Mammalia	ANCESTRAL SPECIES	77									ENSGT00390000004786	ENSGT00940000155458	ENSGT00940000159849	ENSGT00940000155308	ENSGT00390000007796	ENSGT00940000158442	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000155326 #20	ENSGT00490000043380	ENSGT00940000162174	ENSGT00950000186009	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11
Theria	ANCESTRAL SPECIES	103															ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26
Eutheria	ANCESTRAL SPECIES	11	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Glires	ANCESTRAL SPECIES	17	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Rodentia	ANCESTRAL SPECIES	18	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	16	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b	ENSGT00940000160207
Degu	MODERN SPECIES	78	ENSODEG00000020525 #7	TOP1 (ENSODEG00000014384) #8	ENSODEG00000020264 #9	PLCG1 (ENSODEG00000015157) #10	ZHX3 (ENSODEG00000014535) #11	ENSODEG00000014057 #12	LPIN3 (ENSODEG00000014914) #13	EMILIN3 (ENSODEG00000014427) #14	ENSODEG00000015358 #15	ENSODEG00000014457 #16	ENSODEG00000015660 #17	ENSODEG00000016376 #18	ENSODEG00000015100 #19	PTPRT (ENSODEG00000015540) #20	ENSODEG00000016510 #21	L3MBTL1 (ENSODEG00000014727) #22	ENSODEG00000015466 #23	SGK2 (ENSODEG00000014377) #24	ENSODEG00000014562 #25	MYBL2 (ENSODEG00000014783) #26	TOX2 (ENSODEG00000015129) #27	ENSODEG00000020224 #28	JPH2 (ENSODEG00000014658) #29	OSER1 (ENSODEG00000014978) #30	GDAP1L1 (ENSODEG00000014582) #31	FITM2 (ENSODEG00000014756) #32	R3HDML (ENSODEG00000015328) #33	HNF4A (ENSODEG00000015535) #34	TTPAL (ENSODEG00000014738) #35	SERINC3 (ENSODEG00000015456) #36	ENSODEG00000020242 #37
Long-tailed chinchilla	MODERN SPECIES	152	ADIG (ENSCLAG00000010538)	SLC32A1 (ENSCLAG00000009070)	ACTR5 (ENSCLAG00000008698)	PPP1R16B (ENSCLAG00000007143)	FAM83D (ENSCLAG00000008915)	DHX35 (ENSCLAG00000006320)	MAFB (ENSCLAG00000013826) #7	TOP1 (ENSCLAG00000008693) #8	PLCG1 (ENSCLAG00000011612) #10	ZHX3 (ENSCLAG00000010431) #11	LPIN3 (ENSCLAG00000011160) #13	EMILIN3 (ENSCLAG00000011310) #14	CHD6 (ENSCLAG00000013743) #16	PTPRT (ENSCLAG00000006398) #20	SRSF6 (ENSCLAG00000010247) #21	L3MBTL1 (ENSCLAG00000008738) #22	SGK2 (ENSCLAG00000010710) #24	IFT52 (ENSCLAG00000015164) #25	MYBL2 (ENSCLAG00000010803) #26	TOX2 (ENSCLAG00000005127) #27	JPH2 (ENSCLAG00000007741) #29	OSER1 (ENSCLAG00000007155) #30	GDAP1L1 (ENSCLAG00000006787) #31	FITM2 (ENSCLAG00000006660) #32	R3HDML (ENSCLAG00000015731) #33	HNF4A (ENSCLAG00000016192) #34	TTPAL (ENSCLAG00000007855) #35	SERINC3 (ENSCLAG00000005719) #36	PKIG (ENSCLAG00000004821)	ADA (ENSCLAG00000011565)	CCN5 (ENSCLAG00000010929)
Guinea pig	MODERN SPECIES	45	ENSCPOG00000032053	SLC32A1 (ENSCPOG00000008620)	ACTR5 (ENSCPOG00000011529)	PPP1R16B (ENSCPOG00000007123)	FAM83D (ENSCPOG00000026951)	DHX35 (ENSCPOG00000012411)	MAFB (ENSCPOG00000036987) #7	TOP1 (ENSCPOG00000009076) #8	PLCG1 (ENSCPOG00000025138) #10	ZHX3 (ENSCPOG00000002738) #11	LPIN3 (ENSCPOG00000015637) #13	EMILIN3 (ENSCPOG00000015640) #14	CHD6 (ENSCPOG00000015641) #16	PTPRT (ENSCPOG00000014543) #20	SRSF6 (ENSCPOG00000011761) #21	L3MBTL1 (ENSCPOG00000008941) #22	SGK2 (ENSCPOG00000020415) #24	IFT52 (ENSCPOG00000027175) #25	MYBL2 (ENSCPOG00000020458) #26	GTSF1L (ENSCPOG00000008201)	TOX2 (ENSCPOG00000009234) #27	JPH2 (ENSCPOG00000022868) #29	OSER1 (ENSCPOG00000037909) #30	GDAP1L1 (ENSCPOG00000023160) #31	FITM2 (ENSCPOG00000035193) #32	R3HDML (ENSCPOG00000015258) #33	HNF4A (ENSCPOG00000006812) #34	TTPAL (ENSCPOG00000030925) #35	SERINC3 (ENSCPOG00000002012) #36	PKIG (ENSCPOG00000035868)	ADA (ENSCPOG00000006159)
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000015122	ENSHGLG00000039241	ENSHGLG00000047709	ENSHGLG00000015148	ENSHGLG00000015153	ENSHGLG00000048628	ENSHGLG00000034785	ENSHGLG00000045800	ENSHGLG00000000498	ENSHGLG00000008276	ENSHGLG00000005942	ENSHGLG00000040558	ENSHGLG00000000177	ENSHGLG00000011912 #20	SRSF6 (ENSHGLG00000041107) #21	L3MBTL1 (ENSHGLG00000004174) #22	SGK2 (ENSHGLG00000008102) #24	ENSHGLG00000005708 #25	ENSHGLG00000008986 #26	TOX2 (ENSHGLG00000006575) #27	JPH2 (ENSHGLG00000005156) #29	OSER1 (ENSHGLG00000004751) #30	ENSHGLG00000004713	GDAP1L1 (ENSHGLG00000004611) #31	FITM2 (ENSHGLG00000004512) #32	R3HDML (ENSHGLG00000049711) #33	ENSHGLG00000038239	HNF4A (ENSHGLG00000032220) #34	ENSHGLG00000009149	TTPAL (ENSHGLG00000008136) #35	ENSHGLG00000007807 #36
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Marmotini	ANCESTRAL SPECIES	5	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Alpin marmot	MODERN SPECIES		SLC32A1 (ENSMMMG00000015269)	ACTR5 (ENSMMMG00000015244)	PPP1R16B (ENSMMMG00000015214)	ENSMMMG00000015206	DHX35 (ENSMMMG00000015168)	ENSMMMG00000015129 #7	TOP1 (ENSMMMG00000015112) #8	ZHX3 (ENSMMMG00000014514) #11	ENSMMMG00000014500 #13	EMILIN3 (ENSMMMG00000014473) #14	CHD6 (ENSMMMG00000014402) #16	ENSMMMG00000014391	PTPRT (ENSMMMG00000013963) #20	ENSMMMG00000013940	ENSMMMG00000013932 #21	L3MBTL1 (ENSMMMG00000013828) #22	SGK2 (ENSMMMG00000013793) #24	IFT52 (ENSMMMG00000013772) #25	MYBL2 (ENSMMMG00000013751) #26	GTSF1L (ENSMMMG00000013745)	TOX2 (ENSMMMG00000013708) #27	ENSMMMG00000013694 #29	OSER1 (ENSMMMG00000013683) #30	GDAP1L1 (ENSMMMG00000013671) #31	FITM2 (ENSMMMG00000013666) #32	R3HDML (ENSMMMG00000013658) #33	HNF4A (ENSMMMG00000013628) #34	TTPAL (ENSMMMG00000013622) #35	SERINC3 (ENSMMMG00000013611) #36	PKIG (ENSMMMG00000013597)	EDN3 (ENSMMMG00000013570)
Marmotini_b	ANCESTRAL SPECIES	29	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00950000183210.d.a.c.a.a.a	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Arctic ground squirrel	MODERN SPECIES	24	ACTR5 (ENSUPAG00010002443)	PPP1R16B (ENSUPAG00010002431)	FAM83D (ENSUPAG00010002418)	DHX35 (ENSUPAG00010002331)	ENSUPAG00010002311	MAFB (ENSUPAG00010002307) #7	TOP1 (ENSUPAG00010002274) #8	PLCG1 (ENSUPAG00010002241) #10	ZHX3 (ENSUPAG00010002229) #11	LPIN3 (ENSUPAG00010002149) #13	EMILIN3 (ENSUPAG00010002135) #14	CHD6 (ENSUPAG00010002013) #16	PTPRT (ENSUPAG00010001533) #20	ENSUPAG00010001503	ENSUPAG00010001491 #21	L3MBTL1 (ENSUPAG00010001356) #22	SGK2 (ENSUPAG00010001287) #24	IFT52 (ENSUPAG00010001265) #25	MYBL2 (ENSUPAG00010001240) #26	GTSF1L (ENSUPAG00010001233)	TOX2 (ENSUPAG00010001162) #27	JPH2 (ENSUPAG00010001141) #29	OSER1 (ENSUPAG00010001120) #30	GDAP1L1 (ENSUPAG00010001085) #31	FITM2 (ENSUPAG00010001078) #32	R3HDML (ENSUPAG00010001066) #33	HNF4A (ENSUPAG00010001027) #34	TTPAL (ENSUPAG00010001019) #35	SERINC3 (ENSUPAG00010001003) #36	PKIG (ENSUPAG00010000983)
Squirrel	MODERN SPECIES	130	PPL (ENSSTOG00000021525)	UBN1 (ENSSTOG00000012339)	GLYR1 (ENSSTOG00000012326)	SMIM22 (ENSSTOG00000033771)	ROGDI (ENSSTOG00000028093)	SEPTIN12 (ENSSTOG00000012312)	DNAAF8 (ENSSTOG00000003545)	ANKS3 (ENSSTOG00000003522)	MGRN1 (ENSSTOG00000024399)	UBALD1 (ENSSTOG00000012650)	ENSSTOG00000026556	HMOX2 (ENSSTOG00000020386)	CDIP1 (ENSSTOG00000011973)	PTPRT (ENSSTOG00000008926) #20	SRSF6 (ENSSTOG00000010866) #21	L3MBTL1 (ENSSTOG00000011672) #22	ENSSTOG00000032451	SGK2 (ENSSTOG00000010133) #24	IFT52 (ENSSTOG00000010141) #25	MYBL2 (ENSSTOG00000010149) #26	TOX2 (ENSSTOG00000015626) #27	OSER1 (ENSSTOG00000015641) #30	GDAP1L1 (ENSSTOG00000015647) #31	FITM2 (ENSSTOG00000029143) #32	R3HDML (ENSSTOG00000015652) #33	HNF4A (ENSSTOG00000020202) #34	TTPAL (ENSSTOG00000015677) #35	SERINC3 (ENSSTOG00000015682) #36	PKIG (ENSSTOG00000015603)	ENSSTOG00000026859	ENSSTOG00000022041
Eurasian red squirrel	MODERN SPECIES	11	PPP1R16B (ENSSVLG00005020722)	FAM83D (ENSSVLG00005020888)	DHX35 (ENSSVLG00005021003)	MAFB (ENSSVLG00005021098) #7	ENSSVLG00005021135 #8	ENSSVLG00005021179	PLCG1 (ENSSVLG00005021236) #10	ZHX3 (ENSSVLG00005021291) #11	ENSSVLG00005021327	LPIN3 (ENSSVLG00005021362) #13	EMILIN3 (ENSSVLG00005021543) #14	CHD6 (ENSSVLG00005021606) #16	ENSSVLG00005021845	PTPRT (ENSSVLG00005021914) #20	SRSF6 (ENSSVLG00005023274) #21	L3MBTL1 (ENSSVLG00005023315) #22	SGK2 (ENSSVLG00005023455) #24	IFT52 (ENSSVLG00005023587) #25	MYBL2 (ENSSVLG00005023638) #26	ENSSVLG00005023783	TOX2 (ENSSVLG00005023803) #27	JPH2 (ENSSVLG00005023915) #29	ENSSVLG00005023943 #30	GDAP1L1 (ENSSVLG00005000177) #31	ENSSVLG00005000194 #32	R3HDML (ENSSVLG00005000214) #33	HNF4A (ENSSVLG00005000321) #34	TTPAL (ENSSVLG00005000418) #35	SERINC3 (ENSSVLG00005000443) #36	PKIG (ENSSVLG00005000482)	ADA (ENSSVLG00005000518)
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Muroidea	ANCESTRAL SPECIES	7	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000173505	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Northern American deer mouse	MODERN SPECIES	17	Arhgap40 (ENSPEMG00000023140)	Slc32a1 (ENSPEMG00000022903)	Actr5 (ENSPEMG00000023330)	Ppp1r16b (ENSPEMG00000024132)	Fam83d (ENSPEMG00000022585)	Dhx35 (ENSPEMG00000021828)	Mafb (ENSPEMG00000008568) #7	ENSPEMG00000021455 #8	Plcg1 (ENSPEMG00000022549) #10	Zhx3 (ENSPEMG00000023853) #11	Lpin3 (ENSPEMG00000021716) #13	Emilin3 (ENSPEMG00000021106) #14	Chd6 (ENSPEMG00000014672) #16	Ptprt (ENSPEMG00000021967) #20	Srsf6 (ENSPEMG00000022405) #21	L3mbtl1 (ENSPEMG00000023237) #22	Sgk2 (ENSPEMG00000021344) #24	Ift52 (ENSPEMG00000010390) #25	Mybl2 (ENSPEMG00000020831) #26	Tox2 (ENSPEMG00000020910) #27	Jph2 (ENSPEMG00000015248) #29	ENSPEMG00000030946 #29	Oser1 (ENSPEMG00000001627) #30	Gdap1l1 (ENSPEMG00000016615) #31	Fitm2 (ENSPEMG00000024662) #32	R3hdml (ENSPEMG00000000323) #33	Hnf4a (ENSPEMG00000013465) #34	Ttpal (ENSPEMG00000025276) #35	Serinc3 (ENSPEMG00000016444) #36	ENSPEMG00000026980	Pkig (ENSPEMG00000029476)
Prairie vole	MODERN SPECIES	357	Slc32a1 (ENSMOCG00000007961)	Actr5 (ENSMOCG00000020039)	Ppp1r16b (ENSMOCG00000014512)	Fam83d (ENSMOCG00000004363)	Dhx35 (ENSMOCG00000007520)	Mafb (ENSMOCG00000001028) #7	Top1 (ENSMOCG00000006200) #8	Plcg1 (ENSMOCG00000017403) #10	Zhx3 (ENSMOCG00000022689) #11	Lpin3 (ENSMOCG00000003499) #13	Emilin3 (ENSMOCG00000007610) #14	ENSMOCG00000014004 #16	Ptprt (ENSMOCG00000003318) #20	ENSMOCG00000022050	Srsf6 (ENSMOCG00000018738) #21	L3mbtl1 (ENSMOCG00000012471) #22	Sgk2 (ENSMOCG00000003167) #24	Ift52 (ENSMOCG00000017177) #25	Mybl2 (ENSMOCG00000014302) #26	Gtsf1l (ENSMOCG00000008147)	Tox2 (ENSMOCG00000014606) #27	Jph2 (ENSMOCG00000020556) #29	Oser1 (ENSMOCG00000019309) #30	Gdap1l1 (ENSMOCG00000020945) #31	Fitm2 (ENSMOCG00000019850) #32	R3hdml (ENSMOCG00000017250) #33	Hnf4a (ENSMOCG00000012352) #34	Ttpal (ENSMOCG00000019949) #35	Serinc3 (ENSMOCG00000017294) #36	Pkig (ENSMOCG00000016494)	Ada (ENSMOCG00000018474)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Golden Hamster	MODERN SPECIES	750	Arhgap40 (ENSMAUG00000016127)	Slc32a1 (ENSMAUG00000014196)	Actr5 (ENSMAUG00000020782)	Dhx35 (ENSMAUG00000004742)	ENSMAUG00000001652	ENSMAUG00000011772 #18	Mafb (ENSMAUG00000017094) #7	Top1 (ENSMAUG00000011381) #8	Plcg1 (ENSMAUG00000001300) #10	Zhx3 (ENSMAUG00000005300) #11	Lpin3 (ENSMAUG00000018443) #13	Emilin3 (ENSMAUG00000012182) #14	Chd6 (ENSMAUG00000010853) #16	Ptprt (ENSMAUG00000008400) #20	ENSMAUG00000007905 #20	L3mbtl1 (ENSMAUG00000010166) #22	Ift52 (ENSMAUG00000008508) #25
