Rodentia	ANCESTRAL SPECIES		ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000018245.d #28	ENSGT00940000157721 #30	ENSGT00940000162061 #32	ENSGT01000000214434.F #33	ENSGT00940000159251 #34	ENSGT00940000155417 #35	ENSGT00390000008678 #36	ENSGT00950000182916.a.b.a.a.a.a #37	ENSGT00910000147158	ENSGT00940000157668	ENSGT00940000155136	ENSGT01050000244818
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000018245.d #28	ENSGT00940000157721 #30	ENSGT00940000162061 #32	ENSGT01000000214434.F #33	ENSGT00940000159251 #34	ENSGT00940000155417 #35	ENSGT00390000008678 #36	ENSGT00950000182916.a.b.a.a.a.a #37	ENSGT00910000147158	ENSGT00940000157668	ENSGT00940000155136	ENSGT01050000244818
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000018245.d #28	ENSGT00940000157721 #30	ENSGT00940000162061 #32	ENSGT01000000214434.F #33	ENSGT00940000159251 #34	ENSGT00940000155417 #35	ENSGT00390000008678 #36	ENSGT00950000182916.a.b.a.a.a.a #37	ENSGT00910000147158	ENSGT00940000157668	ENSGT00940000155136	ENSGT00940000158468
Eurasian red squirrel	MODERN SPECIES		TTC4 (ENSSVLG00005002585) #7	PARS2 (ENSSVLG00005002598) #8	TTC22 (ENSSVLG00005002607) #9	LEXM (ENSSVLG00005002630) #10	DHCR24 (ENSSVLG00005002661) #11	TMEM61 (ENSSVLG00005002679) #12	BSND (ENSSVLG00005002695) #13	ENSSVLG00005002710 #14	PCSK9 (ENSSVLG00005002723) #15	USP24 (ENSSVLG00005002787) #16	ENSSVLG00005002926 #17	PLPP3 (ENSSVLG00005002950) #18	PRKAA2 (ENSSVLG00005002966) #19	ENSSVLG00005002991 #20	FYB2 (ENSSVLG00005003020) #21	C8A (ENSSVLG00005003067) #22	ENSSVLG00005003101 #23	C8B (ENSSVLG00005003135) #24	DAB1 (ENSSVLG00005003231) #25	ENSSVLG00005003346 #26	OMA1 (ENSSVLG00005003366) #27	TACSTD2 (ENSSVLG00005003391) #28	ENSSVLG00005003403 #29	ENSSVLG00005003426 #30	ENSSVLG00005003468 #31	JUN (ENSSVLG00005003485) #32	FGGY (ENSSVLG00005003528) #33	HOOK1 (ENSSVLG00005003597) #34	CYP2J2 (ENSSVLG00005003643) #35	C1orf87 (ENSSVLG00005003680) #36	NFIA (ENSSVLG00005003823) #37
Marmotini	ANCESTRAL SPECIES		ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000018245.d #28	ENSGT00940000157721 #30	ENSGT00940000162061 #32	ENSGT01000000214434.F #33	ENSGT00940000159251 #34	ENSGT00940000155417 #35	ENSGT00390000008678 #36	ENSGT00950000182916.a.b.a.a.a.a #37	ENSGT00910000147158	ENSGT00940000157668	ENSGT00390000009895.i.b.b	ENSGT00940000155136
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000018245.d #28	ENSGT00940000157721 #30	ENSGT00940000162061 #32	ENSGT01000000214434.F #33	ENSGT00940000159251 #34	ENSGT00940000155417 #35	ENSGT00390000008678 #36	ENSGT00950000182916.a.b.a.a.a.a #37	ENSGT00910000147158	ENSGT00940000157668	ENSGT00390000009895.i.b.b	ENSGT00940000155136
