Mus_A	ANCESTRAL SPECIES	6										ENSGT00550000075006 #16	ENSGT00950000182788.a.b.b.b.e #17	ENSGT00950000183061.a.a.b.hb #18	ENSGT00950000183061.a.a.b.ib #19	ENSGT00940000157614 #20	ENSGT00940000157257 #21	ENSGT00940000161440 #22	ENSGT00940000161564 #23	ENSGT00390000003602 #24	ENSGT00390000012305.b #25	ENSGT00610000086058.b #26	ENSGT00940000158948.b #27	ENSGT00940000155499 #28	ENSGT00940000159635 #29	ENSGT00940000162967 #30	ENSGT00390000009484 #31	ENSGT00390000018451 #32	ENSGT00960000191336	ENSGT00940000158706 #33	ENSGT00390000002316 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #35	ENSGT00940000156630 #36
Mus_B	ANCESTRAL SPECIES	4										ENSGT00550000075006 #16	ENSGT00950000182788.a.b.b.b.e #17	ENSGT00950000183061.a.a.b.hb #18	ENSGT00950000183061.a.a.b.ib #19	ENSGT00940000157614 #20	ENSGT00940000157257 #21	ENSGT00940000161440 #22	ENSGT00940000161564 #23	ENSGT00390000003602 #24	ENSGT00390000012305.b #25	ENSGT00610000086058.b #26	ENSGT00940000158948.b #27	ENSGT00940000155499 #28	ENSGT00940000159635 #29	ENSGT00940000162967 #30	ENSGT00390000009484 #31	ENSGT00390000018451 #32	ENSGT00960000191336	ENSGT00940000158706 #33	ENSGT00390000002316 #34	ENSGT00950000183120.e.b.a.a.a.n ##35	ENSGT00940000156630 #36
Mus_C	ANCESTRAL SPECIES	4										ENSGT00550000075006 #16	ENSGT00950000182788.a.b.b.b.e #17	ENSGT00950000183061.a.a.b.hb #18	ENSGT00950000183061.a.a.b.ib #19	ENSGT00940000157614 #20	ENSGT00940000157257 #21	ENSGT00940000161440 #22	ENSGT00940000161564 #23	ENSGT00390000003602 #24	ENSGT00390000012305.b #25	ENSGT00610000086058.b #26	ENSGT00940000158948.b #27	ENSGT00940000155499 #28	ENSGT00940000159635 #29	ENSGT00940000162967 #30	ENSGT00390000009484 #31	ENSGT00390000018451 #32	ENSGT00960000191336	ENSGT00940000158706 #33	ENSGT00390000002316 #34	ENSGT00950000183120.e.b.a.a.a.n ##35	ENSGT00940000156630 #36
spretus	MODERN SPECIES	14										Rfc3 (MGP_SPRETEiJ_G0029066) #16	MGP_SPRETEiJ_G0029065 #17	MGP_SPRETEiJ_G0029064 #18	Stard13 (MGP_SPRETEiJ_G0029063) #19	Kl (MGP_SPRETEiJ_G0029062) #20	Pds5b (MGP_SPRETEiJ_G0029061) #21	N4bp2l2 (MGP_SPRETEiJ_G0029060) #22	N4bp2l1 (MGP_SPRETEiJ_G0029059) #23	Brca2 (MGP_SPRETEiJ_G0029058) #24	Zar1l (MGP_SPRETEiJ_G0029057) #25	Fry (MGP_SPRETEiJ_G0029056) #26	Rxfp2 (MGP_SPRETEiJ_G0029055) #27	B3glct (MGP_SPRETEiJ_G0029054) #28	Hsph1 (MGP_SPRETEiJ_G0029053) #29	Wdr95 (MGP_SPRETEiJ_G0029052) #30	Tex26 (MGP_SPRETEiJ_G0029051) #31	Medag (MGP_SPRETEiJ_G0029050) #32	Alox5ap (MGP_SPRETEiJ_G0029049) #33	Uspl1 (MGP_SPRETEiJ_G0029048) #34	MGP_SPRETEiJ_G0029047 #35	MGP_SPRETEiJ_G0029046 #36	MGP_SPRETEiJ_G0029045 #37