Chinese hamster chok1gshd	MODERN SPECIES	195	Fam83d (ENSCGRG00001004084)	Dhx35 (ENSCGRG00001006986)	ENSCGRG00001010012	ENSCGRG00001010285	Mafb (ENSCGRG00001005706) #7	ENSCGRG00001011343	Top1 (ENSCGRG00001013671) #8	Plcg1 (ENSCGRG00001016111) #10	Zhx3 (ENSCGRG00001017698) #11	Lpin3 (ENSCGRG00001019441) #13	Emilin3 (ENSCGRG00001000054) #14	Chd6 (ENSCGRG00001002694) #16	ENSCGRG00001006312	Ptprt (ENSCGRG00001017230) #20	Srsf6 (ENSCGRG00001022339) #21	L3mbtl1 (ENSCGRG00001000123) #22	Sgk2 (ENSCGRG00001003406) #24	Ift52 (ENSCGRG00001007196) #25	Mybl2 (ENSCGRG00001009694) #26	Gtsf1l (ENSCGRG00001016445)	Tox2 (ENSCGRG00001012970) #27	Jph2 (ENSCGRG00001011605) #29	Oser1 (ENSCGRG00001012353) #30	Gdap1l1 (ENSCGRG00001013351) #31	Fitm2 (ENSCGRG00001014275) #32	R3hdml (ENSCGRG00001014738) #33	Hnf4a (ENSCGRG00001015386) #34	Ttpal (ENSCGRG00001016765) #35	Serinc3 (ENSCGRG00001017646) #36	Pkig (ENSCGRG00001018681)	Ada (ENSCGRG00001019279)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Mus	ANCESTRAL SPECIES	1	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00900000143361	ENSGT00940000160486 #7	ENSGT00900000143312	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Mus_A	ANCESTRAL SPECIES		ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00900000143361	ENSGT00940000160486 #7	ENSGT00900000143312	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707.j	ENSGT00950000183113.a.b
Mus_B	ANCESTRAL SPECIES	1	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00900000143361	ENSGT00940000160486 #7	ENSGT00900000143312	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707.j	ENSGT00950000183113.a.b
Mus_C	ANCESTRAL SPECIES		ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00900000143361	ENSGT00940000160486 #7	ENSGT00900000143312	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707.j	ENSGT00950000183113.a.b
Steppe mouse	MODERN SPECIES	3221												ENSMSIG00000028332	Ptprt (ENSMSIG00000028367) #20	ENSMSIG00000028481	Srsf6 (ENSMSIG00000028489) #21	L3mbtl1 (ENSMSIG00000028502) #22	Sgk2 (ENSMSIG00000028516) #24	Ift52 (ENSMSIG00000028523) #25	Mybl2 (ENSMSIG00000028529) #26	Gtsf1l (ENSMSIG00000028544)	Tox2 (ENSMSIG00000028549) #27	Jph2 (ENSMSIG00000028560) #29	Oser1 (ENSMSIG00000028563) #30	Gdap1l1 (ENSMSIG00000028567) #31	Fitm2 (ENSMSIG00000028577) #32	R3hdml (ENSMSIG00000028582) #33	ENSMSIG00000028588	Hnf4a (ENSMSIG00000028595) #34	Ttpal (ENSMSIG00000028603) #35	Serinc3 (ENSMSIG00000028608) #36	ENSMSIG00000028612
spretus	MODERN SPECIES	11	Actr5 (MGP_SPRETEiJ_G0025514)	Ppp1r16b (MGP_SPRETEiJ_G0025515)	Fam83d (MGP_SPRETEiJ_G0025516)	Dhx35 (MGP_SPRETEiJ_G0025517)	MGP_SPRETEiJ_G0025518	Mafb (MGP_SPRETEiJ_G0025519) #7	MGP_SPRETEiJ_G0025520	Top1 (MGP_SPRETEiJ_G0025521) #8	Plcg1 (MGP_SPRETEiJ_G0025522) #10	Zhx3 (MGP_SPRETEiJ_G0025523) #11	Lpin3 (MGP_SPRETEiJ_G0025524) #13	Emilin3 (MGP_SPRETEiJ_G0025525) #14	Chd6 (MGP_SPRETEiJ_G0025526) #16	Ptprt (MGP_SPRETEiJ_G0025527) #20	Srsf6 (MGP_SPRETEiJ_G0025528) #21	L3mbtl1 (MGP_SPRETEiJ_G0025529) #22	Sgk2 (MGP_SPRETEiJ_G0025530) #24	Ift52 (MGP_SPRETEiJ_G0025531) #25	Mybl2 (MGP_SPRETEiJ_G0025532) #26	Gtsf1l (MGP_SPRETEiJ_G0025533)	Tox2 (MGP_SPRETEiJ_G0025534) #27	Jph2 (MGP_SPRETEiJ_G0025535) #29	Oser1 (MGP_SPRETEiJ_G0025536) #30	Gdap1l1 (MGP_SPRETEiJ_G0025537) #31	Fitm2 (MGP_SPRETEiJ_G0025538) #32	R3hdml (MGP_SPRETEiJ_G0025539) #33	Hnf4a (MGP_SPRETEiJ_G0025540) #34	Ttpal (MGP_SPRETEiJ_G0025541) #35	Serinc3 (MGP_SPRETEiJ_G0025542) #36	Pkig (MGP_SPRETEiJ_G0025543)	Ada (MGP_SPRETEiJ_G0025544)
Mouse	MODERN SPECIES	11	Slc32a1 (ENSMUSG00000037771)	Actr5 (ENSMUSG00000037761)	Ppp1r16b (ENSMUSG00000037754)	Fam83d (ENSMUSG00000027654)	Dhx35 (ENSMUSG00000027655)	Gm826 (ENSMUSG00000074623)	Mafb (ENSMUSG00000074622) #7	Top1 (ENSMUSG00000070544) #8	Plcg1 (ENSMUSG00000016933) #10	Zhx3 (ENSMUSG00000035877) #11	Lpin3 (ENSMUSG00000027412) #13	Emilin3 (ENSMUSG00000050700) #14	Chd6 (ENSMUSG00000057133) #16	Ptprt (ENSMUSG00000053141) #20	Srsf6 (ENSMUSG00000016921) #21	L3mbtl1 (ENSMUSG00000035576) #22	Sgk2 (ENSMUSG00000017868) #24	Ift52 (ENSMUSG00000017858) #25	Mybl2 (ENSMUSG00000017861) #26	Gtsf1l (ENSMUSG00000070708)	Tox2 (ENSMUSG00000074607) #27	Jph2 (ENSMUSG00000017817) #29	Oser1 (ENSMUSG00000035399) #30	Gdap1l1 (ENSMUSG00000017943) #31	Fitm2 (ENSMUSG00000048486) #32	R3hdml (ENSMUSG00000078949) #33	Hnf4a (ENSMUSG00000017950) #34	Ttpal (ENSMUSG00000017679) #35	Serinc3 (ENSMUSG00000017707) #36	Pkig (ENSMUSG00000035268)	Ada (ENSMUSG00000017697)
Ryukyu mouse	MODERN SPECIES	11	Actr5 (MGP_CAROLIEiJ_G0024592)	Ppp1r16b (MGP_CAROLIEiJ_G0024593)	Fam83d (MGP_CAROLIEiJ_G0024594)	Dhx35 (MGP_CAROLIEiJ_G0024595)	MGP_CAROLIEiJ_G0024596	Mafb (MGP_CAROLIEiJ_G0024597) #7	MGP_CAROLIEiJ_G0024598	MGP_CAROLIEiJ_G0024599 #8	Plcg1 (MGP_CAROLIEiJ_G0024600) #10	Zhx3 (MGP_CAROLIEiJ_G0024601) #11	Lpin3 (MGP_CAROLIEiJ_G0024602) #13	Emilin3 (MGP_CAROLIEiJ_G0024603) #14	Chd6 (MGP_CAROLIEiJ_G0024604) #16	Ptprt (MGP_CAROLIEiJ_G0024605) #20	Srsf6 (MGP_CAROLIEiJ_G0024606) #21	L3mbtl1 (MGP_CAROLIEiJ_G0024607) #22	Sgk2 (MGP_CAROLIEiJ_G0024608) #24	Ift52 (MGP_CAROLIEiJ_G0024609) #25	Mybl2 (MGP_CAROLIEiJ_G0024610) #26	Gtsf1l (MGP_CAROLIEiJ_G0024611)	Tox2 (MGP_CAROLIEiJ_G0024612) #27	Jph2 (MGP_CAROLIEiJ_G0024613) #29	Oser1 (MGP_CAROLIEiJ_G0024614) #30	Gdap1l1 (MGP_CAROLIEiJ_G0024615) #31	Fitm2 (MGP_CAROLIEiJ_G0024616) #32	R3hdml (MGP_CAROLIEiJ_G0024617) #33	Hnf4a (MGP_CAROLIEiJ_G0024618) #34	Ttpal (MGP_CAROLIEiJ_G0024619) #35	Serinc3 (MGP_CAROLIEiJ_G0024620) #36	Pkig (MGP_CAROLIEiJ_G0024621)	Ada (MGP_CAROLIEiJ_G0024622)
Rat	MODERN SPECIES	13	Actr5 (ENSRNOG00000023989)	Ppp1r16b (ENSRNOG00000015614)	LOC120101775 (ENSRNOG00000029227)	Fam83d (ENSRNOG00000015794)	Dhx35 (ENSRNOG00000015928)	Mafb (ENSRNOG00000016037) #7	ENSRNOG00000066616	Top1 (ENSRNOG00000047611) #8	Plcg1 (ENSRNOG00000051490) #10	Zhx3 (ENSRNOG00000027988) #11	Lpin3 (ENSRNOG00000016636) #13	Emilin3 (ENSRNOG00000016734) #14	Chd6 (ENSRNOG00000016744) #16	Ptprt (ENSRNOG00000032656) #20	Srsf6 (ENSRNOG00000006380) #21	L3mbtl1 (ENSRNOG00000007044) #22	Sgk2 (ENSRNOG00000033573) #24	Ift52 (ENSRNOG00000007692) #25	Mybl2 (ENSRNOG00000007805) #26	Gtsf1l (ENSRNOG00000069924)	Tox2 (ENSRNOG00000008146) #27	Jph2 (ENSRNOG00000008170) #29	Oser1 (ENSRNOG00000008297) #30	Gdap1l1 (ENSRNOG00000008790) #31	Fitm2 (ENSRNOG00000027434) #32	R3hdml (ENSRNOG00000027432) #33	Hnf4a (ENSRNOG00000008895) #34	Ttpal (ENSRNOG00000009076) #35	Serinc3 (ENSRNOG00000009552) #36	Pkig (ENSRNOG00000010235)	Ada (ENSRNOG00000010265)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1562									Lpin3 (ENSNGAG00000004303) #13	Emilin3 (ENSNGAG00000014260) #14	ENSNGAG00000017135 #15	ENSNGAG00000022407 #16	ENSNGAG00000015000	Ptprt (ENSNGAG00000004548) #20	Srsf6 (ENSNGAG00000017560) #21	L3mbtl1 (ENSNGAG00000022836) #22	Sgk2 (ENSNGAG00000012315) #24	Ift52 (ENSNGAG00000020728) #25	Mybl2 (ENSNGAG00000018616) #26	Tox2 (ENSNGAG00000006494) #27	Jph2 (ENSNGAG00000010483) #29	Oser1 (ENSNGAG00000023794) #30	Gdap1l1 (ENSNGAG00000023949) #31	Fitm2 (ENSNGAG00000011059) #32	R3hdml (ENSNGAG00000022018) #33	Hnf4a (ENSNGAG00000022956) #34	Ttpal (ENSNGAG00000013915) #35	Serinc3 (ENSNGAG00000019311) #36	Pkig (ENSNGAG00000020610)	Ada (ENSNGAG00000023330)	Ccn5 (ENSNGAG00000021442)
Lesser Egyptian jerboa	MODERN SPECIES	169				Mafb (ENSJJAG00000012856) #7	Top1 (ENSJJAG00000013666) #8	ENSJJAG00000016330	Plcg1 (ENSJJAG00000018639) #10	Zhx3 (ENSJJAG00000021855) #11	Lpin3 (ENSJJAG00000007953) #13	Emilin3 (ENSJJAG00000000426) #14	ENSJJAG00000010052 #15	ENSJJAG00000012191 #16	Ptprt (ENSJJAG00000009876) #20	Srsf6 (ENSJJAG00000020690) #21	ENSJJAG00000020830	L3mbtl1 (ENSJJAG00000021376) #22	Sgk2 (ENSJJAG00000010028) #24	Ift52 (ENSJJAG00000010491) #25	Mybl2 (ENSJJAG00000012069) #26	Tox2 (ENSJJAG00000016389) #27	Jph2 (ENSJJAG00000005442) #29	Oser1 (ENSJJAG00000011317) #30	Gdap1l1 (ENSJJAG00000013580) #31	Fitm2 (ENSJJAG00000014512) #32	R3hdml (ENSJJAG00000016733) #33	Hnf4a (ENSJJAG00000020210) #34	Ttpal (ENSJJAG00000020474) #35	ENSJJAG00000022211 #36	ENSJJAG00000022491	Ada (ENSJJAG00000005078)	Ccn5 (ENSJJAG00000011297)
Kangaroo rat	MODERN SPECIES	332	Slc32a1 (ENSDORG00000009178)	Actr5 (ENSDORG00000009179)	Ppp1r16b (ENSDORG00000010645)	Fam83d (ENSDORG00000010647)	Dhx35 (ENSDORG00000005573)	Mafb (ENSDORG00000016730) #7	Top1 (ENSDORG00000012118) #8	Plcg1 (ENSDORG00000012133) #10	Zhx3 (ENSDORG00000012139) #11	Lpin3 (ENSDORG00000010870) #13	Emilin3 (ENSDORG00000010874) #14	ENSDORG00000026018 #15	ENSDORG00000025941 #16	Ptprt (ENSDORG00000016079) #20	Srsf6 (ENSDORG00000028378) #21	L3mbtl1 (ENSDORG00000002707) #22	Sgk2 (ENSDORG00000025286) #24	Ift52 (ENSDORG00000011592) #25	Mybl2 (ENSDORG00000006855) #26	Tox2 (ENSDORG00000013714) #27	Oser1 (ENSDORG00000027077) #30	Gdap1l1 (ENSDORG00000008323) #31	Fitm2 (ENSDORG00000025483) #32	R3hdml (ENSDORG00000026101) #33	Hnf4a (ENSDORG00000005971) #34	Ttpal (ENSDORG00000004956) #35	Serinc3 (ENSDORG00000004957) #36	Pkig (ENSDORG00000026731)	Ada (ENSDORG00000004804)	Ccn5 (ENSDORG00000005480)	Kcnk15 (ENSDORG00000012778)
Lagomorpha	ANCESTRAL SPECIES	38							ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b	ENSGT00940000160207
Pika	MODERN SPECIES	4089																L3MBTL1 (ENSOPRG00000002367) #22
Rabbit	MODERN SPECIES	451				MAFB (ENSOCUG00000021619) #7	TOP1 (ENSOCUG00000008221) #8	PLCG1 (ENSOCUG00000008231) #10	ZHX3 (ENSOCUG00000006439) #11	LPIN3 (ENSOCUG00000012372) #13	EMILIN3 (ENSOCUG00000012388) #14	CHD6 (ENSOCUG00000012394) #16	ENSOCUG00000023760	ENSOCUG00000025431	ENSOCUG00000035704	PTPRT (ENSOCUG00000001573) #20	SRSF6 (ENSOCUG00000009785) #21	L3MBTL1 (ENSOCUG00000006662) #22	IFT52 (ENSOCUG00000006672) #25	MYBL2 (ENSOCUG00000005775) #26	TOX2 (ENSOCUG00000008497) #27	ENSOCUG00000026221 #29	OSER1 (ENSOCUG00000004094) #30	GDAP1L1 (ENSOCUG00000004099) #31	FITM2 (ENSOCUG00000004110) #32	R3HDML (ENSOCUG00000000330) #33	HNF4A (ENSOCUG00000006841) #34	TTPAL (ENSOCUG00000004260) #35	SERINC3 (ENSOCUG00000004265) #36	ENSOCUG00000010103	ADA (ENSOCUG00000010107)	ENSOCUG00000026368
Tree shrew	MODERN SPECIES	1051															SRSF6 (ENSTBEG00000013448) #21	L3MBTL1 (ENSTBEG00000014200) #22	SGK2 (ENSTBEG00000014653) #24	IFT52 (ENSTBEG00000015627) #25
