Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000160272 #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000160272 #22
Euteleostomi	ANCESTRAL SPECIES	628														ENSGT00940000159697	ENSGT00940000153062.A	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24
Sarcopterygii	ANCESTRAL SPECIES	561														ENSGT00940000159697	ENSGT00940000153062.A	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24
Tetrapoda	ANCESTRAL SPECIES	278														ENSGT00940000159697	ENSGT00940000153062.A.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24
Amniota	ANCESTRAL SPECIES	72	ENSGT01020000230346.D	ENSGT00940000161007	ENSGT00390000018560.a.b	ENSGT00940000159697	ENSGT00940000153062.A.a	ENSGT00950000183058.B #11	ENSGT00530000063991.b #10	ENSGT01100000263535.a.b #14	ENSGT01100000263571	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a #18	ENSGT00990000203527.a.b ##18	ENSGT00940000160704.b #12	ENSGT00960000187889	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24
Mammalia	ANCESTRAL SPECIES	90	ENSGT00940000159697	ENSGT00940000159269.g.a	ENSGT00940000165494	ENSGT00940000153062.A.a	ENSGT00940000162018 #7	ENSGT00980000200079	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00960000187889	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a #18	ENSGT01000000220874	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00940000160881 #31	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986	ENSGT00940000155110	ENSGT00390000006265.a
Theria	ANCESTRAL SPECIES	47	ENSGT00940000153062.A.b.a	ENSGT00940000167486	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00960000187889	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986	ENSGT00940000155110
Eutheria	ANCESTRAL SPECIES	28	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Primates	ANCESTRAL SPECIES	28	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Strepsirrhini	ANCESTRAL SPECIES	36	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055.a #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Lemuriformes	ANCESTRAL SPECIES	29	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT01070000256191	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055.a #28	ENSGT00940000162407 #29	ENSGT00940000156204.q.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Lemuriformes_a	ANCESTRAL SPECIES	56	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT01070000256191	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055.a #28	ENSGT00940000162407 #29	ENSGT00940000156204.q.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Greater bamboo lemur	MODERN SPECIES	171	ENSPSMG00000024226 #7	ENSPSMG00000024235 #8	ENSPSMG00000024241 #9	FAM187B (ENSPSMG00000024248) #10	LSR (ENSPSMG00000024268) #11	USF2 (ENSPSMG00000024322) #12	HAMP (ENSPSMG00000024351) #13	MAG (ENSPSMG00000024374) #14	CD22 (ENSPSMG00000024401) #15	FFAR1 (ENSPSMG00000024411) #16	ENSPSMG00000024412 #17	FFAR2 (ENSPSMG00000024415) #18	KRTDAP (ENSPSMG00000024422) #19	ENSPSMG00000024428 #20	ENSPSMG00000024431 #21	GAPDHS (ENSPSMG00000024441) #22	TMEM147 (ENSPSMG00000000061) #23	ATP4A (ENSPSMG00000000149) #24	ENSPSMG00000000165 #25	PMIS2 (ENSPSMG00000000179) #26	HAUS5 (ENSPSMG00000000239) #27	RBM42 (ENSPSMG00000000435) #28	ENSPSMG00000000542 #29	ENSPSMG00000000547 #30	UPK1A (ENSPSMG00000000559) #31	ZBTB32 (ENSPSMG00000000574) #32	KMT2B (ENSPSMG00000000623) #33	ENSPSMG00000000640 #34	U2AF1L4 (ENSPSMG00000000642) #35	PSENEN (ENSPSMG00000000652) #36	ENSPSMG00000000658 #37
Coquerels sifaka	MODERN SPECIES	501	LGI4 (ENSPCOG00000024342) #7	FXYD1 (ENSPCOG00000026055)	ENSPCOG00000020263 #8	ENSPCOG00000022433 #9	FAM187B (ENSPCOG00000023001) #10	LSR (ENSPCOG00000012778) #11	USF2 (ENSPCOG00000019868) #12	HAMP (ENSPCOG00000021510) #13	MAG (ENSPCOG00000019754) #14	CD22 (ENSPCOG00000024291) #15	ENSPCOG00000007499 #17	KRTDAP (ENSPCOG00000017277) #19	ENSPCOG00000022563 #20	ENSPCOG00000011887	ENSPCOG00000007626 #21	GAPDHS (ENSPCOG00000007595) #22	TMEM147 (ENSPCOG00000022068) #23	ATP4A (ENSPCOG00000015033) #24	HAUS5 (ENSPCOG00000006513) #27	RBM42 (ENSPCOG00000026433) #28	ENSPCOG00000020672 ##28	ENSPCOG00000022130 #29	COX6B1 (ENSPCOG00000008773) #30	UPK1A (ENSPCOG00000016896) #31	ZBTB32 (ENSPCOG00000003160) #32	KMT2B (ENSPCOG00000022594) #33	ENSPCOG00000013398 #34	U2AF1L4 (ENSPCOG00000007736) #35	PSENEN (ENSPCOG00000017025) #36	LIN37 (ENSPCOG00000019985)	HSPB6 (ENSPCOG00000001726)
Mouse lemur	MODERN SPECIES	14	LGI4 (ENSMICG00000031932) #7	FXYD1 (ENSMICG00000044936)	FXYD7 (ENSMICG00000046315)	FXYD5 (ENSMICG00000027294)	FAM187B (ENSMICG00000044100) #10	LSR (ENSMICG00000001514) #11	USF2 (ENSMICG00000001519) #12	HAMP (ENSMICG00000026832) #13	MAG (ENSMICG00000027039) #14	CD22 (ENSMICG00000001531) #15	ENSMICG00000032323 #17	KRTDAP (ENSMICG00000001542) #19	ENSMICG00000045840 #20	ENSMICG00000042273	ENSMICG00000042629 #21	GAPDHS (ENSMICG00000010889) #22	TMEM147 (ENSMICG00000010909) #23	ATP4A (ENSMICG00000009844) #24	PMIS2 (ENSMICG00000046169) #26	HAUS5 (ENSMICG00000009861) #27	RBM42 (ENSMICG00000009880) #28	ENSMICG00000009896 #29	ENSMICG00000047436 #30	UPK1A (ENSMICG00000009905) #31	ZBTB32 (ENSMICG00000045992) #32	KMT2B (ENSMICG00000009928) #33	U2AF1L4 (ENSMICG00000009981) #35	IGFLR1 (ENSMICG00000032696) #34	PSENEN (ENSMICG00000033711) #36	LIN37 (ENSMICG00000009987)	HSPB6 (ENSMICG00000046456)
Bushbaby	MODERN SPECIES	215	HPN (ENSOGAG00000003239)	LGI4 (ENSOGAG00000003235) #7	ENSOGAG00000014401	FXYD5 (ENSOGAG00000029332)	FAM187B (ENSOGAG00000003244) #10	LSR (ENSOGAG00000001474) #11	USF2 (ENSOGAG00000001476) #12	MAG (ENSOGAG00000027636) #14	CD22 (ENSOGAG00000006215) #15	FFAR1 (ENSOGAG00000001480) #16	ENSOGAG00000001481 #17	FFAR2 (ENSOGAG00000027243) #18	KRTDAP (ENSOGAG00000001491) #19	DMKN (ENSOGAG00000001492)	ENSOGAG00000001494 #21	GAPDHS (ENSOGAG00000009491) #22	TMEM147 (ENSOGAG00000009495) #23	ATP4A (ENSOGAG00000027922) #24	HAUS5 (ENSOGAG00000004143) #27	RBM42 (ENSOGAG00000004144) #28	ETV2 (ENSOGAG00000004145) #29	COX6B1 (ENSOGAG00000004148) #30	UPK1A (ENSOGAG00000004150) #31	ZBTB32 (ENSOGAG00000004155) #32	KMT2B (ENSOGAG00000004157) #33	IGFLR1 (ENSOGAG00000024807) #34	PSENEN (ENSOGAG00000004171) #36	LIN37 (ENSOGAG00000004172)	HSPB6 (ENSOGAG00000004176)	ENSOGAG00000026423	ARHGAP33 (ENSOGAG00000004179)
Haplorrhini	ANCESTRAL SPECIES	35	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000153062.C	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Hominidae	ANCESTRAL SPECIES		ENSGT00940000153062.C	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b.g.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Gorilla	MODERN SPECIES	10	FXYD5 (ENSGGOG00000005263)	FAM187B (ENSGGOG00000025979) #10	LSR (ENSGGOG00000000766) #11	USF2 (ENSGGOG00000000767) #12	HAMP (ENSGGOG00000000768) #13	MAG (ENSGGOG00000014564) #14	CD22 (ENSGGOG00000009101) #15	FFAR1 (ENSGGOG00000009118) #16	ENSGGOG00000042677 #17	ENSGGOG00000040333 #17	ENSGGOG00000042155	FFAR2 (ENSGGOG00000005874) #18	KRTDAP (ENSGGOG00000000770) #19	ENSGGOG00000015727	SBSN (ENSGGOG00000000126) #21	GAPDHS (ENSGGOG00000000127) #22	TMEM147 (ENSGGOG00000000129) #23	ATP4A (ENSGGOG00000000130) #24	PMIS2 (ENSGGOG00000040800) #26	RBM42 (ENSGGOG00000009972) #28	ETV2 (ENSGGOG00000009978) #29	COX6B1 (ENSGGOG00000004768) #30	ENSGGOG00000004770 #31	ZBTB32 (ENSGGOG00000016789) #32	KMT2B (ENSGGOG00000016796) #33	IGFLR1 (ENSGGOG00000016821) #34	ENSGGOG00000016828 #35	PSENEN (ENSGGOG00000016831) #36	LIN37 (ENSGGOG00000016834)	HSPB6 (ENSGGOG00000016841)	ENSGGOG00000016847
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b.h #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Pan	ANCESTRAL SPECIES	32	ENSGT00940000153062.C	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b.g.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986
Chimpanzee	MODERN SPECIES	10	FXYD5 (ENSPTRG00000010833) #9	ENSPTRG00000049764	FAM187B (ENSPTRG00000010834) #10	LSR (ENSPTRG00000010835) #11	USF2 (ENSPTRG00000010836) #12	HAMP (ENSPTRG00000010837) #13	MAG (ENSPTRG00000024187) #14	CD22 (ENSPTRG00000010840) #15	FFAR1 (ENSPTRG00000010841) #16	ENSPTRG00000029043 #17	ENSPTRG00000010842 #17	FFAR2 (ENSPTRG00000010844) #18	KRTDAP (ENSPTRG00000010845) #19	DMKN (ENSPTRG00000044199)	SBSN (ENSPTRG00000010847) #21	GAPDHS (ENSPTRG00000010848) #22	TMEM147 (ENSPTRG00000010849) #23	ATP4A (ENSPTRG00000010850) #24	HAUS5 (ENSPTRG00000010851) #27	RBM42 (ENSPTRG00000010852) #28	ETV2 (ENSPTRG00000046312) #29	COX6B1 (ENSPTRG00000010854) #30	UPK1A (ENSPTRG00000010855) #31	ZBTB32 (ENSPTRG00000010857) #32	KMT2B (ENSPTRG00000010858) #33	IGFLR1 (ENSPTRG00000010859) #34	U2AF1L4 (ENSPTRG00000010860) #35	PSENEN (ENSPTRG00000029038) #36	LIN37 (ENSPTRG00000010861)	HSPB6 (ENSPTRG00000010864)	PROSER3 (ENSPTRG00000010865)
Bonobo	MODERN SPECIES	10	ENSPPAG00000028283 #8	FXYD5 (ENSPPAG00000040354)	ENSPPAG00000039787	FAM187B (ENSPPAG00000014317) #10	LSR (ENSPPAG00000027612) #11	ENSPPAG00000037664 #12	HAMP (ENSPPAG00000039823) #13	MAG (ENSPPAG00000031570) #14	CD22 (ENSPPAG00000037462) #15	FFAR1 (ENSPPAG00000026563) #16	ENSPPAG00000009644 #17	FFAR2 (ENSPPAG00000017858) #18	KRTDAP (ENSPPAG00000027931) #19	ENSPPAG00000039600	ENSPPAG00000038927 #21	GAPDHS (ENSPPAG00000000152) #22	TMEM147 (ENSPPAG00000039925) #23	ATP4A (ENSPPAG00000036769) #24	HAUS5 (ENSPPAG00000043383) #27	RBM42 (ENSPPAG00000037315) #28	ETV2 (ENSPPAG00000038607) #29	COX6B1 (ENSPPAG00000039850) #30	ENSPPAG00000010697 #31	ZBTB32 (ENSPPAG00000031211) #32	KMT2B (ENSPPAG00000038161) #33	ENSPPAG00000043269 #34	U2AF1L4 (ENSPPAG00000026285) #35	PSENEN (ENSPPAG00000032790) #36	LIN37 (ENSPPAG00000034832)	HSPB6 (ENSPPAG00000039409)	PROSER3 (ENSPPAG00000040527)
Human	MODERN SPECIES	10	FXYD7 (ENSG00000221946)	FXYD5 (ENSG00000089327)	FAM187B (ENSG00000177558) #10	LSR (ENSG00000105699) #11	USF2 (ENSG00000105698) #12	HAMP (ENSG00000105697) #13	MAG (ENSG00000105695) #14	CD22 (ENSG00000012124) #15	FFAR1 (ENSG00000126266) #16	FFAR3 (ENSG00000185897) #17	GPR42 (ENSG00000126251) #17	FFAR2 (ENSG00000126262) #18	KRTDAP (ENSG00000188508) #19	DMKN (ENSG00000161249)	SBSN (ENSG00000189001) #21	GAPDHS (ENSG00000105679) #22	TMEM147 (ENSG00000105677) #23	ATP4A (ENSG00000105675) #24	PMIS2 (ENSG00000283758) #26	HAUS5 (ENSG00000249115) #27	RBM42 (ENSG00000126254) #28	ETV2 (ENSG00000105672) #29	COX6B1 (ENSG00000126267) #30	UPK1A (ENSG00000105668) #31	ZBTB32 (ENSG00000011590) #32	KMT2B (ENSG00000272333) #33	IGFLR1 (ENSG00000126246) #34	U2AF1L4 (ENSG00000161265) #35	PSENEN (ENSG00000205155) #36	LIN37 (ENSG00000267796)	HSPB6 (ENSG00000004776)
Orangutan	MODERN SPECIES	10	ENSPPYG00000038386 #8	FXYD5 (ENSPPYG00000009852)	ENSPPYG00000041524 #10	LSR (ENSPPYG00000009854) #11	USF2 (ENSPPYG00000009855) #12	HAMP (ENSPPYG00000009856) #13	MAG (ENSPPYG00000009857) #14	CD22 (ENSPPYG00000009858) #15	FFAR1 (ENSPPYG00000009859) #16	ENSPPYG00000031088 #17	ENSPPYG00000031215 #17	FFAR2 (ENSPPYG00000009863) #18	KRTDAP (ENSPPYG00000009864) #19	DMKN (ENSPPYG00000009865)	ENSPPYG00000009866 #21	GAPDHS (ENSPPYG00000009867) #22	TMEM147 (ENSPPYG00000009868) #23	ATP4A (ENSPPYG00000009869) #24	PMIS2 (ENSPPYG00000037277) #26	HAUS5 (ENSPPYG00000009870) #27	RBM42 (ENSPPYG00000009871) #28	COX6B1 (ENSPPYG00000009872) #29	UPK1A (ENSPPYG00000009874) #31	ZBTB32 (ENSPPYG00000009876) #32	IGFLR1 (ENSPPYG00000009878) #34	ENSPPYG00000009879 #35	PSENEN (ENSPPYG00000041378) #36	LIN37 (ENSPPYG00000009880)	HSPB6 (ENSPPYG00000037726)	PROSER3 (ENSPPYG00000009882)	ENSPPYG00000009883
Gibbon	MODERN SPECIES		ENSNLEG00000032363	ENSNLEG00000011072	FAM187B (ENSNLEG00000011080) #10	LSR (ENSNLEG00000011086) #11	ENSNLEG00000011114 #12	HAMP (ENSNLEG00000011124) #13	ENSNLEG00000011129	ENSNLEG00000036142 ##14	CD22 (ENSNLEG00000011143) #15	ENSNLEG00000011168 #17	ENSNLEG00000030964	FFAR2 (ENSNLEG00000035098) #18	KRTDAP (ENSNLEG00000011175) #19	ENSNLEG00000011184	ENSNLEG00000011196 #21	GAPDHS (ENSNLEG00000011203) #22	TMEM147 (ENSNLEG00000011234) #23	ENSNLEG00000011255 #24	PMIS2 (ENSNLEG00000030568) #26	ENSNLEG00000028864	ENSNLEG00000011272 #28	ETV2 (ENSNLEG00000011277) #29	COX6B1 (ENSNLEG00000031334) #30	UPK1A (ENSNLEG00000011292) #31	ZBTB32 (ENSNLEG00000011302) #32	KMT2B (ENSNLEG00000011306) #33	IGFLR1 (ENSNLEG00000011322) #34	ENSNLEG00000011333 #35	PSENEN (ENSNLEG00000031819) #36	LIN37 (ENSNLEG00000011362)	HSPB6 (ENSNLEG00000033563)
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.w.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.w.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Vervet Monkey	MODERN SPECIES	25	FXYD1 (ENSCSAG00000004535)	FXYD7 (ENSCSAG00000004532)	FXYD5 (ENSCSAG00000004529)	FAM187B (ENSCSAG00000004525) #10	LSR (ENSCSAG00000004524) #11	USF2 (ENSCSAG00000004521) #12	HAMP (ENSCSAG00000004516) #13	MAG (ENSCSAG00000004511) #14	CD22 (ENSCSAG00000004508) #15	FFAR1 (ENSCSAG00000018523) #16	ENSCSAG00000018525 #17	FFAR2 (ENSCSAG00000018527) #18	KRTDAP (ENSCSAG00000004502) #19	DMKN (ENSCSAG00000004497)	SBSN (ENSCSAG00000004493) #21	GAPDHS (ENSCSAG00000004488) #22	TMEM147 (ENSCSAG00000004481) #23	ATP4A (ENSCSAG00000004466) #24	ENSCSAG00000004437 #25	HAUS5 (ENSCSAG00000004431) #27	RBM42 (ENSCSAG00000004422) #28	ETV2 (ENSCSAG00000004415) #29	UPK1A (ENSCSAG00000004403) #31	ZBTB32 (ENSCSAG00000004395) #32	KMT2B (ENSCSAG00000004387) #33	IGFLR1 (ENSCSAG00000004372) #34	U2AF1L4 (ENSCSAG00000004364) #35	PSENEN (ENSCSAG00000004359) #36	LIN37 (ENSCSAG00000004351)	HSPB6 (ENSCSAG00000004342)	PROSER3 (ENSCSAG00000004341)
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.w.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Macaca	ANCESTRAL SPECIES	12	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.w.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Pig-tailed macaque	MODERN SPECIES	218	ENSMNEG00000037301 #8	ENSMNEG00000041420 #9	FAM187B (ENSMNEG00000045085) #10	LSR (ENSMNEG00000036886) #11	USF2 (ENSMNEG00000039139) #12	HAMP (ENSMNEG00000040168) #13	ENSMNEG00000043132	ENSMNEG00000036926	MAG (ENSMNEG00000044145) #14	CD22 (ENSMNEG00000032771) #15	FFAR1 (ENSMNEG00000021259) #16	FFAR2 (ENSMNEG00000023313) #18	KRTDAP (ENSMNEG00000034103) #19	DMKN (ENSMNEG00000028628)	SBSN (ENSMNEG00000027478) #21	GAPDHS (ENSMNEG00000006546) #22	TMEM147 (ENSMNEG00000040363) #23	ATP4A (ENSMNEG00000034477) #24	PMIS2 (ENSMNEG00000042059) #26	HAUS5 (ENSMNEG00000043763) #27	RBM42 (ENSMNEG00000030009) #28	ETV2 (ENSMNEG00000034282) #29	ENSMNEG00000043634	UPK1A (ENSMNEG00000015475) #31	ZBTB32 (ENSMNEG00000036607) #32	KMT2B (ENSMNEG00000031122) #33	IGFLR1 (ENSMNEG00000015878) #34	U2AF1L4 (ENSMNEG00000037977) #35	PSENEN (ENSMNEG00000038696) #36	LIN37 (ENSMNEG00000039214)	HSPB6 (ENSMNEG00000042058)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT00900000143204.f	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.w.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Rhesus	MODERN SPECIES	10	FXYD5 (ENSMMUG00000023207) #9	FAM187B (ENSMMUG00000054413) #10	LSR (ENSMMUG00000011294) #11	ENSMMUG00000011291 #12	HAMP (ENSMMUG00000011288) #13	ENSMMUG00000011287	CD22 (ENSMMUG00000017621) #15	FFAR1 (ENSMMUG00000062200) #16	ENSMMUG00000058931 #17	FFAR2 (ENSMMUG00000002695) #18	KRTDAP (ENSMMUG00000002694) #19	ENSMMUG00000058405 #20	DMKN (ENSMMUG00000019064) #20	ENSMMUG00000056948	SBSN (ENSMMUG00000058727) #21	GAPDHS (ENSMMUG00000000837) #22	TMEM147 (ENSMMUG00000000841) #23	ATP4A (ENSMMUG00000000845) #24	ENSMMUG00000052782 #25	HAUS5 (ENSMMUG00000021395) #27	RBM42 (ENSMMUG00000018954) #28	ETV2 (ENSMMUG00000018953) #29	COX6B1 (ENSMMUG00000055747) #30	ENSMMUG00000065025	UPK1A (ENSMMUG00000006711) #31	ZBTB32 (ENSMMUG00000002375) #32	KMT2B (ENSMMUG00000002381) #33	IGFLR1 (ENSMMUG00000002384) #34	U2AF1L4 (ENSMMUG00000048190) #35	PSENEN (ENSMMUG00000054066) #36	LIN37 (ENSMMUG00000002386)