Arctic ground squirrel	MODERN SPECIES	21	ACOT11 (ENSUPAG00010021314)	ENSUPAG00010021310	MROH7 (ENSUPAG00010021298)	TTC4 (ENSUPAG00010021273) #7	PARS2 (ENSUPAG00010021270) #8	TTC22 (ENSUPAG00010021265) #9	LEXM (ENSUPAG00010021257) #10	DHCR24 (ENSUPAG00010021243) #11	TMEM61 (ENSUPAG00010021239) #12	BSND (ENSUPAG00010021235) #13	PCSK9 (ENSUPAG00010021222) #15	USP24 (ENSUPAG00010021048) #16	PLPP3 (ENSUPAG00010021028) #18	PRKAA2 (ENSUPAG00010021017) #19	FYB2 (ENSUPAG00010021000) #21	C8A (ENSUPAG00010020967) #22	C8B (ENSUPAG00010020949) #24	DAB1 (ENSUPAG00010020931) #25	OMA1 (ENSUPAG00010020921) #27	TACSTD2 (ENSUPAG00010020919) #28	MYSM1 (ENSUPAG00010020909) #30	JUN (ENSUPAG00010020905) #32	FGGY (ENSUPAG00010020815) #33	HOOK1 (ENSUPAG00010020795) #34
Squirrel	MODERN SPECIES	122	SSBP3 (ENSSTOG00000028647)	ACOT11 (ENSSTOG00000011514)	MROH7 (ENSSTOG00000012202)	TTC4 (ENSSTOG00000020920) #7	PARS2 (ENSSTOG00000012213) #8	TTC22 (ENSSTOG00000019501) #9	LEXM (ENSSTOG00000004048) #10	DHCR24 (ENSSTOG00000004062) #11	TMEM61 (ENSSTOG00000023477) #12	BSND (ENSSTOG00000004079) #13	PCSK9 (ENSSTOG00000005400) #15	USP24 (ENSSTOG00000005425) #16	PLPP3 (ENSSTOG00000027611) #18	PRKAA2 (ENSSTOG00000010330) #19	FYB2 (ENSSTOG00000008494) #21	C8A (ENSSTOG00000008536) #22	C8B (ENSSTOG00000008556) #24	DAB1 (ENSSTOG00000005967) #25	OMA1 (ENSSTOG00000002080) #27	TACSTD2 (ENSSTOG00000002090) #28	ENSSTOG00000012575	MYSM1 (ENSSTOG00000024678) #30	JUN (ENSSTOG00000028549) #32	FGGY (ENSSTOG00000014941) #33	ENSSTOG00000027301 #34	ENSSTOG00000033170 #35	ENSSTOG00000015921 #35	C1orf87 (ENSSTOG00000001016) #36	NFIA (ENSSTOG00000002734) #37	TM2D1 (ENSSTOG00000008651)	PATJ (ENSSTOG00000015380)
Alpin marmot	MODERN SPECIES	15	FAM151A (ENSMMMG00000015320)	MROH7 (ENSMMMG00000015298)	TTC4 (ENSMMMG00000015265) #7	PARS2 (ENSMMMG00000015260) #8	TTC22 (ENSMMMG00000015250) #9	LEXM (ENSMMMG00000015207) #10	DHCR24 (ENSMMMG00000015203) #11	TMEM61 (ENSMMMG00000015201) #12	BSND (ENSMMMG00000015199) #13	PCSK9 (ENSMMMG00000015192) #15	USP24 (ENSMMMG00000015087) #16	ENSMMMG00000015077	PLPP3 (ENSMMMG00000015064) #18	PRKAA2 (ENSMMMG00000015055) #19	ENSMMMG00000015035	C8A (ENSMMMG00000015000) #22	C8B (ENSMMMG00000014972) #24	DAB1 (ENSMMMG00000014953) #25	OMA1 (ENSMMMG00000014939) #27	TACSTD2 (ENSMMMG00000014938) #28	MYSM1 (ENSMMMG00000014904) #30	JUN (ENSMMMG00000014900) #32	FGGY (ENSMMMG00000014858) #33	HOOK1 (ENSMMMG00000014799) #34	CYP2J2 (ENSMMMG00000014784) #35	ENSMMMG00000014775 #36	ENSMMMG00000014756	NFIA (ENSMMMG00000014681) #37	TM2D1 (ENSMMMG00000014648)	ENSMMMG00000014629	ENSMMMG00000014624