Primates	ANCESTRAL SPECIES	17	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581.k #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Lemuriformes	ANCESTRAL SPECIES	10	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581.k.a #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Mouse lemur	MODERN SPECIES	9	ACTR5 (ENSMICG00000013239)	PPP1R16B (ENSMICG00000013256)	FAM83D (ENSMICG00000037041)	DHX35 (ENSMICG00000013282)	MAFB (ENSMICG00000007079) #7	TOP1 (ENSMICG00000007082) #8	PLCG1 (ENSMICG00000007095) #10	ZHX3 (ENSMICG00000007116) #11	LPIN3 (ENSMICG00000016603) #13	EMILIN3 (ENSMICG00000016636) #14	CHD6 (ENSMICG00000016641) #16	ENSMICG00000032300	PTPRT (ENSMICG00000008488) #20	ENSMICG00000034044	SRSF6 (ENSMICG00000008537) #21	L3MBTL1 (ENSMICG00000015115) #22	SGK2 (ENSMICG00000015157) #24	ENSMICG00000015182 #25	MYBL2 (ENSMICG00000000330) #26	GTSF1L (ENSMICG00000031457)	TOX2 (ENSMICG00000008209) #27	JPH2 (ENSMICG00000008215) #29	OSER1 (ENSMICG00000036505) #30	GDAP1L1 (ENSMICG00000008227) #31	FITM2 (ENSMICG00000044829) #32	R3HDML (ENSMICG00000008238) #33	HNF4A (ENSMICG00000008240) #34	TTPAL (ENSMICG00000008264) #35	ENSMICG00000008272 #36	ENSMICG00000003716	PKIG (ENSMICG00000044432)
Lemuriformes_a	ANCESTRAL SPECIES	121															ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581.k.a #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a.s #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Greater bamboo lemur	MODERN SPECIES	102															SRSF6 (ENSPSMG00000000397) #21	L3MBTL1 (ENSPSMG00000000377) #22	SGK2 (ENSPSMG00000000288) #24	ENSPSMG00000000264 #25	MYBL2 (ENSPSMG00000000214) #26	GTSF1L (ENSPSMG00000000146)	TOX2 (ENSPSMG00000000131) #27	JPH2 (ENSPSMG00000000029) #29
Coquerels sifaka	MODERN SPECIES	492		NUP35 (ENSPCOG00000024097)	DUSP19 (ENSPCOG00000008687)	NCKAP1 (ENSPCOG00000006055)	FRZB (ENSPCOG00000015628)	ENSPCOG00000000368	DNAJC10 (ENSPCOG00000016951)	PDE1A (ENSPCOG00000005906)	PPP1R1C (ENSPCOG00000027920)	ITPRID2 (ENSPCOG00000019219)	NEUROD1 (ENSPCOG00000013346)	CERKL (ENSPCOG00000019287)	ITGA4 (ENSPCOG00000005136)	UBE2E3 (ENSPCOG00000022519)	SRSF6 (ENSPCOG00000026364) #21	L3MBTL1 (ENSPCOG00000027177) #22	SGK2 (ENSPCOG00000021916) #24	ENSPCOG00000017065 #25	MYBL2 (ENSPCOG00000028607) #26	GTSF1L (ENSPCOG00000013630)	TOX2 (ENSPCOG00000023718) #27	JPH2 (ENSPCOG00000023713) #29	OSER1 (ENSPCOG00000017403) #30	AMD1 (ENSPCOG00000025049)	CDK19 (ENSPCOG00000027559)	SLC22A16 (ENSPCOG00000015137)	DDO (ENSPCOG00000003716)	METTL24 (ENSPCOG00000020108)	CDC40 (ENSPCOG00000015486)	WASF1 (ENSPCOG00000011518)	GPR6 (ENSPCOG00000023300)
Bushbaby	MODERN SPECIES	138	ARHGAP40 (ENSOGAG00000031066)	SLC32A1 (ENSOGAG00000033907)	ACTR5 (ENSOGAG00000000948)	PPP1R16B (ENSOGAG00000000950)	FAM83D (ENSOGAG00000000951)	DHX35 (ENSOGAG00000000954)	MAFB (ENSOGAG00000030499) #7	TOP1 (ENSOGAG00000008442) #8	PLCG1 (ENSOGAG00000013346) #10	ZHX3 (ENSOGAG00000013363) #11	LPIN3 (ENSOGAG00000002422) #13	EMILIN3 (ENSOGAG00000002424) #14	CHD6 (ENSOGAG00000002427) #16	PTPRT (ENSOGAG00000014459) #20	SRSF6 (ENSOGAG00000014468) #21	L3MBTL1 (ENSOGAG00000014470) #22	SGK2 (ENSOGAG00000007695) #24	IFT52 (ENSOGAG00000007699) #25	MYBL2 (ENSOGAG00000007702) #26	GTSF1L (ENSOGAG00000007706)	TOX2 (ENSOGAG00000007709) #27	JPH2 (ENSOGAG00000034656) #29	OSER1 (ENSOGAG00000007711) #30	GDAP1L1 (ENSOGAG00000007713) #31	FITM2 (ENSOGAG00000013417) #32	R3HDML (ENSOGAG00000031807) #33	HNF4A (ENSOGAG00000029426) #34	TTPAL (ENSOGAG00000016084) #35	SERINC3 (ENSOGAG00000028171) #36	PKIG (ENSOGAG00000030592)	ADA (ENSOGAG00000016280)
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Tarsier	MODERN SPECIES	1199															SRSF6 (ENSTSYG00000026476) #21	L3MBTL1 (ENSTSYG00000014180) #22
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b.d #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000154399.a.b.j	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b	ENSGT00940000160207
Mas night monkey	MODERN SPECIES	1347												ENSANAG00000028228 #20	ENSANAG00000038208	SRSF6 (ENSANAG00000024080) #21	ENSANAG00000037452	L3MBTL1 (ENSANAG00000024911) #22	SGK2 (ENSANAG00000023047) #24	IFT52 (ENSANAG00000033121) #25	MYBL2 (ENSANAG00000017050) #26	GTSF1L (ENSANAG00000037122)	ENSANAG00000000051	TOX2 (ENSANAG00000038272) #27	JPH2 (ENSANAG00000035538) #29	OSER1 (ENSANAG00000022987) #30	GDAP1L1 (ENSANAG00000031172) #31	FITM2 (ENSANAG00000024387) #32	HNF4A (ENSANAG00000023826) #34	TTPAL (ENSANAG00000038323) #35	SERINC3 (ENSANAG00000036283) #36	ADA (ENSANAG00000027881)	PKIG (ENSANAG00000017948)
Cebidae	ANCESTRAL SPECIES	13	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b.d #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000154399.a.b.j	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b	ENSGT00940000160207
Marmoset	MODERN SPECIES	17	ADIG (ENSCJAG00000041176)	ARHGAP40 (ENSCJAG00000011443)	SLC32A1 (ENSCJAG00000066263)	ACTR5 (ENSCJAG00000011470)	PPP1R16B (ENSCJAG00000011490)	DHX35 (ENSCJAG00000011495)	TOP1 (ENSCJAG00000018101) #8	PLCG1 (ENSCJAG00000018013) #10	ZHX3 (ENSCJAG00000018012) #11	LPIN3 (ENSCJAG00000017986) #13	EMILIN3 (ENSCJAG00000081544) #14	CHD6 (ENSCJAG00000017920) #16	PTPRT (ENSCJAG00000017913) #20	SRSF6 (ENSCJAG00000067472) #21	ENSCJAG00000046459	L3MBTL1 (ENSCJAG00000003964) #22	SGK2 (ENSCJAG00000017869) #24	IFT52 (ENSCJAG00000017838) #25	ENSCJAG00000076696	MYBL2 (ENSCJAG00000017819) #26	TOX2 (ENSCJAG00000017806) #27	OSER1 (ENSCJAG00000017794) #30	JPH2 (ENSCJAG00000017802) #29	ENSCJAG00000072121	GDAP1L1 (ENSCJAG00000017789) #31	FITM2 (ENSCJAG00000017787) #32	ENSCJAG00000055291	HNF4A (ENSCJAG00000017746) #34	TTPAL (ENSCJAG00000017736) #35	SERINC3 (ENSCJAG00000017722) #36	ENSCJAG00000086429
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b.d #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000154399.a.b.j	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b	ENSGT00940000160207
Capuchin	MODERN SPECIES	141														PTPRT (ENSCCAG00000021139) #20	SRSF6 (ENSCCAG00000026018) #21	L3MBTL1 (ENSCCAG00000034693) #22	ENSCCAG00000030016	IFT52 (ENSCCAG00000022647) #25	MYBL2 (ENSCCAG00000026045) #26	GTSF1L (ENSCCAG00000023964)	ENSCCAG00000028405	WDR17 (ENSCCAG00000034146)	SPATA4 (ENSCCAG00000007967)	ASB5 (ENSCCAG00000022034)	ENSCCAG00000014046	VEGFC (ENSCCAG00000022899)	ENSCCAG00000005362	NEIL3 (ENSCCAG00000018838)	AGA (ENSCCAG00000013622)	ENSCCAG00000032205	ENSCCAG00000026845
Bolivian squirrel monkey	MODERN SPECIES	126	ACTR5 (ENSSBOG00000025102)	PPP1R16B (ENSSBOG00000032189)	FAM83D (ENSSBOG00000026252)	DHX35 (ENSSBOG00000029157)	MAFB (ENSSBOG00000019882) #7	TOP1 (ENSSBOG00000028591) #8	PLCG1 (ENSSBOG00000028216) #10	ZHX3 (ENSSBOG00000015359) #11	LPIN3 (ENSSBOG00000029382) #13	EMILIN3 (ENSSBOG00000035273) #14	ENSSBOG00000035558	CHD6 (ENSSBOG00000022089) #16	PTPRT (ENSSBOG00000028466) #20	ENSSBOG00000033708 #21	ENSSBOG00000025682	L3MBTL1 (ENSSBOG00000033395) #22	SGK2 (ENSSBOG00000007475) #24	IFT52 (ENSSBOG00000023314) #25	MYBL2 (ENSSBOG00000030823) #26	GTSF1L (ENSSBOG00000033121)	ENSSBOG00000024901	ENSSBOG00000012043	TOX2 (ENSSBOG00000024054) #27	ENSSBOG00000019105 #29	ENSSBOG00000023742 #30	GDAP1L1 (ENSSBOG00000030352) #31	FITM2 (ENSSBOG00000019193) #32	HNF4A (ENSSBOG00000035054) #34	ENSSBOG00000025294	ENSSBOG00000025754	TTPAL (ENSSBOG00000030193) #35
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00390000007838.o.b	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00390000005534.b.b.c.b.b.b	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00940000155407 #35
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00950000183087.A.a.b.a.g.a.b	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00390000005534.b.b.c.b.b.b	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36
Hominidae	ANCESTRAL SPECIES	18	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00950000183087.A.a.b.a.g.a.b	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00390000005534.b.b.c.b.b.b	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00390000007838.o.b	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448.n #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00390000005534.b.b.c.b.b.b	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00390000007838.o.b	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448.n #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00390000005534.b.b.c.b.b.b	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707
Pan	ANCESTRAL SPECIES	15	ENSGT00390000007838.o.b	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448.n #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00390000005534.b.b.c.b.b.b	ENSGT00940000156091.b #26	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36
Chimpanzee	MODERN SPECIES	11	SLC32A1 (ENSPTRG00000013492)	ACTR5 (ENSPTRG00000013493)	PPP1R16B (ENSPTRG00000038644)	FAM83D (ENSPTRG00000013495)	DHX35 (ENSPTRG00000013497)	MAFB (ENSPTRG00000030557) #7	TOP1 (ENSPTRG00000013498) #8	PLCG1 (ENSPTRG00000013500) #10	ZHX3 (ENSPTRG00000013501) #11	LPIN3 (ENSPTRG00000013502) #13	EMILIN3 (ENSPTRG00000013503) #14	CHD6 (ENSPTRG00000013504) #16	ENSPTRG00000052725	PTPRT (ENSPTRG00000013505) #20	SRSF6 (ENSPTRG00000044686) #21	L3MBTL1 (ENSPTRG00000013507) #22	SGK2 (ENSPTRG00000013508) #24	IFT52 (ENSPTRG00000013509) #25	ENSPTRG00000047751	MYBL2 (ENSPTRG00000013510) #26	TOX2 (ENSPTRG00000013512) #27	JPH2 (ENSPTRG00000047332) #29	OSER1 (ENSPTRG00000013514) #30	GDAP1L1 (ENSPTRG00000013515) #31	FITM2 (ENSPTRG00000013516) #32	R3HDML (ENSPTRG00000013517) #33	HNF4A (ENSPTRG00000013519) #34	ENSPTRG00000030548	ENSPTRG00000043551	TTPAL (ENSPTRG00000050927) #35	SERINC3 (ENSPTRG00000013522) #36
Bonobo	MODERN SPECIES	11	SLC32A1 (ENSPPAG00000038157)	ACTR5 (ENSPPAG00000006443)	PPP1R16B (ENSPPAG00000027501)	FAM83D (ENSPPAG00000035388)	DHX35 (ENSPPAG00000038372)	MAFB (ENSPPAG00000021479) #7	TOP1 (ENSPPAG00000043186) #8	PLCG1 (ENSPPAG00000031824) #10	ZHX3 (ENSPPAG00000025392) #11	LPIN3 (ENSPPAG00000040753) #13	EMILIN3 (ENSPPAG00000037394) #14	CHD6 (ENSPPAG00000043530) #16	ENSPPAG00000023973	PTPRT (ENSPPAG00000035951) #20	SRSF6 (ENSPPAG00000034327) #21	L3MBTL1 (ENSPPAG00000035008) #22	SGK2 (ENSPPAG00000031264) #24	IFT52 (ENSPPAG00000035443) #25	ENSPPAG00000036972	MYBL2 (ENSPPAG00000041165) #26	TOX2 (ENSPPAG00000028482) #27	ENSPPAG00000030067 #29	OSER1 (ENSPPAG00000030420) #30	GDAP1L1 (ENSPPAG00000032416) #31	FITM2 (ENSPPAG00000035906) #32	R3HDML (ENSPPAG00000036842) #33	HNF4A (ENSPPAG00000037962) #34	ENSPPAG00000027142	ENSPPAG00000027725	TTPAL (ENSPPAG00000031237) #35	SERINC3 (ENSPPAG00000033610) #36