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000005892 #8	FXYD5 (ENSMFAG00000044836)	FAM187B (ENSMFAG00000034358) #10	LSR (ENSMFAG00000038671) #11	USF2 (ENSMFAG00000038362) #12	HAMP (ENSMFAG00000034420) #13	ENSMFAG00000049171	MAG (ENSMFAG00000043926) #14	CD22 (ENSMFAG00000003950) #15	FFAR1 (ENSMFAG00000014904) #16	ENSMFAG00000056645 #17	FFAR2 (ENSMFAG00000022604) #18	KRTDAP (ENSMFAG00000033686) #19	DMKN (ENSMFAG00000045312)	SBSN (ENSMFAG00000001196) #21	GAPDHS (ENSMFAG00000037754) #22	TMEM147 (ENSMFAG00000038699) #23	ATP4A (ENSMFAG00000038036) #24	HAUS5 (ENSMFAG00000001988) #27	RBM42 (ENSMFAG00000002758) #28	ETV2 (ENSMFAG00000042076) #29	COX6B1 (ENSMFAG00000039862) #30	UPK1A (ENSMFAG00000037616) #31	PRODH2 (ENSMFAG00000045422)	NPHS1 (ENSMFAG00000042644)	KIRREL2 (ENSMFAG00000032870)	NFKBID (ENSMFAG00000036666)	APLP1 (ENSMFAG00000038687)	HCST (ENSMFAG00000037963)	ENSMFAG00000039856	ENSMFAG00000055104
Cercopithecinae_b	ANCESTRAL SPECIES	24	ENSGT00940000153062.C	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.w.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Olive baboon	MODERN SPECIES	12	FXYD1 (ENSPANG00000013574)	ENSPANG00000001148 #8	FXYD5 (ENSPANG00000001149)	FAM187B (ENSPANG00000010971) #10	LSR (ENSPANG00000008544) #11	ENSPANG00000011040 #12	HAMP (ENSPANG00000006647) #13	MAG (ENSPANG00000010184) #14	CD22 (ENSPANG00000013639) #15	FFAR1 (ENSPANG00000029700) #16	ENSPANG00000039576 #17	FFAR2 (ENSPANG00000031828) #18	KRTDAP (ENSPANG00000002972) #19	DMKN (ENSPANG00000034437)	ENSPANG00000010970 #21	GAPDHS (ENSPANG00000017399) #22	TMEM147 (ENSPANG00000030080) #23	ATP4A (ENSPANG00000012373) #24	HAUS5 (ENSPANG00000007588) #27	RBM42 (ENSPANG00000017032) #28	ETV2 (ENSPANG00000012973) #29	ENSPANG00000031902 #30	UPK1A (ENSPANG00000018900) #31	ZBTB32 (ENSPANG00000009043) #32	KMT2B (ENSPANG00000007179) #33	IGFLR1 (ENSPANG00000032363) #34	U2AF1L4 (ENSPANG00000018430) #35	PSENEN (ENSPANG00000039997) #36	LIN37 (ENSPANG00000017373)	HSPB6 (ENSPANG00000008104)	PROSER3 (ENSPANG00000007587)
Cercopithecinae_d	ANCESTRAL SPECIES	26	ENSGT00940000153062.C	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.w.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Sooty mangabey	MODERN SPECIES	535	LGI4 (ENSCATG00000029831) #7	FXYD1 (ENSCATG00000018374)	ENSCATG00000030967 #8	FXYD5 (ENSCATG00000037169)	FAM187B (ENSCATG00000037378) #10	LSR (ENSCATG00000032195) #11	USF2 (ENSCATG00000037861) #12	HAMP (ENSCATG00000036093) #13	MAG (ENSCATG00000044795) #14	CD22 (ENSCATG00000031200) #15	FFAR1 (ENSCATG00000012064) #16	FFAR2 (ENSCATG00000009705) #18	KRTDAP (ENSCATG00000036855) #19	DMKN (ENSCATG00000037659)	SBSN (ENSCATG00000032639) #21	GAPDHS (ENSCATG00000033740) #22	TMEM147 (ENSCATG00000043274) #23	ATP4A (ENSCATG00000034273) #24	PMIS2 (ENSCATG00000009797) #26	HAUS5 (ENSCATG00000040450) #27	RBM42 (ENSCATG00000041924) #28	ETV2 (ENSCATG00000037563) #29	ENSCATG00000014257 #30	UPK1A (ENSCATG00000029255) #31	ZBTB32 (ENSCATG00000019611) #32	KMT2B (ENSCATG00000036710) #33	IGFLR1 (ENSCATG00000039982) #34	U2AF1L4 (ENSCATG00000038848) #35	PSENEN (ENSCATG00000037885) #36	LIN37 (ENSCATG00000031287)	HSPB6 (ENSCATG00000037054)
Drill	MODERN SPECIES	851	FXYD1 (ENSMLEG00000044152)	ENSMLEG00000041330 #8	ENSMLEG00000031584 #9	FAM187B (ENSMLEG00000029643) #10	LSR (ENSMLEG00000032933) #11	USF2 (ENSMLEG00000042398) #12	HAMP (ENSMLEG00000030770) #13	MAG (ENSMLEG00000029876) #14	CD22 (ENSMLEG00000038632) #15	FFAR1 (ENSMLEG00000008840) #16	ENSMLEG00000028714 #17	FFAR2 (ENSMLEG00000026867) #18	KRTDAP (ENSMLEG00000031340) #19	DMKN (ENSMLEG00000035853)	SBSN (ENSMLEG00000037895) #21	GAPDHS (ENSMLEG00000044090) #22	TMEM147 (ENSMLEG00000031407) #23	ATP4A (ENSMLEG00000030234) #24	PMIS2 (ENSMLEG00000029551) #26
Rhinopithecus	ANCESTRAL SPECIES	33	ENSGT00940000167486	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.w.b #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Golden snub-nosed monkey	MODERN SPECIES	1462	ENSRROG00000012537	ENSRROG00000042615 #8	ENSRROG00000016914 #9	FAM187B (ENSRROG00000023267) #10	LSR (ENSRROG00000038479) #11	USF2 (ENSRROG00000030002) #12	HAMP (ENSRROG00000044409) #13	MAG (ENSRROG00000034373) #14	CD22 (ENSRROG00000029590) #15	FFAR1 (ENSRROG00000021619) #16	ENSRROG00000043292 #17	FFAR2 (ENSRROG00000016566) #18	KRTDAP (ENSRROG00000031369) #19	DMKN (ENSRROG00000029506)	SBSN (ENSRROG00000019100) #21	GAPDHS (ENSRROG00000028968) #22	TMEM147 (ENSRROG00000031378) #23	ATP4A (ENSRROG00000043675) #24	PMIS2 (ENSRROG00000035520) #26	HAUS5 (ENSRROG00000029290) #27	RBM42 (ENSRROG00000042313) #28	ETV2 (ENSRROG00000005155) #29	COX6B1 (ENSRROG00000023837) #30	UPK1A (ENSRROG00000042608) #31	KMT2B (ENSRROG00000034317) #33	IGFLR1 (ENSRROG00000028583) #34	U2AF1L4 (ENSRROG00000034680) #35	PSENEN (ENSRROG00000041243) #36	LIN37 (ENSRROG00000006651)	HSPB6 (ENSRROG00000043920)	PROSER3 (ENSRROG00000029951)
Black snub-nosed monkey	MODERN SPECIES	1332	ENSRBIG00000034552	ENSRBIG00000034960 #8	ENSRBIG00000031745 #9	FAM187B (ENSRBIG00000030393) #10	LSR (ENSRBIG00000029135) #11	USF2 (ENSRBIG00000042506) #12	HAMP (ENSRBIG00000025955) #13	MAG (ENSRBIG00000030642) #14	CD22 (ENSRBIG00000022725) #15	FFAR1 (ENSRBIG00000030347) #16	ENSRBIG00000038607	FFAR2 (ENSRBIG00000027679) #18	KRTDAP (ENSRBIG00000036843) #19	DMKN (ENSRBIG00000042896)	ENSRBIG00000027742 #21	GAPDHS (ENSRBIG00000034256) #22	TMEM147 (ENSRBIG00000027818) #23	ATP4A (ENSRBIG00000040320) #24	PMIS2 (ENSRBIG00000038354) #26	HAUS5 (ENSRBIG00000039029) #27	RBM42 (ENSRBIG00000007566) #28	ETV2 (ENSRBIG00000042688) #29	COX6B1 (ENSRBIG00000031567) #30	UPK1A (ENSRBIG00000037480) #31	ZBTB32 (ENSRBIG00000037073) #32	KMT2B (ENSRBIG00000032442) #33	IGFLR1 (ENSRBIG00000027425) #34	U2AF1L4 (ENSRBIG00000043188) #35	PSENEN (ENSRBIG00000034536) #36	LIN37 (ENSRBIG00000036951)	HSPB6 (ENSRBIG00000044056)
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b.c #17	ENSGT00990000203527.a.a.a.b.d #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.u #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748.i	ENSGT00940000161100
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b.c #17	ENSGT00990000203527.a.a.a.b.d #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.u #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748.i	ENSGT00940000161100	ENSGT00390000001986
Marmoset	MODERN SPECIES	14	ENSCJAG00000010568 #9	FAM187B (ENSCJAG00000010566) #10	LSR (ENSCJAG00000010544) #11	USF2 (ENSCJAG00000010451) #12	ENSCJAG00000056818	HAMP (ENSCJAG00000043821) #13	MAG (ENSCJAG00000038661) #14	CD22 (ENSCJAG00000010380) #15	FFAR1 (ENSCJAG00000016221) #16	ENSCJAG00000010377 #17	ENSCJAG00000040989 #17	FFAR2 (ENSCJAG00000044681) #18	KRTDAP (ENSCJAG00000034097) #19	DMKN (ENSCJAG00000010353)	ENSCJAG00000010338 #21	GAPDHS (ENSCJAG00000010315) #22	TMEM147 (ENSCJAG00000078329) #23	ATP4A (ENSCJAG00000010270) #24	HAUS5 (ENSCJAG00000010239) #27	RBM42 (ENSCJAG00000010220) #28	ETV2 (ENSCJAG00000041554) #29	ENSCJAG00000010211 #30	UPK1A (ENSCJAG00000009923) #31	ZBTB32 (ENSCJAG00000046270) #32	KMT2B (ENSCJAG00000010126) #33	IGFLR1 (ENSCJAG00000010122) #34	U2AF1L4 (ENSCJAG00000041417) #35	PSENEN (ENSCJAG00000044061) #36	LIN37 (ENSCJAG00000010100)	HSPB6 (ENSCJAG00000048539)	PROSER3 (ENSCJAG00000009534)
Cebidae_a	ANCESTRAL SPECIES	35	ENSGT00940000159697	ENSGT00940000153062.A.a.a.a	ENSGT00940000162018 #7	ENSGT00940000153062.C	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT01090000261135	ENSGT00940000160881 #31	ENSGT00940000162716.c #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748.i	ENSGT00940000161100	ENSGT00390000001986
Capuchin	MODERN SPECIES	318	HPN (ENSCCAG00000038130)	FXYD3 (ENSCCAG00000024435)	LGI4 (ENSCCAG00000034891) #7	FXYD1 (ENSCCAG00000024525)	ENSCCAG00000037106 #8	ENSCCAG00000025959 #9	FAM187B (ENSCCAG00000037865) #10	LSR (ENSCCAG00000030956) #11	USF2 (ENSCCAG00000015835) #12	HAMP (ENSCCAG00000036820) #13	MAG (ENSCCAG00000030872) #14	CD22 (ENSCCAG00000027015) #15	KRTDAP (ENSCCAG00000023068) #19	DMKN (ENSCCAG00000017000)	ENSCCAG00000025043 #21	GAPDHS (ENSCCAG00000034668) #22	TMEM147 (ENSCCAG00000023504) #23	ATP4A (ENSCCAG00000026047) #24	ENSCCAG00000022429	ENSCCAG00000031536	HAUS5 (ENSCCAG00000037849) #27	RBM42 (ENSCCAG00000034440) #28	ETV2 (ENSCCAG00000021289) #29	ENSCCAG00000033854	UPK1A (ENSCCAG00000034688) #31	ZBTB32 (ENSCCAG00000000774) #32	KMT2B (ENSCCAG00000029218) #33	IGFLR1 (ENSCCAG00000021323) #34	U2AF1L4 (ENSCCAG00000026368) #35	PSENEN (ENSCCAG00000029379) #36	LIN37 (ENSCCAG00000024181)
Bolivian squirrel monkey	MODERN SPECIES	134	HPN (ENSSBOG00000003736)	FXYD3 (ENSSBOG00000027763)	LGI4 (ENSSBOG00000033090) #7	FXYD1 (ENSSBOG00000034880)	ENSSBOG00000019460 #8	ENSSBOG00000036174	ENSSBOG00000002478	FAM187B (ENSSBOG00000025551) #10	LSR (ENSSBOG00000020096) #11	HAMP (ENSSBOG00000032972) #13	MAG (ENSSBOG00000031836) #14	CD22 (ENSSBOG00000021482) #15	KRTDAP (ENSSBOG00000031367) #19	DMKN (ENSSBOG00000028642)	SBSN (ENSSBOG00000017970) #21	GAPDHS (ENSSBOG00000021025) #22	TMEM147 (ENSSBOG00000021745) #23	ATP4A (ENSSBOG00000024954) #24	HAUS5 (ENSSBOG00000034903) #27	PMIS2 (ENSSBOG00000034283) #26	RBM42 (ENSSBOG00000030666) #28	ETV2 (ENSSBOG00000019710) #29	UPK1A (ENSSBOG00000030850) #31	ENSSBOG00000025572 #32	KMT2B (ENSSBOG00000028447) #33	IGFLR1 (ENSSBOG00000004110) #34	U2AF1L4 (ENSSBOG00000032012) #35	PSENEN (ENSSBOG00000022426) #36	ENSSBOG00000026265	HSPB6 (ENSSBOG00000024748)	PROSER3 (ENSSBOG00000033486)
Mas night monkey	MODERN SPECIES	933	HPN (ENSANAG00000032541)	FXYD3 (ENSANAG00000027299)	LGI4 (ENSANAG00000031634) #7	FXYD1 (ENSANAG00000006861)	ENSANAG00000015257 #8	FXYD5 (ENSANAG00000034902)	FAM187B (ENSANAG00000038493) #10	LSR (ENSANAG00000035104) #11	USF2 (ENSANAG00000035809) #12	HAMP (ENSANAG00000001616) #13	MAG (ENSANAG00000020980) #14	CD22 (ENSANAG00000030255) #15	KRTDAP (ENSANAG00000033216) #19	DMKN (ENSANAG00000032879)	SBSN (ENSANAG00000025944) #21	GAPDHS (ENSANAG00000019722) #22	TMEM147 (ENSANAG00000023589) #23	ATP4A (ENSANAG00000035718) #24	PMIS2 (ENSANAG00000006804) #26	HAUS5 (ENSANAG00000024629) #27	RBM42 (ENSANAG00000027537) #28	ETV2 (ENSANAG00000025051) #29	ENSANAG00000034163 #30	UPK1A (ENSANAG00000035476) #31	ZBTB32 (ENSANAG00000034122) #32	KMT2B (ENSANAG00000022253) #33	IGFLR1 (ENSANAG00000030710) #34	U2AF1L4 (ENSANAG00000012083) #35	PSENEN (ENSANAG00000031921) #36	ENSANAG00000036444	HSPB6 (ENSANAG00000024500)
Tarsier	MODERN SPECIES	6726													KRTDAP (ENSTSYG00000035063) #19	ENSTSYG00000025828 #20	SBSN (ENSTSYG00000028529) #21	GAPDHS (ENSTSYG00000034122) #22	TMEM147 (ENSTSYG00000008207) #23	ATP4A (ENSTSYG00000029879) #24	ENSTSYG00000025903	ENSTSYG00000030575	HAUS5 (ENSTSYG00000001013) #27	RBM42 (ENSTSYG00000014688) #28	ENSTSYG00000027932 #29	ENSTSYG00000014563 #30
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Tree shrew	MODERN SPECIES	1158														KRTDAP (ENSTBEG00000007368) #19	ENSTBEG00000007730	GAPDHS (ENSTBEG00000008617) #22	ATP4A (ENSTBEG00000008848) #24
Glires	ANCESTRAL SPECIES	6	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Lagomorpha	ANCESTRAL SPECIES	61	ENSGT00980000200079	ENSGT00940000167486	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Pika	MODERN SPECIES	6																ENSOPRG00000004272 #22	ENSOPRG00000004298 #23	ENSOPRG00000004318 #24
Rabbit	MODERN SPECIES	519	HPN (ENSOCUG00000005780)	ENSOCUG00000011695	ENSOCUG00000026229	LGI4 (ENSOCUG00000004599) #7	ENSOCUG00000022123	ENSOCUG00000033465	ENSOCUG00000010570	FAM187B (ENSOCUG00000007131) #10	LSR (ENSOCUG00000016627) #11	USF2 (ENSOCUG00000026259) #12	HAMP (ENSOCUG00000026224) #13	ENSOCUG00000024212	CD22 (ENSOCUG00000007742) #15	ENSOCUG00000026349 #17	FFAR2 (ENSOCUG00000017776) #18	GAPDHS (ENSOCUG00000010922) #22	KRTDAP (ENSOCUG00000010912) #19	ENSOCUG00000038122 #20	RBM42 (ENSOCUG00000003337) #28	ENSOCUG00000027638	SBSN (ENSOCUG00000010917) #21	ATP4A (ENSOCUG00000010926) #24	PMIS2 (ENSOCUG00000037880) #26	HAUS5 (ENSOCUG00000001031) #27	UPK1A (ENSOCUG00000016887) #31	ZBTB32 (ENSOCUG00000012760) #32	KMT2B (ENSOCUG00000012768) #33	IGFLR1 (ENSOCUG00000013428) #34	ENSOCUG00000013434 #35	PSENEN (ENSOCUG00000013445) #36	LIN37 (ENSOCUG00000005936)
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Kangaroo rat	MODERN SPECIES	411	Fxyd3 (ENSDORG00000026248)	ENSDORG00000024390 #7	Fxyd1 (ENSDORG00000030165)	Fxyd7 (ENSDORG00000019853)	ENSDORG00000001949 #9	Lsr (ENSDORG00000011335) #11	Usf2 (ENSDORG00000026323) #12	Hamp (ENSDORG00000027242) #13	Mag (ENSDORG00000008725) #14	Cd22 (ENSDORG00000005576) #15	Ffar1 (ENSDORG00000025362) #16	Ffar3 (ENSDORG00000023863) #17	ENSDORG00000023205	ENSDORG00000025198 #20	ENSDORG00000029573 #21	Gapdhs (ENSDORG00000000807) #22	Tmem147 (ENSDORG00000000803) #23	Atp4a (ENSDORG00000000792) #24	Haus5 (ENSDORG00000012997) #27	Rbm42 (ENSDORG00000013001) #28	ENSDORG00000008392 #29	Cox6b1 (ENSDORG00000008395) #30	Upk1a (ENSDORG00000008396) #31	ENSDORG00000024048	Kmt2b (ENSDORG00000009061) #33	U2af1l4 (ENSDORG00000009078) #35	ENSDORG00000029263 #36	Lin37 (ENSDORG00000009080)	Hspb6 (ENSDORG00000025079)	Arhgap33 (ENSDORG00000007189)	Prodh2 (ENSDORG00000019857)
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Muroidea	ANCESTRAL SPECIES	18	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Cricetidae	ANCESTRAL SPECIES	26	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Cricetidae_B	ANCESTRAL SPECIES	25	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Northern American deer mouse	MODERN SPECIES		Fxyd1 (ENSPEMG00000001941)	Fxyd7 (ENSPEMG00000009879)	Fxyd5 (ENSPEMG00000013644) #9	Fam187b (ENSPEMG00000018912) #10	Lsr (ENSPEMG00000015987) #11	Usf2 (ENSPEMG00000026285) #12	Hamp (ENSPEMG00000014389) #13	Mag (ENSPEMG00000018192) #14	Cd22 (ENSPEMG00000017378) #15	Ffar1 (ENSPEMG00000006951) #16	Ffar3 (ENSPEMG00000007045) #17	Ffar2 (ENSPEMG00000018591) #18	Krtdap (ENSPEMG00000010227) #19	ENSPEMG00000017891 #20	ENSPEMG00000011203 #21	Gapdhs (ENSPEMG00000012645) #22	ENSPEMG00000026276	Tmem147 (ENSPEMG00000002799) #23	Atp4a (ENSPEMG00000005700) #24	2200002J24Rik (ENSPEMG00000014507) #25	ENSPEMG00000030877 #26	Haus5 (ENSPEMG00000010601) #27	Rbm42 (ENSPEMG00000012065) #28	Etv2 (ENSPEMG00000010189) #29	Cox6b1 (ENSPEMG00000001763) #30	Upk1a (ENSPEMG00000019259) #31	Zbtb32 (ENSPEMG00000018640) #32	ENSPEMG00000027670 #33	Igflr1 (ENSPEMG00000013199) #34	ENSPEMG00000010021 #35	Psenen (ENSPEMG00000011498) #36
Prairie vole	MODERN SPECIES	354	Fxyd5 (ENSMOCG00000015934) #9	Fam187b (ENSMOCG00000020228) #10	Lsr (ENSMOCG00000016779) #11	Usf2 (ENSMOCG00000015341) #12	Hamp (ENSMOCG00000020398) #13	Mag (ENSMOCG00000008782) #14	Cd22 (ENSMOCG00000014498) #15	ENSMOCG00000019461 #17	Ffar1 (ENSMOCG00000022880) #16	ENSMOCG00000001559 #17	ENSMOCG00000001927 #17	Ffar2 (ENSMOCG00000018465) #18	Krtdap (ENSMOCG00000007588) #19	ENSMOCG00000018485 #20	ENSMOCG00000002298 #21	Gapdhs (ENSMOCG00000022374) #22	Tmem147 (ENSMOCG00000016161) #23	Atp4a (ENSMOCG00000016004) #24	2200002J24Rik (ENSMOCG00000009077) #25	Pmis2 (ENSMOCG00000011910) #26	Haus5 (ENSMOCG00000017851) #27	Rbm42 (ENSMOCG00000000405) #28	Etv2 (ENSMOCG00000015526) #29	ENSMOCG00000015371 #30	Upk1a (ENSMOCG00000021325) #31	ENSMOCG00000003537	Zbtb32 (ENSMOCG00000004626) #32	Kmt2b (ENSMOCG00000016286) #33	Igflr1 (ENSMOCG00000009939) #34	U2af1l4 (ENSMOCG00000009737) #35	ENSMOCG00000002741 #36
Cricetinae	ANCESTRAL SPECIES	39	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01000000216282	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Chinese hamster chok1gshd	MODERN SPECIES	282	ENSCGRG00001016278	Fxyd7 (ENSCGRG00001019616)	ENSCGRG00001020933 #9	Fam187b (ENSCGRG00001022281) #10	Lsr (ENSCGRG00001008877) #11	Hamp (ENSCGRG00001015853) #13	Usf2 (ENSCGRG00001000125) #12	Mag (ENSCGRG00001020248) #14	Cd22 (ENSCGRG00001005829) #15	Ffar1 (ENSCGRG00001013527) #16	Ffar3 (ENSCGRG00001014218) #17	Ffar2 (ENSCGRG00001013837) #18	Krtdap (ENSCGRG00001007438) #19	ENSCGRG00001012510 #20	ENSCGRG00001014797 #21	Gapdhs (ENSCGRG00001023198) #22	Tmem147 (ENSCGRG00001009966) #23	Atp4a (ENSCGRG00001019955) #24	2200002J24Rik (ENSCGRG00001000689) #25	Pmis2 (ENSCGRG00001012280) #26	Haus5 (ENSCGRG00001012861) #27	Rbm42 (ENSCGRG00001018540) #28	Etv2 (ENSCGRG00001014814) #29	ENSCGRG00001015745 #30	Upk1a (ENSCGRG00001016838) #31	Zbtb32 (ENSCGRG00001018211) #32	Kmt2b (ENSCGRG00001023704) #33	U2af1l4 (ENSCGRG00001014816) #35	Psenen (ENSCGRG00001018017) #36	Lin37 (ENSCGRG00001000388)	Hspb6 (ENSCGRG00001014290)
