) #25 KLB (ENSHCOG00000014926) ube2ka (ENSHCOG00000014807) CHRNA9 (ENSHCOG00000014776) ENSHCOG00000014640 APBB2 (ENSHCOG00000014615) ENSHCOG00000014611 bicc2 (ENSHCOG00000014603) SPOCK1 (ENSHCOG00000014571) etf1a (ENSHCOG00000014543) fbxw11a (ENSHCOG00000014517) fgf18a (ENSHCOG00000014470) ENSHCOG00000014457 Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Ovalentaria ANCESTRAL SPECIES 15 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Oryzias ANCESTRAL SPECIES 33 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Oryzias_b ANCESTRAL SPECIES 23 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 Indian medaka MODERN SPECIES 16 ENSOMEG00000015442 ENSOMEG00000015425 tspan7 (ENSOMEG00000015365) SRPX2 (ENSOMEG00000015312) sytl4 (ENSOMEG00000015292) trmt12 (ENSOMEG00000015267) zdhhc9 (ENSOMEG00000015254) SASH3 (ENSOMEG00000015234) xpnpep2 (ENSOMEG00000015211) apln (ENSOMEG00000015189) ENSOMEG00000015185 ocrl (ENSOMEG00000015169) ENSOMEG00000015120 clic2 (ENSOMEG00000015085) urp1 (ENSOMEG00000015052) c1galt1c1 (ENSOMEG00000015022) #22 mcts1 (ENSOMEG00000000379) #23 cul4b (ENSOMEG00000014970) #24 lamp2 (ENSOMEG00000014883) #25 ATP1B4 (ENSOMEG00000014833) #26 TMEM255A (ENSOMEG00000014811) #27 zbtb33 (ENSOMEG00000014785) #28 nkap (ENSOMEG00000014774) ndufa1 (ENSOMEG00000014746) #32 upf3b (ENSOMEG00000014736) #34 rpl39 (ENSOMEG00000014714) #35 ENSOMEG00000014675 #36 ENSOMEG00000014668 septin6 (ENSOMEG00000014650) #37 nkrf (ENSOMEG00000014617) ube2a (ENSOMEG00000014606) Javanese ricefish MODERN SPECIES 1 ENSOJAG00000014135 mid1ip1l (ENSOJAG00000014153) tspan7 (ENSOJAG00000014175) SRPX2 (ENSOJAG00000014201) sytl4 (ENSOJAG00000014286) trmt12 (ENSOJAG00000014348) zdhhc9 (ENSOJAG00000014360) SASH3 (ENSOJAG00000014380) xpnpep2 (ENSOJAG00000014486) ENSOJAG00000015860 ENSOJAG00000015868 ocrl (ENSOJAG00000015939) ENSOJAG00000017259 clic2 (ENSOJAG00000017281) urp1 (ENSOJAG00000017324) c1galt1c1 (ENSOJAG00000017330) #22 mcts1 (ENSOJAG00000017334) #23 cul4b (ENSOJAG00000017426) #24 lamp2 (ENSOJAG00000018685) #25 ATP1B4 (ENSOJAG00000018689) #26 TMEM255A (ENSOJAG00000018703) #27 zbtb33 (ENSOJAG00000018725) #28 nkap (ENSOJAG00000018749) ndufa1 (ENSOJAG00000018763) #32 upf3b (ENSOJAG00000018788) #34 rpl39 (ENSOJAG00000018815) #35 SOWAHD (ENSOJAG00000018833) #36 ENSOJAG00000018842 septin6 (ENSOJAG00000018860) #37 nkrf (ENSOJAG00000018926) ube2a (ENSOJAG00000018935) Oryzias_a ANCESTRAL SPECIES 19 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000160787 #30 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 Japanese Medaka HdrR MODERN SPECIES 1 cstf2 (ENSORLG00000001380) ENSORLG00000030493 tspan7 (ENSORLG00000001343) SRPX2 (ENSORLG00000001311) sytl4 (ENSORLG00000001298) trmt12 (ENSORLG00000001280) zdhhc9 (ENSORLG00000001271) SASH3 (ENSORLG00000001261) xpnpep2 (ENSORLG00000001251) apln (ENSORLG00000027614) ENSORLG00000001202 ocrl (ENSORLG00000001194) ENSORLG00000001161 urp1 (ENSORLG00000029011) clic2 (ENSORLG00000021812) c1galt1c1 (ENSORLG00000001122) #22 mcts1 (ENSORLG00000030590) #23 cul4b (ENSORLG00000001110) #24 lamp2 (ENSORLG00000001072) #25 ENSORLG00000027150 ATP1B4 (ENSORLG00000001069) #26 TMEM255A (ENSORLG00000001054) #27 zbtb33 (ENSORLG00000001040) #28 nkap (ENSORLG00000001037) ndufa1 (ENSORLG00000030294) #32 upf3b (ENSORLG00000001026) #34 rpl39 (ENSORLG00000030471) ##35 ENSORLG00000026681 #36 ENSORLG00000001012 septin6 (ENSORLG00000000997) #37 nkrf (ENSORLG00000022867) Chinese medaka MODERN SPECIES 771 ENSOSIG00000021812 mid1ip1l (ENSOSIG00000021816) tspan7 (ENSOSIG00000021820) SRPX2 (ENSOSIG00000021838) sytl4 (ENSOSIG00000021876) trmt12 (ENSOSIG00000021880) zdhhc9 (ENSOSIG00000021885) SASH3 (ENSOSIG00000021889) xpnpep2 (ENSOSIG00000021929) ENSOSIG00000022069 ENSOSIG00000022072 ocrl (ENSOSIG00000022080) ENSOSIG00000022096 clic2 (ENSOSIG00000022102) urp1 (ENSOSIG00000022108) c1galt1c1 (ENSOSIG00000022111) #22 mcts1 (ENSOSIG00000022112) #23 cul4b (ENSOSIG00000022195) #24 lamp2 (ENSOSIG00000022662) #25 ATP1B4 (ENSOSIG00000022667) #26 TMEM255A (ENSOSIG00000022681) #27 zbtb33 (ENSOSIG00000022682) #28 NKAP (ENSOSIG00000022689) #30 upf3b (ENSOSIG00000004130) #34 rpl39 (ENSOSIG00000004136) #35 SOWAHD (ENSOSIG00000004141) #36 ENSOSIG00000004143 nkrf (ENSOSIG00000004219) ube2a (ENSOSIG00000007522) elf1 (ENSOSIG00000007523) tnmd (ENSOSIG00000007524) Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Aplocheiloidei ANCESTRAL SPECIES 13 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Mangrove rivulus MODERN SPECIES 10 mid1ip1l (ENSKMAG00000000988) tspan7 (ENSKMAG00000000951) SRPX2 (ENSKMAG00000000937) sytl4 (ENSKMAG00000000923) trmt12 (ENSKMAG00000000891) zdhhc9 (ENSKMAG00000000842) SASH3 (ENSKMAG00000000832) xpnpep2 (ENSKMAG00000000804) apln (ENSKMAG00000000787) ENSKMAG00000000777 ENSKMAG00000000737 ocrl (ENSKMAG00000000622) ENSKMAG00000000526 clic2 (ENSKMAG00000000486) urp1 (ENSKMAG00000000477) c1galt1c1 (ENSKMAG00000000470) #22 mcts1 (ENSKMAG00000000443) #23 cul4b (ENSKMAG00000000329) #24 lamp2 (ENSKMAG00000000208) #25 ATP1B4 (ENSKMAG00000000197) #26 TMEM255A (ENSKMAG00000000184) #27 zbtb33 (ENSKMAG00000000155) #28 nkap (ENSKMAG00000020316) ndufa1 (ENSKMAG00000000143) #32 upf3b (ENSKMAG00000020300) #34 rpl39 (ENSKMAG00000020282) ##35 ENSKMAG00000020259 septin6 (ENSKMAG00000020207) #37 nkrf (ENSKMAG00000020188) ube2a (ENSKMAG00000020170) elf1 (ENSKMAG00000020138) Turquoise killifish MODERN SPECIES 1610 UBE2A (ENSNFUG00015009425) NKRF (ENSNFUG00015009465) SEPT6 (ENSNFUG00015009500) #37 ENSNFUG00015000184 SOWAHD (ENSNFUG00015000197) #36 rpl39 (ENSNFUG00015000213) #35 upf3b (ENSNFUG00015000230) #34 BX004980.1 (ENSNFUG00015000247) ENSNFUG00015000294 ENSNFUG00015000306 ocrl (ENSNFUG00015000351) ENSNFUG00015000453 ENSNFUG00015000459 clic2 (ENSNFUG00015000467) URP1 (ENSNFUG00015000479) c1galt1c1 (ENSNFUG00015000486) #22 MCTS1 (ENSNFUG00015000494) #23 CUL4B (ENSNFUG00015000659) #24 lamp2 (ENSNFUG00015000988) #25 ATP1B4 (ENSNFUG00015000998) #26 TMEM255A (ENSNFUG00015001009) #27 ZBTB33 (ENSNFUG00015001019) #28 ENSNFUG00015001021 ndufa1 (ENSNFUG00015001025) #32 arl13a (ENSNFUG00015001032) XKRX (ENSNFUG00015001040) nox1 (ENSNFUG00015001064) CSTF2 (ENSNFUG00015001129) CU459160.2 (ENSNFUG00015001137) mid1ip1l (ENSNFUG00015001146) TSPAN7 (ENSNFUG00015001151) Cyprinodontoidei ANCESTRAL SPECIES 23 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.b ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Poeciliinae ANCESTRAL SPECIES 11 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481.n #28 ENSGT00940000160787 #30 ENSGT01070000254908 ENSGT00940000157481.m #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 Poecilia ANCESTRAL SPECIES 33 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481.n #28 ENSGT00940000157481.m #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b.g #36 ENSGT00730000112008 ENSGT00940000158026 #37 NAME_6 ANCESTRAL SPECIES 41 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481.n #28 ENSGT00940000157481.m.b #28 ENSGT00940000165950.b ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b.h #36 ENSGT00950000183003.a.a.a.b.g #36 ENSGT00730000112008 ENSGT00940000158026 #37 Amazon molly MODERN SPECIES 494 CSTF2T (ENSPFOG00000016756) ENSPFOG00000016789 mid1ip1l (ENSPFOG00000020880) tspan7 (ENSPFOG00000016802) SRPX2 (ENSPFOG00000016842) sytl4 (ENSPFOG00000016875) trmt12 (ENSPFOG00000016931) zdhhc9 (ENSPFOG00000016952) SASH3 (ENSPFOG00000016989) xpnpep2 (ENSPFOG00000017029) ENSPFOG00000022482 ocrl (ENSPFOG00000017105) ENSPFOG00000017167 clic2 (ENSPFOG00000017189) urp1 (ENSPFOG00000017210) c1galt1c1 (ENSPFOG00000020881) #22 mcts1 (ENSPFOG00000017218) #23 cul4b (ENSPFOG00000017232) #24 lamp2 (ENSPFOG00000017332) #25 ATP1B4 (ENSPFOG00000017367) #26 TMEM255A (ENSPFOG00000017393) #27 zbtb33 (ENSPFOG00000020882) #28 nkap (ENSPFOG00000017413) ndufa1 (ENSPFOG00000017427) #32 upf3b (ENSPFOG00000017429) #34 rpl39 (ENSPFOG00000017441) #35 SOWAHD (ENSPFOG00000017443) #36 ENSPFOG00000017444 septin6 (ENSPFOG00000024721) #37 nkrf (ENSPFOG00000017452) ube2a (ENSPFOG00000017509) Sailfin molly MODERN SPECIES 145 sytl4 (ENSPLAG00000020640) trmt12 (ENSPLAG00000020621) zdhhc9 (ENSPLAG00000020557) SASH3 (ENSPLAG00000020537) xpnpep2 (ENSPLAG00000020484) apln (ENSPLAG00000020437) ENSPLAG00000020432 ocrl (ENSPLAG00000020412) ENSPLAG00000020283 clic2 (ENSPLAG00000020249) urp1 (ENSPLAG00000020231) c1galt1c1 (ENSPLAG00000020199) #22 mcts1 (ENSPLAG00000020181) #23 cul4b (ENSPLAG00000020141) #24 lamp2 (ENSPLAG00000020069) #25 ATP1B4 (ENSPLAG00000020057) #26 TMEM255A (ENSPLAG00000020004) #27 zbtb33 (ENSPLAG00000019980) #28 nkap (ENSPLAG00000000443) ndufa1 (ENSPLAG00000019941) #32 upf3b (ENSPLAG00000019922) #34 rpl39 (ENSPLAG00000019914) #35 SOWAHD (ENSPLAG00000019901) #36 ENSPLAG00000019885 septin6 (ENSPLAG00000019878) #37 nkrf (ENSPLAG00000019829) ube2a (ENSPLAG00000019821) Guppy MODERN SPECIES 440 nox1 (ENSPREG00000011456) cstf2 (ENSPREG00000011481) ENSPREG00000011500 tspan7 (ENSPREG00000011560) SRPX2 (ENSPREG00000011583) ENSPREG00000011601 trmt12 (ENSPREG00000011621) zdhhc9 (ENSPREG00000011667) SASH3 (ENSPREG00000011701) xpnpep2 (ENSPREG00000011720) apln (ENSPREG00000011756) ocrl (ENSPREG00000011774) ENSPREG00000011885 clic2 (ENSPREG00000011905) urp1 (ENSPREG00000011927) c1galt1c1 (ENSPREG00000011966) #22 mcts1 (ENSPREG00000011974) #23 cul4b (ENSPREG00000011997) #24 lamp2 (ENSPREG00000012067) #25 ATP1B4 (ENSPREG00000012114) #26 TMEM255A (ENSPREG00000012134) #27 zbtb33 (ENSPREG00000012167) #28 nkap (ENSPREG00000012180) ndufa1 (ENSPREG00000012201) #32 upf3b (ENSPREG00000012214) #34 ENSPREG00000012232 rpl39 (ENSPREG00000012246) #35 SOWAHD (ENSPREG00000012278) #36 ENSPREG00000012300 septin6 (ENSPREG00000012310) #37 nkrf (ENSPREG00000012340) Platyfish MODERN SPECIES 15 ENSXMAG00000013531 ENSXMAG00000029843 tspan7 (ENSXMAG00000013532) SRPX2 (ENSXMAG00000013538) sytl4 (ENSXMAG00000013546) trmt12 (ENSXMAG00000025318) zdhhc9 (ENSXMAG00000013554) SASH3 (ENSXMAG00000013558) xpnpep2 (ENSXMAG00000013561) apln (ENSXMAG00000013581) ENSXMAG00000026082 ocrl (ENSXMAG00000013582) ENSXMAG00000013602 clic2 (ENSXMAG00000023462) urp1 (ENSXMAG00000025258) c1galt1c1 (ENSXMAG00000019525) #22 mcts1 (ENSXMAG00000023339) #23 cul4b (ENSXMAG00000013613) #24 lamp2 (ENSXMAG00000013631) #25 ATP1B4 (ENSXMAG00000025506) #26 TMEM255A (ENSXMAG00000024853) #27 zbtb33 (ENSXMAG00000013673) #28 NKAP (ENSXMAG00000013674) #30 ENSXMAG00000025558 upf3b (ENSXMAG00000013680) #34 rpl39 (ENSXMAG00000013690) #35 SOWAHD (ENSXMAG00000013692) #36 ENSXMAG00000013696 septin6 (ENSXMAG00000013699) #37 nkrf (ENSXMAG00000013716) ube2a (ENSXMAG00000013717) NAME_4 ANCESTRAL SPECIES 23 ENSGT00940000175481 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Mummichog MODERN SPECIES 2190 cstf2 (ENSFHEG00000017065) ENSFHEG00000017082 ENSFHEG00000017089 ENSFHEG00000017190 SRPX2 (ENSFHEG00000017213) sytl4 (ENSFHEG00000017322) trmt12 (ENSFHEG00000017338) zdhhc9 (ENSFHEG00000017350) SASH3 (ENSFHEG00000017371) xpnpep2 (ENSFHEG00000017384) apln (ENSFHEG00000017399) ocrl (ENSFHEG00000017566) ENSFHEG00000017585 clic2 (ENSFHEG00000017611) urp1 (ENSFHEG00000017622) c1galt1c1 (ENSFHEG00000017648) #22 mcts1 (ENSFHEG00000017670) #23 cul4b (ENSFHEG00000017732) #24 lamp2 (ENSFHEG00000017758) #25 ATP1B4 (ENSFHEG00000017787) #26 TMEM255A (ENSFHEG00000017868) #27 zbtb33 (ENSFHEG00000017873) #28 nkap (ENSFHEG00000017887) ndufa1 (ENSFHEG00000017880) #32 upf3b (ENSFHEG00000017895) #34 rpl39 (ENSFHEG00000017908) ##35 SOWAHD (ENSFHEG00000000466) #36 ENSFHEG00000017922 septin6 (ENSFHEG00000017987) #37 nkrf (ENSFHEG00000017996) ube2a (ENSFHEG00000018038) Sheepshead minnow MODERN SPECIES 131 ENSCVAG00000005712 ENSCVAG00000005674 tspan7 (ENSCVAG00000005643) SRPX2 (ENSCVAG00000005630) sytl4 (ENSCVAG00000005620) trmt12 (ENSCVAG00000005590) zdhhc9 (ENSCVAG00000005584) SASH3 (ENSCVAG00000005564) xpnpep2 (ENSCVAG00000005550) ENSCVAG00000005533 ENSCVAG00000005522 ocrl (ENSCVAG00000005512) ENSCVAG00000005305 clic2 (ENSCVAG00000005275) urp1 (ENSCVAG00000005249) c1galt1c1 (ENSCVAG00000005243) #22 mcts1 (ENSCVAG00000005236) #23 cul4b (ENSCVAG00000005209) #24 lamp2 (ENSCVAG00000005125) #25 ATP1B4 (ENSCVAG00000005108) #26 TMEM255A (ENSCVAG00000005091) #27 zbtb33 (ENSCVAG00000005065) #28 nkap (ENSCVAG00000005054) ndufa1 (ENSCVAG00000005045) #32 upf3b (ENSCVAG00000005030) #34 rpl39 (ENSCVAG00000004990) #35 SOWAHD (ENSCVAG00000004983) #36 ENSCVAG00000004970 septin6 (ENSCVAG00000004959) #37 nkrf (ENSCVAG00000004926) ube2a (ENSCVAG00000004921) Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Pomacentridae ANCESTRAL SPECIES 4 ENSGT00940000158987 ENSGT00940000153737.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Pomacentridae_A ANCESTRAL SPECIES 20 ENSGT00940000158987 ENSGT00940000153737.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Amphiprion ANCESTRAL SPECIES 17 ENSGT00940000158987 ENSGT00940000153737.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Orange clownfish MODERN SPECIES 4 cstf2 (ENSAPEG00000006526) ENSAPEG00000006504 tspan7 (ENSAPEG00000006421) SRPX2 (ENSAPEG00000006398) sytl4 (ENSAPEG00000006387) trmt12 (ENSAPEG00000006335) zdhhc9 (ENSAPEG00000006303) SASH3 (ENSAPEG00000006262) xpnpep2 (ENSAPEG00000006123) apln (ENSAPEG00000006097) ENSAPEG00000006045 ocrl (ENSAPEG00000006006) ENSAPEG00000005987 clic2 (ENSAPEG00000005928) urp1 (ENSAPEG00000005911) c1galt1c1 (ENSAPEG00000005893) #22 mcts1 (ENSAPEG00000005866) #23 cul4b (ENSAPEG00000005798) #24 lamp2 (ENSAPEG00000005766) #25 ATP1B4 (ENSAPEG00000005743) #26 TMEM255A (ENSAPEG00000005681) #27 zbtb33 (ENSAPEG00000005666) #28 ndufa1 (ENSAPEG00000005631) #32 nkap (ENSAPEG00000005595) upf3b (ENSAPEG00000005545) #34 rpl39 (ENSAPEG00000005525) #35 SOWAHD (ENSAPEG00000005520) #36 ENSAPEG00000005508 septin6 (ENSAPEG00000005460) #37 nkrf (ENSAPEG00000005444) ube2a (ENSAPEG00000005403) Clown anemonefish MODERN SPECIES 1039 c1galt1c1 (ENSAOCG00000010933) #22 mcts1 (ENSAOCG00000000691) #23 cul4b (ENSAOCG00000011022) #24 lamp2 (ENSAOCG00000011037) #25 ATP1B4 (ENSAOCG00000011049) #26 TMEM255A (ENSAOCG00000011066) #27 zbtb33 (ENSAOCG00000011070) #28 nkap (ENSAOCG00000011084) ndufa1 (ENSAOCG00000011102) #32 upf3b (ENSAOCG00000000706) #34 rpl39 (ENSAOCG00000011218) #35 SOWAHD (ENSAOCG00000011221) #36 ENSAOCG00000011241 septin6 (ENSAOCG00000011293) #37 nkrf (ENSAOCG00000011327) ube2a (ENSAOCG00000011379) Spiny chromis MODERN SPECIES 35 cks2 (ENSAPOG00000011857) odf3l2b (ENSAPOG00000011908) tspan7 (ENSAPOG00000011926) SRPX2 (ENSAPOG00000011949) sytl4 (ENSAPOG00000011966) trmt12 (ENSAPOG00000011979) zdhhc9 (ENSAPOG00000012014) SASH3 (ENSAPOG00000012030) xpnpep2 (ENSAPOG00000012072) apln (ENSAPOG00000012099) ENSAPOG00000012134 ocrl (ENSAPOG00000012272) ENSAPOG00000012320 urp1 (ENSAPOG00000012356) clic2 (ENSAPOG00000012395) c1galt1c1 (ENSAPOG00000012420) #22 mcts1 (ENSAPOG00000012469) #23 cul4b (ENSAPOG00000012597) #24 lamp2 (ENSAPOG00000012640) #25 ATP1B4 (ENSAPOG00000012659) #26 TMEM255A (ENSAPOG00000012722) #27 zbtb33 (ENSAPOG00000012733) #28 nkap (ENSAPOG00000012760) ndufa1 (ENSAPOG00000012742) #32 upf3b (ENSAPOG00000012775) #34 rpl39 (ENSAPOG00000012798) #35 SOWAHD (ENSAPOG00000012825) #36 ENSAPOG00000012844 septin6 (ENSAPOG00000000347) #37 nkrf (ENSAPOG00000012969) ube2a (ENSAPOG00000012959) Bicolor damselfish MODERN SPECIES 238 ENSSPAG00000009268 ENSSPAG00000009303 tspan7 (ENSSPAG00000009363) SRPX2 (ENSSPAG00000009393) sytl4 (ENSSPAG00000009410) trmt12 (ENSSPAG00000009435) zdhhc9 (ENSSPAG00000009454) SASH3 (ENSSPAG00000009491) xpnpep2 (ENSSPAG00000009506) apln (ENSSPAG00000009538) ENSSPAG00000009546 ocrl (ENSSPAG00000009581) ENSSPAG00000009709 clic2 (ENSSPAG00000009738) urp1 (ENSSPAG00000009762) c1galt1c1 (ENSSPAG00000009774) #22 mcts1 (ENSSPAG00000009797) #23 cul4b (ENSSPAG00000009826) #24 lamp2 (ENSSPAG00000009881) #25 ATP1B4 (ENSSPAG00000009915) #26 TMEM255A (ENSSPAG00000009932) #27 zbtb33 (ENSSPAG00000009947) #28 nkap (ENSSPAG00000009953) ndufa1 (ENSSPAG00000009968) #32 upf3b (ENSSPAG00000009989) #34 rpl39 (ENSSPAG00000010028) ##35 SOWAHD (ENSSPAG00000010083) #36 ENSSPAG00000010090 septin6 (ENSSPAG00000010108) #37 nkrf (ENSSPAG00000010145) ube2a (ENSSPAG00000010156) Cichlidae ANCESTRAL SPECIES 8 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 17 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 24 ENSGT00940000153737.a