Human	MODERN SPECIES	12	SLC32A1 (ENSG00000101438)	ACTR5 (ENSG00000101442)	PPP1R16B (ENSG00000101445)	FAM83D (ENSG00000101447)	DHX35 (ENSG00000101452)	MAFB (ENSG00000204103) #7	TOP1 (ENSG00000198900) #8	PLCG1 (ENSG00000124181) #10	ZHX3 (ENSG00000174306) #11	LPIN3 (ENSG00000132793) #13	EMILIN3 (ENSG00000183798) #14	CHD6 (ENSG00000124177) #16	PTPRT (ENSG00000196090) #20	SRSF6 (ENSG00000124193) #21	ENSG00000288000	L3MBTL1 (ENSG00000185513) #22	SGK2 (ENSG00000101049) #24	IFT52 (ENSG00000101052) #25	MYBL2 (ENSG00000101057) #26	GTSF1L (ENSG00000124196)	TOX2 (ENSG00000124191) #27	JPH2 (ENSG00000149596) #29	OSER1 (ENSG00000132823) #30	GDAP1L1 (ENSG00000124194) #31	FITM2 (ENSG00000197296) #32	R3HDML (ENSG00000101074) #33	HNF4A (ENSG00000101076) #34	TTPAL (ENSG00000124120) #35	SERINC3 (ENSG00000132824) #36	PKIG (ENSG00000168734)	ADA (ENSG00000196839)
Gorilla	MODERN SPECIES	11	ARHGAP40 (ENSGGOG00000004403)	SLC32A1 (ENSGGOG00000011108)	PPP1R16B (ENSGGOG00000015667)	FAM83D (ENSGGOG00000015675)	DHX35 (ENSGGOG00000013960)	MAFB (ENSGGOG00000001226) #7	TOP1 (ENSGGOG00000009000) #8	ENSGGOG00000040836	PLCG1 (ENSGGOG00000007808) #10	ZHX3 (ENSGGOG00000008691) #11	LPIN3 (ENSGGOG00000013110) #13	EMILIN3 (ENSGGOG00000013121) #14	CHD6 (ENSGGOG00000013123) #16	PTPRT (ENSGGOG00000034859) #20	SRSF6 (ENSGGOG00000009808) #21	L3MBTL1 (ENSGGOG00000034980) #22	SGK2 (ENSGGOG00000004338) #24	IFT52 (ENSGGOG00000016151) #25	ENSGGOG00000041895	ENSGGOG00000004126	MYBL2 (ENSGGOG00000014308) #26	TOX2 (ENSGGOG00000008062) #27	JPH2 (ENSGGOG00000006697) #29	OSER1 (ENSGGOG00000022998) #30	GDAP1L1 (ENSGGOG00000003331) #31	FITM2 (ENSGGOG00000040129) #32	R3HDML (ENSGGOG00000005395) #33	HNF4A (ENSGGOG00000006988) #34	TTPAL (ENSGGOG00000004790) #35	ENSGGOG00000014200	ENSGGOG00000025831
Orangutan	MODERN SPECIES	11	SLC32A1 (ENSPPYG00000011003)	ACTR5 (ENSPPYG00000011004)	PPP1R16B (ENSPPYG00000011005)	FAM83D (ENSPPYG00000011006)	DHX35 (ENSPPYG00000011007)	MAFB (ENSPPYG00000011008) #7	TOP1 (ENSPPYG00000011009) #8	PLCG1 (ENSPPYG00000011011) #10	ZHX3 (ENSPPYG00000011012) #11	LPIN3 (ENSPPYG00000011013) #13	EMILIN3 (ENSPPYG00000011014) #14	CHD6 (ENSPPYG00000011016) #16	PTPRT (ENSPPYG00000011018) #20	ENSPPYG00000037753	SRSF6 (ENSPPYG00000011019) #21	L3MBTL1 (ENSPPYG00000036118) #22	SGK2 (ENSPPYG00000011020) #24	IFT52 (ENSPPYG00000011021) #25	MYBL2 (ENSPPYG00000011022) #26	ENSPPYG00000034056	TOX2 (ENSPPYG00000011025) #27	JPH2 (ENSPPYG00000011026) #29	OSER1 (ENSPPYG00000011027) #30	GDAP1L1 (ENSPPYG00000011028) #31	FITM2 (ENSPPYG00000011029) #32	R3HDML (ENSPPYG00000011030) #33	HNF4A (ENSPPYG00000011031) #34	TTPAL (ENSPPYG00000011034) #35	SERINC3 (ENSPPYG00000011035) #36	PKIG (ENSPPYG00000011036)	ADA (ENSPPYG00000011038)
Gibbon	MODERN SPECIES	3	SLC32A1 (ENSNLEG00000006405)	ACTR5 (ENSNLEG00000006407)	PPP1R16B (ENSNLEG00000031518)	FAM83D (ENSNLEG00000030340)	DHX35 (ENSNLEG00000006429)	MAFB (ENSNLEG00000006460) #7	TOP1 (ENSNLEG00000006462) #8	PLCG1 (ENSNLEG00000006479) #10	ZHX3 (ENSNLEG00000006488) #11	LPIN3 (ENSNLEG00000006489) #13	CHD6 (ENSNLEG00000006496) #16	ENSNLEG00000006520 #20	ENSNLEG00000029238 #20	ENSNLEG00000035966	SRSF6 (ENSNLEG00000006524) #21	L3MBTL1 (ENSNLEG00000006529) #22	SGK2 (ENSNLEG00000006547) #24	IFT52 (ENSNLEG00000006560) #25	MYBL2 (ENSNLEG00000006566) #26	ENSNLEG00000029652	ENSNLEG00000032499 #27	TOX2 (ENSNLEG00000006576) #27	JPH2 (ENSNLEG00000006585) #29	OSER1 (ENSNLEG00000006587) #30	ENSNLEG00000029758	GDAP1L1 (ENSNLEG00000006589) #31	FITM2 (ENSNLEG00000031441) #32	R3HDML (ENSNLEG00000006593) #33	HNF4A (ENSNLEG00000006596) #34	ENSNLEG00000019223	ENSNLEG00000033988
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00910000147326	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00390000005534.b.b.c.b.b.b	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00940000155407 #35
Rhinopithecus	ANCESTRAL SPECIES	51													ENSGT00940000155326 #20	ENSGT00910000147326	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00390000005534.b.b.c.b.b.b	ENSGT00940000156091.b.a #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00940000155407 #35
Black snub-nosed monkey	MODERN SPECIES	592												PTPRT (ENSRBIG00000029467) #20	ENSRBIG00000039389 #20	ENSRBIG00000035061	SRSF6 (ENSRBIG00000041414) #21	L3MBTL1 (ENSRBIG00000033192) #22	SGK2 (ENSRBIG00000041182) #24	IFT52 (ENSRBIG00000029175) #25	ENSRBIG00000001326	ENSRBIG00000030742 #26	GTSF1L (ENSRBIG00000032329)	TOX2 (ENSRBIG00000036791) #27	JPH2 (ENSRBIG00000000057) #29	OSER1 (ENSRBIG00000029651) #30	ENSRBIG00000030094	GDAP1L1 (ENSRBIG00000039829) #31	FITM2 (ENSRBIG00000036989) #32	R3HDML (ENSRBIG00000024152) #33	HNF4A (ENSRBIG00000036273) #34	ENSRBIG00000033224	TTPAL (ENSRBIG00000029256) #35
Golden snub-nosed monkey	MODERN SPECIES	2477													ENSRROG00000043545 #20	ENSRROG00000043234	SRSF6 (ENSRROG00000029989) #21	L3MBTL1 (ENSRROG00000032023) #22	SGK2 (ENSRROG00000030967) #24	IFT52 (ENSRROG00000019072) #25	ENSRROG00000038884	ENSRROG00000031255 #26	GTSF1L (ENSRROG00000036399)	TOX2 (ENSRROG00000044451) #27	JPH2 (ENSRROG00000031793) #29	OSER1 (ENSRROG00000042991) #30	ENSRROG00000004279	GDAP1L1 (ENSRROG00000037505) #31	FITM2 (ENSRROG00000042355) #32	R3HDML (ENSRROG00000029966) #33	HNF4A (ENSRROG00000030368) #34	ENSRROG00000037299	TTPAL (ENSRROG00000030411) #35
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00910000147326	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36
Vervet Monkey	MODERN SPECIES	11	SLC32A1 (ENSCSAG00000013896)	ACTR5 (ENSCSAG00000013901)	PPP1R16B (ENSCSAG00000013907)	FAM83D (ENSCSAG00000013910)	DHX35 (ENSCSAG00000013928)	MAFB (ENSCSAG00000018753) #7	TOP1 (ENSCSAG00000013942) #8	PLCG1 (ENSCSAG00000013953) #10	ZHX3 (ENSCSAG00000013961) #11	LPIN3 (ENSCSAG00000013973) #13	EMILIN3 (ENSCSAG00000013979) #14	CHD6 (ENSCSAG00000013997) #16	ENSCSAG00000018752	PTPRT (ENSCSAG00000014014) #20	SRSF6 (ENSCSAG00000014022) #21	ENSCSAG00000014035 #22	SGK2 (ENSCSAG00000014047) #24	IFT52 (ENSCSAG00000014055) #25	MYBL2 (ENSCSAG00000014069) #26	GTSF1L (ENSCSAG00000018751)	TOX2 (ENSCSAG00000014083) #27	JPH2 (ENSCSAG00000014091) #29	OSER1 (ENSCSAG00000014098) #30	GDAP1L1 (ENSCSAG00000014107) #31	FITM2 (ENSCSAG00000014112) #32	R3HDML (ENSCSAG00000014116) #33	HNF4A (ENSCSAG00000014124) #34	ENSCSAG00000018750	TTPAL (ENSCSAG00000014128) #35	SERINC3 (ENSCSAG00000014169) #36	PKIG (ENSCSAG00000014180)
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00910000147326	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00910000148100	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00940000155407 #35
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00910000147326	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00910000148100	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00940000155407 #35
Cercopithecinae_d	ANCESTRAL SPECIES	2	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00910000147326	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00910000148100	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00940000155407 #35
Drill	MODERN SPECIES	1210													PTPRT (ENSMLEG00000031508) #20	ENSMLEG00000027185	SRSF6 (ENSMLEG00000031524) #21	L3MBTL1 (ENSMLEG00000038509) #22	SGK2 (ENSMLEG00000039699) #24	IFT52 (ENSMLEG00000038006) #25
Sooty mangabey	MODERN SPECIES	135				MAFB (ENSCATG00000041820) #7	TOP1 (ENSCATG00000044132) #8	PLCG1 (ENSCATG00000034738) #10	ZHX3 (ENSCATG00000029751) #11	LPIN3 (ENSCATG00000040027) #13	EMILIN3 (ENSCATG00000042373) #14	CHD6 (ENSCATG00000039248) #16	PTPRT (ENSCATG00000028168) #20	ENSCATG00000022989	ENSCATG00000031027 #20	ENSCATG00000044139	SRSF6 (ENSCATG00000030794) #21	L3MBTL1 (ENSCATG00000042408) #22	SGK2 (ENSCATG00000037153) #24	IFT52 (ENSCATG00000037189) #25	MYBL2 (ENSCATG00000043906) #26	GTSF1L (ENSCATG00000030101)	ENSCATG00000030480	TOX2 (ENSCATG00000045090) #27	JPH2 (ENSCATG00000034238) #29	OSER1 (ENSCATG00000033408) #30	ENSCATG00000021831	GDAP1L1 (ENSCATG00000033032) #31	FITM2 (ENSCATG00000044347) #32	R3HDML (ENSCATG00000031774) #33	HNF4A (ENSCATG00000041186) #34	ENSCATG00000002768	ENSCATG00000036504
Olive baboon	MODERN SPECIES	7	PPP1R16B (ENSPANG00000020364)	FAM83D (ENSPANG00000015299)	ENSPANG00000001841	DHX35 (ENSPANG00000016616)	MAFB (ENSPANG00000016615) #7	TOP1 (ENSPANG00000025552) #8	PLCG1 (ENSPANG00000023857) #10	ZHX3 (ENSPANG00000023855) #11	LPIN3 (ENSPANG00000010914) #13	EMILIN3 (ENSPANG00000020628) #14	CHD6 (ENSPANG00000025554) #16	ENSPANG00000037008	PTPRT (ENSPANG00000010915) #20	ENSPANG00000041815	SRSF6 (ENSPANG00000035224) #21	L3MBTL1 (ENSPANG00000026135) #22	SGK2 (ENSPANG00000003908) #24	IFT52 (ENSPANG00000021782) #25	MYBL2 (ENSPANG00000023992) #26	ENSPANG00000010304	TOX2 (ENSPANG00000023990) #27	JPH2 (ENSPANG00000023989) #29	OSER1 (ENSPANG00000022564) #30	GDAP1L1 (ENSPANG00000022715) #31	FITM2 (ENSPANG00000022713) #32	R3HDML (ENSPANG00000030933) #33	HNF4A (ENSPANG00000026281) #34	TTPAL (ENSPANG00000026279) #35	SERINC3 (ENSPANG00000024778) #36	PKIG (ENSPANG00000022565)	ADA (ENSPANG00000023202)
Macaca	ANCESTRAL SPECIES	16	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00980000199031	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00910000148100	ENSGT00940000157965 #34	ENSGT00860000134401	ENSGT00940000155407 #35
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.b.b.a.a	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00910000148100	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707
Crab-eating macaque	MODERN SPECIES	1	FAM83D (ENSMFAG00000001827)	DHX35 (ENSMFAG00000031593)	ENSMFAG00000055614	ENSMFAG00000052515	TOP1 (ENSMFAG00000042654) #8	PLCG1 (ENSMFAG00000000283) #10	ZHX3 (ENSMFAG00000038640) #11	ENSMFAG00000047948	LPIN3 (ENSMFAG00000038975) #13	EMILIN3 (ENSMFAG00000045816) #14	CHD6 (ENSMFAG00000032830) #16	PTPRT (ENSMFAG00000002480) #20	ENSMFAG00000030794	ENSMFAG00000032571	SRSF6 (ENSMFAG00000036925) #21	L3MBTL1 (ENSMFAG00000032249) #22	SGK2 (ENSMFAG00000032486) #24	IFT52 (ENSMFAG00000044608) #25	MYBL2 (ENSMFAG00000032458) #26	ENSMFAG00000062509	ENSMFAG00000026943	TOX2 (ENSMFAG00000036799) #27	JPH2 (ENSMFAG00000002372) #29	OSER1 (ENSMFAG00000000578) #30	GDAP1L1 (ENSMFAG00000031122) #31	ENSMFAG00000057869	FITM2 (ENSMFAG00000044491) #32	R3HDML (ENSMFAG00000038530) #33	HNF4A (ENSMFAG00000035660) #34	ENSMFAG00000053985	TTPAL (ENSMFAG00000036596) #35
Rhesus	MODERN SPECIES	1	SLC32A1 (ENSMMUG00000003376)	ACTR5 (ENSMMUG00000003378)	PPP1R16B (ENSMMUG00000043701)	DHX35 (ENSMMUG00000003385)	ENSMMUG00000062308	MAFB (ENSMMUG00000004148) #7	TOP1 (ENSMMUG00000011112) #8	PLCG1 (ENSMMUG00000005905) #10	ZHX3 (ENSMMUG00000005904) #11	LPIN3 (ENSMMUG00000004251) #13	ENSMMUG00000062719	EMILIN3 (ENSMMUG00000060981) #14	CHD6 (ENSMMUG00000020458) #16	PTPRT (ENSMMUG00000001108) #20	SRSF6 (ENSMMUG00000006742) #21	L3MBTL1 (ENSMMUG00000006738) #22	SGK2 (ENSMMUG00000007925) #24	IFT52 (ENSMMUG00000000396) #25	MYBL2 (ENSMMUG00000018137) #26	GTSF1L (ENSMMUG00000031325)	TOX2 (ENSMMUG00000002810) #27	JPH2 (ENSMMUG00000022865) #29	OSER1 (ENSMMUG00000002838) #30	GDAP1L1 (ENSMMUG00000002839) #31	FITM2 (ENSMMUG00000029871) #32	ENSMMUG00000052567	R3HDML (ENSMMUG00000022215) #33	ENSMMUG00000061760	HNF4A (ENSMMUG00000006464) #34	TTPAL (ENSMMUG00000013968) #35	SERINC3 (ENSMMUG00000013969) #36