Golden Hamster	MODERN SPECIES	734	Lgi4 (ENSMAUG00000021244) #7	Fxyd1 (ENSMAUG00000012271)	Fxyd7 (ENSMAUG00000006720)	ENSMAUG00000010285 #9	ENSMAUG00000021705	Lsr (ENSMAUG00000017540) #11	Usf2 (ENSMAUG00000012832) #12	ENSMAUG00000009819 #13	ENSMAUG00000014372	Cd22 (ENSMAUG00000020754) #15	Ffar1 (ENSMAUG00000008356) #16	Ffar3 (ENSMAUG00000008469) #17	Ffar2 (ENSMAUG00000008579) #18	ENSMAUG00000010359 #20	ENSMAUG00000016689 #21	Gapdhs (ENSMAUG00000018913) #22	Tmem147 (ENSMAUG00000018820) #23	Atp4a (ENSMAUG00000020584) #24	2200002J24Rik (ENSMAUG00000002687) #25	Pmis2 (ENSMAUG00000021934) #26	Haus5 (ENSMAUG00000016365) #27	ENSMAUG00000011346	ENSMAUG00000009159 #29	ENSMAUG00000008811	Cox6b1 (ENSMAUG00000011240) #30	Upk1a (ENSMAUG00000002113) #31	ENSMAUG00000020943 #32	Kmt2b (ENSMAUG00000020252) #33	ENSMAUG00000017381 #35	Psenen (ENSMAUG00000011553) #36	Lin37 (ENSMAUG00000019432)
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Mus	ANCESTRAL SPECIES		ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Mus_B	ANCESTRAL SPECIES		ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Mouse	MODERN SPECIES	16	Fxyd7 (ENSMUSG00000036578)	Fxyd5 (ENSMUSG00000009687) #9	Fam187b (ENSMUSG00000046826) #10	Lsr (ENSMUSG00000001247) #11	Usf2 (ENSMUSG00000058239) #12	Hamp (ENSMUSG00000050440) #13	Hamp2 (ENSMUSG00000056978)	Mag (ENSMUSG00000036634) #14	Cd22 (ENSMUSG00000030577) #15	Ffar1 (ENSMUSG00000044453) #16	Ffar3 (ENSMUSG00000019429) #17	Ffar2 (ENSMUSG00000051314) #18	Krtdap (ENSMUSG00000074199) #19	Dmkn (ENSMUSG00000060962)	Sbsn (ENSMUSG00000046056) #21	Gapdhs (ENSMUSG00000061099) #22	Tmem147 (ENSMUSG00000006315) #23	Atp4a (ENSMUSG00000005553) #24	2200002J24Rik (ENSMUSG00000013083) #25	Pmis2 (ENSMUSG00000049761) #26	Haus5 (ENSMUSG00000078762) #27	Rbm42 (ENSMUSG00000036733) #28	Etv2 (ENSMUSG00000006311) #29	Cox6b1 (ENSMUSG00000036751) #30	Upk1a (ENSMUSG00000006313) #31	Zbtb32 (ENSMUSG00000006310) #32	Kmt2b (ENSMUSG00000006307) #33	Igflr1 (ENSMUSG00000036826) #34	U2af1l4 (ENSMUSG00000078765) #35	Psenen (ENSMUSG00000036835) #36	Lin37 (ENSMUSG00000036845)
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Steppe mouse	MODERN SPECIES	2795															ENSMSIG00000007048	Gapdhs (ENSMSIG00000007027) #22	Tmem147 (ENSMSIG00000006914) #23	Atp4a (ENSMSIG00000006805) #24	ENSMSIG00000006794	Pmis2 (ENSMSIG00000006779) #26	Haus5 (ENSMSIG00000006715) #27	Rbm42 (ENSMSIG00000006648) #28	Etv2 (ENSMSIG00000006621) #29	ENSMSIG00000006599 #30	Upk1a (ENSMSIG00000006582) #31	Zbtb32 (ENSMSIG00000006561) #32	Kmt2b (ENSMSIG00000006214) #33	Igflr1 (ENSMSIG00000006148) #34	U2af1l4 (ENSMSIG00000005715) #35	Psenen (ENSMSIG00000005677) #36	Lin37 (ENSMSIG00000005641)
spretus	MODERN SPECIES	16	Fxyd7 (MGP_SPRETEiJ_G0030653)	Fxyd5 (MGP_SPRETEiJ_G0030652) #9	Fam187b (MGP_SPRETEiJ_G0030651) #10	Lsr (MGP_SPRETEiJ_G0030650) #11	Usf2 (MGP_SPRETEiJ_G0030649) #12	MGP_SPRETEiJ_G0030648	Hamp (MGP_SPRETEiJ_G0030647) #13	Mag (MGP_SPRETEiJ_G0030646) #14	Cd22 (MGP_SPRETEiJ_G0030645) #15	Ffar1 (MGP_SPRETEiJ_G0030644) #16	Ffar3 (MGP_SPRETEiJ_G0030643) #17	Ffar2 (MGP_SPRETEiJ_G0030642) #18	Krtdap (MGP_SPRETEiJ_G0030641) #19	Dmkn (MGP_SPRETEiJ_G0030640)	MGP_SPRETEiJ_G0030639 #21	Gapdhs (MGP_SPRETEiJ_G0030638) #22	Tmem147 (MGP_SPRETEiJ_G0030637) #23	Atp4a (MGP_SPRETEiJ_G0030636) #24	2200002J24Rik (MGP_SPRETEiJ_G0030635) #25	Pmis2 (MGP_SPRETEiJ_G0030634) #26	Haus5 (MGP_SPRETEiJ_G0030633) #27	Rbm42 (MGP_SPRETEiJ_G0030632) #28	Etv2 (MGP_SPRETEiJ_G0030631) #29	Cox6b1 (MGP_SPRETEiJ_G0030630) #30	Upk1a (MGP_SPRETEiJ_G0030629) #31	Zbtb32 (MGP_SPRETEiJ_G0030628) #32	Kmt2b (MGP_SPRETEiJ_G0030627) #33	Igflr1 (MGP_SPRETEiJ_G0030626) #34	U2af1l4 (MGP_SPRETEiJ_G0030625) #35	Psenen (MGP_SPRETEiJ_G0030624) #36	Lin37 (MGP_SPRETEiJ_G0030623)
Ryukyu mouse	MODERN SPECIES	16	Fxyd7 (MGP_CAROLIEiJ_G0029557)	Fxyd5 (MGP_CAROLIEiJ_G0029556) #9	Fam187b (MGP_CAROLIEiJ_G0029555) #10	Lsr (MGP_CAROLIEiJ_G0029554) #11	Usf2 (MGP_CAROLIEiJ_G0029553) #12	MGP_CAROLIEiJ_G0029552 #13	MGP_CAROLIEiJ_G0029551 #13	Mag (MGP_CAROLIEiJ_G0029550) #14	Cd22 (MGP_CAROLIEiJ_G0029549) #15	Ffar1 (MGP_CAROLIEiJ_G0029548) #16	Ffar3 (MGP_CAROLIEiJ_G0029547) #17	Ffar2 (MGP_CAROLIEiJ_G0029546) #18	Krtdap (MGP_CAROLIEiJ_G0029545) #19	Dmkn (MGP_CAROLIEiJ_G0029544)	MGP_CAROLIEiJ_G0029543 #21	Gapdhs (MGP_CAROLIEiJ_G0029542) #22	Tmem147 (MGP_CAROLIEiJ_G0029541) #23	Atp4a (MGP_CAROLIEiJ_G0029540) #24	2200002J24Rik (MGP_CAROLIEiJ_G0029539) #25	Pmis2 (MGP_CAROLIEiJ_G0029538) #26	Haus5 (MGP_CAROLIEiJ_G0029537) #27	Rbm42 (MGP_CAROLIEiJ_G0029536) #28	Etv2 (MGP_CAROLIEiJ_G0029535) #29	Cox6b1 (MGP_CAROLIEiJ_G0029534) #30	Upk1a (MGP_CAROLIEiJ_G0029533) #31	Zbtb32 (MGP_CAROLIEiJ_G0029532) #32	Kmt2b (MGP_CAROLIEiJ_G0029531) #33	Igflr1 (MGP_CAROLIEiJ_G0029530) #34	U2af1l4 (MGP_CAROLIEiJ_G0029529) #35	Psenen (MGP_CAROLIEiJ_G0029528) #36	Lin37 (MGP_CAROLIEiJ_G0029527)
Shrew mouse	MODERN SPECIES		Lgi4 (MGP_PahariEiJ_G0012791) #7	Fxyd1 (MGP_PahariEiJ_G0012790)	Fxyd7 (MGP_PahariEiJ_G0012789)	MGP_PahariEiJ_G0012788 #9	Fam187b (MGP_PahariEiJ_G0012787) #10	Lsr (MGP_PahariEiJ_G0012786) #11	Usf2 (MGP_PahariEiJ_G0012785) #12	Mag (MGP_PahariEiJ_G0012784) #14	Cd22 (MGP_PahariEiJ_G0012783) #15	Ffar1 (MGP_PahariEiJ_G0012782) #16	Ffar3 (MGP_PahariEiJ_G0012781) #17	MGP_PahariEiJ_G0012780 #18	Krtdap (MGP_PahariEiJ_G0012779) #19	Dmkn (MGP_PahariEiJ_G0012778)	MGP_PahariEiJ_G0012777 #21	Gapdhs (MGP_PahariEiJ_G0012776) #22	Tmem147 (MGP_PahariEiJ_G0012775) #23	Atp4a (MGP_PahariEiJ_G0012774) #24	MGP_PahariEiJ_G0012773 #25	Pmis2 (MGP_PahariEiJ_G0012772) #26	MGP_PahariEiJ_G0012771 #27	Rbm42 (MGP_PahariEiJ_G0012770) #28	Etv2 (MGP_PahariEiJ_G0012769) #29	Cox6b1 (MGP_PahariEiJ_G0012768) #30	Upk1a (MGP_PahariEiJ_G0012767) #31	MGP_PahariEiJ_G0012766 #32	Kmt2b (MGP_PahariEiJ_G0012765) #33	Igflr1 (MGP_PahariEiJ_G0012764) #34	U2af1l4 (MGP_PahariEiJ_G0012763) #35	Psenen (MGP_PahariEiJ_G0012762) #36	Lin37 (MGP_PahariEiJ_G0012761)
Rat	MODERN SPECIES		Fxyd7 (ENSRNOG00000021067) #8	Fxyd5 (ENSRNOG00000021062)	Fam187b (ENSRNOG00000021060) #10	Lsr (ENSRNOG00000021053) #11	Usf2 (ENSRNOG00000053725) #12	Hamp (ENSRNOG00000021029) #13	Mag (ENSRNOG00000021023) #14	Cd22 (ENSRNOG00000024000) #15	Ffar1 (ENSRNOG00000024009) #16	Ffar3 (ENSRNOG00000037467) #17	Ffar2 (ENSRNOG00000021021) #18	LOC100361079 (ENSRNOG00000002340)	Krtdap (ENSRNOG00000062262)	Dmkn (ENSRNOG00000055934)	Sbsn (ENSRNOG00000021015) #21	Gapdhs (ENSRNOG00000021009) #22	Tmem147 (ENSRNOG00000021006) #23	Atp4a (ENSRNOG00000020985) #24	LOC688924 (ENSRNOG00000037485) #25	Haus5 (ENSRNOG00000024266) #27	Rbm42 (ENSRNOG00000024278) #28	Etv2 (ENSRNOG00000024288) #29	Cox6b1 (ENSRNOG00000024309) #30	Upk1a (ENSRNOG00000024331) #31	Zbtb32 (ENSRNOG00000042465) #32	Kmt2b (ENSRNOG00000055525) #33	Igflr1 (ENSRNOG00000020957) #34	U2af1l4 (ENSRNOG00000024497) #35	Psenen (ENSRNOG00000020941) #36	Lin37 (ENSRNOG00000020929)	Hspb6 (ENSRNOG00000020922)
Upper Galilee mountains blind mole rat	MODERN SPECIES	588	Fxyd1 (ENSNGAG00000014642)	Fxyd7 (ENSNGAG00000020400)	ENSNGAG00000010811 #9	Fam187b (ENSNGAG00000008345) #10	ENSNGAG00000010961 #11	Usf2 (ENSNGAG00000002194) #12	Hamp (ENSNGAG00000015641) #13	Mag (ENSNGAG00000016627) #14	Cd22 (ENSNGAG00000018250) #15	Ffar1 (ENSNGAG00000018853) #16	Ffar3 (ENSNGAG00000003343) #17	Ffar2 (ENSNGAG00000001262) #18	Krtdap (ENSNGAG00000019930) #19	Dmkn (ENSNGAG00000002220)	ENSNGAG00000014325 #21	Gapdhs (ENSNGAG00000006334) #22	Tmem147 (ENSNGAG00000000571) #23	Atp4a (ENSNGAG00000010161) #24	Pmis2 (ENSNGAG00000018203) #26	ENSNGAG00000018860	Rbm42 (ENSNGAG00000019698) #28	ENSNGAG00000014523 #29	Cox6b1 (ENSNGAG00000006743) #30	Upk1a (ENSNGAG00000007594) #31	ENSNGAG00000008976 #32	Kmt2b (ENSNGAG00000015178) #33	Igflr1 (ENSNGAG00000017383) #34	U2af1l4 (ENSNGAG00000015744) #35	Psenen (ENSNGAG00000007907) #36	Lin37 (ENSNGAG00000010257)	Hspb6 (ENSNGAG00000001412)
Lesser Egyptian jerboa	MODERN SPECIES	73	Lgi4 (ENSJJAG00000018358) #7	Fxyd1 (ENSJJAG00000000375)	Fxyd7 (ENSJJAG00000015591)	ENSJJAG00000015376 #10	Lsr (ENSJJAG00000018890) #11	Usf2 (ENSJJAG00000012439) #12	Hamp (ENSJJAG00000010683) #13	Mag (ENSJJAG00000020092) #14	Cd22 (ENSJJAG00000020411) #15	Ffar1 (ENSJJAG00000010874) #16	Ffar3 (ENSJJAG00000006749) #17	Ffar2 (ENSJJAG00000010644) #18	Krtdap (ENSJJAG00000023589) #19	Dmkn (ENSJJAG00000020539)	ENSJJAG00000017376 #21	Gapdhs (ENSJJAG00000005822) #22	Tmem147 (ENSJJAG00000017979) #23	Atp4a (ENSJJAG00000024385) #24	Haus5 (ENSJJAG00000017414) #27	Rbm42 (ENSJJAG00000010421) #28	ENSJJAG00000024116 #29	Cox6b1 (ENSJJAG00000012463) #30	Upk1a (ENSJJAG00000014678) #31	ENSJJAG00000020603	Kmt2b (ENSJJAG00000002722) #33	U2af1l4 (ENSJJAG00000006677) #35	Psenen (ENSJJAG00000017575) #36	Lin37 (ENSJJAG00000018270)	Hspb6 (ENSJJAG00000014953)	Arhgap33 (ENSJJAG00000023077)	Prodh2 (ENSJJAG00000022689)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085.nb	ENSGT00530000063023.A.a
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085.nb	ENSGT00530000063023.A.a
Hystricomorpha_b	ANCESTRAL SPECIES	8	ENSGT00940000162018 #7	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085.nb	ENSGT00530000063023.A.a
Long-tailed chinchilla	MODERN SPECIES	175	FXYD1 (ENSCLAG00000015559)	FXYD7 (ENSCLAG00000011132)	ENSCLAG00000012273 #10	LSR (ENSCLAG00000012215) #11	USF2 (ENSCLAG00000012758) #12	HAMP (ENSCLAG00000014780) #13	MAG (ENSCLAG00000014614) #14	CD22 (ENSCLAG00000012767) #15	FFAR1 (ENSCLAG00000017824) #16	ENSCLAG00000014285 #17	ENSCLAG00000015194	FFAR2 (ENSCLAG00000011955) #18	KRTDAP (ENSCLAG00000012497) #19	ENSCLAG00000016791	ENSCLAG00000012824 #21	GAPDHS (ENSCLAG00000013274) #22	TMEM147 (ENSCLAG00000017174) #23	ATP4A (ENSCLAG00000013870) #24	HAUS5 (ENSCLAG00000011624) #27	RBM42 (ENSCLAG00000012865) #28	ETV2 (ENSCLAG00000011446) #29	RHPN2 (ENSCLAG00000011890)	FAAP24 (ENSCLAG00000013484)	ENSCLAG00000012488	SLC7A9 (ENSCLAG00000012671)	TDRD12 (ENSCLAG00000012138)	NUDT19 (ENSCLAG00000015394)	RGS9BP (ENSCLAG00000017932)	ENSCLAG00000013353	ENSCLAG00000014452	DPY19L3 (ENSCLAG00000013128)
Degu	MODERN SPECIES	124	FXYD3 (ENSODEG00000014504)	LGI4 (ENSODEG00000014287) #7	FXYD1 (ENSODEG00000014043)	ENSODEG00000015329 #8	ENSODEG00000014231 #9	LSR (ENSODEG00000014322) #11	USF2 (ENSODEG00000014500) #12	HAMP (ENSODEG00000015547) #13	MAG (ENSODEG00000014122) #14	CD22 (ENSODEG00000014197) #15	FFAR1 (ENSODEG00000020315) #16	ENSODEG00000020312 #17	FFAR2 (ENSODEG00000020307) #18	ENSODEG00000014042	ENSODEG00000014823 #21	GAPDHS (ENSODEG00000013909) #22	TMEM147 (ENSODEG00000014601) #23	ATP4A (ENSODEG00000014297) #24	HAUS5 (ENSODEG00000015029) #27	ENSODEG00000020382	RBM42 (ENSODEG00000013705) #28	ENSODEG00000014537 #29	ENSODEG00000020158	RHPN2 (ENSODEG00000014557)	FAAP24 (ENSODEG00000013890)	CEP89 (ENSODEG00000014225)	ENSODEG00000015062	ENSODEG00000014355	TDRD12 (ENSODEG00000014443)	NUDT19 (ENSODEG00000014770)	RGS9BP (ENSODEG00000020326)
Guinea pig	MODERN SPECIES	56	LGI4 (ENSCPOG00000002945) #7	FXYD1 (ENSCPOG00000019910)	FXYD7 (ENSCPOG00000036482)	ENSCPOG00000004063 #9	ENSCPOG00000023557 #10	LSR (ENSCPOG00000012142) #11	USF2 (ENSCPOG00000012147) #12	HAMP (ENSCPOG00000036468) #13	MAG (ENSCPOG00000012151) #14	CD22 (ENSCPOG00000012154) #15	ENSCPOG00000037551 #16	ENSCPOG00000036207 #16	FFAR2 (ENSCPOG00000033507) #18	KRTDAP (ENSCPOG00000010684) #19	SBSN (ENSCPOG00000030769) #21	GAPDHS (ENSCPOG00000010687) #22	TMEM147 (ENSCPOG00000032771) #23	ATP4A (ENSCPOG00000005328) #24	HAUS5 (ENSCPOG00000002950) #27	RBM42 (ENSCPOG00000012365) #28	ENSCPOG00000013209 #29	RHPN2 (ENSCPOG00000011968)	FAAP24 (ENSCPOG00000011965)	CEP89 (ENSCPOG00000001470)	ENSCPOG00000011225	ENSCPOG00000030866	ENSCPOG00000034999	TDRD12 (ENSCPOG00000002876)	NUDT19 (ENSCPOG00000038218)	RGS9BP (ENSCPOG00000000730)	ANKRD27 (ENSCPOG00000000160)
Naked mole-rat female	MODERN SPECIES	20	LGI4 (ENSHGLG00000018052) #7	FXYD1 (ENSHGLG00000015284)	ENSHGLG00000040719 #9	LSR (ENSHGLG00000006626) #11	FAM187B (ENSHGLG00000034675) #10	ENSHGLG00000045924 #10	USF2 (ENSHGLG00000011485) #12	ENSHGLG00000008083	MAG (ENSHGLG00000006740) #14	CD22 (ENSHGLG00000011680) #15	FFAR1 (ENSHGLG00000021270) #16	FFAR2 (ENSHGLG00000006807) #18	KRTDAP (ENSHGLG00000033622) #19	ENSHGLG00000014982	SBSN (ENSHGLG00000015078) #21	GAPDHS (ENSHGLG00000015071) #22	TMEM147 (ENSHGLG00000018035) #23	ATP4A (ENSHGLG00000014936) #24	HAUS5 (ENSHGLG00000015256) #27	RBM42 (ENSHGLG00000008418) #28	ENSHGLG00000006342 #29	ENSHGLG00000005491	FAAP24 (ENSHGLG00000047787)	CEP89 (ENSHGLG00000015749)	TDRD12 (ENSHGLG00000015608)	ENSHGLG00000049663	ENSHGLG00000032764	ENSHGLG00000033957	RGS9BP (ENSHGLG00000043502)	ENSHGLG00000000739	PDCD5 (ENSHGLG00000015879)
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148.j #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Eurasian red squirrel	MODERN SPECIES	8	FXYD5 (ENSSVLG00005024145)	FAM187B (ENSSVLG00005024242) #10	LSR (ENSSVLG00005024323) #11	USF2 (ENSSVLG00005024577) #12	HAMP (ENSSVLG00005024635) #13	MAG (ENSSVLG00005024672) #14	ENSSVLG00005024753	CD22 (ENSSVLG00005024771) #15	FFAR1 (ENSSVLG00005024814) #16	ENSSVLG00005024829 #17	ENSSVLG00005024839 ##18	FFAR2 (ENSSVLG00005024856) #18	KRTDAP (ENSSVLG00005024878) #19	ENSSVLG00005025135	ENSSVLG00005025335 #21	GAPDHS (ENSSVLG00005008943) #22	TMEM147 (ENSSVLG00005009024) #23	ATP4A (ENSSVLG00005009101) #24	ENSSVLG00005009234 #25	ENSSVLG00005009260	ENSSVLG00005009271 #26	HAUS5 (ENSSVLG00005009301) #27	RBM42 (ENSSVLG00005009469) #28	ETV2 (ENSSVLG00005009801) #29	ENSSVLG00005009927 #30	UPK1A (ENSSVLG00005009967) #31	ZBTB32 (ENSSVLG00005010042) #32	KMT2B (ENSSVLG00005010126) #33	ENSSVLG00005010528 #34	U2AF1L4 (ENSSVLG00005010572) #35	PSENEN (ENSSVLG00005010696) #36
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148.j #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.l #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Marmotini_b	ANCESTRAL SPECIES	50	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148.j #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.l #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Squirrel	MODERN SPECIES	170	FXYD3 (ENSSTOG00000011416)	LGI4 (ENSSTOG00000011421) #7	FXYD1 (ENSSTOG00000029452)	FAM187B (ENSSTOG00000027316) #10	LSR (ENSSTOG00000004494) #11	USF2 (ENSSTOG00000022219) #12	HAMP (ENSSTOG00000031167) #13	ENSSTOG00000009953	CD22 (ENSSTOG00000009964) #15	ENSSTOG00000006843 #17	ENSSTOG00000026304 ##18	FFAR2 (ENSSTOG00000007297) #18	KRTDAP (ENSSTOG00000007319) #19	DMKN (ENSSTOG00000007332)	ENSSTOG00000027294 #21	GAPDHS (ENSSTOG00000007355) #22	TMEM147 (ENSSTOG00000007378) #23	ATP4A (ENSSTOG00000007393) #24	HAUS5 (ENSSTOG00000013031) #27	RBM42 (ENSSTOG00000013050) #28	ENSSTOG00000013057 #29	COX6B1 (ENSSTOG00000030918) #30	UPK1A (ENSSTOG00000024409) #31	ENSSTOG00000021374	KMT2B (ENSSTOG00000027453) #33	ENSSTOG00000000881 #34	U2AF1L4 (ENSSTOG00000000884) #35	PSENEN (ENSSTOG00000024185) #36	LIN37 (ENSSTOG00000019560)	HSPB6 (ENSSTOG00000009121)	PROSER3 (ENSSTOG00000029163)
Arctic ground squirrel	MODERN SPECIES	86	FAM187B (ENSUPAG00010010954) #10	LSR (ENSUPAG00010010965) #11	USF2 (ENSUPAG00010010979) #12	HAMP (ENSUPAG00010011082) #13	MAG (ENSUPAG00010011084) #14	CD22 (ENSUPAG00010011104) #15	FFAR1 (ENSUPAG00010011354) #16	ENSUPAG00010011355 #17	ENSUPAG00010011359 ##18	FFAR2 (ENSUPAG00010011361) #18	KRTDAP (ENSUPAG00010011363) #19	ENSUPAG00010011397 #20	ENSUPAG00010011405	ENSUPAG00010011418 #21	ENSUPAG00010011431 #21	GAPDHS (ENSUPAG00010011434) #22	TMEM147 (ENSUPAG00010011488) #23	ATP4A (ENSUPAG00010011498) #24	ENSUPAG00010011542 #25	ENSUPAG00010011550	ENSUPAG00010011553
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	45	ENSMMMG00000006209 #8	ENSMMMG00000006201 #9	FAM187B (ENSMMMG00000006192) #10	LSR (ENSMMMG00000006178) #11	USF2 (ENSMMMG00000006171) #12	HAMP (ENSMMMG00000006164) #13	MAG (ENSMMMG00000006122) #14	CD22 (ENSMMMG00000006006) #15	FFAR1 (ENSMMMG00000006000) #16	ENSMMMG00000005988 #17	ENSMMMG00000005965 ##18	FFAR2 (ENSMMMG00000005959) #18	KRTDAP (ENSMMMG00000005909) #19	ENSMMMG00000005904 #20	ENSMMMG00000005884 #21	GAPDHS (ENSMMMG00000005854) #22	TMEM147 (ENSMMMG00000005820) #23	ATP4A (ENSMMMG00000005756) #24	ENSMMMG00000005752 #25	ENSMMMG00000005741	HAUS5 (ENSMMMG00000005728) #27	RBM42 (ENSMMMG00000005697) #28	ETV2 (ENSMMMG00000005681) #29	COX6B1 (ENSMMMG00000005664) #30	UPK1A (ENSMMMG00000005648) #31	ZBTB32 (ENSMMMG00000005625) #32	KMT2B (ENSMMMG00000005534) #33	IGFLR1 (ENSMMMG00000005530) #34	ENSMMMG00000005467 #35	PSENEN (ENSMMMG00000005456) #36	LIN37 (ENSMMMG00000005423)