ENSGT00940000175481 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Haplochromini ANCESTRAL SPECIES 14 ENSGT00940000153737.a ENSGT00940000175481 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Burton s mouthbrooder MODERN SPECIES 273 ENSHBUG00000016265 ENSHBUG00000016337 tspan7 (ENSHBUG00000016351) SRPX2 (ENSHBUG00000016371) sytl4 (ENSHBUG00000016396) trmt12 (ENSHBUG00000016412) zdhhc9 (ENSHBUG00000016462) SASH3 (ENSHBUG00000016484) xpnpep2 (ENSHBUG00000016524) apln (ENSHBUG00000016548) ENSHBUG00000016583 ocrl (ENSHBUG00000016975) ENSHBUG00000017042 clic2 (ENSHBUG00000017065) urp1 (ENSHBUG00000017075) c1galt1c1 (ENSHBUG00000017092) #22 mcts1 (ENSHBUG00000017135) #23 cul4b (ENSHBUG00000017265) #24 lamp2 (ENSHBUG00000017285) #25 ATP1B4 (ENSHBUG00000017309) #26 TMEM255A (ENSHBUG00000017322) #27 zbtb33 (ENSHBUG00000017331) #28 nkap (ENSHBUG00000017358) ndufa1 (ENSHBUG00000017376) #32 upf3b (ENSHBUG00000017393) #34 rpl39 (ENSHBUG00000017410) #35 SOWAHD (ENSHBUG00000017429) #36 ENSHBUG00000017440 septin6 (ENSHBUG00000017506) #37 nkrf (ENSHBUG00000017543) ube2a (ENSHBUG00000017534) Haplochromini_A ANCESTRAL SPECIES 13 ENSGT00940000153737.a ENSGT00940000175481 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Haplochromini_B ANCESTRAL SPECIES 7 ENSGT00940000153737.a ENSGT00940000175481 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Zebra mbuna MODERN SPECIES 1102 ENSMZEG00005007253 ENSMZEG00005007279 tspan7 (ENSMZEG00005007299) SRPX2 (ENSMZEG00005007311) sytl4 (ENSMZEG00005007326) trmt12 (ENSMZEG00005007349) zdhhc9 (ENSMZEG00005007364) SASH3 (ENSMZEG00005007395) xpnpep2 (ENSMZEG00005007420) apln (ENSMZEG00005007435) ENSMZEG00005007445 ocrl (ENSMZEG00005007494) ENSMZEG00005007671 clic2 (ENSMZEG00005007700) urp1 (ENSMZEG00005007719) c1galt1c1 (ENSMZEG00005007726) #22 mcts1 (ENSMZEG00005007740) #23 cul4b (ENSMZEG00005007768) #24 lamp2 (ENSMZEG00005007791) #25 ATP1B4 (ENSMZEG00005007815) #26 TMEM255A (ENSMZEG00005007829) #27 zbtb33 (ENSMZEG00005007841) #28 nkap (ENSMZEG00005007845) ndufa1 (ENSMZEG00005007866) #32 upf3b (ENSMZEG00005007871) #34 rpl39 (ENSMZEG00005007879) #35 SOWAHD (ENSMZEG00005007907) #36 ENSMZEG00005007919 septin6 (ENSMZEG00005007935) #37 nkrf (ENSMZEG00005007953) ube2a (ENSMZEG00005007959) Eastern happy MODERN SPECIES 11 ENSACLG00000000920 tspan7 (ENSACLG00000000955) ENSACLG00000000975 SRPX2 (ENSACLG00000000980) sytl4 (ENSACLG00000000994) trmt12 (ENSACLG00000001008) zdhhc9 (ENSACLG00000001014) SASH3 (ENSACLG00000001063) xpnpep2 (ENSACLG00000001072) apln (ENSACLG00000001128) ENSACLG00000001145 ocrl (ENSACLG00000001194) ENSACLG00000001240 clic2 (ENSACLG00000001301) urp1 (ENSACLG00000001340) c1galt1c1 (ENSACLG00000001347) #22 mcts1 (ENSACLG00000001364) #23 cul4b (ENSACLG00000001391) #24 lamp2 (ENSACLG00000001446) #25 ATP1B4 (ENSACLG00000001478) #26 TMEM255A (ENSACLG00000001496) #27 zbtb33 (ENSACLG00000001512) #28 nkap (ENSACLG00000001534) ndufa1 (ENSACLG00000001562) #32 upf3b (ENSACLG00000001649) #34 rpl39 (ENSACLG00000001657) #35 SOWAHD (ENSACLG00000001699) #36 ENSACLG00000001719 septin6 (ENSACLG00000001734) #37 nkrf (ENSACLG00000001752) ube2a (ENSACLG00000001757) P. nyererei MODERN SPECIES 303 ENSPNYG00000010771 tspan7 (ENSPNYG00000010762) SRPX2 (ENSPNYG00000010750) ENSPNYG00000010731 ENSPNYG00000010719 trmt12 (ENSPNYG00000010696) zdhhc9 (ENSPNYG00000010672) SASH3 (ENSPNYG00000010628) xpnpep2 (ENSPNYG00000010569) apln (ENSPNYG00000010548) ENSPNYG00000010520 ocrl (ENSPNYG00000010286) ENSPNYG00000010191 clic2 (ENSPNYG00000010160) urp1 (ENSPNYG00000010133) c1galt1c1 (ENSPNYG00000010120) #22 mcts1 (ENSPNYG00000010081) #23 cul4b (ENSPNYG00000010010) #24 lamp2 (ENSPNYG00000009977) #25 ATP1B4 (ENSPNYG00000009925) #26 TMEM255A (ENSPNYG00000009911) #27 zbtb33 (ENSPNYG00000009901) #28 nkap (ENSPNYG00000009885) ndufa1 (ENSPNYG00000009863) #32 upf3b (ENSPNYG00000009846) #34 rpl39 (ENSPNYG00000009831) ##35 SOWAHD (ENSPNYG00000009802) #36 ENSPNYG00000009748 septin6 (ENSPNYG00000009709) #37 ube2a (ENSPNYG00000009667) nkrf (ENSPNYG00000009655) Lyretail cichlid MODERN SPECIES 389 clic2 (ENSNBRG00000011257) urp1 (ENSNBRG00000011277) c1galt1c1 (ENSNBRG00000011299) #22 ENSNBRG00000011313 cul4b (ENSNBRG00000011336) #24 lamp2 (ENSNBRG00000011397) #25 ATP1B4 (ENSNBRG00000011432) #26 TMEM255A (ENSNBRG00000011461) #27 zbtb33 (ENSNBRG00000011496) #28 ENSNBRG00000011506 ndufa1 (ENSNBRG00000011527) #32 upf3b (ENSNBRG00000011560) #34 rpl39 (ENSNBRG00000011616) #35 SOWAHD (ENSNBRG00000011626) #36 ENSNBRG00000011648 septin6 (ENSNBRG00000011675) #37 nkrf (ENSNBRG00000011707) ENSNBRG00000011735 Nile tilapia MODERN SPECIES 11 ENSONIG00000002629 mid1ip1l (ENSONIG00000034082) tspan7 (ENSONIG00000002624) srpx2 (ENSONIG00000040165) sytl4 (ENSONIG00000002616) trmt12 (ENSONIG00000002614) zdhhc9 (ENSONIG00000002607) SASH3 (ENSONIG00000002604) xpnpep2 (ENSONIG00000002596) ENSONIG00000029367 ENSONIG00000002594 ocrl (ENSONIG00000002581) ENSONIG00000002580 clic2 (ENSONIG00000002575) urp1 (ENSONIG00000002571) c1galt1c1 (ENSONIG00000020860) #22 mcts1 (ENSONIG00000002566) #23 cul4b (ENSONIG00000040788) #24 lamp2 (ENSONIG00000002558) #25 ATP1B4 (ENSONIG00000002552) #26 TMEM255A (ENSONIG00000039088) #27 zbtb33 (ENSONIG00000002549) #28 nkap (ENSONIG00000002546) ndufa1 (ENSONIG00000002542) #32 upf3b (ENSONIG00000002536) #34 rpl39 (ENSONIG00000042968) #35 SOWAHD (ENSONIG00000020859) #36 ENSONIG00000002534 septin6 (ENSONIG00000002528) #37 nkrf (ENSONIG00000002526) ube2a (ENSONIG00000014319) Midas cichlid MODERN SPECIES 396 ENSACIG00000012876 ENSACIG00000012883 tspan7 (ENSACIG00000012906) SRPX2 (ENSACIG00000012930) ENSACIG00000012956 ENSACIG00000012970 trmt12 (ENSACIG00000012982) zdhhc9 (ENSACIG00000013003) SASH3 (ENSACIG00000013023) xpnpep2 (ENSACIG00000013093) ENSACIG00000013137 ocrl (ENSACIG00000013165) ENSACIG00000013212 clic2 (ENSACIG00000013237) urp1 (ENSACIG00000013252) c1galt1c1 (ENSACIG00000013266) #22 mcts1 (ENSACIG00000013270) #23 cul4b (ENSACIG00000013312) #24 lamp2 (ENSACIG00000013368) #25 ATP1B4 (ENSACIG00000013445) #26 TMEM255A (ENSACIG00000013493) #27 zbtb33 (ENSACIG00000013515) #28 nkap (ENSACIG00000013538) ndufa1 (ENSACIG00000013569) #32 upf3b (ENSACIG00000013582) #34 rpl39 (ENSACIG00000013617) #35 SOWAHD (ENSACIG00000013659) #36 ENSACIG00000013664 septin6 (ENSACIG00000013682) #37 nkrf (ENSACIG00000013701) ube2a (ENSACIG00000013725) Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00940000164536.b ENSGT00950000184267 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00940000181367 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 Eupercaria ANCESTRAL SPECIES 12 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00940000181367 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Tetraodontidae ANCESTRAL SPECIES 9 ENSGT00940000153902.b.b ENSGT00940000154103.b ENSGT01030000234566.e.b.b.b #9 ENSGT00940000155920 #10 ENSGT01050000244888.b.a.c.a ENSGT00530000063666.a ENSGT00940000164237.f ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000014020 ENSGT00940000157996 ENSGT00950000183053.B ENSGT00940000155621 ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 Tetraodon MODERN SPECIES ENSTNIG00000015783 msnb (ENSTNIG00000015782) zc4h2 (ENSTNIG00000015781) asb12b (ENSTNIG00000000074) arhgef9b (ENSTNIG00000015780) TENM1 (ENSTNIG00000015779) #9 ENSTNIG00000015778 #10 agtr2 (ENSTNIG00000015777) ENSTNIG00000015776 ENSTNIG00000015775 rps6kal (ENSTNIG00000015774) POU3F4 (ENSTNIG00000015773) ocrl (ENSTNIG00000015772) ENSTNIG00000000701 clic2 (ENSTNIG00000015771) c1galt1c1 (ENSTNIG00000000243) #22 mcts1 (ENSTNIG00000000134) #23 cul4b (ENSTNIG00000015770) #24 ENSTNIG00000015769 #25 ATP1B4 (ENSTNIG00000015768) #26 TMEM255A (ENSTNIG00000015767) #27 zbtb33 (ENSTNIG00000015766) #28 nkap (ENSTNIG00000015765) ndufa1 (ENSTNIG00000015764) #32 upf3b (ENSTNIG00000015763) #34 rpl39 (ENSTNIG00000000663) ##35 ENSTNIG00000015762 septin6 (ENSTNIG00000015761) #37 nkrf (ENSTNIG00000015760) ube2a (ENSTNIG00000015759) elf1 (ENSTNIG00000015758) Fugu MODERN SPECIES 5 asb12b (ENSTRUG00000006010) arhgef9b (ENSTRUG00000006157) ENSTRUG00000019751 TENM1 (ENSTRUG00000006641) #9 ENSTRUG00000007266 #10 agtr2 (ENSTRUG00000007325) APOOL (ENSTRUG00000007376) ENSTRUG00000029265 rps6kal (ENSTRUG00000008234) POU3F4 (ENSTRUG00000008957) apln (ENSTRUG00000021840) ocrl (ENSTRUG00000008986) ENSTRUG00000009398 clic2 (ENSTRUG00000009475) urp1 (ENSTRUG00000024529) c1galt1c1 (ENSTRUG00000009661) #22 mcts1 (ENSTRUG00000009679) #23 cul4b (ENSTRUG00000009785) #24 lamp2 (ENSTRUG00000010145) #25 ATP1B4 (ENSTRUG00000010323) #26 TMEM255A (ENSTRUG00000010438) #27 zbtb33 (ENSTRUG00000010561) #28 nkap (ENSTRUG00000010589) ndufa1 (ENSTRUG00000010642) #32 upf3b (ENSTRUG00000010645) #34 rpl39 (ENSTRUG00000010829) #35 SOWAHD (ENSTRUG00000020951) #36 ENSTRUG00000023174 septin6 (ENSTRUG00000010830) #37 nkrf (ENSTRUG00000023782) ube2a (ENSTRUG00000027310) Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00940000181367 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Ballan wrasse MODERN SPECIES 237 cstf2 (ENSLBEG00000028720) ENSLBEG00000028719 tspan7 (ENSLBEG00000028716) SRPX2 (ENSLBEG00000028715) sytl4 (ENSLBEG00000028714) trmt12 (ENSLBEG00000028712) zdhhc9 (ENSLBEG00000028711) SASH3 (ENSLBEG00000028709) xpnpep2 (ENSLBEG00000028708) apln (ENSLBEG00000028707) ENSLBEG00000028706 ocrl (ENSLBEG00000028705) ENSLBEG00000028703 clic2 (ENSLBEG00000028702) urp1 (ENSLBEG00000028701) c1galt1c1 (ENSLBEG00000028700) #22 mcts1 (ENSLBEG00000028699) #23 cul4b (ENSLBEG00000028698) #24 lamp2 (ENSLBEG00000028696) #25 ATP1B4 (ENSLBEG00000028695) #26 TMEM255A (ENSLBEG00000028694) #27 zbtb33 (ENSLBEG00000028693) #28 ndufa1 (ENSLBEG00000028692) #32 nkap (ENSLBEG00000028690) upf3b (ENSLBEG00000028689) #34 rpl39 (ENSLBEG00000028687) ##35 SOWAHD (ENSLBEG00000028685) #36 ENSLBEG00000028684 septin6 (ENSLBEG00000028683) #37 nkrf (ENSLBEG00000028681) ube2a (ENSLBEG00000028680) Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00940000181367 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Perciformes ANCESTRAL SPECIES 13 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00940000181367 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Perciformes_a ANCESTRAL SPECIES 11 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00950000184267 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000181367 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 Channel bull blenny MODERN SPECIES 1 cstf2 (ENSCGOG00000018720) ENSCGOG00000018715 mid1ip1l (ENSCGOG00000018711) tspan7 (ENSCGOG00000018672) SRPX2 (ENSCGOG00000018631) ENSCGOG00000018628 trmt12 (ENSCGOG00000018627) zdhhc9 (ENSCGOG00000018625) SASH3 (ENSCGOG00000018620) xpnpep2 (ENSCGOG00000018449) ENSCGOG00000018438 ocrl (ENSCGOG00000018221) ENSCGOG00000018211 clic2 (ENSCGOG00000018209) urp1 (ENSCGOG00000018208) c1galt1c1 (ENSCGOG00000018206) #22 mcts1 (ENSCGOG00000018174) #23 