Pig-tailed macaque	MODERN SPECIES	232	PPP1R16B (ENSMNEG00000028569)	FAM83D (ENSMNEG00000034208)	ENSMNEG00000034808	DHX35 (ENSMNEG00000024351)	MAFB (ENSMNEG00000039877) #7	TOP1 (ENSMNEG00000039142) #8	PLCG1 (ENSMNEG00000042674) #10	ZHX3 (ENSMNEG00000042368) #11	LPIN3 (ENSMNEG00000039469) #13	EMILIN3 (ENSMNEG00000040989) #14	CHD6 (ENSMNEG00000040847) #16	PTPRT (ENSMNEG00000044358) #20	ENSMNEG00000026898	ENSMNEG00000035327	ENSMNEG00000027392 #21	L3MBTL1 (ENSMNEG00000029144) #22	SGK2 (ENSMNEG00000035575) #24	IFT52 (ENSMNEG00000043443) #25	MYBL2 (ENSMNEG00000041969) #26	GTSF1L (ENSMNEG00000040264)	TOX2 (ENSMNEG00000036014) #27	JPH2 (ENSMNEG00000043285) #29	OSER1 (ENSMNEG00000039167) #30	ENSMNEG00000027331	GDAP1L1 (ENSMNEG00000034260) #31	FITM2 (ENSMNEG00000039084) #32	R3HDML (ENSMNEG00000031031) #33	HNF4A (ENSMNEG00000043900) #34	ENSMNEG00000022810	TTPAL (ENSMNEG00000033101) #35	SERINC3 (ENSMNEG00000039044) #36
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00950000185863	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Carnivora	ANCESTRAL SPECIES	20	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00950000185863	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Caniformia	ANCESTRAL SPECIES		ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00950000185863	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Canidae	ANCESTRAL SPECIES	19	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00960000189497	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Red fox	MODERN SPECIES	28														ENSVVUG00000019276 #21	ENSVVUG00000019270 #21	L3MBTL1 (ENSVVUG00000019241) #22	SGK2 (ENSVVUG00000019224) #24	IFT52 (ENSVVUG00000019214) #25	MYBL2 (ENSVVUG00000019208) #26	GTSF1L (ENSVVUG00000019198)	TOX2 (ENSVVUG00000019189) #27	ENSVVUG00000019181 #29	OSER1 (ENSVVUG00000019175) #30	GDAP1L1 (ENSVVUG00000019168) #31	FITM2 (ENSVVUG00000019164) #32	R3HDML (ENSVVUG00000019159) #33	HNF4A (ENSVVUG00000019151) #34	TTPAL (ENSVVUG00000019146) #35	SERINC3 (ENSVVUG00000019138) #36	PKIG (ENSVVUG00000019128)	ADA (ENSVVUG00000019108)
Canis_lupus	ANCESTRAL SPECIES	13	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142.e	ENSGT00940000160486 #7	ENSGT00960000189497	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000165194.h	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Dog	MODERN SPECIES	16	FAM83D (ENSCAFG00845029758)	DHX35 (ENSCAFG00845029837)	MAFB (ENSCAFG00845029935) #7	ENSCAFG00845029948	ENSCAFG00845029958	TOP1 (ENSCAFG00845029978) #8	PLCG1 (ENSCAFG00845030031) #10	ZHX3 (ENSCAFG00845030069) #11	LPIN3 (ENSCAFG00845030082) #13	EMILIN3 (ENSCAFG00845030099) #14	CHD6 (ENSCAFG00845010958) #16	ENSCAFG00845011152	PTPRT (ENSCAFG00845011487) #20	ENSCAFG00845012745	SRSF6 (ENSCAFG00845012776) #21	L3MBTL1 (ENSCAFG00845012881) #22	SGK2 (ENSCAFG00845013091) #24	IFT52 (ENSCAFG00845013169) #25	MYBL2 (ENSCAFG00845013268) #26	GTSF1L (ENSCAFG00845013347)	TOX2 (ENSCAFG00845013388) #27	JPH2 (ENSCAFG00845013468) #29	OSER1 (ENSCAFG00845013506) #30	GDAP1L1 (ENSCAFG00845013568) #31	FITM2 (ENSCAFG00845013597) #32	HNF4A (ENSCAFG00845013683) #34	SERINC3 (ENSCAFG00845013824) #36	TTPAL (ENSCAFG00845013856) #35	ADA (ENSCAFG00845013933)	CCN5 (ENSCAFG00845013975)	KCNK15 (ENSCAFG00845014007)
Dingo	MODERN SPECIES	343	ENSCAFG00020012796	MAFB (ENSCAFG00020012806) #7	ENSCAFG00020012813	ENSCAFG00020012814	ENSCAFG00020012815	TOP1 (ENSCAFG00020012816) #8	PLCG1 (ENSCAFG00020012842) #10	ZHX3 (ENSCAFG00020012867) #11	LPIN3 (ENSCAFG00020012871) #13	EMILIN3 (ENSCAFG00020012880) #14	CHD6 (ENSCAFG00020012906) #16	ENSCAFG00020013245	PTPRT (ENSCAFG00020013306) #20	ENSCAFG00020013551	SRSF6 (ENSCAFG00020013559) #21	L3MBTL1 (ENSCAFG00020013565) #22	IFT52 (ENSCAFG00020013612) #25	MYBL2 (ENSCAFG00020013641) #26	GTSF1L (ENSCAFG00020013648)	TOX2 (ENSCAFG00020013660) #27	JPH2 (ENSCAFG00020013671) #29	OSER1 (ENSCAFG00020013674) #30	GDAP1L1 (ENSCAFG00020013675) #31	FITM2 (ENSCAFG00020013677) #32	R3HDML (ENSCAFG00020013680) #33	HNF4A (ENSCAFG00020013687) #34	TTPAL (ENSCAFG00020013721) #35	SERINC3 (ENSCAFG00020013727) #36	PKIG (ENSCAFG00020013731)	ADA (ENSCAFG00020013741)	CCN5 (ENSCAFG00020013807)
Caniformia_b	ANCESTRAL SPECIES		ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00950000185863	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Mustelinae	ANCESTRAL SPECIES	11	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00950000185863	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Ferret	MODERN SPECIES	180	PPP1R16B (ENSMPUG00000017725)	FAM83D (ENSMPUG00000017724)	DHX35 (ENSMPUG00000017704)	MAFB (ENSMPUG00000017703) #7	ENSMPUG00000017702	TOP1 (ENSMPUG00000017701) #8	PLCG1 (ENSMPUG00000017700) #10	ZHX3 (ENSMPUG00000017699) #11	LPIN3 (ENSMPUG00000017698) #13	EMILIN3 (ENSMPUG00000017697) #14	ENSMPUG00000017696	CHD6 (ENSMPUG00000017695) #16	PTPRT (ENSMPUG00000017694) #20	ENSMPUG00000017693	SRSF6 (ENSMPUG00000017692) #21	L3MBTL1 (ENSMPUG00000017691) #22	SGK2 (ENSMPUG00000017690) #24	IFT52 (ENSMPUG00000017688) #25	MYBL2 (ENSMPUG00000017680) #26	GTSF1L (ENSMPUG00000019027)	TOX2 (ENSMPUG00000017679) #27	JPH2 (ENSMPUG00000017678) #29	OSER1 (ENSMPUG00000017676) #30	GDAP1L1 (ENSMPUG00000017675) #31	FITM2 (ENSMPUG00000017673) #32	R3HDML (ENSMPUG00000017670) #33	HNF4A (ENSMPUG00000017669) #34	TTPAL (ENSMPUG00000017668) #35	SERINC3 (ENSMPUG00000017667) #36	ENSMPUG00000017666	PKIG (ENSMPUG00000017665)
American mink	MODERN SPECIES	17	SLC32A1 (ENSNVIG00000012988)	ACTR5 (ENSNVIG00000012964)	PPP1R16B (ENSNVIG00000012931)	FAM83D (ENSNVIG00000012918)	DHX35 (ENSNVIG00000012855)	ENSNVIG00000012847	MAFB (ENSNVIG00000012845) #7	TOP1 (ENSNVIG00000012811) #8	PLCG1 (ENSNVIG00000012749) #10	ZHX3 (ENSNVIG00000012731) #11	LPIN3 (ENSNVIG00000012685) #13	EMILIN3 (ENSNVIG00000012674) #14	CHD6 (ENSNVIG00000012634) #16	PTPRT (ENSNVIG00000012257) #20	SRSF6 (ENSNVIG00000012220) #21	L3MBTL1 (ENSNVIG00000012134) #22	SGK2 (ENSNVIG00000012067) #24	IFT52 (ENSNVIG00000012030) #25	MYBB (ENSNVIG00000011937) #26	GTSF1L (ENSNVIG00000011897)	TOX2 (ENSNVIG00000011841) #27	ENSNVIG00000011811 #29	CT111 (ENSNVIG00000011784) #30	GDAP1L1 (ENSNVIG00000011749) #31	FITM2 (ENSNVIG00000011727) #32	R3HDML (ENSNVIG00000011707) #33	HNF4A (ENSNVIG00000011576) #34	ENSNVIG00000011544 #35	SERINC3 (ENSNVIG00000011512) #36	PKIG (ENSNVIG00000011485)	ADA (ENSNVIG00000011442)
Ursidae	ANCESTRAL SPECIES	14	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00990000210656	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a.x #36	ENSGT00390000002707.a	ENSGT00950000183113.a.b
Giant Panda	MODERN SPECIES	4	RALGAPB (ENSAMEG00000012020)	ACTR5 (ENSAMEG00000011986)	PPP1R16B (ENSAMEG00000011968)	FAM83D (ENSAMEG00000011957)	DHX35 (ENSAMEG00000011925)	ENSAMEG00000023634	MAFB (ENSAMEG00000031472) #7	TOP1 (ENSAMEG00000009674) #8	PLCG1 (ENSAMEG00000009575) #10	ZHX3 (ENSAMEG00000029010) #11	LPIN3 (ENSAMEG00000009523) #13	EMILIN3 (ENSAMEG00000009519) #14	CHD6 (ENSAMEG00000009496) #16	PTPRT (ENSAMEG00000009453) #20	SRSF6 (ENSAMEG00000003710) #21	L3MBTL1 (ENSAMEG00000003728) #22	ENSAMEG00000003739 #24	IFT52 (ENSAMEG00000003789) #25	MYBL2 (ENSAMEG00000003831) #26	GTSF1L (ENSAMEG00000019599)	TOX2 (ENSAMEG00000003885) #27	ENSAMEG00000027231 #29	ENSAMEG00000029804 #29	OSER1 (ENSAMEG00000003918) #30	GDAP1L1 (ENSAMEG00000003931) #31	FITM2 (ENSAMEG00000003949) #32	R3HDML (ENSAMEG00000003953) #33	HNF4A (ENSAMEG00000003960) #34	TTPAL (ENSAMEG00000003985) #35	SERINC3 (ENSAMEG00000003993) #36	PKIG (ENSAMEG00000004030)
Ursus	ANCESTRAL SPECIES	1	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00990000210656	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a.x #36	ENSGT00390000002707.a	ENSGT00950000183113.a.b
American black bear	DUPLICATION
American black bear	MODERN SPECIES	7613															ENSUAMG00000011811 #22	ENSUAMG00000011809 #22
American black bear	MODERN SPECIES	7613																ENSUAMG00000011811 #22	ENSUAMG00000011809 #22
Polar bear	MODERN SPECIES	211	RALGAPB (ENSUMAG00000003455)	ADIG (ENSUMAG00000003449)	SLC32A1 (ENSUMAG00000003436)	ACTR5 (ENSUMAG00000003376)	PPP1R16B (ENSUMAG00000003356)	FAM83D (ENSUMAG00000003348)	DHX35 (ENSUMAG00000003211)	ENSUMAG00000003202	TOP1 (ENSUMAG00000002667) #8	PLCG1 (ENSUMAG00000002559) #10	ZHX3 (ENSUMAG00000002547) #11	LPIN3 (ENSUMAG00000002534) #13	CHD6 (ENSUMAG00000002017) #16	PTPRT (ENSUMAG00000001211) #20	SRSF6 (ENSUMAG00000001154) #21	L3MBTL1 (ENSUMAG00000001119) #22	SGK2 (ENSUMAG00000001110) #24	IFT52 (ENSUMAG00000001091) #25	MYBL2 (ENSUMAG00000000935) #26	GTSF1L (ENSUMAG00000000902)	TOX2 (ENSUMAG00000000808) #27	ENSUMAG00000000793 #29	OSER1 (ENSUMAG00000000789) #30	GDAP1L1 (ENSUMAG00000000665) #31	FITM2 (ENSUMAG00000000647) #32	R3HDML (ENSUMAG00000000629) #33	HNF4A (ENSUMAG00000000364) #34	TTPAL (ENSUMAG00000000203) #35	SERINC3 (ENSUMAG00000000095) #36	PKIG (ENSUMAG00000025442)	ADA (ENSUMAG00000025440)
Felidae	ANCESTRAL SPECIES	3	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326.u #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Cat	MODERN SPECIES	2	RALGAPB (ENSFCAG00000004814)	ADIG (ENSFCAG00000034815)	SLC32A1 (ENSFCAG00000046479)	ACTR5 (ENSFCAG00000015488)	PPP1R16B (ENSFCAG00000022215)	DHX35 (ENSFCAG00000025103)	MAFB (ENSFCAG00000010841) #7	TOP1 (ENSFCAG00000009029) #8	PLCG1 (ENSFCAG00000009032) #10	ZHX3 (ENSFCAG00000009034) #11	LPIN3 (ENSFCAG00000003568) #13	EMILIN3 (ENSFCAG00000003570) #14	CHD6 (ENSFCAG00000003572) #16	PTPRT (ENSFCAG00000004770) #20	SRSF6 (ENSFCAG00000032814) #21	L3MBTL1 (ENSFCAG00000004771) #22	SGK2 (ENSFCAG00000001877) #24	IFT52 (ENSFCAG00000011137) #25	MYBL2 (ENSFCAG00000011141) #26	GTSF1L (ENSFCAG00000011143)	TOX2 (ENSFCAG00000025798) #27	JPH2 (ENSFCAG00000042905) #29	OSER1 (ENSFCAG00000030078) #30	GDAP1L1 (ENSFCAG00000008175) #31	FITM2 (ENSFCAG00000035207) #32	R3HDML (ENSFCAG00000008177) #33	HNF4A (ENSFCAG00000008178) #34	TTPAL (ENSFCAG00000008179) #35	SERINC3 (ENSFCAG00000000341) #36	PKIG (ENSFCAG00000041654)	ADA (ENSFCAG00000002474)