Alpin marmot	MODERN SPECIES	11	CDK17 (ENSMMMG00000019989)	ELK3 (ENSMMMG00000020001)	LTA4H (ENSMMMG00000020008)	HAL (ENSMMMG00000020025)	AMDHD1 (ENSMMMG00000020040)	CCDC38 (ENSMMMG00000020049)	SNRPF (ENSMMMG00000020063)	NTN4 (ENSMMMG00000020068)	USP44 (ENSMMMG00000020076)	METAP2 (ENSMMMG00000020081)	VEZT (ENSMMMG00000020109)	FGD6 (ENSMMMG00000020186)	NR2C1 (ENSMMMG00000020203)	NDUFA12 (ENSMMMG00000020249)	TMCC3 (ENSMMMG00000020256)	ENSMMMG00000020271 #22	CEP83 (ENSMMMG00000020275)	PLXNC1 (ENSMMMG00000020295)	CRADD (ENSMMMG00000020454)	SOCS2 (ENSMMMG00000020455)	ENSMMMG00000020461	ENSMMMG00000020474	ENSMMMG00000020505	EEA1 (ENSMMMG00000020523)	ENSMMMG00000020545	ENSMMMG00000020551	BTG1 (ENSMMMG00000020559)	DCN (ENSMMMG00000020572)	LUM (ENSMMMG00000020574)	KERA (ENSMMMG00000020583)	EPYC (ENSMMMG00000020588)
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Eulipotyphla	ANCESTRAL SPECIES	804																ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24
Hedgehog	MODERN SPECIES	909																GAPDHS (ENSEEUG00000014464) #22	TMEM147 (ENSEEUG00000014499) #23	ENSEEUG00000014605 #24
Common shrew	MODERN SPECIES	521																GAPDHS (ENSSARG00000010957) #22	TMEM147 (ENSSARG00000010975) #23
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Chiroptera	ANCESTRAL SPECIES	46	ENSGT00940000153062.A.b.a	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.y #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.y #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986	ENSGT00940000155110
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1181	FXYD7 (ENSMLUG00000006441)	ENSMLUG00000006444 #9	FAM187B (ENSMLUG00000011342) #10	LSR (ENSMLUG00000029908) #11	USF2 (ENSMLUG00000028063) #12	HAMP (ENSMLUG00000006207) #13	MAG (ENSMLUG00000024023) #14	ENSMLUG00000025953	CD22 (ENSMLUG00000011794) #15	FFAR1 (ENSMLUG00000027056) #16	ENSMLUG00000012400 #17	FFAR2 (ENSMLUG00000012387) #18	KRTDAP (ENSMLUG00000016368) #19	DMKN (ENSMLUG00000016376)	SBSN (ENSMLUG00000017105) #21	ENSMLUG00000027122 #22	TMEM147 (ENSMLUG00000016383) #23	ATP4A (ENSMLUG00000016393) #24	ENSMLUG00000023510	HAUS5 (ENSMLUG00000016158) #27	RBM42 (ENSMLUG00000011334) #28	ETV2 (ENSMLUG00000011347) #29	ENSMLUG00000011365 #30	UPK1A (ENSMLUG00000011378) #31	ZBTB32 (ENSMLUG00000011396) #32	KMT2B (ENSMLUG00000011406) #33	IGFLR1 (ENSMLUG00000011490) #34	PSENEN (ENSMLUG00000011528) #36	LIN37 (ENSMLUG00000011538)	ENSMLUG00000028307	PROSER3 (ENSMLUG00000029985)
Microbat	MODERN SPECIES	1294															RAP1GDS1 (ENSMLUG00000006980)	ENSMLUG00000022631 #22	PTCHD3 (ENSMLUG00000015134)
Greater horseshoe bat	MODERN SPECIES	6	LGI4 (ENSRFEG00010008235) #7	ENSRFEG00010008312 #8	ENSRFEG00010008463 #9	FAM187B (ENSRFEG00010008528) #10	ENSRFEG00010008587 #11	USF2 (ENSRFEG00010008630) #12	ENSRFEG00010008743 #13	MAG (ENSRFEG00010008783) #14	CD22 (ENSRFEG00010008877) #15	FFAR1 (ENSRFEG00010008903) #16	ENSRFEG00010008920 #17	FFAR2 (ENSRFEG00010008937) #18	KRTDAP (ENSRFEG00010008968) #19	DMKN (ENSRFEG00010009084)	ENSRFEG00010009580 #21	GAPDHS (ENSRFEG00010009633) #22	TMEM147 (ENSRFEG00010009762) #23	ATP4A (ENSRFEG00010009845) #24	HAUS5 (ENSRFEG00010010131) #27	RBM42 (ENSRFEG00010010239) #28	ETV2 (ENSRFEG00010010465) #29	ENSRFEG00010010656 #30	UPK1A (ENSRFEG00010010716) #31	ZBTB32 (ENSRFEG00010010841) #32	KMT2B (ENSRFEG00010010888) #33	IGFLR1 (ENSRFEG00010010942) #34	PSENEN (ENSRFEG00010010977) #36	LIN37 (ENSRFEG00010011025)	HSPB6 (ENSRFEG00010011062)	ENSRFEG00010011123	ARHGAP33 (ENSRFEG00010011411)
Megabat	MODERN SPECIES	3838																GAPDHS (ENSPVAG00000012162) #22	TMEM147 (ENSPVAG00000012168) #23	ATP4A (ENSPVAG00000012169) #24
Equus	ANCESTRAL SPECIES	1	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Donkey	MODERN SPECIES	18	ENSEASG00005021433	ENSEASG00005034943	ENSEASG00005021442 #9	FAM187B (ENSEASG00005000110) #10	LSR (ENSEASG00005000162) #11	USF2 (ENSEASG00005000179) #12	HAMP (ENSEASG00005034625) #13	MAG (ENSEASG00005000222) #14	CD22 (ENSEASG00005000246) #15	FFAR1 (ENSEASG00005024232) #16	ENSEASG00005000407 #17	FFAR2 (ENSEASG00005000417) #18	ENSEASG00005025822 #19	ENSEASG00005000457 #20	SBSN (ENSEASG00005000465) #21	GAPDHS (ENSEASG00005000498) #22	TMEM147 (ENSEASG00005000848) #23	ATP4A (ENSEASG00005000923) #24	ENSEASG00005033353 #25	PMIS2 (ENSEASG00005027065) #26	HAUS5 (ENSEASG00005001069) #27	RBM42 (ENSEASG00005001074) #28	ETV2 (ENSEASG00005001080) #29	ENSEASG00005001105 #30	UPK1A (ENSEASG00005001143) #31	ZBTB32 (ENSEASG00005001159) #32	IGFLR1 (ENSEASG00005001195) #34	ENSEASG00005001205 #35	ENSEASG00005032356 #36	LIN37 (ENSEASG00005001319)	HSPB6 (ENSEASG00005023773)
Horse	MODERN SPECIES	1	FXYD3 (ENSECAG00000016498)	LGI4 (ENSECAG00000021101) #7	ENSECAG00000028572	FXYD5 (ENSECAG00000019410)	FAM187B (ENSECAG00000022191) #10	LSR (ENSECAG00000022420) #11	USF2 (ENSECAG00000008583) #12	ENSECAG00000037842 #13	MAG (ENSECAG00000011028) #14	CD22 (ENSECAG00000021515) #15	ENSECAG00000005179 #17	FFAR2 (ENSECAG00000005226) #18	KRTDAP (ENSECAG00000025001) #19	ENSECAG00000025084 #20	SBSN (ENSECAG00000030532) #21	GAPDHS (ENSECAG00000003757) #22	ATP4A (ENSECAG00000013121) #24	TMEM147 (ENSECAG00000011975) #23	ENSECAG00000028076 #25	PMIS2 (ENSECAG00000057801) #26	HAUS5 (ENSECAG00000012035) #27	ENSECAG00000054920	RBM42 (ENSECAG00000018215) #28	ETV2 (ENSECAG00000010488) #29	UPK1A (ENSECAG00000012871) #31	ZBTB32 (ENSECAG00000005671) #32	KMT2B (ENSECAG00000007605) #33	IGFLR1 (ENSECAG00000017838) #34	U2AF1L4 (ENSECAG00000017941) #35	LIN37 (ENSECAG00000010678)	HSPB6 (ENSECAG00000039018)
Carnivora	ANCESTRAL SPECIES	2	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Caniformia	ANCESTRAL SPECIES	1	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Canidae	ANCESTRAL SPECIES	5	ENSGT00940000153062.A.b.a	ENSGT00990000203831.a #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.db.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831.a #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.db.a.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Dingo	MODERN SPECIES	125	SCN1B (ENSCAFG00020019378)	HPN (ENSCAFG00020019300)	LGI4 (ENSCAFG00020019268) #7	FXYD1 (ENSCAFG00020019261)	FAM187B (ENSCAFG00020019249) #10	LSR (ENSCAFG00020019242) #11	USF2 (ENSCAFG00020019212) #12	HAMP (ENSCAFG00020019205) #13	MAG (ENSCAFG00020019192) #14	CD22 (ENSCAFG00020019159) #15	FFAR1 (ENSCAFG00020019154) #16	ENSCAFG00020019153 #17	FFAR2 (ENSCAFG00020019149) #18	ENSCAFG00020019143	SBSN (ENSCAFG00020019121) #21	GAPDHS (ENSCAFG00020019104) #22	TMEM147 (ENSCAFG00020019089) #23	ATP4A (ENSCAFG00020018799) #24	ENSCAFG00020018763 #25	ENSCAFG00020018759 #26	HAUS5 (ENSCAFG00020018708) #27	RBM42 (ENSCAFG00020018628) #28	ENSCAFG00020018622 #29	ENSCAFG00020018620 #30	UPK1A (ENSCAFG00020018615) #31	ZBTB32 (ENSCAFG00020018613) #32	KMT2B (ENSCAFG00020018550) #33	ENSCAFG00020018542 #34	U2AF1L4 (ENSCAFG00020018413) #35	PSENEN (ENSCAFG00020018408) #36	LIN37 (ENSCAFG00020018388)
Dog	MODERN SPECIES		LGI4 (ENSCAFG00845003561) #7	FXYD1 (ENSCAFG00845003545)	FXYD7 (ENSCAFG00845003521)	ENSCAFG00845003498 #9	FAM187B (ENSCAFG00845003484) #10	LSR (ENSCAFG00845003408) #11	USF2 (ENSCAFG00845003264) #12	HAMP (ENSCAFG00845003240) #13	MAG (ENSCAFG00845003158) #15	FFAR1 (ENSCAFG00845003077) #16	ENSCAFG00845003060 #17	FFAR2 (ENSCAFG00845003045) #18	KRTDAP (ENSCAFG00845003011) #19	ENSCAFG00845002671	SBSN (ENSCAFG00845002436) #21	GAPDHS (ENSCAFG00845002405) #22	TMEM147 (ENSCAFG00845002384) #23	ENSCAFG00845002368 #26	ENSCAFG00845002357 #25	ATP4A (ENSCAFG00845002265) #24	HAUS5 (ENSCAFG00845002162) #27	RBM42 (ENSCAFG00845002092) #28	ETV2 (ENSCAFG00845002002) #29	ENSCAFG00845001977 #30	UPK1A (ENSCAFG00845001931) #31	ZBTB32 (ENSCAFG00845001881) #32	KMT2B (ENSCAFG00845001587) #33	IGFLR1 (ENSCAFG00845001429) #34	U2AF1L4 (ENSCAFG00845001465) #35	PSENEN (ENSCAFG00845001404) #36	LIN37 (ENSCAFG00845001383)
Red fox	MODERN SPECIES	80	HPN (ENSVVUG00000015348)	LGI4 (ENSVVUG00000015287) #7	FXYD1 (ENSVVUG00000015265)	ENSVVUG00000015256 #9	FAM187B (ENSVVUG00000015250) #10	LSR (ENSVVUG00000015238) #11	USF2 (ENSVVUG00000015236) #12	ENSVVUG00000015230 #13	MAG (ENSVVUG00000015217) #14	CD22 (ENSVVUG00000015193) #15	ENSVVUG00000015187 #17	ENSVVUG00000015169 ##18	FFAR2 (ENSVVUG00000015165) #18	ENSVVUG00000015154	SBSN (ENSVVUG00000015151) #21	GAPDHS (ENSVVUG00000015145) #22	TMEM147 (ENSVVUG00000015138) #23	ATP4A (ENSVVUG00000015135) #24	ENSVVUG00000015133 #25	ENSVVUG00000015130 #26	HAUS5 (ENSVVUG00000015126) #27	RBM42 (ENSVVUG00000015117) #28	ETV2 (ENSVVUG00000015116) #29	ENSVVUG00000015110 #30	UPK1A (ENSVVUG00000015095) #31	ZBTB32 (ENSVVUG00000015089) #32	ENSVVUG00000015004 #34	U2AF1L4 (ENSVVUG00000015000) #35	PSENEN (ENSVVUG00000014996) #36	LIN37 (ENSVVUG00000014985)	HSPB6 (ENSVVUG00000014980)
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Mustelinae	ANCESTRAL SPECIES	49	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
American mink	MODERN SPECIES	95	FXYD7 (ENSNVIG00000018742)	ENSNVIG00000018718 #9	FAM187B (ENSNVIG00000018707) #10	LSR (ENSNVIG00000018595) #11	USF2 (ENSNVIG00000018485) #12	HAMP (ENSNVIG00000018472) #13	MAG (ENSNVIG00000018441) #14	CD22 (ENSNVIG00000018428) #15	FFAR1 (ENSNVIG00000018419) #16	ENSNVIG00000018413 #17	ENSNVIG00000018399 ##18	FFAR2 (ENSNVIG00000018396) #18	KRTDAP (ENSNVIG00000018369) #19	DMKN (ENSNVIG00000017988)	ENSNVIG00000017941 #21	GAPDHS (ENSNVIG00000017925) #22	TMEM147 (ENSNVIG00000017907) #23	ATP4A (ENSNVIG00000017868) #24	ENSNVIG00000017854 #26	HAUS5 (ENSNVIG00000017793) #27	RBM42 (ENSNVIG00000017619) #28	ETV2 (ENSNVIG00000017600) #29	COX6B1 (ENSNVIG00000017583) #30	UPK1A (ENSNVIG00000017564) #31	ZBTB32 (ENSNVIG00000017543) #32	KMT2B (ENSNVIG00000017248) #33	IGFLR1 (ENSNVIG00000017201) #34	U2AF1L4 (ENSNVIG00000017162) #35	PEN2 (ENSNVIG00000017156) #36	LIN37 (ENSNVIG00000017135)	HSPB6 (ENSNVIG00000017126)
Ferret	MODERN SPECIES	272	HPN (ENSMPUG00000007205)	LGI4 (ENSMPUG00000007193) #7	FXYD1 (ENSMPUG00000007156)	ENSMPUG00000007127 #9	FAM187B (ENSMPUG00000007118) #10	LSR (ENSMPUG00000007111) #11	USF2 (ENSMPUG00000007099) #12	MAG (ENSMPUG00000007014) #14	CD22 (ENSMPUG00000007004) #15	ENSMPUG00000006996 #17	ENSMPUG00000018933 ##18	KRTDAP (ENSMPUG00000006987) #19	DMKN (ENSMPUG00000006911)	SBSN (ENSMPUG00000006888) #21	ENSMPUG00000006885	GAPDHS (ENSMPUG00000006759) #22	TMEM147 (ENSMPUG00000006709) #23	ATP4A (ENSMPUG00000006335) #24	ENSMPUG00000006325	ENSMPUG00000006314	HAUS5 (ENSMPUG00000006300) #27	RBM42 (ENSMPUG00000006288) #28	ETV2 (ENSMPUG00000006282) #29	ENSMPUG00000006258 #30	UPK1A (ENSMPUG00000006248) #31	ZBTB32 (ENSMPUG00000006234) #32	KMT2B (ENSMPUG00000006206) #33	IGFLR1 (ENSMPUG00000006182) #34	U2AF1L4 (ENSMPUG00000006135) #35	PSENEN (ENSMPUG00000006119) #36	LIN37 (ENSMPUG00000006109)
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b.a #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Ursus	ANCESTRAL SPECIES	86	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b.a #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100.f
Polar bear	MODERN SPECIES	480	ENSUMAG00000018407 #8	ENSUMAG00000018409 #9	FAM187B (ENSUMAG00000018415) #10	LSR (ENSUMAG00000018424) #11	ENSUMAG00000018430 #12	HAMP (ENSUMAG00000018434) #13	MAG (ENSUMAG00000018441) #14	CD22 (ENSUMAG00000018467) #15	FFAR1 (ENSUMAG00000018472) #16	ENSUMAG00000018475 #17	ENSUMAG00000018478 ##18	FFAR2 (ENSUMAG00000018482) #18	KRTDAP (ENSUMAG00000018488) #19	ENSUMAG00000018497 #20	SBSN (ENSUMAG00000018524) #21	GAPDHS (ENSUMAG00000018537) #22	ENSUMAG00000018584 #23	ATP4A (ENSUMAG00000018785) #24	ENSUMAG00000020204 #26	HAUS5 (ENSUMAG00000020214) #27	RBM42 (ENSUMAG00000020223) #28	ENSUMAG00000020231 #29	ENSUMAG00000020235 #30	UPK1A (ENSUMAG00000020246) #31	ENSUMAG00000020255 #32	KMT2B (ENSUMAG00000020267) #33	ENSUMAG00000020344 #34	U2AF1L4 (ENSUMAG00000020355) #35	PSENEN (ENSUMAG00000020396) #36	LIN37 (ENSUMAG00000020401)	HSPB6 (ENSUMAG00000020421)
American black bear	MODERN SPECIES	86								ENSUAMG00000020752 #14	CD22 (ENSUAMG00000020742) #15	FFAR1 (ENSUAMG00000020738) #16	ENSUAMG00000020736 #17	ENSUAMG00000020735 ##18	FFAR2 (ENSUAMG00000020734) #18	KRTDAP (ENSUAMG00000020732) #19	ENSUAMG00000020731 #21	GAPDHS (ENSUAMG00000020729) #22	ENSUAMG00000020726 #23	ATP4A (ENSUAMG00000020718) #24	ENSUAMG00000020715 #26	HAUS5 (ENSUAMG00000020714) #27	RBM42 (ENSUAMG00000020711) #28	ENSUAMG00000020710	ENSUAMG00000020709 #29	ENSUAMG00000020708 #30	UPK1A (ENSUAMG00000020707) #31	ZBTB32 (ENSUAMG00000020706) #32	KMT2B (ENSUAMG00000020700) #33	IGFLR1 (ENSUAMG00000020698) #34	U2AF1L4 (ENSUAMG00000020697) #35	PSENEN (ENSUAMG00000020696) #36	LIN37 (ENSUAMG00000020695)
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	3	LGI4 (ENSAMEG00000000204) #7	ENSAMEG00000026099	ENSAMEG00000025591 #9	FAM187B (ENSAMEG00000031519) #10	LSR (ENSAMEG00000000228) #11	USF2 (ENSAMEG00000000235) #12	MAG (ENSAMEG00000000245) #14	CD22 (ENSAMEG00000000269) #15	FFAR1 (ENSAMEG00000019226) #16	ENSAMEG00000019249 #17	ENSAMEG00000000289 ##18	ENSAMEG00000026764 #18	KRTDAP (ENSAMEG00000026794) #19	DMKN (ENSAMEG00000000298)	ENSAMEG00000031164 #21	GAPDHS (ENSAMEG00000000349) #22	TMEM147 (ENSAMEG00000023779) #23	ATP4A (ENSAMEG00000000397) #24	ENSAMEG00000000502 #25	PMIS2 (ENSAMEG00000029504) #26	HAUS5 (ENSAMEG00000000503) #27	RBM42 (ENSAMEG00000000524) #28	ETV2 (ENSAMEG00000000548) #29	ENSAMEG00000000563 #30	UPK1A (ENSAMEG00000000567) #31	ZBTB32 (ENSAMEG00000000589) #32	ENSAMEG00000000319 #33	IGFLR1 (ENSAMEG00000000590) #34	U2AF1L4 (ENSAMEG00000000592) #35	PSENEN (ENSAMEG00000000612) #36	LIN37 (ENSAMEG00000000620)
Giant Panda	MODERN SPECIES	1946																ENSAMEG00000028417 #22
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.bb #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Cat	MODERN SPECIES	246	ENSFCAG00000042895 #9	FAM187B (ENSFCAG00000041076) #10	LSR (ENSFCAG00000008893) #11	USF2 (ENSFCAG00000008894) #12	HAMP (ENSFCAG00000040064) #13	MAG (ENSFCAG00000008896) #14	CD22 (ENSFCAG00000008898) #15	FFAR1 (ENSFCAG00000006103) #16	ENSFCAG00000008900 #17	ENSFCAG00000029218 ##18	ENSFCAG00000050218	FFAR2 (ENSFCAG00000008903) #18	KRTDAP (ENSFCAG00000006507) #19	DMKN (ENSFCAG00000045311)	SBSN (ENSFCAG00000023717) #21	GAPDHS (ENSFCAG00000006369) #22	TMEM147 (ENSFCAG00000006373) #23	ATP4A (ENSFCAG00000006374) #24	ENSFCAG00000032280 #26	HAUS5 (ENSFCAG00000028456) #27	RBM42 (ENSFCAG00000006376) #28	ETV2 (ENSFCAG00000006377) #29	ENSFCAG00000037172 #30	UPK1A (ENSFCAG00000024581) #31	ZBTB32 (ENSFCAG00000006380) #32	KMT2B (ENSFCAG00000006381) #33	IGFLR1 (ENSFCAG00000036461) #34	U2AF1L4 (ENSFCAG00000006383) #35	PSENEN (ENSFCAG00000030316) #36	LIN37 (ENSFCAG00000006385)	HSPB6 (ENSFCAG00000006386)
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.bb #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Tiger	DUPLICATION
Tiger	MODERN SPECIES	547	ENSPTIG00000008131 #9	FAM187B (ENSPTIG00000009691) #10	LSR (ENSPTIG00000009936) #11	USF2 (ENSPTIG00000010929) #12	HAMP (ENSPTIG00000011323) #13	ENSPTIG00000011572 ##14	ENSPTIG00000011783	CD22 (ENSPTIG00000012256) #15	FFAR1 (ENSPTIG00000005649) #16	ENSPTIG00000005656 #17	ENSPTIG00000005662 ##18	FFAR2 (ENSPTIG00000005675) #18	KRTDAP (ENSPTIG00000015137) #19	ENSPTIG00000015829 #20	ENSPTIG00000016489 #21	GAPDHS (ENSPTIG00000016979) #22	TMEM147 (ENSPTIG00000017455) #23	ATP4A (ENSPTIG00000017666) #24	HAUS5 (ENSPTIG00000018393) #27	RBM42 (ENSPTIG00000019270) #28	ENSPTIG00000020392 #29	ENSPTIG00000020613 #30	UPK1A (ENSPTIG00000020889) #31	ZBTB32 (ENSPTIG00000021084) #32	KMT2B (ENSPTIG00000003279) #33	ENSPTIG00000006579 #34	U2AF1L4 (ENSPTIG00000007065) #35	PSENEN (ENSPTIG00000007705) #36	LIN37 (ENSPTIG00000008240)	ENSPTIG00000008527	ARHGAP33 (ENSPTIG00000009689)