cul4b (ENSCGOG00000016520) #24 lamp2 (ENSCGOG00000016448) #25 ATP1B4 (ENSCGOG00000016447) #26 TMEM255A (ENSCGOG00000016446) #27 zbtb33 (ENSCGOG00000016444) #28 ENSCGOG00000016443 nkap (ENSCGOG00000016440) ndufa1 (ENSCGOG00000016436) #32 upf3b (ENSCGOG00000016423) #34 rpl39 (ENSCGOG00000016418) #35 SOWAHD (ENSCGOG00000016416) #36 ENSCGOG00000016411 septin6 (ENSCGOG00000014875) #37 nkrf (ENSCGOG00000014847) Pike perch MODERN SPECIES 18 cstf2 (ENSSLUG00000022806) mid1ip1l (ENSSLUG00000022801) tspan7 (ENSSLUG00000022797) SRPX2 (ENSSLUG00000022719) ENSSLUG00000022706 trmt12 (ENSSLUG00000022697) zdhhc9 (ENSSLUG00000022693) SASH3 (ENSSLUG00000022682) xpnpep2 (ENSSLUG00000022650) ENSSLUG00000022630 ENSSLUG00000022627 ocrl (ENSSLUG00000022066) ENSSLUG00000021996 clic2 (ENSSLUG00000021986) urp1 (ENSSLUG00000021984) c1galt1c1 (ENSSLUG00000021980) #22 mcts1 (ENSSLUG00000021974) #23 cul4b (ENSSLUG00000021636) #24 lamp2 (ENSSLUG00000021601) #25 ATP1B4 (ENSSLUG00000021589) #26 TMEM255A (ENSSLUG00000021576) #27 zbtb33 (ENSSLUG00000021572) #28 nkap (ENSSLUG00000021562) ndufa1 (ENSSLUG00000021560) #32 upf3b (ENSSLUG00000021550) #34 rpl39 (ENSSLUG00000021540) ##35 SOWAHD (ENSSLUG00000021539) #36 ENSSLUG00000021538 septin6 (ENSSLUG00000020817) #37 nkrf (ENSSLUG00000020777) ube2a (ENSSLUG00000020757) Cottioidei ANCESTRAL SPECIES 9 ENSGT00940000153737.b.h ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00950000184267 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000163102 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 Stickleback MODERN SPECIES 3 xkrx (ENSGACG00000017320) nox1 (ENSGACG00000017324) cstf2 (ENSGACG00000017326) ENSGACG00000017330 mid1ip1l (ENSGACG00000017332) tspan7 (ENSGACG00000017334) SRPX2 (ENSGACG00000017346) sytl4 (ENSGACG00000017349) trmt12 (ENSGACG00000017351) zdhhc9 (ENSGACG00000017353) SASH3 (ENSGACG00000017357) xpnpep2 (ENSGACG00000017362) ocrl (ENSGACG00000017367) ENSGACG00000017372 clic2 (ENSGACG00000017379) c1galt1c1 (ENSGACG00000017410) #22 cul4b (ENSGACG00000017411) #24 lamp2 (ENSGACG00000017415) #25 ATP1B4 (ENSGACG00000017418) #26 TMEM255A (ENSGACG00000017424) #27 zbtb33 (ENSGACG00000017428) #28 nkap (ENSGACG00000017430) ndufa1 (ENSGACG00000017434) #32 upf3b (ENSGACG00000017435) #34 rpl39 (ENSGACG00000017440) #35 septin6 (ENSGACG00000017441) #37 nkrf (ENSGACG00000017457) ube2a (ENSGACG00000017461) elf1 (ENSGACG00000017463) tnmd (ENSGACG00000017466) pcdh19 (ENSGACG00000017467) Lumpfish MODERN SPECIES 1 ENSCLMG00005003519 ENSCLMG00005003521 mid1ip1l (ENSCLMG00005003522) tspan7 (ENSCLMG00005003525) SRPX2 (ENSCLMG00005003529) sytl4 (ENSCLMG00005003535) trmt12 (ENSCLMG00005003540) zdhhc9 (ENSCLMG00005003541) SASH3 (ENSCLMG00005003542) xpnpep2 (ENSCLMG00005003548) ENSCLMG00005003577 ocrl (ENSCLMG00005003590) ENSCLMG00005005227 clic2 (ENSCLMG00005005261) urp1 (ENSCLMG00005005262) c1galt1c1 (ENSCLMG00005005263) #22 mcts1 (ENSCLMG00005005264) #23 cul4b (ENSCLMG00005005266) #24 lamp2 (ENSCLMG00005005278) #25 ATP1B4 (ENSCLMG00005005281) #26 TMEM255A (ENSCLMG00005005285) #27 zbtb33 (ENSCLMG00005005287) #28 nkap (ENSCLMG00005005289) ENSCLMG00005005290 upf3b (ENSCLMG00005005293) #34 rpl39 (ENSCLMG00005005294) #35 SOWAHD (ENSCLMG00005005296) #36 ENSCLMG00005005298 septin6 (ENSCLMG00005005320) #37 nkrf (ENSCLMG00005008394) ube2a (ENSCLMG00005008395) Eupecaria_C ANCESTRAL SPECIES 12 ENSGT00940000158987 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 14 ENSGT00940000158987 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b European seabass MODERN SPECIES 12 ENSDLAG00005007796 ENSDLAG00005030604 mid1ip1l (ENSDLAG00005034884) tspan7 (ENSDLAG00005007775) ENSDLAG00005007740 SYTL4 (ENSDLAG00005007634) zdhhc9 (ENSDLAG00005035140) SASH3 (ENSDLAG00005007598) xpnpep2 (ENSDLAG00005007392) ENSDLAG00005007371 ENSDLAG00005027231 ocrl (ENSDLAG00005005238) ENSDLAG00005005120 clic2 (ENSDLAG00005005108) urp1 (ENSDLAG00005005100) C1GALT1C1 (ENSDLAG00005028234) #22 mcts1 (ENSDLAG00005026448) #23 CUL4B (ENSDLAG00005004484) #24 lamp2 (ENSDLAG00005004423) #25 ATP1B4 (ENSDLAG00005030349) #26 TMEM255A (ENSDLAG00005004336) #27 zbtb33 (ENSDLAG00005004326) #28 nkap (ENSDLAG00005030368) ndufa1 (ENSDLAG00005034436) #32 upf3b (ENSDLAG00005015949) #34 rpl39 (ENSDLAG00005015939) #35 SOWAHD (ENSDLAG00005027001) #36 septin6 (ENSDLAG00005014606) #37 NKRF (ENSDLAG00005014567) UBE2A (ENSDLAG00005014521) elf1 (ENSDLAG00005014494) Large yellow croaker MODERN SPECIES cstf2 (ENSLCRG00005004445) ENSLCRG00005004433 mid1ip1l (ENSLCRG00005004424) tspan7 (ENSLCRG00005004419) SRPX2 (ENSLCRG00005004412) sytl4 (ENSLCRG00005004408) trmt12 (ENSLCRG00005004404) zdhhc9 (ENSLCRG00005004402) SASH3 (ENSLCRG00005004401) xpnpep2 (ENSLCRG00005004362) apln (ENSLCRG00005004345) ocrl (ENSLCRG00005001713) ENSLCRG00005001471 clic2 (ENSLCRG00005001455) urp1 (ENSLCRG00005017959) c1galt1c1 (ENSLCRG00005017958) #22 mcts1 (ENSLCRG00005017956) #23 cul4b (ENSLCRG00005017879) #24 lamp2 (ENSLCRG00005017868) #25 ATP1B4 (ENSLCRG00005017865) #26 TMEM255A (ENSLCRG00005017862) #27 zbtb33 (ENSLCRG00005017861) #28 nkap (ENSLCRG00005017860) ndufa1 (ENSLCRG00005017857) #32 upf3b (ENSLCRG00005017847) #34 rpl39 (ENSLCRG00005017845) #35 SOWAHD (ENSLCRG00005017844) #36 ENSLCRG00005017843 septin6 (ENSLCRG00005016310) #37 nkrf (ENSLCRG00005016292) ube2a (ENSLCRG00005016290) Gilthead seabream MODERN SPECIES 9 cstf2 (ENSSAUG00010014095) ENSSAUG00010014100 mid1ip1l (ENSSAUG00010014106) tspan7 (ENSSAUG00010014108) SRPX2 (ENSSAUG00010014113) sytl4 (ENSSAUG00010014118) trmt12 (ENSSAUG00010014124) zdhhc9 (ENSSAUG00010014125) SASH3 (ENSSAUG00010014129) xpnpep2 (ENSSAUG00010014147) ENSSAUG00010014265 ocrl (ENSSAUG00010014282) ENSSAUG00010015432 clic2 (ENSSAUG00010015433) urp1 (ENSSAUG00010015491) c1galt1c1 (ENSSAUG00010015492) #22 mcts1 (ENSSAUG00010015494) #23 cul4b (ENSSAUG00010015552) #24 lamp2 (ENSSAUG00010018210) #25 ATP1B4 (ENSSAUG00010018212) #26 ENSSAUG00010018214 TMEM255A (ENSSAUG00010018217) #27 nkap (ENSSAUG00010018218) NDUFA1 (ENSSAUG00010018219) #32 upf3b (ENSSAUG00010018225) #34 rpl39 (ENSSAUG00010018227) #35 SOWAHD (ENSSAUG00010018229) #36 nkrf (ENSSAUG00010018237) ube2a (ENSSAUG00010019301) elf1 (ENSSAUG00010019307) tnmd (ENSSAUG00010019310) Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00950000184267 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00940000181367 ENSGT00940000163102 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 Carangaria ANCESTRAL SPECIES 15 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00950000184267 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00940000181367 ENSGT00940000163102 ENSGT00940000160787 #30 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 Carangaria_A ANCESTRAL SPECIES 17 ENSGT00940000161661 ENSGT00940000153737.a ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.a.b.a.a ##35 ENSGT01060000249567 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 Barramundi perch MODERN SPECIES 483 SASH3 (ENSLCAG00010025483) xpnpep2 (ENSLCAG00010025470) ENSLCAG00010025455 ocrl (ENSLCAG00010025406) ENSLCAG00010025364 clic2 (ENSLCAG00010025352) urp1 (ENSLCAG00010025346) c1galt1c1 (ENSLCAG00010025343) #22 mcts1 (ENSLCAG00010025335) #23 cul4b (ENSLCAG00010025214) #24 lamp2 (ENSLCAG00010025114) #25 ATP1B4 (ENSLCAG00010025110) #26 TMEM255A (ENSLCAG00010025103) #27 zbtb33 (ENSLCAG00010025099) #28 nkap (ENSLCAG00010025094) ndufa1 (ENSLCAG00010025089) #32 upf3b (ENSLCAG00010025083) #34 rpl39 (ENSLCAG00010025073) #35 ENSLCAG00010025069 #36 ENSLCAG00010025065 septin6 (ENSLCAG00010025017) #37 Seriola ANCESTRAL SPECIES 31 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Yellowtail amberjack MODERN SPECIES 3289 mtnr1al (ENSSLDG00000024810) SLC36A1 (ENSSLDG00000024977) atox1 (ENSSLDG00000024991) sytl4 (ENSSLDG00000025002) trmt12 (ENSSLDG00000025007) zdhhc9 (ENSSLDG00000025009) SASH3 (ENSSLDG00000025019) xpnpep2 (ENSSLDG00000002557) apln (ENSSLDG00000002578) ENSSLDG00000002603 ocrl (ENSSLDG00000002619) ENSSLDG00000002749 clic2 (ENSSLDG00000002780) urp1 (ENSSLDG00000002821) mcts1 (ENSSLDG00000002831) #23 c1galt1c1 (ENSSLDG00000002863) #22 cul4b (ENSSLDG00000002893) #24 lamp2 (ENSSLDG00000002983) #25 ATP1B4 (ENSSLDG00000003008) #26 TMEM255A (ENSSLDG00000003032) #27 zbtb33 (ENSSLDG00000003046) #28 nkap (ENSSLDG00000003063) ndufa1 (ENSSLDG00000003112) #32 upf3b (ENSSLDG00000003130) #34 rpl39 (ENSSLDG00000003149) #35 SOWAHD (ENSSLDG00000003228) #36 ENSSLDG00000003238 septin6 (ENSSLDG00000003277) #37 nkrf (ENSSLDG00000003347) ube2a (ENSSLDG00000003360) elf1 (ENSSLDG00000003395) Greater amberjack MODERN SPECIES 113 FAT2 (ENSSDUG00000006306) mtnr1al (ENSSDUG00000006290) SLC36A1 (ENSSDUG00000006270) atox1 (ENSSDUG00000006254) sytl4 (ENSSDUG00000006223) trmt12 (ENSSDUG00000006168) zdhhc9 (ENSSDUG00000006121) SASH3 (ENSSDUG00000006109) xpnpep2 (ENSSDUG00000006081) apln (ENSSDUG00000006075) ENSSDUG00000006035 ocrl (ENSSDUG00000005993) ENSSDUG00000005968 clic2 (ENSSDUG00000005952) urp1 (ENSSDUG00000005921) c1galt1c1 (ENSSDUG00000005906) #22 mcts1 (ENSSDUG00000005874) #23 cul4b (ENSSDUG00000005826) #24 lamp2 (ENSSDUG00000005799) #25 ATP1B4 (ENSSDUG00000005779) #26 TMEM255A (ENSSDUG00000005759) #27 zbtb33 (ENSSDUG00000005743) #28 nkap (ENSSDUG00000005718) ndufa1 (ENSSDUG00000005707) #32 upf3b (ENSSDUG00000005682) #34 rpl39 (ENSSDUG00000005659) ##35 SOWAHD (ENSSDUG00000005649) #36 ENSSDUG00000005623 septin6 (ENSSDUG00000005575) #37 nkrf (ENSSDUG00000005559) ube2a (ENSSDUG00000005534) Pleuronectoidei ANCESTRAL SPECIES 19 ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000174555 ENSGT00950000184267 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000181367 ENSGT00940000163102 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 Turbot MODERN SPECIES 4 ENSSMAG00000013440 ENSSMAG00000030750 mid1ip1l (ENSSMAG00000031745) tspan7 (ENSSMAG00000013355) ENSSMAG00000013273 SYTL4 (ENSSMAG00000013257) trmt12 (ENSSMAG00000013247) zdhhc9 (ENSSMAG00000013239) SASH3 (ENSSMAG00000013234) xpnpep2 (ENSSMAG00000013218) ENSSMAG00000013212 ocrl (ENSSMAG00000013174) ENSSMAG00000037650 clic2 (ENSSMAG00000013119) urp1 (ENSSMAG00000027422) C1GALT1C1 (ENSSMAG00000013084) #22 mcts1 (ENSSMAG00000013065) #23 CUL4B (ENSSMAG00000013016) #24 lamp2 (ENSSMAG00000013000) #25 ATP1B4 (ENSSMAG00000012991) #26 TMEM255A (ENSSMAG00000012967) #27 zbtb33 (ENSSMAG00000012963) #28 ENSSMAG00000012956 nkap (ENSSMAG00000036193) ndufa1 (ENSSMAG00000030078) #32 upf3b (ENSSMAG00000012913) #34 rpl39 (ENSSMAG00000012880) #35 SOWAHD (ENSSMAG00000012857) #36 ENSSMAG00000012866 septin6 (ENSSMAG00000012785) #37 NKRF (ENSSMAG00000026898) Tongue sole MODERN SPECIES 6 tspan7 (ENSCSEG00000002655) mid1ip1l (ENSCSEG00000002652) ENSCSEG00000002632 ENSCSEG00000002596 nox1 (ENSCSEG00000002542) xkrx (ENSCSEG00000002537) tmem35 (ENSCSEG00000002535) arl13a (ENSCSEG00000002533) ENSCSEG00000002209 ENSCSEG00000002204 ENSCSEG00000002196 