Panthera	ANCESTRAL SPECIES	2	ENSGT00700000104550.a	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326.u #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Tiger	MODERN SPECIES	106	RALGAPB (ENSPTIG00000016817)	ADIG (ENSPTIG00000020713)	SLC32A1 (ENSPTIG00000021029)	ACTR5 (ENSPTIG00000021181)	PPP1R16B (ENSPTIG00000001218)	FAM83D (ENSPTIG00000007307)	DHX35 (ENSPTIG00000009935)	TOP1 (ENSPTIG00000017003) #8	ENSPTIG00000008184 #11	LPIN3 (ENSPTIG00000008580) #13	CHD6 (ENSPTIG00000011094) #16	ENSPTIG00000006826	ENSPTIG00000016538 #20	ENSPTIG00000018550 #20	SRSF6 (ENSPTIG00000019153) #21	L3MBTL1 (ENSPTIG00000019723) #22	SGK2 (ENSPTIG00000008876) #24	IFT52 (ENSPTIG00000012311) #25	MYBL2 (ENSPTIG00000013164) #26	GTSF1L (ENSPTIG00000017302)	TOX2 (ENSPTIG00000017893) #27	ENSPTIG00000021031 #29	OSER1 (ENSPTIG00000021536) #30	GDAP1L1 (ENSPTIG00000004614) #31	FITM2 (ENSPTIG00000010767) #32	R3HDML (ENSPTIG00000011573) #33	HNF4A (ENSPTIG00000012260) #34	TTPAL (ENSPTIG00000017912) #35	SERINC3 (ENSPTIG00000019064) #36	PKIG (ENSPTIG00000019303)	ADA (ENSPTIG00000020943)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00700000104550.a	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326.u #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
lion	MODERN SPECIES	3	RALGAPB (ENSPLOG00000002437)	ADIG (ENSPLOG00000002452)	SLC32A1 (ENSPLOG00000002517)	ACTR5 (ENSPLOG00000002534)	PPP1R16B (ENSPLOG00000002564)	FAM83D (ENSPLOG00000002582)	DHX35 (ENSPLOG00000002693)	MAFB (ENSPLOG00000002870) #7	TOP1 (ENSPLOG00000002902) #8	ZHX3 (ENSPLOG00000003093) #11	LPIN3 (ENSPLOG00000003121) #13	EMILIN3 (ENSPLOG00000003171) #14	CHD6 (ENSPLOG00000003206) #16	PTPRT (ENSPLOG00000003358) #20	SRSF6 (ENSPLOG00000003590) #21	L3MBTL1 (ENSPLOG00000003613) #22	SGK2 (ENSPLOG00000003648) #24	IFT52 (ENSPLOG00000003679) #25	MYBL2 (ENSPLOG00000003860) #26	GTSF1L (ENSPLOG00000003905)	TOX2 (ENSPLOG00000003928) #27	JPH2 (ENSPLOG00000003956) #29	OSER1 (ENSPLOG00000003967) #30	GDAP1L1 (ENSPLOG00000003993) #31	FITM2 (ENSPLOG00000004060) #32	R3HDML (ENSPLOG00000004072) #33	HNF4A (ENSPLOG00000004118) #34	TTPAL (ENSPLOG00000004173) #35	SERINC3 (ENSPLOG00000004186) #36	PKIG (ENSPLOG00000004198)	ADA (ENSPLOG00000004212)
leopard	MODERN SPECIES	32	RALGAPB (ENSPPRG00000000955)	ADIG (ENSPPRG00000001139)	SLC32A1 (ENSPPRG00000001576)	ACTR5 (ENSPPRG00000002121)	PPP1R16B (ENSPPRG00000003737)	FAM83D (ENSPPRG00000004070)	DHX35 (ENSPPRG00000007005)	MAFB (ENSPPRG00000018421) #7	TOP1 (ENSPPRG00000009342) #8	ZHX3 (ENSPPRG00000010294) #11	LPIN3 (ENSPPRG00000010946) #13	EMILIN3 (ENSPPRG00000011280) #14	CHD6 (ENSPPRG00000014756) #16	PTPRT (ENSPPRG00000008600) #20	SRSF6 (ENSPPRG00000008917) #21	L3MBTL1 (ENSPPRG00000012951) #22	SGK2 (ENSPPRG00000017021) #24	IFT52 (ENSPPRG00000018606) #25	MYBL2 (ENSPPRG00000023464) #26	GTSF1L (ENSPPRG00000023086)	TOX2 (ENSPPRG00000002249) #27	JPH2 (ENSPPRG00000003859) #29	OSER1 (ENSPPRG00000004963) #30	GDAP1L1 (ENSPPRG00000006359) #31	FITM2 (ENSPPRG00000006983) #32	R3HDML (ENSPPRG00000007328) #33	HNF4A (ENSPPRG00000010106) #34	TTPAL (ENSPPRG00000010653) #35	SERINC3 (ENSPPRG00000011195) #36	PKIG (ENSPPRG00000012484)	ADA (ENSPPRG00000013211)
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00950000185863	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Equus	ANCESTRAL SPECIES	8	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00950000185863	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Horse	MODERN SPECIES	14	SLC32A1 (ENSECAG00000022995)	ACTR5 (ENSECAG00000024781)	PPP1R16B (ENSECAG00000008784)	FAM83D (ENSECAG00000013238)	DHX35 (ENSECAG00000013881)	ENSECAG00000051307	MAFB (ENSECAG00000024705) #7	TOP1 (ENSECAG00000000383) #8	PLCG1 (ENSECAG00000021031) #10	ZHX3 (ENSECAG00000016520) #11	LPIN3 (ENSECAG00000016882) #13	EMILIN3 (ENSECAG00000010749) #14	CHD6 (ENSECAG00000011761) #16	PTPRT (ENSECAG00000021728) #20	SRSF6 (ENSECAG00000023932) #21	L3MBTL1 (ENSECAG00000008175) #22	SGK2 (ENSECAG00000047159) #24	IFT52 (ENSECAG00000020781) #25	MYBL2 (ENSECAG00000005925) #26	GTSF1L (ENSECAG00000011252)	TOX2 (ENSECAG00000011396) #27	JPH2 (ENSECAG00000016786) #29	OSER1 (ENSECAG00000018849) #30	GDAP1L1 (ENSECAG00000021049) #31	FITM2 (ENSECAG00000023757) #32	R3HDML (ENSECAG00000023872) #33	HNF4A (ENSECAG00000024450) #34	TTPAL (ENSECAG00000015398) #35	SERINC3 (ENSECAG00000017954) #36	ENSECAG00000055761	ADA (ENSECAG00000008358)
Donkey	MODERN SPECIES	6	SLC32A1 (ENSEASG00005023475)	ACTR5 (ENSEASG00005023474)	PPP1R16B (ENSEASG00005023472)	FAM83D (ENSEASG00005023471)	DHX35 (ENSEASG00005023467)	ENSEASG00005023462	MAFB (ENSEASG00005029044) #7	TOP1 (ENSEASG00005023454) #8	PLCG1 (ENSEASG00005023446) #10	ZHX3 (ENSEASG00005023438) #11	LPIN3 (ENSEASG00005023437) #13	EMILIN3 (ENSEASG00005024455) #14	CHD6 (ENSEASG00005023433) #16	PTPRT (ENSEASG00005023430) #20	SRSF6 (ENSEASG00005034210) #21	L3MBTL1 (ENSEASG00005023428) #22	SGK2 (ENSEASG00005023427) #24	IFT52 (ENSEASG00005023426) #25	MYBL2 (ENSEASG00005023425) #26	ENSEASG00005024526	TOX2 (ENSEASG00005023423) #27	JPH2 (ENSEASG00005023422) #29	OSER1 (ENSEASG00005023421) #30	GDAP1L1 (ENSEASG00005023420) #31	FITM2 (ENSEASG00005026115) #32	R3HDML (ENSEASG00005023418) #33	HNF4A (ENSEASG00005023417) #34	TTPAL (ENSEASG00005023416) #35	SERINC3 (ENSEASG00005023415) #36	PKIG (ENSEASG00005036773)	ADA (ENSEASG00005023413)
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581.n #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Megabat	MODERN SPECIES	311															SRSF6 (ENSPVAG00000015232) #21	L3MBTL1 (ENSPVAG00000015234) #22	SGK2 (ENSPVAG00000015235) #24
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581.n #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Microbat	MODERN SPECIES	953	ACTR5 (ENSMLUG00000009154)	PPP1R16B (ENSMLUG00000009177)	FAM83D (ENSMLUG00000009206)	DHX35 (ENSMLUG00000009227)	MAFB (ENSMLUG00000003028) #7	TOP1 (ENSMLUG00000003032) #8	PLCG1 (ENSMLUG00000010166) #10	ZHX3 (ENSMLUG00000010226) #11	LPIN3 (ENSMLUG00000016211) #13	EMILIN3 (ENSMLUG00000030690) #14	CHD6 (ENSMLUG00000016247) #16	ENSMLUG00000022572	ENSMLUG00000023163	PTPRT (ENSMLUG00000017668) #20	SRSF6 (ENSMLUG00000016618) #21	L3MBTL1 (ENSMLUG00000016624) #22	SGK2 (ENSMLUG00000016647) #24	ENSMLUG00000016664 #25
Greater horseshoe bat	MODERN SPECIES	15	SLC32A1 (ENSRFEG00010010846)	ACTR5 (ENSRFEG00010010585)	PPP1R16B (ENSRFEG00010010478)	FAM83D (ENSRFEG00010010347)	DHX35 (ENSRFEG00010010236)	MAFB (ENSRFEG00010010124) #7	TOP1 (ENSRFEG00010010068) #8	PLCG1 (ENSRFEG00010009990) #10	ZHX3 (ENSRFEG00010009961) #11	ENSRFEG00010009942	LPIN3 (ENSRFEG00010009847) #13	EMILIN3 (ENSRFEG00010009783) #14	CHD6 (ENSRFEG00010009700) #16	PTPRT (ENSRFEG00010007762) #20	SRSF6 (ENSRFEG00010007675) #21	L3MBTL1 (ENSRFEG00010007142) #22	SGK2 (ENSRFEG00010006923) #24	IFT52 (ENSRFEG00010006766) #25	MYBL2 (ENSRFEG00010006578) #26	GTSF1L (ENSRFEG00010006542)	TOX2 (ENSRFEG00010006461) #27	JPH2 (ENSRFEG00010006408) #29	OSER1 (ENSRFEG00010006376) #30	GDAP1L1 (ENSRFEG00010006319) #31	FITM2 (ENSRFEG00010006290) #32	R3HDML (ENSRFEG00010006263) #33	HNF4A (ENSRFEG00010006125) #34	TTPAL (ENSRFEG00010005970) #35	SERINC3 (ENSRFEG00010005916) #36	PKIG (ENSRFEG00010005891)	ADA (ENSRFEG00010005851)
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Pecora	ANCESTRAL SPECIES	9	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Percora_a	ANCESTRAL SPECIES	10	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Bovidae	ANCESTRAL SPECIES	10	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Caprinae	ANCESTRAL SPECIES	21	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Rambouillet Sheep	MODERN SPECIES	4	ADIG (ENSOARG00020011761)	SLC32A1 (ENSOARG00020011811)	ACTR5 (ENSOARG00020011845)	PPP1R16B (ENSOARG00020011970)	FAM83D (ENSOARG00020012275)	DHX35 (ENSOARG00020012378)	MAFB (ENSOARG00020013364) #7	ENSOARG00020013402 #8	PLCG1 (ENSOARG00020013699) #10	ZHX3 (ENSOARG00020014048) #11	LPIN3 (ENSOARG00020014085) #13	EMILIN3 (ENSOARG00020014278) #14	CHD6 (ENSOARG00020014349) #16	PTPRT (ENSOARG00020014792) #20	SRSF6 (ENSOARG00020016800) #21	L3MBTL1 (ENSOARG00020016862) #22	SGK2 (ENSOARG00020017305) #24	IFT52 (ENSOARG00020017446) #25	MYBL2 (ENSOARG00020017542) #26	GTSF1L (ENSOARG00020017747)	ENSOARG00020017790	TOX2 (ENSOARG00020017817) #27	JPH2 (ENSOARG00020017975) #29	OSER1 (ENSOARG00020009970) #30	GDAP1L1 (ENSOARG00020010041) #31	FITM2 (ENSOARG00020010200) #32	R3HDML (ENSOARG00020010232) #33	HNF4A (ENSOARG00020010341) #34	TTPAL (ENSOARG00020010927) #35	SERINC3 (ENSOARG00020010967) #36	PKIG (ENSOARG00020011080)
Goat	MODERN SPECIES	4	ACTR5 (ENSCHIG00000011023)	PPP1R16B (ENSCHIG00000012370)	FAM83D (ENSCHIG00000023451)	DHX35 (ENSCHIG00000023863)	MAFB (ENSCHIG00000013144) #7	TOP1 (ENSCHIG00000024107) #8	PLCG1 (ENSCHIG00000024684) #10	ZHX3 (ENSCHIG00000021182) #11	LPIN3 (ENSCHIG00000010855) #13	EMILIN3 (ENSCHIG00000023223) #14	CHD6 (ENSCHIG00000017606) #16	ENSCHIG00000023124 #20	ENSCHIG00000025608 #20	ENSCHIG00000003779	ENSCHIG00000015890 #21	L3MBTL1 (ENSCHIG00000027253) #22	SGK2 (ENSCHIG00000022211) #24	IFT52 (ENSCHIG00000022197) #25	MYBL2 (ENSCHIG00000010139) #26	GTSF1L (ENSCHIG00000020800)	ENSCHIG00000023945	TOX2 (ENSCHIG00000020737) #27	JPH2 (ENSCHIG00000025563) #29	OSER1 (ENSCHIG00000011121) #30	GDAP1L1 (ENSCHIG00000016660) #31	FITM2 (ENSCHIG00000026096) #32	R3HDML (ENSCHIG00000025978) #33	HNF4A (ENSCHIG00000017334) #34	TTPAL (ENSCHIG00000015919) #35	SERINC3 (ENSCHIG00000020489) #36	PKIG (ENSCHIG00000022691)
Bovinae	ANCESTRAL SPECIES	23	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.b.b.a.b	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Bos	ANCESTRAL SPECIES	24	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.b.b.a.b	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Bos_b	ANCESTRAL SPECIES	26	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000166863	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT01100000263511.b.a.b.a.b.a.b.b.a.b.a.b.a.b.a.a.a.a.b	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707
Hybrid Bos Indicus	MODERN SPECIES	4	ADIG (ENSBIXG00005012712)	SLC32A1 (ENSBIXG00005012734)	ACTR5 (ENSBIXG00005012759)	ENSBIXG00005001437	DHX35 (ENSBIXG00005012979)	MAFB (ENSBIXG00005001483) #7	TOP1 (ENSBIXG00005013082) #8	PLCG1 (ENSBIXG00005007441) #10	ZHX3 (ENSBIXG00005013154) #11	ENSBIXG00005013177	LPIN3 (ENSBIXG00005013199) #13	EMILIN3 (ENSBIXG00005013208) #14	CHD6 (ENSBIXG00005013298) #16	PTPRT (ENSBIXG00005013934) #20	SRSF6 (ENSBIXG00005014053) #21	L3MBTL1 (ENSBIXG00005014085) #22	ENSBIXG00005014149	ENSBIXG00005014172	IFT52 (ENSBIXG00005001855) #25	MYBL2 (ENSBIXG00005001915) #26	GTSF1L (ENSBIXG00005014385)	ENSBIXG00005006221	TOX2 (ENSBIXG00005001935) #27	JPH2 (ENSBIXG00005014484) #29	OSER1 (ENSBIXG00005014524) #30	ENSBIXG00005014536	GDAP1L1 (ENSBIXG00005014559) #31	FITM2 (ENSBIXG00005014582) #32	R3HDML (ENSBIXG00005014597) #33	HNF4A (ENSBIXG00005014671) #34	TTPAL (ENSBIXG00005014703) #35