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00950000183049.B	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000018245.d #28	ENSGT00940000157721 #30	ENSGT00940000162061 #32	ENSGT01000000214434.F #33	ENSGT00940000159251 #34
Naked mole-rat female	MODERN SPECIES	26	KLHL17 (ENSHGLG00000006441)	ENSHGLG00000006852	ENSHGLG00000007201	TTC4 (ENSHGLG00000003409) #7	PARS2 (ENSHGLG00000003221) #8	TTC22 (ENSHGLG00000034170) #9	LEXM (ENSHGLG00000002841) #10	DHCR24 (ENSHGLG00000002794) #11	BSND (ENSHGLG00000015692) #13	PCSK9 (ENSHGLG00000018754) #15	USP24 (ENSHGLG00000019130) #16	ENSHGLG00000018134	PPAP2B (ENSHGLG00000038086) #18	PRKAA2 (ENSHGLG00000003818) #19	FYB2 (ENSHGLG00000039712) #21	C8A (ENSHGLG00000003411) #22	C8B (ENSHGLG00000003225) #24	DAB1 (ENSHGLG00000002862) #25	OMA1 (ENSHGLG00000002420) #27	TACSTD2 (ENSHGLG00000041310) #28	MYSM1 (ENSHGLG00000002084) #30	JUN (ENSHGLG00000036998) #32	ENSHGLG00000036231	FGGY (ENSHGLG00000008168) #33	ENSHGLG00000007202 #34	ENSHGLG00000005780 #35	ENSHGLG00000034224	ENSHGLG00000006876 #35	ENSHGLG00000020133	ENSHGLG00000032436	ENSHGLG00000041067
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00950000183049.B	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00940000157721 #30	ENSGT00940000162061 #32	ENSGT01000000214434.F #33	ENSGT00940000159251 #34
Guinea pig	MODERN SPECIES	88	ACOT11 (ENSCPOG00000025743)	MROH7 (ENSCPOG00000020970)	TTC4 (ENSCPOG00000023172) #7	PARS2 (ENSCPOG00000025477) #8	TTC22 (ENSCPOG00000020552) #9	LEXM (ENSCPOG00000023996) #10	DHCR24 (ENSCPOG00000015629) #11	ENSCPOG00000012983	BSND (ENSCPOG00000030843) #13	PCSK9 (ENSCPOG00000015659) #15	USP24 (ENSCPOG00000015660) #16	ENSCPOG00000038201	PLPP3 (ENSCPOG00000022587) #18	PRKAA2 (ENSCPOG00000009969) #19	FYB2 (ENSCPOG00000014695) #21	C8A (ENSCPOG00000010898) #22	C8B (ENSCPOG00000012214) #24	DAB1 (ENSCPOG00000005440) #25	OMA1 (ENSCPOG00000007240) #27	MYSM1 (ENSCPOG00000006557) #30	JUN (ENSCPOG00000026377) #32	FGGY (ENSCPOG00000007007) #33	HOOK1 (ENSCPOG00000000142) #34	ENSCPOG00000039652	ENSCPOG00000004387
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000018245.d #28	ENSGT00940000157721 #30	ENSGT00940000162061 #32	ENSGT01000000214434.F #33	ENSGT00940000159251 #34	ENSGT00940000155417 #35	ENSGT00950000182879.b	ENSGT00390000008678 #36	ENSGT00950000182916.a.b.a.a.a.a #37	ENSGT00940000157668	ENSGT00940000155136	ENSGT01050000244818