Tiger	MODERN SPECIES	186												ATP13A5 (ENSPTIG00000011260)	PLAAT1 (ENSPTIG00000014270)	MB21D2 (ENSPTIG00000015590)	FGF12 (ENSPTIG00000016372)	ENSPTIG00000000734 #22	CCDC50 (ENSPTIG00000018029)	UTS2B (ENSPTIG00000021448)	OSTN (ENSPTIG00000021737)	GMNC (ENSPTIG00000002630)	IL1RAP (ENSPTIG00000005696)	TMEM207 (ENSPTIG00000014639)	CLDN16 (ENSPTIG00000014978)	CLDN1 (ENSPTIG00000015844)	P3H2 (ENSPTIG00000016608)	TP63 (ENSPTIG00000019632)	TPRG1 (ENSPTIG00000020804)	LPP (ENSPTIG00000021260)	BCL6 (ENSPTIG00000022010)	ENSPTIG00000002216	RTP2 (ENSPTIG00000022101)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.bb #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
leopard	MODERN SPECIES	93	FXYD7 (ENSPPRG00000010380)	ENSPPRG00000010309 #9	FAM187B (ENSPPRG00000010235) #10	LSR (ENSPPRG00000009991) #11	USF2 (ENSPPRG00000008153) #12	HAMP (ENSPPRG00000006819) #13	MAG (ENSPPRG00000006648) #14	CD22 (ENSPPRG00000005442) #15	FFAR1 (ENSPPRG00000021183) #16	ENSPPRG00000021171 #17	ENSPPRG00000001974 ##18	FFAR2 (ENSPPRG00000000463) #18	KRTDAP (ENSPPRG00000022812) #19	ENSPPRG00000023396 #20	ENSPPRG00000024008 #21	GAPDHS (ENSPPRG00000024135) #22	TMEM147 (ENSPPRG00000024420) #23	ATP4A (ENSPPRG00000024639) #24	HAUS5 (ENSPPRG00000018853) #27	RBM42 (ENSPPRG00000016784) #28	ENSPPRG00000009509 #29	ENSPPRG00000009043 #30	UPK1A (ENSPPRG00000008517) #31	ZBTB32 (ENSPPRG00000008152) #32	KMT2B (ENSPPRG00000006643) #33	ENSPPRG00000003696 #34	U2AF1L4 (ENSPPRG00000002986) #35	PSENEN (ENSPPRG00000002028) #36	LIN37 (ENSPPRG00000001795)	HSPB6 (ENSPPRG00000001649)	ENSPPRG00000001331
lion	MODERN SPECIES	15	FXYD7 (ENSPLOG00000007962)	ENSPLOG00000007930 #9	FAM187B (ENSPLOG00000007902) #10	LSR (ENSPLOG00000007616) #11	USF2 (ENSPLOG00000007492) #12	HAMP (ENSPLOG00000007446) #13	MAG (ENSPLOG00000007346) #14	CD22 (ENSPLOG00000007185) #15	FFAR1 (ENSPLOG00000007148) #16	ENSPLOG00000007133 #17	ENSPLOG00000007116 ##18	FFAR2 (ENSPLOG00000007096) #18	KRTDAP (ENSPLOG00000019734) #19	DMKN (ENSPLOG00000017589)	ENSPLOG00000017095 #21	GAPDHS (ENSPLOG00000017006) #22	TMEM147 (ENSPLOG00000016861) #23	ATP4A (ENSPLOG00000016664) #24	ENSPLOG00000016622 #26	HAUS5 (ENSPLOG00000016394) #27	RBM42 (ENSPLOG00000016213) #28	ETV2 (ENSPLOG00000016106) #29	ENSPLOG00000016062 #30	UPK1A (ENSPLOG00000015997) #31	ZBTB32 (ENSPLOG00000015935) #32	ENSPLOG00000015915	KMT2B (ENSPLOG00000015846) #33	IGFLR1 (ENSPLOG00000015745) #34	U2AF1L4 (ENSPLOG00000015594) #35	PSENEN (ENSPLOG00000015531) #36	LIN37 (ENSPLOG00000015482)
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Suina	ANCESTRAL SPECIES	2	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Chacoan peccary	MODERN SPECIES	104	ENSCWAG00000007253 #8	ENSCWAG00000007223 #9	FAM187B (ENSCWAG00000007199) #10	LSR (ENSCWAG00000007123) #11	USF2 (ENSCWAG00000006837) #12	HAMP (ENSCWAG00000006782) #13	MAG (ENSCWAG00000006628) #14	ENSCWAG00000006489 #15	FFAR1 (ENSCWAG00000006463) #16	ENSCWAG00000006434 #17	ENSCWAG00000006417 ##18	FFAR2 (ENSCWAG00000006396) #18	KRTDAP (ENSCWAG00000006332) #19	DMKN (ENSCWAG00000005998)	ENSCWAG00000005935 #21	GAPDHS (ENSCWAG00000005881) #22	TMEM147 (ENSCWAG00000005822) #23	ATP4A (ENSCWAG00000005676) #24	ENSCWAG00000005635 #25	ENSCWAG00000005617 #26	HAUS5 (ENSCWAG00000005532) #27	RBM42 (ENSCWAG00000005356) #28	ETV2 (ENSCWAG00000005218) #29	COX6B1 (ENSCWAG00000005180) #30	UPK1A (ENSCWAG00000005136) #31	ZBTB32 (ENSCWAG00000005096) #32	KMT2B (ENSCWAG00000004975) #33	ENSCWAG00000004945 #34	ENSCWAG00000004871 #35	PSENEN (ENSCWAG00000004846) #36	LIN37 (ENSCWAG00000004803)
Pig	MODERN SPECIES	14	LGI4 (ENSSSCG00000025126) #7	ENSSSCG00000021374	ENSSSCG00000025499 #9	FAM187B (ENSSSCG00000027989) #10	LSR (ENSSSCG00000002884) #11	USF2 (ENSSSCG00000002885) #12	HAMP (ENSSSCG00000035436) #13	MAG (ENSSSCG00000002887) #14	CD22 (ENSSSCG00000002893) #15	ENSSSCG00000002891 #17	ENSSSCG00000036427 ##18	FFAR2 (ENSSSCG00000032438) #18	KRTDAP (ENSSSCG00000002882) #19	DMKN (ENSSSCG00000041481)	SBSN (ENSSSCG00000033702) #21	GAPDHS (ENSSSCG00000002888) #22	TMEM147 (ENSSSCG00000040012) #23	ATP4A (ENSSSCG00000002902) #24	ENSSSCG00000041083 #25	ENSSSCG00000038292 #26	HAUS5 (ENSSSCG00000002904) #27	RBM42 (ENSSSCG00000002905) #28	ETV2 (ENSSSCG00000002906) #29	ENSSSCG00000002907 #30	UPK1A (ENSSSCG00000002901) #31	ZBTB32 (ENSSSCG00000002908) #32	KMT2B (ENSSSCG00000002895) #33	ENSSSCG00000037542 #34	U2AF1L4 (ENSSSCG00000035162) #35	PSENEN (ENSSSCG00000032059) #36	LIN37 (ENSSSCG00000002898)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01050000245939	ENSGT00390000016486 #25	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01050000245939	ENSGT00390000016486 #25	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01050000245939	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.q #23	ENSGT00940000160297 #24	ENSGT01050000245939	ENSGT00390000016486 #25	ENSGT00390000004044.hb.a.a	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35
Narwhal	MODERN SPECIES	296	ENSMMNG00015003647	ENSMMNG00015003684 #9	FAM187B (ENSMMNG00015003714) #10	LSR (ENSMMNG00015003800) #11	USF2 (ENSMMNG00015003953) #12	HAMP (ENSMMNG00015004020) #13	MAG (ENSMMNG00015004054) #14	CD22 (ENSMMNG00015004122) #15	FFAR1 (ENSMMNG00015004171) #16	ENSMMNG00015004187 #17	FFAR2 (ENSMMNG00015004195) #18	KRTDAP (ENSMMNG00015004215) #19	ENSMMNG00015004281 #20	ENSMMNG00015004350	ENSMMNG00015004357 #21	GAPDHS (ENSMMNG00015004376) #22	ENSMMNG00015004406 #23	ATP4A (ENSMMNG00015004439) #24	ENSMMNG00015004468	ENSMMNG00015004482 #25	ENSMMNG00015004496	ENSMMNG00015004505 #26	HAUS5 (ENSMMNG00015004522) #27	RBM42 (ENSMMNG00015004566) #28	ETV2 (ENSMMNG00015004583) #29	COX6B1 (ENSMMNG00015000013) #30	UPK1A (ENSMMNG00015000036) #31	ZBTB32 (ENSMMNG00015000064) #32	KMT2B (ENSMMNG00015000167) #33	ENSMMNG00015000311 #34	U2AF1L4 (ENSMMNG00015000339) #35
Beluga whale	MODERN SPECIES	14	ENSDLEG00000003169	ENSDLEG00000003160 #8	ENSDLEG00000003142 #9	ENSDLEG00000003132 #10	LSR (ENSDLEG00000003111) #11	USF2 (ENSDLEG00000003091) #12	HAMP (ENSDLEG00000003073) #13	MAG (ENSDLEG00000003017) #14	CD22 (ENSDLEG00000003003) #15	FFAR1 (ENSDLEG00000002995) #16	ENSDLEG00000002990 #17	FFAR2 (ENSDLEG00000002986) #18	KRTDAP (ENSDLEG00000002979) #19	ENSDLEG00000002968	ENSDLEG00000002964 #21	GAPDHS (ENSDLEG00000002949) #22	ENSDLEG00000002916 #23	ATP4A (ENSDLEG00000002880) #24	ENSDLEG00000002861	ENSDLEG00000002855 #25	ENSDLEG00000002848	HAUS5 (ENSDLEG00000002825) #27	RBM42 (ENSDLEG00000002813) #28	ENSDLEG00000002783 #29	COX6B1 (ENSDLEG00000002757) #30	UPK1A (ENSDLEG00000002748) #31	ZBTB32 (ENSDLEG00000002723) #32	KMT2B (ENSDLEG00000002696) #33	ENSDLEG00000002681 #34	U2AF1L4 (ENSDLEG00000002617) #35	PSENEN (ENSDLEG00000002605) #36
Vaquita	MODERN SPECIES	10	FXYD1 (ENSPSNG00000017744)	ENSPSNG00000017696 #9	FAM187B (ENSPSNG00000017647) #10	LSR (ENSPSNG00000017484) #11	USF2 (ENSPSNG00000017336) #12	HAMP (ENSPSNG00000017268) #13	MAG (ENSPSNG00000016970) #14	CD22 (ENSPSNG00000016312) #15	FFAR1 (ENSPSNG00000016199) #16	ENSPSNG00000016146 #17	FFAR2 (ENSPSNG00000016127) #18	KRTDAP (ENSPSNG00000015958) #19	ENSPSNG00000015838 #20	ENSPSNG00000015775	ENSPSNG00000015686	GAPDHS (ENSPSNG00000015544) #22	ENSPSNG00000015453 #23	ATP4A (ENSPSNG00000015146) #24	ENSPSNG00000015103	ENSPSNG00000015069 #25	HAUS5 (ENSPSNG00000015008) #27	RBM42 (ENSPSNG00000014747) #28	ENSPSNG00000014624 #29	COX6B1 (ENSPSNG00000014563) #30	UPK1A (ENSPSNG00000014509) #31	ZBTB32 (ENSPSNG00000014422) #32	KMT2B (ENSPSNG00000013434) #33	ENSPSNG00000013247 #34	PSENEN (ENSPSNG00000013172) #36	LIN37 (ENSPSNG00000013105)	HSPB6 (ENSPSNG00000013049)
Dolphin	MODERN SPECIES	3813												FFAR2 (ENSTTRG00000015162) #18	KRTDAP (ENSTTRG00000015156) #19	DMKN (ENSTTRG00000015144)	ENSTTRG00000015130 #21	GAPDHS (ENSTTRG00000015124) #22	TMEM147 (ENSTTRG00000015114) #23	ATP4A (ENSTTRG00000015108) #24	HAUS5 (ENSTTRG00000015104) #27
Sperm whale	MODERN SPECIES	1009															ENSPCTG00005013281 #21	GAPDHS (ENSPCTG00005013339) #22	TMEM147 (ENSPCTG00005013514) #23
Blue whale	MODERN SPECIES	10	ENSBMSG00010016037 #8	ENSBMSG00010016018 #9	FAM187B (ENSBMSG00010016000) #10	LSR (ENSBMSG00010015787) #11	USF2 (ENSBMSG00010015642) #12	HAMP (ENSBMSG00010015599) #13	MAG (ENSBMSG00010015427) #14	CD22 (ENSBMSG00010014928) #15	FFAR1 (ENSBMSG00010014846) #16	ENSBMSG00010014830 ##18	FFAR2 (ENSBMSG00010014819) #18	KRTDAP (ENSBMSG00010014801) #19	ENSBMSG00010014769 #20	ENSBMSG00010014751	ENSBMSG00010014715 #21	GAPDHS (ENSBMSG00010014639) #22	ATP4A (ENSBMSG00010014535) #24	ENSBMSG00010014517	PMIS2 (ENSBMSG00010014489) #26	HAUS5 (ENSBMSG00010014394) #27	RBM42 (ENSBMSG00010014233) #28	ENSBMSG00010014159 #29	COX6B1 (ENSBMSG00010014123) #30	UPK1A (ENSBMSG00010022105) #31	ZBTB32 (ENSBMSG00010022100) #32	KMT2B (ENSBMSG00010022090) #33	U2AF1L4 (ENSBMSG00010022081) #35	IGFLR1 (ENSBMSG00010022083) #34	PSENEN (ENSBMSG00010022076) #36	LIN37 (ENSBMSG00010022068)	HSPB6 (ENSBMSG00010022063)
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.o.a #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Yarkand deer	MODERN SPECIES	27	FXYD5 (ENSCHYG00000011887)	FAM187B (ENSCHYG00000011934) #10	ENSCHYG00000011954 #11	ENSCHYG00000012037 #11	USF2 (ENSCHYG00000012075) #12	HAMP (ENSCHYG00000012289) #13	MAG (ENSCHYG00000012332) #14	CD22 (ENSCHYG00000012459) #15	FFAR1 (ENSCHYG00000012550) #16	ENSCHYG00000012560 #17	ENSCHYG00000012580 ##18	FFAR2 (ENSCHYG00000005090) #18	KRTDAP (ENSCHYG00000005102) #19	ENSCHYG00000005218	SBSN (ENSCHYG00000005564) #21	GAPDHS (ENSCHYG00000005581) #22	ENSCHYG00000005621 #23	ATP4A (ENSCHYG00000005682) #24	ENSCHYG00000005769 #25	ENSCHYG00000005856	HAUS5 (ENSCHYG00000005883) #27	RBM42 (ENSCHYG00000005999) #28	ETV2 (ENSCHYG00000006493) #29	COX6B1 (ENSCHYG00000006644) #30	UPK1A (ENSCHYG00000006670) #31	ZBTB32 (ENSCHYG00000006715) #32	KMT2B (ENSCHYG00000006781) #33	IGFLR1 (ENSCHYG00000006966) #34	U2AF1L4 (ENSCHYG00000007042) #35	PSENEN (ENSCHYG00000007138) #36	LIN37 (ENSCHYG00000007171)
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.o.a #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.o.a #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.o.a #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Goat	MODERN SPECIES	9	LGI4 (ENSCHIG00000005629) #7	ENSCHIG00000027209	ENSCHIG00000014550 #8	FXYD5 (ENSCHIG00000026985)	FAM187B (ENSCHIG00000021244) #10	LSR (ENSCHIG00000015582) #11	USF2 (ENSCHIG00000015188) #12	HAMP (ENSCHIG00000026218) #13	MAG (ENSCHIG00000010560) #14	CD22 (ENSCHIG00000022411) #15	FFAR1 (ENSCHIG00000010852) #16	FFAR3 (ENSCHIG00000026627) #17	FFAR2 (ENSCHIG00000005922) #18	KRTDAP (ENSCHIG00000024991) #19	SBSN (ENSCHIG00000016748) #21	GAPDHS (ENSCHIG00000009710) #22	TMEM147 (ENSCHIG00000022872) #23	ATP4A (ENSCHIG00000019660) #24	ENSCHIG00000007671	HAUS5 (ENSCHIG00000017827) #27	RBM42 (ENSCHIG00000009518) #28	ENSCHIG00000025200 #29	COX6B1 (ENSCHIG00000023112) #30	UPK1A (ENSCHIG00000017664) #31	ZBTB32 (ENSCHIG00000004618) #32	KMT2B (ENSCHIG00000026671) #33	IGFLR1 (ENSCHIG00000025294) #34	U2AF1L4 (ENSCHIG00000001219) #35	PSENEN (ENSCHIG00000018444) #36	LIN37 (ENSCHIG00000018816)	HSPB6 (ENSCHIG00000007351)
Rambouillet Sheep	MODERN SPECIES	5	FXYD1 (ENSOARG00020015745)	ENSOARG00020015806 #8	FXYD5 (ENSOARG00020015963)	FAM187B (ENSOARG00020015983) #10	LSR (ENSOARG00020016020) #11	USF2 (ENSOARG00020016355) #12	HAMP (ENSOARG00020016558) #13	MAG (ENSOARG00020016615) #14	FFAR1 (ENSOARG00020016917) #16	ENSOARG00020016938 #17	ENSOARG00020016975 ##18	FFAR2 (ENSOARG00020017019) #18	KRTDAP (ENSOARG00020017041) #19	DMKN (ENSOARG00020017113)	SBSN (ENSOARG00020017668) #21	GAPDHS (ENSOARG00020017777) #22	TMEM147 (ENSOARG00020017898) #23	ATP4A (ENSOARG00020017980) #24	ENSOARG00020018163 #25	ENSOARG00020018180 #26	HAUS5 (ENSOARG00020018275) #27	RBM42 (ENSOARG00020018470) #28	ETV2 (ENSOARG00020018853) #29	COX6B1 (ENSOARG00020019003) #30	UPK1A (ENSOARG00020019046) #31	ZBTB32 (ENSOARG00020019124) #32	KMT2B (ENSOARG00020019195) #33	IGFLR1 (ENSOARG00020019965) #34	U2AF1L4 (ENSOARG00020020110) #35	PSENEN (ENSOARG00020020197) #36	LIN37 (ENSOARG00020020230)
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.o.a #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.pb.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Bos	ANCESTRAL SPECIES	4	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.o.a #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.pb.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Bos_b	ANCESTRAL SPECIES		ENSGT00940000164223 #8	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.o.a #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00530000065055	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.pb.a.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36
Cow	MODERN SPECIES	9	ENSBTAG00000051389	FAM187B (ENSBTAG00000001994) #10	LSR (ENSBTAG00000017033) #11	ENSBTAG00000031420	USF2 (ENSBTAG00000017035) #12	HAMP (ENSBTAG00000017042) #13	MAG (ENSBTAG00000017044) #14	CD22 (ENSBTAG00000011887) #15	FFAR1 (ENSBTAG00000045806) #16	FFAR3 (ENSBTAG00000013791) #17	ENSBTAG00000045656 ##18	FFAR2 (ENSBTAG00000006566) #18	KRTDAP (ENSBTAG00000005330) #19	DMKN (ENSBTAG00000015912)	SBSN (ENSBTAG00000015915) #21	GAPDHS (ENSBTAG00000015917) #22	TMEM147 (ENSBTAG00000015920) #23	ATP4A (ENSBTAG00000008777) #24	ENSBTAG00000049126 #25	ENSBTAG00000053018 #26	ENSBTAG00000047277	HAUS5 (ENSBTAG00000013436) #27	RBM42 (ENSBTAG00000013440) #28	ETV2 (ENSBTAG00000013444) #29	COX6B1 (ENSBTAG00000055082) #30	UPK1A (ENSBTAG00000020543) #31	ZBTB32 (ENSBTAG00000023611) #32	KMT2B (ENSBTAG00000002763) #33	IGFLR1 (ENSBTAG00000002764) #34	U2AF1L4 (ENSBTAG00000023610) #35	PSENEN (ENSBTAG00000018593) #36
Hybrid Bos Indicus	MODERN SPECIES	9	ENSBIXG00005000134	FXYD5 (ENSBIXG00005000138)	FAM187B (ENSBIXG00005008223) #10	LSR (ENSBIXG00005008370) #11	HAMP (ENSBIXG00005000180) #13	MAG (ENSBIXG00005008473) #14	ENSBIXG00005008488	CD22 (ENSBIXG00005008589) #15	FFAR1 (ENSBIXG00005008608) #16	ENSBIXG00005005355 #17	ENSBIXG00005008629 ##18	FFAR2 (ENSBIXG00005008633) #18	KRTDAP (ENSBIXG00005008661) #19	ENSBIXG00005006762	SBSN (ENSBIXG00005008794) #21	GAPDHS (ENSBIXG00005008825) #22	ENSBIXG00005008881 #23	ATP4A (ENSBIXG00005008923) #24	ENSBIXG00005008940 #25	ENSBIXG00005005576 #26	ENSBIXG00005000343	HAUS5 (ENSBIXG00005008995) #27	RBM42 (ENSBIXG00005009075) #28	ETV2 (ENSBIXG00005009145) #29	ENSBIXG00005009170 #30	UPK1A (ENSBIXG00005009199) #31	ZBTB32 (ENSBIXG00005009218) #32	KMT2B (ENSBIXG00005009369) #33	IGFLR1 (ENSBIXG00005009434) #34	U2AF1L4 (ENSBIXG00005009479) #35	PSENEN (ENSBIXG00005009498) #36
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000153062.A.b.a	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276.o.a.a #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204.pb.a #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748
Wild yak	MODERN SPECIES	2217									CD22 (ENSBMUG00000016471) #15	ENSBMUG00000016478 #17	ENSBMUG00000016486 ##18	FFAR2 (ENSBMUG00000016509) #18	KRTDAP (ENSBMUG00000016524) #19	DMKN (ENSBMUG00000016690)	SBSN (ENSBMUG00000016732) #21	GAPDHS (ENSBMUG00000016744) #22	ENSBMUG00000016771 #23	ATP4A (ENSBMUG00000016789) #24	ENSBMUG00000016807 #25	ENSBMUG00000016814 #26	ENSBMUG00000016881	HAUS5 (ENSBMUG00000016941) #27	RBM42 (ENSBMUG00000017046) #28	ENSBMUG00000017098 #29	ENSBMUG00000017112 #30	UPK1A (ENSBMUG00000017134) #31	ZBTB32 (ENSBMUG00000017156) #32	KMT2B (ENSBMUG00000017206) #33	IGFLR1 (ENSBMUG00000017257) #34	U2AF1L4 (ENSBMUG00000017290) #35	PSENEN (ENSBMUG00000017304) #36