Cow	MODERN SPECIES	4	ADIG (ENSBTAG00000031188)	SLC32A1 (ENSBTAG00000047894)	ACTR5 (ENSBTAG00000048262)	PPP1R16B (ENSBTAG00000000653)	FAM83D (ENSBTAG00000000660)	DHX35 (ENSBTAG00000004039)	MAFB (ENSBTAG00000003396) #7	TOP1 (ENSBTAG00000007960) #8	PLCG1 (ENSBTAG00000017584) #10	ZHX3 (ENSBTAG00000017594) #11	LPIN3 (ENSBTAG00000009165) #13	EMILIN3 (ENSBTAG00000016279) #14	CHD6 (ENSBTAG00000005733) #16	PTPRT (ENSBTAG00000000309) #20	SRSF6 (ENSBTAG00000008527) #21	L3MBTL1 (ENSBTAG00000048526) #22	SGK2 (ENSBTAG00000021033)	IFT52 (ENSBTAG00000019606) #25	MYBL2 (ENSBTAG00000007783) #26	GTSF1L (ENSBTAG00000011233)	ENSBTAG00000050564	TOX2 (ENSBTAG00000016741) #27	ENSBTAG00000052404 #29	ENSBTAG00000052443 #29	OSER1 (ENSBTAG00000016873) #30	ENSBTAG00000053638	GDAP1L1 (ENSBTAG00000002593) #31	FITM2 (ENSBTAG00000020030) #32	R3HDML (ENSBTAG00000013220) #33	HNF4A (ENSBTAG00000012116) #34	TTPAL (ENSBTAG00000018873) #35
Bos_a	ANCESTRAL SPECIES	7	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT01100000263506.a.e.a.a.a.b.b.a.b.a.b.b.a.b.b	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Wild yak	MODERN SPECIES	2491															SRSF6 (ENSBMUG00000013638) #21	L3MBTL1 (ENSBMUG00000013813) #22	SGK2 (ENSBMUG00000014057) #24	IFT52 (ENSBMUG00000014373) #25	MYBL2 (ENSBMUG00000014693) #26	GTSF1L (ENSBMUG00000014989)
Domestic yak	MODERN SPECIES	3	ACTR5 (ENSBGRG00000006471)	PPP1R16B (ENSBGRG00000006528)	FAM83D (ENSBGRG00000006638)	DHX35 (ENSBGRG00000006666)	ENSBGRG00000006769	MAFB (ENSBGRG00000006785) #7	TOP1 (ENSBGRG00000006806) #8	PLCG1 (ENSBGRG00000006992) #10	ZHX3 (ENSBGRG00000009028) #11	LPIN3 (ENSBGRG00000009133) #13	EMILIN3 (ENSBGRG00000009220) #14	CHD6 (ENSBGRG00000009312) #16	ENSBGRG00000009495	PTPRT (ENSBGRG00000009617) #20	SRSF6 (ENSBGRG00000011891) #21	L3MBTL1 (ENSBGRG00000012035) #22	SGK2 (ENSBGRG00000012136) #24	IFT52 (ENSBGRG00000012235) #25	MYBL2 (ENSBGRG00000012371) #26	GTSF1L (ENSBGRG00000012590)	TOX2 (ENSBGRG00000012679) #27	JPH2 (ENSBGRG00000012878) #29	OSER1 (ENSBGRG00000012991) #30	GDAP1L1 (ENSBGRG00000013057) #31	FITM2 (ENSBGRG00000013140) #32	R3HDML (ENSBGRG00000013179) #33	HNF4A (ENSBGRG00000013238) #34	TTPAL (ENSBGRG00000013808) #35	SERINC3 (ENSBGRG00000013845) #36	ENSBGRG00000013954	ADA (ENSBGRG00000014023)
American bison	MODERN SPECIES	3355	SLC32A1 (ENSBBBG00000000945)	ACTR5 (ENSBBBG00000000927)	PPP1R16B (ENSBBBG00000000883)	FAM83D (ENSBBBG00000000868)	ENSBBBG00000000864	DHX35 (ENSBBBG00000014950)	TOP1 (ENSBBBG00000003577) #8	PLCG1 (ENSBBBG00000003546) #10	ZHX3 (ENSBBBG00000003764) #11	LPIN3 (ENSBBBG00000015220) #13	EMILIN3 (ENSBBBG00000015230) #14	CHD6 (ENSBBBG00000003796) #16	ENSBBBG00000000794	PTPRT (ENSBBBG00000015481) #20	SRSF6 (ENSBBBG00000015524) #21	L3MBTL1 (ENSBBBG00000015584) #22	SGK2 (ENSBBBG00000003461) #24	IFT52 (ENSBBBG00000003430) #25	MYBL2 (ENSBBBG00000015708) #26	GTSF1L (ENSBBBG00000015716)	TOX2 (ENSBBBG00000015804) #27	ENSBBBG00000015828 #29	OSER1 (ENSBBBG00000015837) #30
Siberian musk deer	MODERN SPECIES	1198	PPP1R16B (ENSMMSG00000021711)	FAM83D (ENSMMSG00000021687)	DHX35 (ENSMMSG00000021611)	ENSMMSG00000021558	ENSMMSG00000021544	MAFB (ENSMMSG00000021529) #7	ENSMMSG00000021521	TOP1 (ENSMMSG00000021477) #8	PLCG1 (ENSMMSG00000021442) #10	ZHX3 (ENSMMSG00000021418) #11	LPIN3 (ENSMMSG00000021376) #13	EMILIN3 (ENSMMSG00000021335) #14	CHD6 (ENSMMSG00000021276) #16	PTPRT (ENSMMSG00000020333) #20	SRSF6 (ENSMMSG00000020249) #21	L3MBTL1 (ENSMMSG00000020153) #22	SGK2 (ENSMMSG00000020060) #24	IFT52 (ENSMMSG00000019966) #25	MYBL2 (ENSMMSG00000019605) #26	GTSF1L (ENSMMSG00000019571)	ENSMMSG00000019561	TOX2 (ENSMMSG00000019474) #27	JPH2 (ENSMMSG00000019438) #29	OSER1 (ENSMMSG00000019399) #30	GDAP1L1 (ENSMMSG00000019250) #31	ENSMMSG00000019217	FITM2 (ENSMMSG00000019203) #32	R3HDML (ENSMMSG00000019173) #33	HNF4A (ENSMMSG00000018701) #34	TTPAL (ENSMMSG00000018623) #35	SERINC3 (ENSMMSG00000018583) #36
Yarkand deer	MODERN SPECIES	15	FAM83D (ENSCHYG00000023508)	DHX35 (ENSCHYG00000023557)	MAFB (ENSCHYG00000023859) #7	ENSCHYG00000023883 #8	ENSCHYG00000024046	PLCG1 (ENSCHYG00000024140) #10	ZHX3 (ENSCHYG00000024334) #11	LPIN3 (ENSCHYG00000024362) #13	EMILIN3 (ENSCHYG00000024450) #14	CHD6 (ENSCHYG00000024491) #16	ENSCHYG00000024675 ##9	ENSCHYG00000024683	PTPRT (ENSCHYG00000024706) #20	ENSCHYG00000024755	SRSF6 (ENSCHYG00000024775) #21	L3MBTL1 (ENSCHYG00000024842) #22	SGK2 (ENSCHYG00000025099) #24	IFT52 (ENSCHYG00000025143) #25	MYBL2 (ENSCHYG00000025180) #26	GTSF1L (ENSCHYG00000025214)	ENSCHYG00000025224	ENSCHYG00000025230	TOX2 (ENSCHYG00000025247) #27	ENSCHYG00000025342 #29	ENSCHYG00000025358 #29	OSER1 (ENSCHYG00000025379) #30	GDAP1L1 (ENSCHYG00000025426) #31	R3HDML (ENSCHYG00000025480) #33	HNF4A (ENSCHYG00000025511) #34	TTPAL (ENSCHYG00000025633) #35	SERINC3 (ENSCHYG00000025651) #36
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448.cb.a #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448.cb.a #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448.cb.a #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448.cb.a #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Vaquita	MODERN SPECIES	6	ACTR5 (ENSPSNG00000005139)	PPP1R16B (ENSPSNG00000005014)	FAM83D (ENSPSNG00000004958)	DHX35 (ENSPSNG00000004869)	MAFB (ENSPSNG00000004723) #7	TOP1 (ENSPSNG00000004649) #8	PLCG1 (ENSPSNG00000004570) #10	ZHX3 (ENSPSNG00000022402) #11	LPIN3 (ENSPSNG00000022393) #13	EMILIN3 (ENSPSNG00000022386) #14	ENSPSNG00000022381	CHD6 (ENSPSNG00000022231) #16	ENSPSNG00000021952	PTPRT (ENSPSNG00000021673) #20	ENSPSNG00000021543 #21	L3MBTL1 (ENSPSNG00000021343) #22	SGK2 (ENSPSNG00000021169) #24	IFT52 (ENSPSNG00000021119) #25	MYBL2 (ENSPSNG00000021046) #26	GTSF1L (ENSPSNG00000021014)	TOX2 (ENSPSNG00000020877) #27	JPH2 (ENSPSNG00000020807) #29	OSER1 (ENSPSNG00000020770) #30	GDAP1L1 (ENSPSNG00000020674) #31	FITM2 (ENSPSNG00000020629) #32	R3HDML (ENSPSNG00000020593) #33	HNF4A (ENSPSNG00000020254) #34	ENSPSNG00000020129	TTPAL (ENSPSNG00000020103) #35	SERINC3 (ENSPSNG00000020048) #36	PKIG (ENSPSNG00000020022)
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448.cb.a #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Beluga whale	MODERN SPECIES	36	ACTR5 (ENSDLEG00000004209)	PPP1R16B (ENSDLEG00000004202)	DHX35 (ENSDLEG00000004147)	MAFB (ENSDLEG00000004111) #7	TOP1 (ENSDLEG00000004091) #8	PLCG1 (ENSDLEG00000003983) #10	ZHX3 (ENSDLEG00000003925) #11	ENSDLEG00000003909 #13	EMILIN3 (ENSDLEG00000003894) #14	ENSDLEG00000003884	CHD6 (ENSDLEG00000003279) #16	ENSDLEG00000003095	ENSDLEG00000003040	PTPRT (ENSDLEG00000002875) #20	SRSF6 (ENSDLEG00000002809) #21	L3MBTL1 (ENSDLEG00000002700) #22	SGK2 (ENSDLEG00000002651) #24	IFT52 (ENSDLEG00000002630) #25	MYBL2 (ENSDLEG00000002584) #26	GTSF1L (ENSDLEG00000002575)	TOX2 (ENSDLEG00000002555) #27	JPH2 (ENSDLEG00000002541) #29	OSER1 (ENSDLEG00000002525) #30	GDAP1L1 (ENSDLEG00000002417) #31	FITM2 (ENSDLEG00000002398) #32	R3HDML (ENSDLEG00000002389) #33	HNF4A (ENSDLEG00000002365) #34	ENSDLEG00000002342	TTPAL (ENSDLEG00000002331) #35	SERINC3 (ENSDLEG00000002319) #36	PKIG (ENSDLEG00000002304)
Narwhal	MODERN SPECIES	299	FAM83D (ENSMMNG00015002402)	DHX35 (ENSMMNG00015002344)	MAFB (ENSMMNG00015002292) #7	TOP1 (ENSMMNG00015002250) #8	PLCG1 (ENSMMNG00015002185) #10	ZHX3 (ENSMMNG00015002161) #11	LPIN3 (ENSMMNG00015002107) #13	EMILIN3 (ENSMMNG00015002078) #14	ENSMMNG00015002059	CHD6 (ENSMMNG00015001972) #16	ENSMMNG00015001923	ENSMMNG00015001814 #20	ENSMMNG00015001766	ENSMMNG00015001745 #20	SRSF6 (ENSMMNG00015001724) #21	L3MBTL1 (ENSMMNG00015001567) #22	SGK2 (ENSMMNG00015001467) #24	IFT52 (ENSMMNG00015001421) #25	MYBL2 (ENSMMNG00015001371) #26	GTSF1L (ENSMMNG00015001339)	TOX2 (ENSMMNG00015001270) #27	JPH2 (ENSMMNG00015001214) #29	OSER1 (ENSMMNG00015001194) #30	GDAP1L1 (ENSMMNG00015001155) #31	FITM2 (ENSMMNG00015001121) #32	R3HDML (ENSMMNG00015001100) #33	HNF4A (ENSMMNG00015000993) #34	ENSMMNG00015000884	TTPAL (ENSMMNG00015000844) #35	SERINC3 (ENSMMNG00015000816) #36	PKIG (ENSMMNG00015000796)
Dolphin	MODERN SPECIES	3917																L3MBTL1 (ENSTTRG00000012844) #22
Sperm whale	MODERN SPECIES	39														GTSF1L (ENSPCTG00005022204)	MYBL2 (ENSPCTG00005022190) #26	L3MBTL1 (ENSPCTG00005022139) #22	SGK2 (ENSPCTG00005022129) #24	IFT52 (ENSPCTG00005022111) #25
Blue whale	MODERN SPECIES	6	FAM83D (ENSBMSG00010021077)	DHX35 (ENSBMSG00010021036)	MAFB (ENSBMSG00010021010) #7	TOP1 (ENSBMSG00010021001) #8	PLCG1 (ENSBMSG00010020965) #10	ZHX3 (ENSBMSG00010020946) #11	LPIN3 (ENSBMSG00010020902) #13	EMILIN3 (ENSBMSG00010020889) #14	ENSBMSG00010020873 #16	ENSBMSG00010020848	ENSBMSG00010020836	ENSBMSG00010020830	ENSBMSG00010020822	PTPRT (ENSBMSG00010018488) #20	ENSBMSG00010018358 #21	L3MBTL1 (ENSBMSG00010018015) #22	SGK2 (ENSBMSG00010017835) #24	IFT52 (ENSBMSG00010017791) #25	MYBL2 (ENSBMSG00010017683) #26	GTSF1L (ENSBMSG00010017640)	TOX2 (ENSBMSG00010017480) #27	JPH2 (ENSBMSG00010017425) #29	OSER1 (ENSBMSG00010017402) #30	GDAP1L1 (ENSBMSG00010017283) #31	FITM2 (ENSBMSG00010017252) #32	R3HDML (ENSBMSG00010017217) #33	HNF4A (ENSBMSG00010017052) #34	ENSBMSG00010016983	TTPAL (ENSBMSG00010016961) #35	SERINC3 (ENSBMSG00010016919) #36	PKIG (ENSBMSG00010016891)
Camelidae	ANCESTRAL SPECIES	10	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b	ENSGT00940000160207
Arabian camel	MODERN SPECIES	10	ADIG (ENSCDRG00005008020)	SLC32A1 (ENSCDRG00005008052)	ACTR5 (ENSCDRG00005008072)	PPP1R16B (ENSCDRG00005008166)	FAM83D (ENSCDRG00005008292)	DHX35 (ENSCDRG00005008403)	MAFB (ENSCDRG00005009652) #7	TOP1 (ENSCDRG00005009676) #8	PLCG1 (ENSCDRG00005009801) #10	ZHX3 (ENSCDRG00005009932) #11	LPIN3 (ENSCDRG00005010005) #13	EMILIN3 (ENSCDRG00005010213) #14	CHD6 (ENSCDRG00005010313) #16	PTPRT (ENSCDRG00005010508) #20	SRSF6 (ENSCDRG00005011701) #21	L3MBTL1 (ENSCDRG00005011882) #22	SGK2 (ENSCDRG00005011945) #24	IFT52 (ENSCDRG00005012116) #25	MYBL2 (ENSCDRG00005012214) #26	TOX2 (ENSCDRG00005012649) #27	ENSCDRG00005012786 #29	ENSCDRG00005012819 #29	OSER1 (ENSCDRG00005012849) #30	GDAP1L1 (ENSCDRG00005012897) #31	FITM2 (ENSCDRG00005013002) #32	R3HDML (ENSCDRG00005013060) #33	HNF4A (ENSCDRG00005013135) #34	TTPAL (ENSCDRG00005013397) #35	SERINC3 (ENSCDRG00005013447) #36	PKIG (ENSCDRG00005013493)	ADA (ENSCDRG00005013531)
Suina	ANCESTRAL SPECIES	9	ENSGT00390000018723	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006.k #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Pig	MODERN SPECIES	8	ADIG (ENSSSCG00000007346)	SLC32A1 (ENSSSCG00000007348)	ACTR5 (ENSSSCG00000007349)	PPP1R16B (ENSSSCG00000007350)	FAM83D (ENSSSCG00000007351)	DHX35 (ENSSSCG00000007352)	MAFB (ENSSSCG00000058919) #7	ENSSSCG00000007355 #8	PLCG1 (ENSSSCG00000007356) #10	ZHX3 (ENSSSCG00000032566) #11	LPIN3 (ENSSSCG00000007359) #13	EMILIN3 (ENSSSCG00000007358) #14	CHD6 (ENSSSCG00000007360) #16	PTPRT (ENSSSCG00000038990) #20	SRSF6 (ENSSSCG00000007362) #21	L3MBTL1 (ENSSSCG00000055642) #22	SGK2 (ENSSSCG00000024325) #24	IFT52 (ENSSSCG00000007364) #25	MYBL2 (ENSSSCG00000007366) #26	GTSF1L (ENSSSCG00000007367)	TOX2 (ENSSSCG00000022202) #27	ENSSSCG00000007369 #29	ENSSSCG00000031692 #29	OSER1 (ENSSSCG00000022714) #30	GDAP1L1 (ENSSSCG00000007373) #31	FITM2 (ENSSSCG00000037912) #32	R3HDML (ENSSSCG00000007370) #33	HNF4A (ENSSSCG00000007371) #34	TTPAL (ENSSSCG00000036684) #35	SERINC3 (ENSSSCG00000039591) #36	PKIG (ENSSSCG00000022998)