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568.g.a
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00950000183049.B	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568.g.a
Golden Hamster	MODERN SPECIES	648	Ssbp3 (ENSMAUG00000001123)	Acot11 (ENSMAUG00000021710)	Fam151a (ENSMAUG00000019380)	Mroh7 (ENSMAUG00000011362)	Ttc4 (ENSMAUG00000013046) #7	Pars2 (ENSMAUG00000022043) #8	Ttc22 (ENSMAUG00000022009) #9	Lexm (ENSMAUG00000011184) #10	Dhcr24 (ENSMAUG00000010063) #11	Bsnd (ENSMAUG00000021088) #13	Pcsk9 (ENSMAUG00000021824) #15	ENSMAUG00000016142	Plpp3 (ENSMAUG00000003549) #18	Prkaa2 (ENSMAUG00000006545) #19	Fyb2 (ENSMAUG00000013449) #21	C8a (ENSMAUG00000011874) #22	C8b (ENSMAUG00000001377) #24	Dab1 (ENSMAUG00000008898) #25	Oma1 (ENSMAUG00000015220) #27	ENSMAUG00000005226	Slc35d1 (ENSMAUG00000011926)	Mier1 (ENSMAUG00000010939)	Dnai4 (ENSMAUG00000008194)	Insl5 (ENSMAUG00000002720)	Dynlt5 (ENSMAUG00000008063)	Sgip1 (ENSMAUG00000013637)	Pde4b (ENSMAUG00000018697)	ENSMAUG00000020650
Chinese hamster chok1gshd	MODERN SPECIES	111	Ttc4 (ENSCGRG00001002213) #7	Pars2 (ENSCGRG00001013821) #8	Ttc22 (ENSCGRG00001014526) #9	Lexm (ENSCGRG00001015706) #10	Dhcr24 (ENSCGRG00001023072) #11	Bsnd (ENSCGRG00001000420) #13	Pcsk9 (ENSCGRG00001002601) #15	Usp24 (ENSCGRG00001016152) #16	ENSCGRG00001004231	ENSCGRG00001014852	ENSCGRG00001015179	ENSCGRG00001015633	Plpp3 (ENSCGRG00001018283) #18	Prkaa2 (ENSCGRG00001019125) #19	Fyb2 (ENSCGRG00001024683) #21	C8a (ENSCGRG00001003120) #22	C8b (ENSCGRG00001009616) #24	Dab1 (ENSCGRG00001020473) #25	ENSCGRG00001011317	ENSCGRG00001022662	Oma1 (ENSCGRG00001019711) #27	4921539E11Rik (ENSCGRG00001020618)	Slc35d1 (ENSCGRG00001022056)	Mier1 (ENSCGRG00001002839)	Dnai4 (ENSCGRG00001013824)	Insl5 (ENSCGRG00001018011)	Dynlt5 (ENSCGRG00001018434)	Sgip1 (ENSCGRG00001006459)	Pde4b (ENSCGRG00001000502)	Lepr (ENSCGRG00001013297)	Leprot (ENSCGRG00001018267)
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568.g.a
Northern American deer mouse	MODERN SPECIES	11	Acot11 (ENSPEMG00000012150)	Fam151a (ENSPEMG00000017240)	Mroh7 (ENSPEMG00000013097)	Ttc4 (ENSPEMG00000011416) #7	Pars2 (ENSPEMG00000004864) #8	Ttc22 (ENSPEMG00000015966) #9	Lexm (ENSPEMG00000011272) #10	Dhcr24 (ENSPEMG00000018091) #11	ENSPEMG00000030987 #12	Bsnd (ENSPEMG00000006993) #13	Pcsk9 (ENSPEMG00000014728) #15	Usp24 (ENSPEMG00000014199) #16	Plpp3 (ENSPEMG00000031102) #18	Prkaa2 (ENSPEMG00000016917) #19	Fyb2 (ENSPEMG00000000327) #21	C8a (ENSPEMG00000001782) #22	C8b (ENSPEMG00000015696) #24	Dab1 (ENSPEMG00000009115) #25	Oma1 (ENSPEMG00000024136) #27	ENSPEMG00000012355	Slc35d1 (ENSPEMG00000024230)	Mier1 (ENSPEMG00000018047)	Dnai4 (ENSPEMG00000023810)	Insl5 (ENSPEMG00000007310)	Dynlt5 (ENSPEMG00000031134)	Sgip1 (ENSPEMG00000023234)	Pde4b (ENSPEMG00000021904)	ENSPEMG00000021391	ENSPEMG00000029823	ENSPEMG00000005306	Lepr (ENSPEMG00000013702)
Prairie vole	MODERN SPECIES	1	Ssbp3 (ENSMOCG00000012660)	ENSMOCG00000013287	Fam151a (ENSMOCG00000021039)	Mroh7 (ENSMOCG00000004286)	Ttc4 (ENSMOCG00000019343) #7	Pars2 (ENSMOCG00000018351) #8	Ttc22 (ENSMOCG00000003317) #9	Lexm (ENSMOCG00000015782) #10	Dhcr24 (ENSMOCG00000013412) #11	Bsnd (ENSMOCG00000005609) #13	Pcsk9 (ENSMOCG00000014339) #15	Usp24 (ENSMOCG00000022245) #16	Plpp3 (ENSMOCG00000013244) #18	Prkaa2 (ENSMOCG00000013455) #19	Fyb2 (ENSMOCG00000012363) #21	C8a (ENSMOCG00000009752) #22	C8b (ENSMOCG00000001170) #24	Dab1 (ENSMOCG00000006254) #25	Oma1 (ENSMOCG00000017366) #27	4921539E11Rik (ENSMOCG00000012861)	Slc35d1 (ENSMOCG00000011734)	Mier1 (ENSMOCG00000004857)	Dnai4 (ENSMOCG00000022543)	Insl5 (ENSMOCG00000017365)	Dynlt5 (ENSMOCG00000016376)	Sgip1 (ENSMOCG00000020243)	ENSMOCG00000007698	Pde4b (ENSMOCG00000017467)	Lepr (ENSMOCG00000014570)	Leprot (ENSMOCG00000019296)	Dnajc6 (ENSMOCG00000018708)
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755
Mus	ANCESTRAL SPECIES	3	ENSGT00940000156460.C	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.a	ENSGT01030000234531.A.b.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a
Mus_A	ANCESTRAL SPECIES	3	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00950000183087.A.a.b.b.g.m.a.b.b.b.b	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.b	ENSGT01030000234531.A.b.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.a	ENSGT01030000234531.A.b.a.b
Mus_B	ANCESTRAL SPECIES	5	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00950000183087.A.a.b.b.g.m.a.b.b.b.b	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.b	ENSGT01030000234531.A.b.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.a	ENSGT01030000234531.A.b.a.b
Mus_C	ANCESTRAL SPECIES	2	ENSGT00530000063681.b.b	ENSGT00940000161775	ENSGT00510000049371 #7	ENSGT00390000010922 #8	ENSGT00390000007658 #9	ENSGT00390000015471 #10	ENSGT00390000008338 #11	ENSGT00390000007464 #12	ENSGT00390000008549 #13	ENSGT00490000043472 #15	ENSGT00940000159474 #16	ENSGT00950000183087.A.a.b.b.g.m.a.b.b.b.b	ENSGT00940000156450 #18	ENSGT00940000156945 #19	ENSGT00530000063460.A.a #21	ENSGT00940000160126 #22	ENSGT00940000160247 #24	ENSGT00940000158038 #25	ENSGT00390000007027 #27	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.a	ENSGT01030000234531.A.b.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a	ENSGT00730000111209