Steppe mouse	MODERN SPECIES	3364										Rfc3 (ENSMSIG00000021769) #16	Vmn2r18 (ENSMSIG00000021788) #17	Stard13 (ENSMSIG00000021835) #19	Kl (ENSMSIG00000021957) #20	Pds5b (ENSMSIG00000021971) #21	ENSMSIG00000022219	ENSMSIG00000022244 #22	ENSMSIG00000022281 #23	Brca2 (ENSMSIG00000022300) #24	Zar1l (ENSMSIG00000022351) #25	Fry (ENSMSIG00000022362) #26	Rxfp2 (ENSMSIG00000022574) #27	B3glct (ENSMSIG00000022847) #28	ENSMSIG00000022866	Hsph1 (ENSMSIG00000022895) #29	Wdr95 (ENSMSIG00000023065) #30	Tex26 (ENSMSIG00000023128) #31	Medag (ENSMSIG00000023188) #32	ENSMSIG00000023226	Alox5ap (ENSMSIG00000023243) #33	Uspl1 (ENSMSIG00000023285) #34	ENSMSIG00000023332 ##35
Mouse	MODERN SPECIES	14										Rfc3 (ENSMUSG00000033970) #16	Vmn2r18 (ENSMUSG00000091794) #17	Gm42906 (ENSMUSG00000107011)	Stard13 (ENSMUSG00000016128) #19	Kl (ENSMUSG00000058488) #20	Pds5b (ENSMUSG00000034021) #21	N4bp2l2 (ENSMUSG00000029655) #22	N4bp2l1 (ENSMUSG00000041132) #23	Brca2 (ENSMUSG00000041147) #24	Zar1l (ENSMUSG00000056586) #25	Fry (ENSMUSG00000056602) #26	Rxfp2 (ENSMUSG00000053368) #27	B3glct (ENSMUSG00000051950) #28	Hsph1 (ENSMUSG00000029657) #29	Wdr95 (ENSMUSG00000029658) #30	Tex26 (ENSMUSG00000029660) #31	Medag (ENSMUSG00000029659) #32	Alox5ap (ENSMUSG00000060063) #33	Uspl1 (ENSMUSG00000041264) #34	Hmgb1 (ENSMUSG00000066551) ##35	Katnal1 (ENSMUSG00000041298) #36	Ubl3 (ENSMUSG00000001687)
Ryukyu mouse	MODERN SPECIES	14											Rfc3 (MGP_CAROLIEiJ_G0028067) #16	MGP_CAROLIEiJ_G0028066 #18	Stard13 (MGP_CAROLIEiJ_G0028065) #19	Kl (MGP_CAROLIEiJ_G0028064) #20	Pds5b (MGP_CAROLIEiJ_G0028063) #21	N4bp2l2 (MGP_CAROLIEiJ_G0028062) #22	N4bp2l1 (MGP_CAROLIEiJ_G0028061) #23	Brca2 (MGP_CAROLIEiJ_G0028060) #24	Zar1l (MGP_CAROLIEiJ_G0028059) #25	MGP_CAROLIEiJ_G0028058 #26	Rxfp2 (MGP_CAROLIEiJ_G0028057) #27	B3glct (MGP_CAROLIEiJ_G0028056) #28	Hsph1 (MGP_CAROLIEiJ_G0028055) #29	Wdr95 (MGP_CAROLIEiJ_G0028054) #30	Tex26 (MGP_CAROLIEiJ_G0028053) #31	Medag (MGP_CAROLIEiJ_G0028052) #32	MGP_CAROLIEiJ_G0028051 #33	Uspl1 (MGP_CAROLIEiJ_G0028050) #34	MGP_CAROLIEiJ_G0028049 #35	MGP_CAROLIEiJ_G0028048 #36	MGP_CAROLIEiJ_G0028047 #36