drp2 (ENSCSEG00000002166) ENSCSEG00000002143 clic2 (ENSCSEG00000002126) urp1 (ENSCSEG00000002136) c1galt1c1 (ENSCSEG00000002125) #22 mcts1 (ENSCSEG00000002120) #23 cul4b (ENSCSEG00000002108) #24 lamp2 (ENSCSEG00000002101) #25 ATP1B4 (ENSCSEG00000002087) #26 TMEM255A (ENSCSEG00000002065) #27 zbtb33 (ENSCSEG00000002063) #28 nkap (ENSCSEG00000002055) ENSCSEG00000002051 upf3b (ENSCSEG00000002046) #34 rpl39 (ENSCSEG00000002037) #35 SOWAHD (ENSCSEG00000002035) #36 ENSCSEG00000002029 septin6 (ENSCSEG00000002026) #37 nkrf (ENSCSEG00000002024) ube2a (ENSCSEG00000002017) Anabantaria ANCESTRAL SPECIES 15 ENSGT00940000158987 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Zig-zag eel MODERN SPECIES 1 cstf2 (ENSMAMG00000028209) ENSMAMG00000026905 mid1ip1l (ENSMAMG00000020348) tspan7 (ENSMAMG00000020336) ENSMAMG00000020328 SYTL4 (ENSMAMG00000020318) trmt12 (ENSMAMG00000020311) zdhhc9 (ENSMAMG00000020303) SASH3 (ENSMAMG00000020298) xpnpep2 (ENSMAMG00000020280) ENSMAMG00000026379 ocrl (ENSMAMG00000020233) ENSMAMG00000026034 clic2 (ENSMAMG00000020180) urp1 (ENSMAMG00000020174) C1GALT1C1 (ENSMAMG00000020172) #22 mcts1 (ENSMAMG00000020164) #23 CUL4B (ENSMAMG00000020138) #24 lamp2 (ENSMAMG00000020134) #25 ATP1B4 (ENSMAMG00000020126) #26 TMEM255A (ENSMAMG00000020102) #27 zbtb33 (ENSMAMG00000020098) #28 nkap (ENSMAMG00000020080) ndufa1 (ENSMAMG00000020091) #32 upf3b (ENSMAMG00000020069) #34 rpl39 (ENSMAMG00000020041) #35 SOWAHD (ENSMAMG00000020031) #36 ENSMAMG00000020021 septin6 (ENSMAMG00000019988) #37 NKRF (ENSMAMG00000019960) UBE2A (ENSMAMG00000027686) Anabantoidei ANCESTRAL SPECIES 11 ENSGT00940000158987 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000157996 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00670000099471 ENSGT00940000155145 #22 ENSGT00550000074964 #23 ENSGT00940000155339 #24 ENSGT00950000182899.B.b #25 ENSGT01030000234579.B.a #26 ENSGT00940000160471 #27 ENSGT00940000157481 #28 ENSGT00940000165950 ENSGT00390000007560 #32 ENSGT00390000017146.a #34 ENSGT00390000014814.b #35 ENSGT00950000183003.a.a.a.b #36 ENSGT00730000112008 ENSGT00940000158026 #37 ENSGT00940000157256 ENSGT00940000155075.a.b Climbing perch MODERN SPECIES 1 ENSATEG00000018219 mid1ip1l (ENSATEG00000029233) tspan7 (ENSATEG00000018251) ENSATEG00000018274 SYTL4 (ENSATEG00000018293) trmt12 (ENSATEG00000018316) zdhhc9 (ENSATEG00000018338) SASH3 (ENSATEG00000018363) xpnpep2 (ENSATEG00000018382) apln (ENSATEG00000028428) ocrl (ENSATEG00000018445) ENSATEG00000018469 ENSATEG00000027404 clic2 (ENSATEG00000018502) urp1 (ENSATEG00000018530) C1GALT1C1 (ENSATEG00000018572) #22 mcts1 (ENSATEG00000018544) #23 CUL4B (ENSATEG00000018579) #24 lamp2 (ENSATEG00000018629) #25 ATP1B4 (ENSATEG00000018642) #26 TMEM255A (ENSATEG00000018656) #27 zbtb33 (ENSATEG00000018688) #28 nkap (ENSATEG00000018696) ndufa1 (ENSATEG00000018725) #32 upf3b (ENSATEG00000018742) #34 rpl39 (ENSATEG00000028629) #35 SOWAHD (ENSATEG00000018757) #36 ENSATEG00000018798 septin6 (ENSATEG00000018814) #37 NKRF (ENSATEG00000018834) UBE2A (ENSATEG00000000046) Siamese fighting fish MODERN SPECIES 1 cstf2 (ENSBSLG00000022622) ENSBSLG00000022638 mid1ip1l (ENSBSLG00000022643) tspan7 (ENSBSLG00000022645) SRPX2 (ENSBSLG00000022653) sytl4 (ENSBSLG00000022684) trmt12 (ENSBSLG00000022694) zdhhc9 (ENSBSLG00000022704) SASH3 (ENSBSLG00000022706) xpnpep2 (ENSBSLG00000022722) ENSBSLG00000022743 ocrl (ENSBSLG00000022791) ENSBSLG00000023697 clic2 (ENSBSLG00000023714) urp1 (ENSBSLG00000023726) c1galt1c1 (ENSBSLG00000023729) #22 mcts1 (ENSBSLG00000023733) #23 cul4b (ENSBSLG00000023783) #24 lamp2 (ENSBSLG00000024273) #25 ATP1B4 (ENSBSLG00000024279) #26 TMEM255A (ENSBSLG00000024285) #27 zbtb33 (ENSBSLG00000024287) #28 nkap (ENSBSLG00000024289) ndufa1 (ENSBSLG00000024297) #32 upf3b (ENSBSLG00000024302) #34 rpl39 (ENSBSLG00000024309) #35 SOWAHD (ENSBSLG00000024315) #36 ENSBSLG00000024317 septin6 (ENSBSLG00000024334) #37 nkrf (ENSBSLG00000024604) ube2a (ENSBSLG00000024613) Elephant shark MODERN SPECIES 1487 ENSCMIG00000015379 ENSCMIG00000015378 mtmr8 (ENSCMIG00000015259) shisa2a (ENSCMIG00000015225) ENSCMIG00000015222 ENSCMIG00000015194 zc4h2 (ENSCMIG00000015176) ZC3H12B (ENSCMIG00000015170) ENSCMIG00000015167 msna (ENSCMIG00000014840) ENSCMIG00000014769 ENSCMIG00000014768 ENSCMIG00000014767 ENSCMIG00000014766 nono (ENSCMIG00000014765) ENSCMIG00000014763 #22 cul4b (ENSCMIG00000014467) #24 ENSCMIG00000014398 lamp2 (ENSCMIG00000014391) #25 tfdp1a (ENSCMIG00000014387) ATP1B4 (ENSCMIG00000014383) #26 TMEM255A (ENSCMIG00000014382) #27 zbtb33 (ENSCMIG00000014381) #28 nkap (ENSCMIG00000014378) ENSCMIG00000014374 #31 ENSCMIG00000014372 ENSCMIG00000014370 ndufa1 (ENSCMIG00000014367) #32 ENSCMIG00000014364 #34 ENSCMIG00000014360 septin6 (ENSCMIG00000014022) #37 Cyclostomata ANCESTRAL SPECIES ENSGT00940000155145 #22 Hagfish MODERN SPECIES 696 ENSEBUG00000013522 pisd (ENSEBUG00000001625) ENSEBUG00000006256 ENSEBUG00000014129 prpf8 (ENSEBUG00000006548) ENSEBUG00000010156 ENSEBUG00000005079 ENSEBUG00000010772 ENSEBUG00000009252 slc5a1 (ENSEBUG00000015829) gucy1b1 (ENSEBUG00000003149) ENSEBUG00000015172 pgk1 (ENSEBUG00000000741) ENSEBUG00000011074 #22 ENSEBUG00000010485 fryl (ENSEBUG00000001309) ENSEBUG00000004909 ENSEBUG00000007909 ENSEBUG00000007403 ENSEBUG00000011317 OCA2 (ENSEBUG00000012583) ENSEBUG00000016083 ENSEBUG00000008155 ENSEBUG00000016599 ENSEBUG00000016327 ENSEBUG00000016355 ENSEBUG00000010798 ENSEBUG00000016324 ENSEBUG00000001693