Domestic yak	MODERN SPECIES	12	FAM187B (ENSBGRG00000016484) #10	LSR (ENSBGRG00000016208) #11	USF2 (ENSBGRG00000015949) #12	HAMP (ENSBGRG00000015883) #13	ENSBGRG00000015791	MAG (ENSBGRG00000015461) #14	CD22 (ENSBGRG00000015347) #15	FFAR1 (ENSBGRG00000015331) #16	ENSBGRG00000015316 #17	ENSBGRG00000015267 ##18	FFAR2 (ENSBGRG00000015233) #18	KRTDAP (ENSBGRG00000015032) #19	ENSBGRG00000014957 #20	ENSBGRG00000014899	SBSN (ENSBGRG00000025300) #21	GAPDHS (ENSBGRG00000025264) #22	ENSBGRG00000025246 #23	ATP4A (ENSBGRG00000025191) #24	ENSBGRG00000025179 #25	ENSBGRG00000025163 #26	ENSBGRG00000025147	HAUS5 (ENSBGRG00000025110) #27	RBM42 (ENSBGRG00000025041) #28	ETV2 (ENSBGRG00000025016) #29	ENSBGRG00000024995 #30	UPK1A (ENSBGRG00000024971) #31	ZBTB32 (ENSBGRG00000024956) #32	KMT2B (ENSBGRG00000024842) #33	IGFLR1 (ENSBGRG00000024811) #34	U2AF1L4 (ENSBGRG00000024701) #35	PSENEN (ENSBGRG00000024672) #36
American bison	MODERN SPECIES	3196	LGI4 (ENSBBBG00000008710) #7	FXYD1 (ENSBBBG00000006293)	ENSBBBG00000024174 #8	FAM187B (ENSBBBG00000024140) #10	LSR (ENSBBBG00000024097) #11	USF2 (ENSBBBG00000023933) #12	HAMP (ENSBBBG00000006227) #13	MAG (ENSBBBG00000000307) #14	CD22 (ENSBBBG00000008422) #15	FFAR1 (ENSBBBG00000023761) #16	ENSBBBG00000023756 #17	FFAR2 (ENSBBBG00000023740) #18	KRTDAP (ENSBBBG00000006187) #19	DMKN (ENSBBBG00000023684)	ENSBBBG00000023516 #21	GAPDHS (ENSBBBG00000023499) #22	ENSBBBG00000023470 #23	ATP4A (ENSBBBG00000023441) #24	ENSBBBG00000006120 #25	ENSBBBG00000023385 #26	HAUS5 (ENSBBBG00000023380) #27	RBM42 (ENSBBBG00000023351) #28	ETV2 (ENSBBBG00000000320) #29	ENSBBBG00000000364 #30	UPK1A (ENSBBBG00000000382) #31	ZBTB32 (ENSBBBG00000000407) #32	KMT2B (ENSBBBG00000000428) #33	IGFLR1 (ENSBBBG00000000498) #34	U2AF1L4 (ENSBBBG00000023166) #35	PSENEN (ENSBBBG00000006064) #36	LIN37 (ENSBBBG00000023109)
Siberian musk deer	MODERN SPECIES	124	ENSMMSG00000003271 #8	FXYD5 (ENSMMSG00000003263)	FAM187B (ENSMMSG00000003253) #10	LSR (ENSMMSG00000003146) #11	USF2 (ENSMMSG00000003061) #12	HAMP (ENSMMSG00000003029) #13	MAG (ENSMMSG00000002900) #14	CD22 (ENSMMSG00000002821) #15	FFAR1 (ENSMMSG00000002795) #16	ENSMMSG00000002786 #17	ENSMMSG00000002778 ##18	FFAR2 (ENSMMSG00000002765) #18	ENSMMSG00000002735 #19	DMKN (ENSMMSG00000002636)	ENSMMSG00000002580 #21	GAPDHS (ENSMMSG00000002563) #22	TMEM147 (ENSMMSG00000002506) #23	ATP4A (ENSMMSG00000002443) #24	ENSMMSG00000002417 #25	ENSMMSG00000002402 #26	HAUS5 (ENSMMSG00000002342) #27	RBM42 (ENSMMSG00000002231) #28	ENSMMSG00000002173 #30	UPK1A (ENSMMSG00000002145) #31	ZBTB32 (ENSMMSG00000002120) #32	KMT2B (ENSMMSG00000002034) #33	IGFLR1 (ENSMMSG00000002006) #34	U2AF1L4 (ENSMMSG00000001978) #35	PSENEN (ENSMMSG00000001961) #36	LIN37 (ENSMMSG00000001951)	HSPB6 (ENSMMSG00000001945)
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000162018 #7	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000016486 #25	ENSGT00950000183147.A.b.b #26	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	35	LGI4 (ENSCDRG00005009089) #7	ENSCDRG00005008772	ENSCDRG00005008425	ENSCDRG00005007999 #9	ENSCDRG00005007800 #10	ENSCDRG00005007661 #11	USF2 (ENSCDRG00005007447) #12	HAMP (ENSCDRG00005007327) #13	MAG (ENSCDRG00005006891) #14	CD22 (ENSCDRG00005006580) #15	ENSCDRG00005006439 #17	FFAR2 (ENSCDRG00005006351) #18	KRTDAP (ENSCDRG00005006105) #19	DMKN (ENSCDRG00005005464)	ENSCDRG00005005068 #21	GAPDHS (ENSCDRG00005004839) #22	TMEM147 (ENSCDRG00005004586) #23	ATP4A (ENSCDRG00005004105) #24	ENSCDRG00005003869 #25	ENSCDRG00005003765 #26	HAUS5 (ENSCDRG00005003391) #27	RBM42 (ENSCDRG00005002807) #28	ETV2 (ENSCDRG00005015103) #29	COX6B1 (ENSCDRG00005015051) #30	UPK1A (ENSCDRG00005015007) #31	ZBTB32 (ENSCDRG00005014936) #32	IGFLR1 (ENSCDRG00005014376) #34	ENSCDRG00005014207 #35	PSENEN (ENSCDRG00005014154) #36	LIN37 (ENSCDRG00005014114)	HSPB6 (ENSCDRG00005014082)
Arabian camel	MODERN SPECIES	22	ENSCDRG00005002470	CDH12 (ENSCDRG00005002445)	CDH10 (ENSCDRG00005002409)	CDH9 (ENSCDRG00005002390)	ENSCDRG00005002378	ENSCDRG00005002367	CDH6 (ENSCDRG00005002349)	DROSHA (ENSCDRG00005002311)	C5orf22 (ENSCDRG00005002291)	PDZD2 (ENSCDRG00005002253)	GOLPH3 (ENSCDRG00005002236)	MTMR12 (ENSCDRG00005002210)	ZFR (ENSCDRG00005002165)	SUB1 (ENSCDRG00005002152)	NPR3 (ENSCDRG00005002141)	ENSCDRG00005002135 #22	TARS1 (ENSCDRG00005002113)	ADAMTS12 (ENSCDRG00005002046)	ENSCDRG00005002019	SLC45A2 (ENSCDRG00005001980)	AMACR (ENSCDRG00005001960)	C1QTNF3 (ENSCDRG00005001930)	ENSCDRG00005001916	RAI14 (ENSCDRG00005001840)	TTC23L (ENSCDRG00005001796)	RAD1 (ENSCDRG00005001766)	BRIX1 (ENSCDRG00005001754)	DNAJC21 (ENSCDRG00005001727)	AGXT2 (ENSCDRG00005001670)	PRLR (ENSCDRG00005001501)	SPEF2 (ENSCDRG00005001102)
Atlantogenata	ANCESTRAL SPECIES	31	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986
Afrotheria	ANCESTRAL SPECIES	99	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30
Afrotheria_a	ANCESTRAL SPECIES	85	ENSGT00940000164223 #8	ENSGT00990000203831 #9	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.n ##18	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000160881 #31	ENSGT00940000162716 #32	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986
Elephant	MODERN SPECIES	635	FXYD3 (ENSLAFG00000018057)	LGI4 (ENSLAFG00000018063) #7	ENSLAFG00000013138 #9	ENSLAFG00000001704 #10	LSR (ENSLAFG00000030859) #11	USF2 (ENSLAFG00000029360) #12	MAG (ENSLAFG00000016269) #14	CD22 (ENSLAFG00000007755) #15	FFAR1 (ENSLAFG00000031093) #16	ENSLAFG00000002901 #17	ENSLAFG00000026697 ##18	KRTDAP (ENSLAFG00000005435) #19	DMKN (ENSLAFG00000010713)	ENSLAFG00000032597 #21	FFAR2 (ENSLAFG00000005430) #18	GAPDHS (ENSLAFG00000010721) #22	TMEM147 (ENSLAFG00000021600) #23	ATP4A (ENSLAFG00000031203) #24	HAUS5 (ENSLAFG00000028684) #27	RBM42 (ENSLAFG00000014993) #28	ETV2 (ENSLAFG00000031833) #29	COX6B1 (ENSLAFG00000026061) #30	UPK1A (ENSLAFG00000006340) #31	ZBTB32 (ENSLAFG00000018739) #32	KMT2B (ENSLAFG00000018741) #33	U2AF1L4 (ENSLAFG00000012923) #35	PSENEN (ENSLAFG00000025722) #36	LIN37 (ENSLAFG00000012928)	HSPB6 (ENSLAFG00000012935)	ENSLAFG00000012937
Hyrax	MODERN SPECIES	6677															ENSPCAG00000004291 #21	GAPDHS (ENSPCAG00000004335) #22
Xenarthra	ANCESTRAL SPECIES	326							ENSGT00940000160704.b #12	ENSGT00390000003154 #13	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.m #18	ENSGT00390000009097 #19	ENSGT00570000079107	ENSGT00940000160272 #22	ENSGT00440000039148 #21	ENSGT00390000013276 #23	ENSGT00940000160297 #24
Armadillo	MODERN SPECIES	4562					USF2 (ENSDNOG00000003072) #12	ENSDNOG00000037870 #13	MAG (ENSDNOG00000001313) #14	ENSDNOG00000010038 #15	FFAR1 (ENSDNOG00000041489) #16	ENSDNOG00000018959 #17	ENSDNOG00000038360	ENSDNOG00000041430	FFAR2 (ENSDNOG00000001937) #18	KRTDAP (ENSDNOG00000040717) #19	ENSDNOG00000039686	GAPDHS (ENSDNOG00000045650) #22	ENSDNOG00000032403 #21	TMEM147 (ENSDNOG00000004059) #23	ATP4A (ENSDNOG00000004066) #24	ENSDNOG00000035894	ENSDNOG00000034160	ENSDNOG00000046962 #26	HAUS5 (ENSDNOG00000005637) #27	RBM42 (ENSDNOG00000037397) #28	ENSDNOG00000006775 #29	ENSDNOG00000046239 #30
Marsupialia	ANCESTRAL SPECIES	20	ENSGT00940000153062.A.b.a	ENSGT00940000167486	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00960000187889	ENSGT01100000263535.a.b #14	ENSGT01010000222294 #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000159510	ENSGT00940000160881 #31	ENSGT00940000161496 #33	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00940000153062.A.b.a	ENSGT00940000167486	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00960000187889	ENSGT01100000263535.a.b #14	ENSGT01010000222294.i.b #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT01020000234509	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000159510	ENSGT00940000160881 #31	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986	ENSGT00940000155110
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00940000167486	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00960000187889	ENSGT01100000263535.a.b #14	ENSGT01010000222294.i.b #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000159510	ENSGT00940000160881 #31	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986	ENSGT00940000155110
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00940000153062.C	ENSGT00940000153062.A.b.a	ENSGT00940000167486	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160704.b #12	ENSGT00960000187889	ENSGT01100000263535.a.b #14	ENSGT01010000222294.i.b #15	ENSGT00990000203619.A.b.a #16	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a #18	ENSGT00390000009097 #19	ENSGT00960000186736 #20	ENSGT00440000039148 #21	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00390000012508 #27	ENSGT00930000151055 #28	ENSGT00940000162407 #29	ENSGT00940000156204 #30	ENSGT00940000159510	ENSGT00940000160881 #31	ENSGT00390000005702 #34	ENSGT00950000183152.B.c.b #35	ENSGT00390000016319 #36	ENSGT00390000002748	ENSGT00940000161100	ENSGT00390000001986	ENSGT00940000155110
koala	MODERN SPECIES	8	ENSPCIG00000035675	ENSPCIG00000010111	LGI4 (ENSPCIG00000010112) #7	ENSPCIG00000035793	ENSPCIG00000002774 #10	LSR (ENSPCIG00000002756) #11	USF2 (ENSPCIG00000002289) #12	ENSPCIG00000036329	MAG (ENSPCIG00000002227) #14	ENSPCIG00000009550 #15	ENSPCIG00000009555 #17	FFAR2 (ENSPCIG00000009557) #18	KRTDAP (ENSPCIG00000035676) #19	ENSPCIG00000030829	ENSPCIG00000030931 #21	GAPDHS (ENSPCIG00000029222) #22	TMEM147 (ENSPCIG00000035118) #23	ATP4A (ENSPCIG00000016235) #24	HAUS5 (ENSPCIG00000015743) #27	RBM42 (ENSPCIG00000015737) #28	ENSPCIG00000015732 #29	COX6B1 (ENSPCIG00000015731) #30	NPHS1 (ENSPCIG00000015717)	UPK1A (ENSPCIG00000015705) #31	ENSPCIG00000015687 #34	U2AF1L4 (ENSPCIG00000015581) #35	PSENEN (ENSPCIG00000015575) #36	LIN37 (ENSPCIG00000015572)	HSPB6 (ENSPCIG00000015568)	ENSPCIG00000035523	ENSPCIG00000015557
Wallaby	MODERN SPECIES	9532															ENSMEUG00000009586 #21	ENSMEUG00000009590 #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000005903	LGI4 (ENSSHAG00000029675) #7	ENSSHAG00000002735 #10	LSR (ENSSHAG00000002849) #11	USF2 (ENSSHAG00000030028) #12	ENSSHAG00000025430	ENSSHAG00000027680	ENSSHAG00000006551 #15	FFAR1 (ENSSHAG00000006736) #16	ENSSHAG00000006768 #17	ENSSHAG00000006933 #18	ENSSHAG00000007336 #19	ENSSHAG00000007550	ENSSHAG00000007875 #21	ENSSHAG00000025249	ENSSHAG00000008116 #22	TMEM147 (ENSSHAG00000008214) #23	ATP4A (ENSSHAG00000008254) #24	ENSSHAG00000028186 #27	RBM42 (ENSSHAG00000025119) #28	ENSSHAG00000008931 #29	ENSSHAG00000031019 #30	UPK1A (ENSSHAG00000007322) #31	ENSSHAG00000023036 #34	PSENEN (ENSSHAG00000021867) #36	LIN37 (ENSSHAG00000000226)	HSPB6 (ENSSHAG00000009635)	ARHGAP33 (ENSSHAG00000026371)	ENSSHAG00000027141	PRODH2 (ENSSHAG00000009838)	KIRREL2 (ENSSHAG00000022115)
Opossum	MODERN SPECIES	3	ENSMODG00000042532	ENSMODG00000013812 #7	ENSMODG00000023777	ENSMODG00000023776 #10	LSR (ENSMODG00000013832) #11	USF2 (ENSMODG00000013843) #12	MAG (ENSMODG00000013859) #14	ENSMODG00000013872 #15	FFAR1 (ENSMODG00000013877) #16	ENSMODG00000023772 #17	FFAR2 (ENSMODG00000013880) #18	ENSMODG00000023771	KRTDAP (ENSMODG00000013883) #19	ENSMODG00000013891 #20	ENSMODG00000046134 #21	GAPDHS (ENSMODG00000013902) #22	TMEM147 (ENSMODG00000013908) #23	ATP4A (ENSMODG00000013928) #24	HAUS5 (ENSMODG00000044679) #27	RBM42 (ENSMODG00000013957) #28	ENSMODG00000045053 #29	COX6B1 (ENSMODG00000013962) #30	NPHS1 (ENSMODG00000013975)	UPK1A (ENSMODG00000013980) #31	ENSMODG00000013994 #33	ENSMODG00000041612 #33	ENSMODG00000013998 #34	U2AF1L4 (ENSMODG00000014003) #35	PSENEN (ENSMODG00000014006) #36	LIN37 (ENSMODG00000014013)	HSPB6 (ENSMODG00000014018)
Platypus	MODERN SPECIES	16	FBLL1 (ENSOANG00000049569)	ENSOANG00000048410	ENSOANG00000047331	SCN1B (ENSOANG00000049939)	PSMC4 (ENSOANG00000004174)	LGI4 (ENSOANG00000046214) #7	ENSOANG00000043810	ENSOANG00000028509 #11	ENSOANG00000039487 #12	ENSOANG00000045671	MAG (ENSOANG00000046428) #14	ENSOANG00000014495 #15	ENSOANG00000014494 #17	FFAR2 (ENSOANG00000014493) #18	ENSOANG00000039572	GAPDHS (ENSOANG00000008109) #22	TMEM147 (ENSOANG00000037599) #23	RBM42 (ENSOANG00000048897) #28	ENSOANG00000050246 #30	PRODH2 (ENSOANG00000037965)	ENSOANG00000012266	ENSOANG00000048846	HSPB6 (ENSOANG00000048279)	LIN37 (ENSOANG00000044418)	PSENEN (ENSOANG00000036325) #36	ENSOANG00000041703 #35	ENSOANG00000039234 #34	UPK1A (ENSOANG00000030164) #31	ENSOANG00000042663	APLP1 (ENSOANG00000044899)	ENSOANG00000002747
Sauria	ANCESTRAL SPECIES	45	ENSGT00940000164679	ENSGT00940000163727	ENSGT00940000153062.C	ENSGT00940000159793.e.a	ENSGT00940000153062.A.a	ENSGT00950000183155.a.a.a.a.b.c	ENSGT00940000165494	ENSGT00940000159269.g.a	ENSGT00940000159697	ENSGT00390000018560.a.b	ENSGT00940000161007	ENSGT01020000230346.D	ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01100000263571	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a #18	ENSGT00990000203527.a.b ##18	ENSGT00950000185724	ENSGT01100000263535.b.a.b ##14	ENSGT01100000263573.a.a.a	ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT00940000160467	ENSGT01080000257333.D.a
Archelosauria	ANCESTRAL SPECIES	62													ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01100000263571	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a #18	ENSGT00990000203527.a.b ##18	ENSGT00950000185724	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936	ENSGT01100000263551.b.b.a	ENSGT00950000183066.a.a.a	ENSGT01020000230438.B.a.b	ENSGT01020000230438.B.b.b.a.j	ENSGT00940000167735	ENSGT00940000160467
Cryptodira	ANCESTRAL SPECIES	98													ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01100000263571	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a #18	ENSGT00990000203527.a.b ##18	ENSGT00950000185724
Testudinoidea	ANCESTRAL SPECIES	45													ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01100000263571	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a.d.b #18	ENSGT00990000203527.a.b ##18	ENSGT00950000185724	ENSGT00940000160704.b #12	ENSGT00960000187889	ENSGT00950000185384	ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT00960000191734	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936	ENSGT00940000167735
Emydidae	ANCESTRAL SPECIES	119													ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01100000263571	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.b #17	ENSGT00990000203527.a.a.a.a.d.b #18	ENSGT00990000203527.a.b ##18	ENSGT00950000185724
painted turtle	MODERN SPECIES	1136													MAG (ENSCPBG00000022788) #14	ENSCPBG00000022795 #10	LSR (ENSCPBG00000022798) #11	GAPDHS (ENSCPBG00000022802) #22	TMEM147 (ENSCPBG00000022807) #23	ATP4A (ENSCPBG00000022825) #24	ENSCPBG00000023037 #18	ENSCPBG00000023038 #18	ENSCPBG00000023039 #18	ENSCPBG00000023041 ##18	ENSCPBG00000023042	ENSCPBG00000023043	ENSCPBG00000023045
Three-toed box turtle	MODERN SPECIES	238														ENSTMTG00000015790 #10	LSR (ENSTMTG00000015796) #11	GAPDHS (ENSTMTG00000015822) #22	TMEM147 (ENSTMTG00000015842) #23	ATP4A (ENSTMTG00000015861) #24	ENSTMTG00000015916	ENSTMTG00000015951 ##18	ENSTMTG00000015962 #18	ENSTMTG00000015982 ##18	ENSTMTG00000015989
Testudinidae	ANCESTRAL SPECIES	65	ENSGT01050000244971.C.c.a.a.a.b	ENSGT01020000230389.b.a.b.d.b.b.a.b.a	ENSGT01050000244971.C.c.a.a.b.a.b.a	ENSGT01020000230389.b.a.b.d.b.b.b.b	ENSGT01050000244971.C.c.a.b	ENSGT01030000234637.a.b.e	ENSGT01030000234669.L.a.a.b.b.a.b.b	ENSGT00950000183007.b.i.a.b	ENSGT00390000001041	ENSGT00940000164072	ENSGT00980000200662	ENSGT01100000263571	ENSGT00950000185089	ENSGT01100000263535.a.b #14	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a.d.b #18
Abingdon island giant tortoise	MODERN SPECIES	1880				ENSCABG00000023057	ENSCABG00000023056	ENSCABG00000023055	ENSCABG00000023054	CTU1 (ENSCABG00000023053)	ENSCABG00000023052	ENSCABG00000023051	ENSCABG00000023050	ENSCABG00000023049	ENSCABG00000023048	MAG (ENSCABG00000023047) #14	LSR (ENSCABG00000023046) #11	GAPDHS (ENSCABG00000023045) #22	TMEM147 (ENSCABG00000023044) #23	ATP4A (ENSCABG00000023043) #24	ENSCABG00000023042	ENSCABG00000023041 ##18	ENSCABG00000023040 #18	ENSCABG00000023039 #18	ENSCABG00000023038 #18	ENSCABG00000023037	ENSCABG00000023036
Goode s thornscrub tortoise	MODERN SPECIES	122	ENSGEVG00005020150	ENSGEVG00005020155	ENSGEVG00005020158	ENSGEVG00005020163	ENSGEVG00005020167	ENSGEVG00005020185	ENSGEVG00005020223	ENSGEVG00005020225	CTU1 (ENSGEVG00005012497)	ENSGEVG00005012514	TYROBP (ENSGEVG00005012543)	ENSGEVG00005012572	ENSGEVG00005012658	MAG (ENSGEVG00005012792) #14	LSR (ENSGEVG00005013475) #11	GAPDHS (ENSGEVG00005013607) #22	TMEM147 (ENSGEVG00005013656) #23	ATP4A (ENSGEVG00005013696) #24	ENSGEVG00005013999 ##18	ENSGEVG00005014017 #18	ENSGEVG00005014078 #18	USF2 (ENSGEVG00005014152) #12	ENSGEVG00005014179	ENSGEVG00005014221	ENSGEVG00005014256	LIM2 (ENSGEVG00005014284)	ENSGEVG00005014311	ENSGEVG00005014334	NKG7 (ENSGEVG00005014369)	ETFB (ENSGEVG00005014390)	ENSGEVG00005014427