Steppe mouse	MODERN SPECIES	3172	Mroh7 (ENSMSIG00000028891)	ENSMSIG00000028860 #7	Pars2 (ENSMSIG00000028858) #8	Ttc22 (ENSMSIG00000028852) #9	Lexm (ENSMSIG00000028842) #10	Dhcr24 (ENSMSIG00000028839) #11	ENSMSIG00000028836 #12	Bsnd (ENSMSIG00000028832) #13	Pcsk9 (ENSMSIG00000028827) #15	Usp24 (ENSMSIG00000028765) #16	ENSMSIG00000028734	ENSMSIG00000028731	Plpp3 (ENSMSIG00000028724) #18	Prkaa2 (ENSMSIG00000028721) #19	Fyb2 (ENSMSIG00000028687) #21	C8a (ENSMSIG00000028660) #22	C8b (ENSMSIG00000028644) #24	ENSMSIG00000028637 #25	Glud1 (ENSMSIG00000028620)	ENSMSIG00000028614	ENSMSIG00000028610	Mmrn2 (ENSMSIG00000028602)	Bmpr1a (ENSMSIG00000028586)	9230112D13Rik (ENSMSIG00000028580)	Ldb3 (ENSMSIG00000028460)	Opn4 (ENSMSIG00000028439)	Wapl (ENSMSIG00000028406)
spretus	MODERN SPECIES	13	Fam151a (MGP_SPRETEiJ_G0027208)	Mroh7 (MGP_SPRETEiJ_G0027207)	Ttc4 (MGP_SPRETEiJ_G0027206) #7	Pars2 (MGP_SPRETEiJ_G0027205) #8	Ttc22 (MGP_SPRETEiJ_G0027204) #9	Lexm (MGP_SPRETEiJ_G0027203) #10	Dhcr24 (MGP_SPRETEiJ_G0027202) #11	Bsnd (MGP_SPRETEiJ_G0027201) #13	Pcsk9 (MGP_SPRETEiJ_G0027200) #15	Usp24 (MGP_SPRETEiJ_G0027199) #16	MGP_SPRETEiJ_G0027198	Plpp3 (MGP_SPRETEiJ_G0027197) #18	Prkaa2 (MGP_SPRETEiJ_G0027196) #19	Fyb2 (MGP_SPRETEiJ_G0027195) #21	MGP_SPRETEiJ_G0027194	C8a (MGP_SPRETEiJ_G0027193) #22	C8b (MGP_SPRETEiJ_G0027192) #24	Dab1 (MGP_SPRETEiJ_G0027191) #25	Oma1 (MGP_SPRETEiJ_G0027190) #27	4921539E11Rik (MGP_SPRETEiJ_G0027189)	Slc35d1 (MGP_SPRETEiJ_G0027188)	Mier1 (MGP_SPRETEiJ_G0027187)	Dnai4 (MGP_SPRETEiJ_G0027186)	Insl5 (MGP_SPRETEiJ_G0027185)	Dynlt5 (MGP_SPRETEiJ_G0027184)	Sgip1 (MGP_SPRETEiJ_G0027183)	Pde4b (MGP_SPRETEiJ_G0027182)	MGP_SPRETEiJ_G0027181	MGP_SPRETEiJ_G0027180	MGP_SPRETEiJ_G0027179	C130073F10Rik (MGP_SPRETEiJ_G0027178)
Mouse	MODERN SPECIES	13	Acot11 (ENSMUSG00000034853)	Fam151a (ENSMUSG00000034871)	Mroh7 (ENSMUSG00000047502)	Ttc4 (ENSMUSG00000025413) #7	Pars2 (ENSMUSG00000043572) #8	Ttc22 (ENSMUSG00000034919) #9	Lexm (ENSMUSG00000054362) #10	Dhcr24 (ENSMUSG00000034926) #11	Tmem61 (ENSMUSG00000085933) #12	Bsnd (ENSMUSG00000025418) #13	Pcsk9 (ENSMUSG00000044254) #15	Usp24 (ENSMUSG00000028514) #16	Plpp3 (ENSMUSG00000028517) #18	Prkaa2 (ENSMUSG00000028518) #19	Fyb2 (ENSMUSG00000078612) #21	C8a (ENSMUSG00000035031) #22	C8b (ENSMUSG00000029656) #24	