Chacoan peccary	MODERN SPECIES	801	ADIG (ENSCWAG00000011065)	SLC32A1 (ENSCWAG00000010990)	ACTR5 (ENSCWAG00000010910)	PPP1R16B (ENSCWAG00000010757)	FAM83D (ENSCWAG00000010706)	DHX35 (ENSCWAG00000010048)	MAFB (ENSCWAG00000009982) #7	TOP1 (ENSCWAG00000009868) #8	PLCG1 (ENSCWAG00000009488) #10	ZHX3 (ENSCWAG00000009444) #11	LPIN3 (ENSCWAG00000009197) #13	EMILIN3 (ENSCWAG00000009144) #14	CHD6 (ENSCWAG00000008842) #16	PTPRT (ENSCWAG00000006883) #20	SRSF6 (ENSCWAG00000006760) #21	L3MBTL1 (ENSCWAG00000006408) #22	SGK2 (ENSCWAG00000006284) #24	IFT52 (ENSCWAG00000006250) #25	MYBL2 (ENSCWAG00000006069) #26	GTSF1L (ENSCWAG00000006050)	TOX2 (ENSCWAG00000005926) #27	JPH2 (ENSCWAG00000005899) #29	OSER1 (ENSCWAG00000005878) #30	GDAP1L1 (ENSCWAG00000005778) #31	FITM2 (ENSCWAG00000005743) #32	R3HDML (ENSCWAG00000005706) #33	HNF4A (ENSCWAG00000005361) #34	TTPAL (ENSCWAG00000005304) #35	SERINC3 (ENSCWAG00000005269) #36	PKIG (ENSCWAG00000005238)	ADA (ENSCWAG00000005205)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159708 #22
Common shrew	MODERN SPECIES	6058																ENSSARG00000011953 #22
Hedgehog	MODERN SPECIES	7713																L3MBTL1 (ENSEEUG00000006232) #22
Atlantogenata	ANCESTRAL SPECIES	6	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Xenarthra	ANCESTRAL SPECIES	1150																ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26
Armadillo	MODERN SPECIES	3289																ENSDNOG00000040451 #22	SGK2 (ENSDNOG00000012703) #24	IFT52 (ENSDNOG00000012952) #25	ENSDNOG00000031029	GTSF1L (ENSDNOG00000003520)
Sloth	MODERN SPECIES	6804																ENSCHOG00000005052 #22
Afrotheria	ANCESTRAL SPECIES	3	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Tenrec	MODERN SPECIES	7601																ENSETEG00000013916 #22
Afrotheria_a	ANCESTRAL SPECIES	3	ENSGT00940000162174	ENSGT00490000043380	ENSGT00720000108866	ENSGT00940000154090.b	ENSGT00940000158405	ENSGT00940000156142	ENSGT00940000160486 #7	ENSGT00940000155006 #8	ENSGT00940000158901 #10	ENSGT00950000182893.a.a.b #11	ENSGT00940000160046 #13	ENSGT01030000234633.B.b #14	ENSGT00940000158986 #16	ENSGT00940000155326 #20	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153776.a.b #24	ENSGT00390000011581 #25	ENSGT00940000156091.b #26	ENSGT00940000163226	ENSGT00940000158764 #27	ENSGT00940000159411.b #29	ENSGT00390000018547 #30	ENSGT00940000160178 #31	ENSGT00530000063693.b #32	ENSGT00940000161086 #33	ENSGT00940000157965 #34	ENSGT00940000155407 #35	ENSGT01030000234623.a.a.a.a.a #36	ENSGT00390000002707	ENSGT00950000183113.a.b
Elephant	MODERN SPECIES	180	ACTR5 (ENSLAFG00000006895)	PPP1R16B (ENSLAFG00000006730)	FAM83D (ENSLAFG00000026634)	DHX35 (ENSLAFG00000004103)	MAFB (ENSLAFG00000006958) #7	TOP1 (ENSLAFG00000011045) #8	PLCG1 (ENSLAFG00000004405) #10	ZHX3 (ENSLAFG00000022196) #11	ENSLAFG00000028674	LPIN3 (ENSLAFG00000018105) #13	EMILIN3 (ENSLAFG00000018123) #14	CHD6 (ENSLAFG00000012144) #16	ENSLAFG00000013609 #20	ENSLAFG00000032478 #20	SRSF6 (ENSLAFG00000006682) #21	L3MBTL1 (ENSLAFG00000012575) #22	SGK2 (ENSLAFG00000006689) #24	IFT52 (ENSLAFG00000006693) #25	MYBL2 (ENSLAFG00000006698) #26	GTSF1L (ENSLAFG00000008405)	TOX2 (ENSLAFG00000003055) #27	JPH2 (ENSLAFG00000001725) #29	OSER1 (ENSLAFG00000009141) #30	GDAP1L1 (ENSLAFG00000015604) #31	FITM2 (ENSLAFG00000015606) #32	R3HDML (ENSLAFG00000015610) #33	HNF4A (ENSLAFG00000022279) #34	TTPAL (ENSLAFG00000001411) #35	SERINC3 (ENSLAFG00000001413) #36	PKIG (ENSLAFG00000028456)	ADA (ENSLAFG00000003020)
Hyrax	MODERN SPECIES	6390																L3MBTL1 (ENSPCAG00000013248) #22
Marsupialia	ANCESTRAL SPECIES	9	ENSGT00940000154258.a	ENSGT00390000001804	ENSGT00940000157601	ENSGT00940000155266.x	ENSGT00940000154663	ENSGT00390000000546	ENSGT00390000001562	ENSGT00940000159472	ENSGT00950000183131.a	ENSGT00940000162922	ENSGT00390000013020	ENSGT00950000183176.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764 #27	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153137.a.b.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00940000158554	ENSGT00940000157465.a	ENSGT00940000159358	ENSGT00420000029848.A	ENSGT00940000158327	ENSGT00940000156413	ENSGT00940000158978	ENSGT00940000161005	ENSGT00940000160245
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00950000182981.a.g	ENSGT00940000154258.a	ENSGT00390000001804	ENSGT00940000157601	ENSGT00940000154663	ENSGT00940000155266.x	ENSGT00390000000546	ENSGT00390000001562	ENSGT00940000159472	ENSGT00950000183131.a	ENSGT00940000162922	ENSGT00950000183176.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764 #27	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153137.a.b.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00940000158554	ENSGT00940000157465.a	ENSGT00940000159358	ENSGT00420000029848.A	ENSGT00940000158327	ENSGT00940000156413	ENSGT00940000158978	ENSGT00940000161005	ENSGT00940000160245
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000157014	ENSGT00950000182981.a.g	ENSGT00940000154258.a	ENSGT00390000001804	ENSGT00940000157601.x.a	ENSGT00940000155266.x	ENSGT00390000000546	ENSGT00390000001562	ENSGT00940000159472	ENSGT00950000183131.a	ENSGT00940000162922	ENSGT00950000183176.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764 #27	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153137.a.b.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00940000158554	ENSGT00940000157465.a	ENSGT00940000159358	ENSGT00420000029848.A	ENSGT00940000158327	ENSGT00940000156413	ENSGT00940000158978	ENSGT00940000161005	ENSGT00940000160245
Wallaby	MODERN SPECIES	9915																ENSMEUG00000000788 #22
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000154258.a	ENSGT00390000001804	ENSGT00940000157601.x.a	ENSGT00940000157601.x.b	ENSGT00940000154663	ENSGT00940000155266.x	ENSGT00390000000546	ENSGT00390000001562	ENSGT00940000159472	ENSGT00950000183131.a	ENSGT00940000162922	ENSGT00950000183176.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764 #27	ENSGT00940000155448 #21	ENSGT00940000159708 #22	ENSGT00940000153137.a.b.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT00940000158554	ENSGT00940000157465.a	ENSGT00940000159358	ENSGT00420000029848.A	ENSGT00940000158327	ENSGT00940000156413	ENSGT00940000158978	ENSGT00940000161005	ENSGT00940000160245
Common wonbat	MODERN SPECIES	1023	AHCY (ENSVURG00010019234)	ASIP (ENSVURG00010019239)	EIF2S2 (ENSVURG00010019246)	ENSVURG00010019251	CHMP4B (ENSVURG00010019263)	ENSVURG00010019269	ZNF341 (ENSVURG00010019277)	PXMP4 (ENSVURG00010019297)	E2F1 (ENSVURG00010019304)	NECAB3 (ENSVURG00010019324)	ACTL10 (ENSVURG00010019341)	CBFA2T2 (ENSVURG00010019347)	SNTA1 (ENSVURG00010019377)	TOX2 (ENSVURG00010019590) #27	SRSF6 (ENSVURG00010019601) #21	L3MBTL1 (ENSVURG00010019617) #22	CANX (ENSVURG00010019632)	MAML1 (ENSVURG00010019659)	SQSTM1 (ENSVURG00010019670)	TBC1D9B (ENSVURG00010019683)	RNF130 (ENSVURG00010019705)	FLT4 (ENSVURG00010019743)	ENSVURG00010019769	MAPK9 (ENSVURG00010019784)	GFPT2 (ENSVURG00010019801)	CNOT6 (ENSVURG00010019814)	RASGEF1C (ENSVURG00010019833)	CLK4 (ENSVURG00010019863)	ENSVURG00010019893	PHYKPL (ENSVURG00010019924)	HNRNPAB (ENSVURG00010000096)
koala	MODERN SPECIES	74	ENSPCIG00000028158	ASIP (ENSPCIG00000028159)	EIF2S2 (ENSPCIG00000011155)	ENSPCIG00000011153	CHMP4B (ENSPCIG00000005848)	ENSPCIG00000005849	ZNF341 (ENSPCIG00000005844)	PXMP4 (ENSPCIG00000005843)	E2F1 (ENSPCIG00000005835)	NECAB3 (ENSPCIG00000005831)	ENSPCIG00000005833	ENSPCIG00000005830	SNTA1 (ENSPCIG00000005829)	TOX2 (ENSPCIG00000005825) #27	SRSF6 (ENSPCIG00000003820) #21	L3MBTL1 (ENSPCIG00000003824) #22	ENSPCIG00000033556	CANX (ENSPCIG00000003888)	MAML1 (ENSPCIG00000003902)	ENSPCIG00000003908	MGAT4B (ENSPCIG00000003915)	SQSTM1 (ENSPCIG00000003936)	TBC1D9B (ENSPCIG00000003952)	ENSPCIG00000003992	FLT4 (ENSPCIG00000004027)	ENSPCIG00000004056	MAPK9 (ENSPCIG00000004062)	GFPT2 (ENSPCIG00000004080)	CNOT6 (ENSPCIG00000020319)	RASGEF1C (ENSPCIG00000018198)	CLK4 (ENSPCIG00000018201)
Tasmanian devil	MODERN SPECIES	1	AHCY (ENSSHAG00000031421)	ENSSHAG00000031644	EIF2S2 (ENSSHAG00000029026)	ENSSHAG00000022710	ENSSHAG00000026098	ENSSHAG00000022664	ZNF341 (ENSSHAG00000022447)	PXMP4 (ENSSHAG00000029249)	ENSSHAG00000023415	E2F1 (ENSSHAG00000029215)	ENSSHAG00000023391	ENSSHAG00000024966	ENSSHAG00000015173	ENSSHAG00000013874 #27	ENSSHAG00000012805 #21	ENSSHAG00000028809 #22	ENSSHAG00000011510	MAML1 (ENSSHAG00000011151)	LTC4S (ENSSHAG00000025649)	MGAT4B (ENSSHAG00000010968)	SQSTM1 (ENSSHAG00000025384)	ENSSHAG00000009809	ENSSHAG00000008447	ENSSHAG00000007344	ENSSHAG00000006299	MAPK9 (ENSSHAG00000005542)	ENSSHAG00000004019	ENSSHAG00000017436	ENSSHAG00000016960	COL23A1 (ENSSHAG00000015949)	PHYKPL (ENSSHAG00000015838)
Opossum	MODERN SPECIES		EIF2S2 (ENSMODG00000002805)	RALY (ENSMODG00000002819)	ENSMODG00000002836	CHMP4B (ENSMODG00000002830)	ZNF341 (ENSMODG00000002856)	PXMP4 (ENSMODG00000002864)	E2F1 (ENSMODG00000002875)	ENSMODG00000002988	ENSMODG00000002993	NECAB3 (ENSMODG00000002977)	CBFA2T2 (ENSMODG00000003023)	SNTA1 (ENSMODG00000003050)	TOX2 (ENSMODG00000003070) #27	ENSMODG00000023076	SRSF6 (ENSMODG00000003107) #21	L3MBTL1 (ENSMODG00000003647) #22	ENSMODG00000003673	ENSMODG00000003708	MAML1 (ENSMODG00000003725)	LTC4S (ENSMODG00000003733)	MGAT4B (ENSMODG00000003778)	SQSTM1 (ENSMODG00000003806)	TBC1D9B (ENSMODG00000003882)	ENSMODG00000003904	FLT4 (ENSMODG00000003918)	ENSMODG00000003922	MAPK9 (ENSMODG00000003946)	GFPT2 (ENSMODG00000003969)	CNOT6 (ENSMODG00000003979)	RASGEF1C (ENSMODG00000004052)	CLK4 (ENSMODG00000004119)
Platypus	MODERN SPECIES	19	ARFRP1 (ENSOANG00000043071)	ENSOANG00000004934	RTEL1 (ENSOANG00000004935)	STMN3 (ENSOANG00000004938)	GMEB2 (ENSOANG00000004939)	HELZ2 (ENSOANG00000043462)	ENSOANG00000004942	FNDC11 (ENSOANG00000041710)	RAB5IF (ENSOANG00000041680)	MYL9 (ENSOANG00000004944)	ENSOANG00000051253	DLGAP4 (ENSOANG00000004946)	ENSOANG00000038341	ENSOANG00000002758	SRSF6 (ENSOANG00000008955) #21	L3MBTL1 (ENSOANG00000014344) #22	TOX2 (ENSOANG00000014345) #27	RALGAPB (ENSOANG00000014346)	CHD6 (ENSOANG00000014347) #16	ENSOANG00000014348 #14	LPIN3 (ENSOANG00000014349) #13	PLCG1 (ENSOANG00000047399) #10	TOP1 (ENSOANG00000014354) #8	MAFB (ENSOANG00000044175) #7	DHX35 (ENSOANG00000015094)	FAM83D (ENSOANG00000044824)	PPP1R16B (ENSOANG00000049225)	ACTR5 (ENSOANG00000047752)	ENSOANG00000047255	ARHGAP40 (ENSOANG00000015092)	SLC32A1 (ENSOANG00000041271)