Chinese turtle	MODERN SPECIES	26														ENSPSIG00000000118	ENSPSIG00000011305	GAPDHS (ENSPSIG00000011371) #22	MAG (ENSPSIG00000013827) #14	ENSPSIG00000008095 #10	LSR (ENSPSIG00000008189) #11	TMEM147 (ENSPSIG00000008309) #23	ATP4A (ENSPSIG00000008542) #24	ENSPSIG00000013747	ENSPSIG00000014811 ##18	ENSPSIG00000014881 #17
Archosauria	ANCESTRAL SPECIES	106													ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23
Aves	ANCESTRAL SPECIES	163																ENSGT00940000160272 #22	ENSGT00390000013276 #23
Neognathae	ANCESTRAL SPECIES	142																ENSGT00940000160272 #22	ENSGT00390000013276 #23
Galloanserae	ANCESTRAL SPECIES	133																ENSGT00940000160272 #22	ENSGT00390000013276 #23
Anatidae	ANCESTRAL SPECIES	227																ENSGT00940000160272 #22	ENSGT00940000160297.b #24
Pink-footed goose	MODERN SPECIES	630																GAPDHS (ENSABRG00000009972) #22	ENSABRG00000010113	ATP4A (ENSABRG00000010117) #24	ENSABRG00000010144	ENSABRG00000010159 #17	ENSABRG00000010162 #18
Duck	MODERN SPECIES	1548																ENSAPLG00000019651 #22
Phasianidae	ANCESTRAL SPECIES	104																ENSGT00940000160272 #22	ENSGT00390000013276 #23
Phasianidae_b	ANCESTRAL SPECIES	108																ENSGT00940000160272 #22	ENSGT00390000013276 #23
Chicken	MODERN SPECIES	91																ENSGALG00010000230 #22	ENSGALG00010000232 #23
Australian saltwater crocodile	MODERN SPECIES	60	CNPY3 (ENSCPRG00005008101)	PTCRA (ENSCPRG00005008097)	ENSCPRG00005008091	POLR1B (ENSCPRG00005008080)	TTL (ENSCPRG00005008072)	TAPBPL (ENSCPRG00005008048)	SCNN1A (ENSCPRG00005008027)	VAMP1 (ENSCPRG00005008021)	ENSCPRG00005008010	MRPL51 (ENSCPRG00005008007)	NCAPD2 (ENSCPRG00005007847)	ENSCPRG00005007828	ENSCPRG00005007821 #10	MAG (ENSCPRG00005007802) #14	LSR (ENSCPRG00005007774) #11	GAPDHS (ENSCPRG00005007750) #22	GAPDH (ENSCPRG00005007744)	IFFO1 (ENSCPRG00005007699)	NOP2 (ENSCPRG00005007691)	CHD4 (ENSCPRG00005006161)	LPAR5 (ENSCPRG00005005932)	ENSCPRG00005005863	ENSCPRG00005005847	ING4 (ENSCPRG00005005824)	ZNF384 (ENSCPRG00005005809)	PIANP (ENSCPRG00005005804)	COPS7A (ENSCPRG00005005800)	MLF2 (ENSCPRG00005005783)	ENSCPRG00005005775	ENSCPRG00005005769	ENSCPRG00005005677
Lepidosauria	ANCESTRAL SPECIES	51	ENSGT00950000183155.a.a.a.a.b.c	ENSGT00940000165494	ENSGT00940000159269.g.a	ENSGT00940000159697	ENSGT00390000018560.a.b	ENSGT00940000161007	ENSGT01020000230346.D	ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b	ENSGT00930000151055 #28	ENSGT00940000165943	ENSGT00940000166428	ENSGT00940000165447	ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01100000263571	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a #18	ENSGT00990000203527.a.b ##18	ENSGT00950000185724	ENSGT00940000160704.b #12	ENSGT01100000263535.b.a.b ##14	ENSGT01100000263573.a.a.a	ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT00940000160467
tuatara	MODERN SPECIES	1677					PSMC4 (ENSSPUG00000010815)	ENSSPUG00000010852	ENSSPUG00000010864	ENSSPUG00000010873	ENSSPUG00000010931	COX6B1 (ENSSPUG00000011065) #30	ENSSPUG00000011078	ENSSPUG00000011093	ENSSPUG00000011105	MAG (ENSSPUG00000011140) #14	LSR (ENSSPUG00000011185) #11	GAPDHS (ENSSPUG00000011218) #22	TMEM147 (ENSSPUG00000011332) #23	ATP4A (ENSSPUG00000011638) #24
Episquamata	ANCESTRAL SPECIES	7	ENSGT00960000192299	ENSGT00390000018560.a.b	ENSGT00940000161007	ENSGT01020000230346.D	ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b	ENSGT01020000230389.b.a.b.d.b.b.a.b.b	ENSGT00950000182788.a.b.b.b.o.a	ENSGT00940000156204.vb #30	ENSGT00930000151055 #28	ENSGT00940000165943	ENSGT00940000166428	ENSGT00940000165447	ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01040000244553	ENSGT00990000211122	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a.j #18	ENSGT00990000203527.a.a.a.a.i #18	ENSGT00990000203527.a.b ##18	ENSGT00950000185724	ENSGT00940000160704.b #12	ENSGT01100000263535.b.a.b ##14	ENSGT01100000263573.a.a.a	ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936
Toxicofera	ANCESTRAL SPECIES	34	ENSGT00940000159269.g.a	ENSGT00940000159697	ENSGT00390000018560.a.b	ENSGT00940000161007	ENSGT01020000230346.D	ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b	ENSGT01020000230389.b.a.b.d.b.b.a.b.b	ENSGT00950000182788.a.b.b.b.o.a	ENSGT00940000156204.vb #30	ENSGT00930000151055 #28	ENSGT00940000165943	ENSGT00940000166428	ENSGT00940000165447	ENSGT01100000263535.a.b #14	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01040000244553	ENSGT00990000211122	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a.j #18	ENSGT00990000203527.a.b ##18	ENSGT00950000185724	ENSGT00940000160704.b #12	ENSGT01100000263535.b.a.b ##14	ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT00940000172119	ENSGT00390000009936	ENSGT00940000167735	ENSGT00940000160467
Elapidae	ANCESTRAL SPECIES	9	ENSGT00950000183155.a.a.a.a.b.d	ENSGT00950000183155.a.b.a.a.b	ENSGT00940000159697	ENSGT00390000018560.a.b	ENSGT00940000161007.c	ENSGT01020000230346.D	ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b	ENSGT01020000230389.b.a.b.d.b.b.a.b.b.b	ENSGT00940000156204.vb #30	ENSGT00930000151055 #28	ENSGT00940000165943	ENSGT00940000166428	ENSGT00940000165447	ENSGT01100000263535.a.b #14	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01010000229722	ENSGT00990000211122	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a.j #18	ENSGT00990000203527.a.b ##18	ENSGT00940000160704.b #12	ENSGT01100000263535.b.a.b ##14	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT00940000160467	ENSGT01080000257333.D.a.b	ENSGT01080000257333.D.a.a.a.b
Indian cobra	MODERN SPECIES	11	ENSNNAG00000015132	HPN (ENSNNAG00000015149)	ENSNNAG00000015176	SCN1B (ENSNNAG00000015198)	GRAMD1A (ENSNNAG00000015207)	PSMC4 (ENSNNAG00000015276)	ENSNNAG00000015291	ENSNNAG00000015301	RBM42 (ENSNNAG00000015320) #28	ENSNNAG00000015396	ENSNNAG00000015416	ENSNNAG00000015457	ENSNNAG00000015481	MAG (ENSNNAG00000015511) #14	LSR (ENSNNAG00000015555) #11	GAPDHS (ENSNNAG00000015618) #22	TMEM147 (ENSNNAG00000015636) #23	ATP4A (ENSNNAG00000015711) #24	ENSNNAG00000016659	ENSNNAG00000016693	ENSNNAG00000016749	ENSNNAG00000016801	ENSNNAG00000016806	ENSNNAG00000016814 ##18	FFAR2 (ENSNNAG00000016819) #18	ENSNNAG00000016823 ##18	ENSNNAG00000016828 ##18	ENSNNAG00000016835 ##18	ENSNNAG00000016841	USF2 (ENSNNAG00000016848) #12	ENSNNAG00000016887 ##14
Elapidae_a	ANCESTRAL SPECIES	125	ENSGT00950000183155.a.b.a.a.b	ENSGT00960000192299	ENSGT00940000159697	ENSGT00390000018560.a.b	ENSGT00940000161007.c	ENSGT01020000230346.D	ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b	ENSGT01020000230389.b.a.b.d.b.b.a.b.b.b	ENSGT00940000156204.vb.a #30	ENSGT00930000151055 #28	ENSGT00940000165943	ENSGT00940000166428	ENSGT00940000165447	ENSGT01100000263535.a.b #14	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24
Acanthophiinae	ANCESTRAL SPECIES	71	ENSGT00950000183155.a.a.a.a.b.d	ENSGT00950000183155.a.b.a.a.b	ENSGT00940000159697	ENSGT00960000192299	ENSGT00390000018560.a.b	ENSGT00940000161007.c	ENSGT01020000230346.D	ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b	ENSGT01020000230389.b.a.b.d.b.b.a.b.b.b	ENSGT00940000156204.vb.a #30	ENSGT00930000151055 #28	ENSGT00940000165943	ENSGT00940000166428	ENSGT01100000263535.a.b #14	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00950000185089.b	ENSGT01030000238989	ENSGT00950000185089.a	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a.j #18	ENSGT00990000203527.a.b ##18	ENSGT00940000160704.b #12	ENSGT01100000263535.b.a.b ##14	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936	ENSGT00940000167735	ENSGT00940000160467	ENSGT01080000257333.D.a.b
Mainland tiger snake	MODERN SPECIES	247	ENSNSUG00000016338	ENSNSUG00000016337	ENSNSUG00000016335	SCN1B (ENSNSUG00000016334)	GRAMD1A (ENSNSUG00000016217)	ENSNSUG00000016216	ENSNSUG00000016215	ENSNSUG00000016120	COX6B1 (ENSNSUG00000016119) #30	RBM42 (ENSNSUG00000016118) #28	ENSNSUG00000016117	ENSNSUG00000016115	MAG (ENSNSUG00000016113) #14	ENSNSUG00000016112 #11	ENSNSUG00000016111 #11	GAPDHS (ENSNSUG00000016058) #22	TMEM147 (ENSNSUG00000016057) #23	ATP4A (ENSNSUG00000016056) #24
Eastern brown snake	MODERN SPECIES	115	ENSPTXG00000014767	ENSPTXG00000014768	HPN (ENSPTXG00000014769)	ENSPTXG00000014770	SCN1B (ENSPTXG00000014771)	GRAMD1A (ENSPTXG00000014772)	PSMC4 (ENSPTXG00000014773)	ENSPTXG00000014774	ENSPTXG00000014775	ENSPTXG00000014864 #30	RBM42 (ENSPTXG00000014865) #28	ENSPTXG00000014867	ENSPTXG00000014868	MAG (ENSPTXG00000014869) #14	LSR (ENSPTXG00000014871) #11	GAPDHS (ENSPTXG00000014872) #22	TMEM147 (ENSPTXG00000014875) #23	ATP4A (ENSPTXG00000014879) #24	ENSPTXG00000014884	ENSPTXG00000014885	ENSPTXG00000014887 ##18	ENSPTXG00000014889 #18	ENSPTXG00000014890 ##18	USF2 (ENSPTXG00000014893) #12	ENSPTXG00000014895 ##14	NKG7 (ENSPTXG00000014896)	ETFB (ENSPTXG00000014899)	ENSPTXG00000014903	IGLON5 (ENSPTXG00000014909)	ENSPTXG00000015023	ENSPTXG00000015024
Blue-lipped sea krait	MODERN SPECIES	6291												ENSLLTG00000010258	ENSLLTG00000010282	MAG (ENSLLTG00000010359) #14	LSR (ENSLLTG00000010441) #11	GAPDHS (ENSLLTG00000010538) #22	TMEM147 (ENSLLTG00000010595) #23	ATP4A (ENSLLTG00000010771) #24
Lizard	MODERN SPECIES	895													ENSACAG00000028379 #10	ENSACAG00000041884	ENSACAG00000010033 #11	GAPDHS (ENSACAG00000010085) #22	TMEM147 (ENSACAG00000037129) #23	ATP4A (ENSACAG00000010158) #24	ENSACAG00000045127	ENSACAG00000028984	ENSACAG00000027130	ENSACAG00000010285 ##18	ENSACAG00000010287 #18	ENSACAG00000040330 #18	ENSACAG00000010290 ##18	ENSACAG00000034561	ENSACAG00000010293 #12	ENSACAG00000024342 ##14	ENSACAG00000010377	ENSACAG00000010391	ENSACAG00000013937
Laterata	ANCESTRAL SPECIES	45	ENSGT00390000018560.a.b	ENSGT00940000161007	ENSGT01020000230346.D	ENSGT00940000154715.b.k.b.a.b.b.b.a.b.b	ENSGT00940000159113.a	ENSGT01020000230389.b.a.b.d.b.b.a.b.b.c	ENSGT00950000182788.a.b.b.b.o.a	ENSGT00940000156204.vb #30	ENSGT00930000151055 #28	ENSGT00940000165943	ENSGT00940000166428	ENSGT00940000165447	ENSGT01100000263535.a.b #14	ENSGT00530000063991.b #10	ENSGT00950000183058.B #11	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT01040000244553	ENSGT01030000238989	ENSGT00950000185089	ENSGT01100000263571.c	ENSGT00990000203527.b ##18	ENSGT00990000203527.a.a.a.a.j.d #18	ENSGT00940000160704.b #12	ENSGT01100000263535.b.a.b ##14	ENSGT01100000263573.a.a.a	ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT01050000244814.a.a.b.b.a.a	ENSGT00390000009936	ENSGT00940000167735
Argentine black and white tegu	MODERN SPECIES	123	HPN (ENSSMRG00000011634)	SCN1B (ENSSMRG00000011635)	GRAMD1A (ENSSMRG00000011643)	ENSSMRG00000011646	PSMC4 (ENSSMRG00000011647)	ENSSMRG00000011649	ENSSMRG00000011651	COX6B1 (ENSSMRG00000011653) #30	RBM42 (ENSSMRG00000011656) #28	ENSSMRG00000011658	ENSSMRG00000011665	ENSSMRG00000011668	LSR (ENSSMRG00000011672) #11	MAG (ENSSMRG00000011676) #14	ENSSMRG00000011678 #10	GAPDHS (ENSSMRG00000011679) #22	TMEM147 (ENSSMRG00000011680) #23	ATP4A (ENSSMRG00000011681) #24	ENSSMRG00000011686
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	16	GRAMD1A (ENSPMRG00000008143)	PSMC4 (ENSPMRG00000008125)	ENSPMRG00000008110	ENSPMRG00000008104	ENSPMRG00000008098	ENSPMRG00000008091	ENSPMRG00000008086	ENSPMRG00000008078 #30	RBM42 (ENSPMRG00000008072) #28	ENSPMRG00000008057	ENSPMRG00000008048	ENSPMRG00000008038	MAG (ENSPMRG00000008027) #14	LSR (ENSPMRG00000008005) #11	ENSPMRG00000007991	GAPDHS (ENSPMRG00000007984) #22	ENSPMRG00000007949 #22	TMEM147 (ENSPMRG00000007926) #23	ATP4A (ENSPMRG00000007838) #24	ENSPMRG00000007802	ENSPMRG00000007798	ENSPMRG00000007795	ENSPMRG00000007790	ENSPMRG00000007788	ENSPMRG00000007787 ##18	ENSPMRG00000007785 #18	ENSPMRG00000007783 #18	ENSPMRG00000007779 #18	ENSPMRG00000007776 #18	ENSPMRG00000007768 #18	ENSPMRG00000007756 ##18
Common wall lizard	MODERN SPECIES	16	PSMC4 (ENSPMRG00000008125)	ENSPMRG00000008110	ENSPMRG00000008104	ENSPMRG00000008098	ENSPMRG00000008091	ENSPMRG00000008086	ENSPMRG00000008078 #30	RBM42 (ENSPMRG00000008072) #28	ENSPMRG00000008057	ENSPMRG00000008048	ENSPMRG00000008038	MAG (ENSPMRG00000008027) #14	LSR (ENSPMRG00000008005) #11	ENSPMRG00000007991	GAPDHS (ENSPMRG00000007984) #22	ENSPMRG00000007949 #22	TMEM147 (ENSPMRG00000007926) #23	ATP4A (ENSPMRG00000007838) #24	ENSPMRG00000007802	ENSPMRG00000007798	ENSPMRG00000007795	ENSPMRG00000007790	ENSPMRG00000007788	ENSPMRG00000007787 ##18	ENSPMRG00000007785 #18	ENSPMRG00000007783 #18	ENSPMRG00000007779 #18	ENSPMRG00000007776 #18	ENSPMRG00000007768 #18	ENSPMRG00000007756 ##18	ENSPMRG00000007753 ##18
Coelacanth	MODERN SPECIES	2999																GAPDHS (ENSLACG00000004825) #22	TMEM147 (ENSLACG00000004245) #23	ATP4A (ENSLACG00000002884) #24
Actinopterygii	ANCESTRAL SPECIES	127	ENSGT00390000010337.A	ENSGT00950000182952.E	ENSGT00950000182904.a.a.b	ENSGT00940000166443	ENSGT00390000003568	ENSGT00950000183007.b	ENSGT00940000163304	ENSGT00950000183007.a.a.a.b	ENSGT00530000063252.b	ENSGT00940000155418.a.b.b	ENSGT00940000160603	ENSGT00940000159510	ENSGT00980000198998	ENSGT00940000153695.C	ENSGT00940000153062.C	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000160297 #24	ENSGT00940000166159
Neopterygii	ANCESTRAL SPECIES	93	ENSGT01100000263586	ENSGT00940000160603	ENSGT00940000159510	ENSGT00530000068431	ENSGT00950000183155.a.a.a.a.a	ENSGT00950000183155.a.b.b	ENSGT00950000183155.a.b.a.a.b	ENSGT00950000183155.a.a.a.a.b	ENSGT00940000156038.a.b	ENSGT00980000198998	ENSGT00990000205757	ENSGT00940000153695.C	ENSGT00940000153062.C	ENSGT00940000166706	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23
Osteoglossocephalai	ANCESTRAL SPECIES	4	ENSGT00940000155418.a.b.b	ENSGT00940000160603	ENSGT00940000159510	ENSGT00530000068431	ENSGT00950000183155.a.a.a.a.a.b	ENSGT00950000183155.a.b.b	ENSGT00950000183155.a.b.a.a.b.c.b	ENSGT00950000183155.a.a.a.a.b	ENSGT00940000156038.a.b	ENSGT00940000153062.C	ENSGT00940000153695.C	ENSGT00990000205757	ENSGT00980000198998	ENSGT00940000166706	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00950000183007.a.b.i	ENSGT00390000008744	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000165943	ENSGT00940000166384	ENSGT00940000164898	ENSGT00390000018560.a.a.b	ENSGT00940000161007	ENSGT00390000018560.a.a.a.a.a	ENSGT01020000230346.D
Clupeocephala	ANCESTRAL SPECIES		ENSGT00940000160603	ENSGT00940000159510	ENSGT00530000068431	ENSGT00950000183155.a.b.a.a.a	ENSGT00940000153062.C	ENSGT00940000153695.C	ENSGT00990000205757	ENSGT00980000198998	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000166706	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT01010000222294.c.a #15	ENSGT00940000172064	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT01030000234567.A.a.a.a.a.b.e.a
Otomorpha	ANCESTRAL SPECIES	188				ENSGT01060000248765	ENSGT00980000198681	ENSGT00940000153695.C	ENSGT00990000205757	ENSGT00980000198998	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000166706.a.b	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT01010000222294.c.a #15	ENSGT00940000172064	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT01030000234567.A.a.a.a.a.b.e.a
Otophysi	ANCESTRAL SPECIES	1	ENSGT00760000119652	ENSGT00940000159412	ENSGT00940000160567	ENSGT00940000154566	ENSGT00940000158438.n	ENSGT00950000183180.a.b	ENSGT00940000167370	ENSGT00390000002634.a.e	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000166706.a.b	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT01010000222294.c.a #15	ENSGT00940000172064	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00940000160768	ENSGT00390000011435	ENSGT00390000005711	ENSGT00940000155236