Dab1 (ENSMUSG00000028519) #25	Oma1 (ENSMUSG00000035069) #27	4921539E11Rik (ENSMUSG00000028520)	Slc35d1 (ENSMUSG00000028521)	Mier1 (ENSMUSG00000028522)	Dnai4 (ENSMUSG00000035126)	Insl5 (ENSMUSG00000066090)	Dynlt5 (ENSMUSG00000028523)	Sgip1 (ENSMUSG00000028524)	Pde4b (ENSMUSG00000028525)	Gm12789 (ENSMUSG00000078625)	Gm12790 (ENSMUSG00000078626)	Pramel19 (ENSMUSG00000070890)	Pramel18 (ENSMUSG00000037028)
Ryukyu mouse	MODERN SPECIES	13	Fam151a (MGP_CAROLIEiJ_G0026239)	Mroh7 (MGP_CAROLIEiJ_G0026238)	Ttc4 (MGP_CAROLIEiJ_G0026237) #7	Pars2 (MGP_CAROLIEiJ_G0026236) #8	Ttc22 (MGP_CAROLIEiJ_G0026235) #9	Lexm (MGP_CAROLIEiJ_G0026234) #10	Dhcr24 (MGP_CAROLIEiJ_G0026233) #11	Bsnd (MGP_CAROLIEiJ_G0026232) #13	Pcsk9 (MGP_CAROLIEiJ_G0026231) #15	Usp24 (MGP_CAROLIEiJ_G0026230) #16	MGP_CAROLIEiJ_G0026229	Plpp3 (MGP_CAROLIEiJ_G0026228) #18	Prkaa2 (MGP_CAROLIEiJ_G0026227) #19	Fyb2 (MGP_CAROLIEiJ_G0026226) #21	MGP_CAROLIEiJ_G0026225	C8a (MGP_CAROLIEiJ_G0026224) #22	C8b (MGP_CAROLIEiJ_G0026223) #24	Dab1 (MGP_CAROLIEiJ_G0026222) #25	Oma1 (MGP_CAROLIEiJ_G0026221) #27	4921539E11Rik (MGP_CAROLIEiJ_G0026220)	Slc35d1 (MGP_CAROLIEiJ_G0026219)	Mier1 (MGP_CAROLIEiJ_G0026218)	Dnai4 (MGP_CAROLIEiJ_G0026217)	Insl5 (MGP_CAROLIEiJ_G0026216)	MGP_CAROLIEiJ_G0026215	Sgip1 (MGP_CAROLIEiJ_G0026214)	Pde4b (MGP_CAROLIEiJ_G0026213)	Gm12789 (MGP_CAROLIEiJ_G0026212)	MGP_CAROLIEiJ_G0026211	MGP_CAROLIEiJ_G0026210	C130073F10Rik (MGP_CAROLIEiJ_G0026209)
Shrew mouse	MODERN SPECIES	19	Ssbp3 (MGP_PahariEiJ_G0028575)	Acot11 (MGP_PahariEiJ_G0028574)	Fam151a (MGP_PahariEiJ_G0028573)	Mroh7 (MGP_PahariEiJ_G0028572)	Ttc4 (MGP_PahariEiJ_G0028571) #7	Pars2 (MGP_PahariEiJ_G0028570) #8	Ttc22 (MGP_PahariEiJ_G0028569) #9	Lexm (MGP_PahariEiJ_G0028568) #10	Dhcr24 (MGP_PahariEiJ_G0028567) #11	Bsnd (MGP_PahariEiJ_G0028566) #13	Pcsk9 (MGP_PahariEiJ_G0028565) #15	Usp24 (MGP_PahariEiJ_G0028564) #16	Plpp3 (MGP_PahariEiJ_G0028563) #18	Prkaa2 (MGP_PahariEiJ_G0028562) #19	Fyb2 (MGP_PahariEiJ_G0028561) #21	C8a (MGP_PahariEiJ_G0028560) #22	C8b (MGP_PahariEiJ_G0028559) #24	Dab1 (MGP_PahariEiJ_G0028558) #25	Oma1 (MGP_PahariEiJ_G0028557) #27	4921539E11Rik (MGP_PahariEiJ_G0028556)	Slc35d1 (MGP_PahariEiJ_G0028555)	Mier1 (MGP_PahariEiJ_G0028554)	Dnai4 (MGP_PahariEiJ_G0028553)	Insl5 (MGP_PahariEiJ_G0028552)	MGP_PahariEiJ_G0028551	Sgip1 (MGP_PahariEiJ_G0028550)	Pde4b (MGP_PahariEiJ_G0028549)	MGP_PahariEiJ_G0028548	MGP_PahariEiJ_G0028547	MGP_PahariEiJ_G0028546	Pramel17 (MGP_PahariEiJ_G0028545)
Rat	MODERN SPECIES	15	Mroh7 (ENSRNOG00000058870)	Ttc4 (ENSRNOG00000042467) #7	Pars2 (ENSRNOG00000007327) #8	Ttc22 (ENSRNOG00000007189) #9	Lexm (ENSRNOG00000030914) #10	Dhcr24 (ENSRNOG00000006787) #11	Tmem61 (ENSRNOG00000026594) #12	Bsnd (ENSRNOG00000006543) #13	Pcsk9 (ENSRNOG00000006280) #15	Usp24 (ENSRNOG00000005802) #16	AABR07049516.1 (ENSRNOG00000008516)	Plpp3 (ENSRNOG00000008116) #18	Prkaa2 (ENSRNOG00000007706) #19	Mt1m (ENSRNOG00000028841)	Fyb2 (ENSRNOG00000030938) #21	C8a (ENSRNOG00000007697) #22	C8b (ENSRNOG00000007639) #24	Dab1 (ENSRNOG00000007410) #25	Oma1 (ENSRNOG00000007214) #27	C5h1orf141 (ENSRNOG00000022890)	Slc35d1 (ENSRNOG00000022967)	Mier1 (ENSRNOG00000007175)	Dnai4 (ENSRNOG00000006999)	ENSRNOG00000067831	Dynlt5 (ENSRNOG00000023100)	Sgip1 (ENSRNOG00000006357)	Pde4b (ENSRNOG00000005905)	LOC120096581 (ENSRNOG00000045614)	ENSRNOG00000067146	Pramef12-ps1 (ENSRNOG00000037977)	ENSRNOG00000069853
Upper Galilee mountains blind mole rat	MODERN SPECIES	746																C8a (ENSNGAG00000019815) #22	C8b (ENSNGAG00000006426) #24	Dab1 (ENSNGAG00000020160) #25	Oma1 (ENSNGAG00000018246) #27	Slc35d1 (ENSNGAG00000020096)	Mier1 (ENSNGAG00000006460)	ENSNGAG00000008280	Dynlt5 (ENSNGAG00000010091)	Sgip1 (ENSNGAG00000015208)	Pde4b (ENSNGAG00000008558)	Lepr (ENSNGAG00000005263)	Leprot (ENSNGAG00000000423)	Dnajc6 (ENSNGAG00000005987)	Ak4 (ENSNGAG00000015116)	Jak1 (ENSNGAG00000008128)	Raver2 (ENSNGAG00000000905)
Lesser Egyptian jerboa	MODERN SPECIES	218												ENSJJAG00000018064	ENSJJAG00000011887	ENSJJAG00000000048	ENSJJAG00000000613	C8a (ENSJJAG00000010318) #22	C8b (ENSJJAG00000010317) #24	Dab1 (ENSJJAG00000012808) #25	Oma1 (ENSJJAG00000013382) #27
Kangaroo rat	MODERN SPECIES	380	Acot11 (ENSDORG00000013806)	Fam151a (ENSDORG00000013808)	Mroh7 (ENSDORG00000015064)	Ttc4 (ENSDORG00000019785) #7	Pars2 (ENSDORG00000013567) #8	Ttc22 (ENSDORG00000024952) #9	Lexm (ENSDORG00000006688) #10	Dhcr24 (ENSDORG00000006690) #11	Bsnd (ENSDORG00000026628) #13	ENSDORG00000029863	ENSDORG00000016633 #15	Usp24 (ENSDORG00000014930) #16	Plpp3 (ENSDORG00000025905) #18	Prkaa2 (ENSDORG00000009718) #19	Fyb2 (ENSDORG00000009719) #21	C8a (ENSDORG00000014884) #22	C8b (ENSDORG00000004936) #24	Dab1 (ENSDORG00000008981) #25	Oma1 (ENSDORG00000001344) #27	Tacstd2 (ENSDORG00000001347) #28	Mysm1 (ENSDORG00000029861) #30	Fggy (ENSDORG00000014277) #33	Hook1 (ENSDORG00000014283) #34	ENSDORG00000013315 #35	ENSDORG00000014288	Gm12695 (ENSDORG00000006672) #36	Nfia (ENSDORG00000005150) #37	ENSDORG00000005379	Patj (ENSDORG00000004176)	Ndc1 (ENSDORG00000008806)	Glis1 (ENSDORG00000007361)