Characiphysae	ANCESTRAL SPECIES	37	ENSGT00760000119652	ENSGT00940000159412	ENSGT00940000160567	ENSGT00940000154566	ENSGT00940000158438.n	ENSGT00950000183180.a.b	ENSGT00940000167370	ENSGT00390000002634.a.e	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000166706.a.b	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT01070000253760.b.b.a.a.c.a.f	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00940000160768	ENSGT00390000011435	ENSGT00390000005711	ENSGT00940000155236	ENSGT00940000153269.b.b
Characiphysae_b	ANCESTRAL SPECIES	37	ENSGT00760000119652	ENSGT00940000159412	ENSGT00940000160567	ENSGT00940000154566	ENSGT00940000158438.n	ENSGT00950000183180.a.b	ENSGT00940000167370	ENSGT00390000002634.a.e	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000166706.a.b	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT01070000253760.b.b.a.a.c.a.f	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A.e	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00940000160768	ENSGT00390000011435	ENSGT00390000005711	ENSGT00940000155236	ENSGT00940000153269.b.b
Characoidei	ANCESTRAL SPECIES	34	ENSGT00730000111185.eb	ENSGT00760000119652	ENSGT00940000159412	ENSGT00940000160567	ENSGT00940000154566	ENSGT00940000158438.n	ENSGT00950000183180.a.b	ENSGT00940000167370	ENSGT00390000002634.a.e	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000166706.a.b	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT01070000253760.b.b.a.a.c.a.f	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A.e	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00940000160768	ENSGT00390000011435	ENSGT00390000005711	ENSGT00940000155236	ENSGT00940000153269.b.b
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	36	ntrk1 (ENSAMXG00000024617)	PAQR6 (ENSAMXG00000042779)	smg5 (ENSAMXG00000024616)	SYNGAP1 (ENSAMXG00000024615)	ENSAMXG00000024614	rgl2 (ENSAMXG00000024613)	dnase2 (ENSAMXG00000036815)	ENSAMXG00000024611 #15	hpn (ENSAMXG00000024609)	ENSAMXG00000039698	fxyd11 (ENSAMXG00000034406)	fxyd3 (ENSAMXG00000039460)	ENSAMXG00000030645	si:dkey-33i11.9 (ENSAMXG00000036276)	ATP4A (ENSAMXG00000016585) #24	gapdhs (ENSAMXG00000016577) #22	ENSAMXG00000037111	tmem147 (ENSAMXG00000016559) #23	ENSAMXG00000040895	ENSAMXG00000035731	ENSAMXG00000039916	rbm42 (ENSAMXG00000016545)	ENSAMXG00000016540	upk1a (ENSAMXG00000040255) #31	ENSAMXG00000035193	FAM83A (ENSAMXG00000016523)	zgc:101716 (ENSAMXG00000029066)	ENSAMXG00000030440	dcaf13 (ENSAMXG00000037008)	RIMS2 (ENSAMXG00000016468)	ENSAMXG00000034458
Mexicana tetra	MODERN SPECIES	371																gapdhs (ENSAMXG00000042387) #22	ENSAMXG00000041047	tmem147 (ENSAMXG00000043657) #23
Red-bellied piranha	MODERN SPECIES	144	rbm8a (ENSPNAG00000028502)	afp4 (ENSPNAG00000028495)	ntrk1 (ENSPNAG00000004793)	PAQR6 (ENSPNAG00000004347)	smg5 (ENSPNAG00000028363)	SYNGAP1 (ENSPNAG00000028272)	PHF1 (ENSPNAG00000028196)	rgl2 (ENSPNAG00000005615)	dnase2 (ENSPNAG00000028105)	ENSPNAG00000028077	hpn (ENSPNAG00000028068)	fxyd11 (ENSPNAG00000028057)	fxyd3 (ENSPNAG00000028040)	si:ch73-343g19.4 (ENSPNAG00000004295)	ATP4A (ENSPNAG00000028017) #24	gapdhs (ENSPNAG00000004790) #22	ENSPNAG00000004263	tmem147 (ENSPNAG00000027781) #23	sult2st3 (ENSPNAG00000027735)	ENSPNAG00000027710	ENSPNAG00000027549	cd22 (ENSPNAG00000026367) #15
Electric eel	MODERN SPECIES	48	zgc:101569 (ENSEEEG00000020061)	ntrk1 (ENSEEEG00000020058)	PAQR6 (ENSEEEG00000020054)	smg5 (ENSEEEG00000020049)	SYNGAP1 (ENSEEEG00000020038)	PHF1 (ENSEEEG00000020035)	rgl2 (ENSEEEG00000020033)	dnase2 (ENSEEEG00000020032)	ENSEEEG00000020031 #15	ENSEEEG00000020030	hpn (ENSEEEG00000020029)	fxyd11 (ENSEEEG00000020027)	fxyd3 (ENSEEEG00000020025)	ENSEEEG00000020024	ATP4A (ENSEEEG00000020022) #24	gapdhs (ENSEEEG00000019984) #22
Channel catfish	MODERN SPECIES	15	AFP4 (ENSIPUG00000006556)	ntrk1 (ENSIPUG00000006577)	paqr6 (ENSIPUG00000006591)	Smg5 (ENSIPUG00000006624)	SYNGAP1 (ENSIPUG00000006816)	PHF1 (ENSIPUG00000006848)	rgl2 (ENSIPUG00000006874)	dnase2 (ENSIPUG00000006929)	ENSIPUG00000006948 #15	ENSIPUG00000006969	hpn (ENSIPUG00000006980)	fxyd11 (ENSIPUG00000007048)	FXYD3 (ENSIPUG00000007064)	si:dkey-33i11.9 (ENSIPUG00000007084)	atp4a (ENSIPUG00000007106) #24	gapdhs (ENSIPUG00000007211) #22	ENSIPUG00000007270	ENSIPUG00000007309	PLEKHG4B (ENSIPUG00000007343)	si:ch211-269k10.5 (ENSIPUG00000007505)	ptdss1a (ENSIPUG00000007519)	ENSIPUG00000007578	KIF13A (ENSIPUG00000007593)	grinab (ENSIPUG00000007663)	Smpd3 (ENSIPUG00000007675)	gpatch3 (ENSIPUG00000007697)	sacm1lb (ENSIPUG00000007741)	elp6 (ENSIPUG00000007818)	SCAP (ENSIPUG00000007873)	ENSIPUG00000007975	ptpn23a (ENSIPUG00000007992)
Cyprinoidei	ANCESTRAL SPECIES	25	ENSGT00940000159172	ENSGT00730000111185.eb	ENSGT00760000119652	ENSGT00940000159412	ENSGT00940000160567.r	ENSGT00940000154566	ENSGT00940000158438.n	ENSGT00950000183180.a.b	ENSGT00940000167370	ENSGT00390000002634.a.e	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583.d	ENSGT00940000166706.a.b	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT01010000222294.c.a #15	ENSGT00940000157687.a	ENSGT00940000158130.i	ENSGT01030000234856	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00940000160768	ENSGT00390000011435	ENSGT00390000005711	ENSGT00940000155236
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	84	ENSGT00940000160567.q	ENSGT00940000154566.a	ENSGT00940000158438.n.a	ENSGT00950000183180.a.b.g.b	ENSGT00940000167370.d	ENSGT00390000002634.a.e	ENSGT01010000222294.c.b.b.a.a.b.a.b.a #15	ENSGT00940000159697.i.a	ENSGT01100000263583.c	ENSGT00940000166706.a.a.b	ENSGT01010000222294.c.b.b.a.a.b.a.b.b #15	ENSGT00940000159697.i.b	ENSGT01070000253873	ENSGT01100000263583.d	ENSGT00940000166706.a.b	ENSGT00940000160272.c #22	ENSGT00390000013276.d #23	ENSGT00940000166159.x	ENSGT00940000166537.b	ENSGT01010000222294.c.a.ib.a.b #15	ENSGT00940000164813.e.b	ENSGT00940000165396.A.b.a	ENSGT00940000165396.A.a.e.b	ENSGT00940000160881.c #31	ENSGT00940000160768.h	ENSGT00390000011435.m	ENSGT00390000005711.d	ENSGT00940000155236.j.a.b	ENSGT00940000153269.b.b.c	ENSGT01030000234527.A.a.a.a
Goldfish	MODERN SPECIES	35	mtmr11 (ENSCARG00000050674)	otud7b (ENSCARG00000050632)	rbm8a (ENSCARG00000050575)	ENSCARG00000050558	ENSCARG00000050539	ntrk1 (ENSCARG00000050467)	PAQR6 (ENSCARG00000050439)	smg5 (ENSCARG00000050312)	SYNGAP1 (ENSCARG00000050108)	PHF1 (ENSCARG00000049711)	rgl2 (ENSCARG00000049643)	ENSCARG00000049595 #15	hpn (ENSCARG00000049421)	fxyd3 (ENSCARG00000049352)	si:ch73-343g19.4 (ENSCARG00000049345)	gapdhs (ENSCARG00000048651) #22	tmem147 (ENSCARG00000048569) #23	sult2st3 (ENSCARG00000048552)	ENSCARG00000048537	cd22 (ENSCARG00000048526) #15	rbm42 (ENSCARG00000048498)	ENSCARG00000048463	upk1a (ENSCARG00000048441) #31	ENSCARG00000048430	FAM83A (ENSCARG00000048417)	zgc:101716 (ENSCARG00000048353)	dcaf13 (ENSCARG00000048213)	RIMS2 (ENSCARG00000046521)	dpys (ENSCARG00000046273)	ccdc127a (ENSCARG00000046253)	ENSCARG00000046202
Cyprininae_a	ANCESTRAL SPECIES	78	ENSGT00950000182940.b.a.b.a.a.b	ENSGT00940000160276.e	ENSGT00940000159172.c	ENSGT00730000111185.eb.a	ENSGT00760000119652.h.b	ENSGT00940000159412.a	ENSGT00940000160567.q	ENSGT00940000154566.a	ENSGT00940000158438.n.a	ENSGT00950000183180.a.b.g.b	ENSGT00940000167370.d	ENSGT01010000222294.c.b.b.a.a.b.a.b.b #15	ENSGT00940000159697.i.b	ENSGT01070000253873	ENSGT01100000263583.d	ENSGT00940000160272.c #22	ENSGT00390000013276.d #23	ENSGT00940000166159.x	ENSGT00940000166537.b	ENSGT01010000222294.c.a.ib.a.b #15	ENSGT00940000164813.f	ENSGT00940000165396.A.a.f	ENSGT00940000160881.c #31	ENSGT00940000160768.h	ENSGT00390000011435.m	ENSGT00390000005711.d	ENSGT00940000155236.j.a.b	ENSGT00940000153269.b.b.c	ENSGT01030000234527.A.a.a.a.c	ENSGT00530000063823.b.b.a.m	ENSGT00390000008074.b
Common carp reference	MODERN SPECIES	2	SV2A (ENSCCRG00000003867)	mtmr11 (ENSCCRG00000005000)	otud7b (ENSCCRG00000062979)	rbm8a (ENSCCRG00000068126)	ENSCCRG00000063671	ntrk1 (ENSCCRG00000003301)	ENSCCRG00000003270	smg5 (ENSCCRG00000002969)	ENSCCRG00000031543	ENSCCRG00000042672	rgl2 (ENSCCRG00000042662)	ENSCCRG00000042654 #15	hpn (ENSCCRG00000042594)	fxyd3 (ENSCCRG00000064664)	ENSCCRG00000077158	gapdhs (ENSCCRG00000062099) #22	tmem147 (ENSCCRG00000057551) #23	sult2st3 (ENSCCRG00000055389)	ENSCCRG00000081638	cd22 (ENSCCRG00000041821) #15	ENSCCRG00000076960	upk1a (ENSCCRG00000033842) #31	ENSCCRG00000066302	zgc:101716 (ENSCCRG00000046608)	dcaf13 (ENSCCRG00000046600)	ENSCCRG00000033866	DCSTAMP (ENSCCRG00000033882)	dpys (ENSCCRG00000054661)	zfpm2a (ENSCCRG00000032136)	ENSCCRG00000060104	ENSCCRG00000064321
Golden-line barbel	MODERN SPECIES	584																gapdhs (ENSSGRG00000052627) #22	tmem147 (ENSSGRG00000052584) #23	sult2st3 (ENSSGRG00000052583)	ENSSGRG00000052582	rbm42 (ENSSGRG00000052581)	ENSSGRG00000052580	upk1a (ENSSGRG00000052578) #31	ENSSGRG00000052577	zgc:101716 (ENSSGRG00000052576)	dcaf13 (ENSSGRG00000052574)	RIMS2 (ENSSGRG00000052572)	DCSTAMP (ENSSGRG00000052570)	dpys (ENSSGRG00000052569)	zfpm2a (ENSSGRG00000052568)	ENSSGRG00000052567	OXR1 (ENSSGRG00000052566)
Cyprininae	ANCESTRAL SPECIES	83	ENSGT00940000165753.f	ENSGT00510000048165	ENSGT00950000182940.b.a.b.a.a.a	ENSGT00650000094861	ENSGT00940000160276.f	ENSGT00940000159172.d	ENSGT00730000111185.eb.b	ENSGT00760000119652.g	ENSGT00760000119652.h.a	ENSGT00940000159412.b	ENSGT00940000160567.r	ENSGT00940000154566.b	ENSGT00940000158438.n.b	ENSGT00950000183180.a.b.g.a	ENSGT00940000167370.c	ENSGT00940000160272.d #22	ENSGT00390000013276.c #23	ENSGT00940000166159.w	ENSGT00940000166537.a	ENSGT01010000222294.c.a.ib.a.a #15	ENSGT00940000164813.e.a	ENSGT00940000165396.A.a.e.a	ENSGT00940000160881.d #31	ENSGT00940000165579.a.a.b	ENSGT00940000160768.g	ENSGT00390000011435.n	ENSGT00390000005711.c	ENSGT00940000155236.j.a.a	ENSGT00940000153269.b.b.d	ENSGT00530000063823.b.b.a.n	ENSGT00390000008074.a
Cyprininae_a	ANCESTRAL SPECIES	117	ENSGT00730000111185.eb.b	ENSGT00760000119652.g	ENSGT00760000119652.h.a	ENSGT00940000159412.b	ENSGT00940000160567.r	ENSGT00940000154566.b	ENSGT00940000158438.n.b	ENSGT00950000183180.a.b.g.a	ENSGT00940000167370.c	ENSGT00390000002634.a.e	ENSGT01010000222294.c.b.b.a.a.b.a.b.a #15	ENSGT00940000159697.i.a	ENSGT01100000263583.c	ENSGT00940000166706.a.a.b	ENSGT00940000166706.a.b	ENSGT00940000160272.d #22	ENSGT00390000013276.c #23	ENSGT00940000166159.w	ENSGT00940000166537.a	ENSGT01010000222294.c.a.ib.a.a #15	ENSGT00940000164813.e.a	ENSGT00940000165396.A.b.a	ENSGT00940000160881.d #31	ENSGT00940000165579.a.a.b	ENSGT00940000160768.g	ENSGT00390000011435.n	ENSGT00390000005711.c	ENSGT00940000155236.j.a.a	ENSGT00940000153269.b.b.d	ENSGT01030000234527.A.a.a.a.d	ENSGT00530000063823.b.b.a.n
Golden-line barbel	MODERN SPECIES	3331																gapdhs (ENSSGRG00000006771) #22
Common carp reference	MODERN SPECIES	47	rbm8a (ENSCCRG00000022276)	ENSCCRG00000070372	ENSCCRG00000081920	ntrk1 (ENSCCRG00000022331)	ENSCCRG00000022429	smg5 (ENSCCRG00000022463)	ENSCCRG00000031280	ENSCCRG00000000629	rgl2 (ENSCCRG00000000581)	ENSCCRG00000017383 #15	dnase2 (ENSCCRG00000064362)	hpn (ENSCCRG00000074830)	ENSCCRG00000063583	ENSCCRG00000012111	si:ch73-343g19.4 (ENSCCRG00000076519)	gapdhs (ENSCCRG00000068560) #22	tmem147 (ENSCCRG00000031098) #23	sult2st3 (ENSCCRG00000031110)	ENSCCRG00000033828	cd22 (ENSCCRG00000005294) #15	rbm42 (ENSCCRG00000066030)	ENSCCRG00000041824	ENSCCRG00000070495	ENSCCRG00000036360	upk1a (ENSCCRG00000005472) #31	ENSCCRG00000075730	ENSCCRG00000061220	zgc:101716 (ENSCCRG00000063497)	dcaf13 (ENSCCRG00000059622)	ENSCCRG00000066150	DCSTAMP (ENSCCRG00000033874)
Goldfish	MODERN SPECIES	7	rbm8a (ENSCARG00000002532)	ENSCARG00000002545	ENSCARG00000002551	ntrk1 (ENSCARG00000002564)	PAQR6 (ENSCARG00000002585)	smg5 (ENSCARG00000002607)	SYNGAP1 (ENSCARG00000002740)	ENSCARG00000002787	dnase2 (ENSCARG00000002800)	rgl2 (ENSCARG00000002822)	ENSCARG00000002877	hpn (ENSCARG00000002889)	fxyd11 (ENSCARG00000002913)	ENSCARG00000002921	ENSCARG00000002930	gapdhs (ENSCARG00000002950) #22	tmem147 (ENSCARG00000002992) #23	sult2st3 (ENSCARG00000003013)	rspo1 (ENSCARG00000003021)	MAN1C1 (ENSCARG00000003038)	ENSCARG00000003102	ifnlr1 (ENSCARG00000003109)	fabp10a (ENSCARG00000003118)	SRSF10 (ENSCARG00000003126)	ubr5 (ENSCARG00000003158)	azin1a (ENSCARG00000003261)	atp6v1c1a (ENSCARG00000003293)	ENSCARG00000003322	cep72 (ENSCARG00000003344)	TPPP (ENSCARG00000003358)	ENSCARG00000003365
Zebrafish	MODERN SPECIES	7	ntrk1 (ENSDARG00000004586)	PAQR6 (ENSDARG00000041483)	smg5 (ENSDARG00000041481)	ENSDARG00000069765	PHF1 (ENSDARG00000057439)	rgl2 (ENSDARG00000007727)	dnase2 (ENSDARG00000073893)	ENSDARG00000053027 #15	hpn (ENSDARG00000027609)	fxyd11 (ENSDARG00000099117)	fxyd3 (ENSDARG00000099014)	si:dkey-33i11.9 (ENSDARG00000102555)	si:ch73-343g19.4 (ENSDARG00000104398)	ENSDARG00000097746	ENSDARG00000097752	gapdhs (ENSDARG00000039914) #22	tmem147 (ENSDARG00000039913) #23	sult2st3 (ENSDARG00000028367)	ENSDARG00000089586	cd22 (ENSDARG00000053005) #15	rbm42 (ENSDARG00000039910)	ENSDARG00000011333	upk1a (ENSDARG00000021866) #31	ENSDARG00000089112	ENSDARG00000097563	zgc:101716 (ENSDARG00000010738)	dcaf13 (ENSDARG00000002267)	RIMS2 (ENSDARG00000113702)	ENSDARG00000101606	dpys (ENSDARG00000079543)	zfpm2a (ENSDARG00000040123)
Clupeiformes	ANCESTRAL SPECIES	117	ENSGT00390000011362	ENSGT00940000156658	ENSGT00940000156032.`b.a	ENSGT00390000008932.m	ENSGT00390000008932.n	ENSGT01030000235686	ENSGT00940000153695.C	ENSGT00990000207652	ENSGT00980000198998	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000166706.a.b	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00950000183155.a.b.a.b	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT01030000234567.A.a.a.a.a.b.e.b	ENSGT00940000165943	ENSGT00940000166384	ENSGT00940000164898
Atlantic herring	MODERN SPECIES	2	ZFAT (ENSCHAG00000008020)	dync1i1 (ENSCHAG00000008225)	ENSCHAG00000012309	pon1 (ENSCHAG00000012391)	ENSCHAG00000012429	ENSCHAG00000012486	ENSCHAG00000012505	ENSCHAG00000012546	ENSCHAG00000012565	ENSCHAG00000012577	hpn (ENSCHAG00000012610)	ENSCHAG00000012753	fxyd3 (ENSCHAG00000012788)	si:ch73-343g19.4 (ENSCHAG00000012813)	ATP4A (ENSCHAG00000012847) #24	gapdhs (ENSCHAG00000013141) #22	tmem147 (ENSCHAG00000015114) #23	sult2st3 (ENSCHAG00000015156)	sult2st3 (ENSCHAG00000015175)	ENSCHAG00000015237	ENSCHAG00000015285	ENSCHAG00000015350	FCGBP (ENSCHAG00000015378)	rbm42 (ENSCHAG00000015565)	ENSCHAG00000015594	ENSCHAG00000015625	upk1a (ENSCHAG00000015638) #31	ENSCHAG00000015716	ppox (ENSCHAG00000015727)	kcnj21 (ENSCHAG00000015796)	fbl (ENSCHAG00000015849)
Denticle herring	MODERN SPECIES	15	rbfa (ENSDCDG00000018216)	ZFAT (ENSDCDG00000018217)	dync1i1 (ENSDCDG00000018304)	PON1 (ENSDCDG00000021195)	ENSDCDG00000021214	ENSDCDG00000021221	ENSDCDG00000021225	ENSDCDG00000021231	ENSDCDG00000021237	ENSDCDG00000021240	ENSDCDG00000021245 #15	hpn (ENSDCDG00000021255)	fxyd11 (ENSDCDG00000021260)	fxyd3 (ENSDCDG00000021262)	ATP4A (ENSDCDG00000021268) #24	gapdhs (ENSDCDG00000021381) #22	tmem147 (ENSDCDG00000021425) #23	sult2st3 (ENSDCDG00000021430)	sult2st3 (ENSDCDG00000021434)	ENSDCDG00000021448	ENSDCDG00000021451	rbm42 (ENSDCDG00000021454)	ENSDCDG00000021457	upk1a (ENSDCDG00000021462) #31	ENSDCDG00000021463	ppox (ENSDCDG00000021467)	kcnj21 (ENSDCDG00000021468)	fbl (ENSDCDG00000021469)	dyrk1b (ENSDCDG00000021472)	ENSDCDG00000021477	fli1rs (ENSDCDG00000021480)
Euteleosteomorpha	ANCESTRAL SPECIES	4	ENSGT00940000160603	ENSGT00940000159510	ENSGT00940000180166	ENSGT00980000198720	ENSGT00940000153695.C	ENSGT00990000205757	ENSGT00980000198998	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000178336	ENSGT00920000149572	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000166706	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000166060
Protacanthopterygii	ANCESTRAL SPECIES	1	ENSGT00940000161100	ENSGT00390000016319 #36	ENSGT00940000163756.c.b	ENSGT00390000005702 #34	ENSGT00940000154616.b	ENSGT00530000063252.b	ENSGT00940000155418.a.b.b	ENSGT00940000160603	ENSGT00940000159510	ENSGT00530000068431	ENSGT00980000198720	ENSGT00940000153695.C	ENSGT00990000205757.b	ENSGT00940000166706	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000154313.c.a	ENSGT00940000165396.A.b	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT01030000234567.A.a.a.a.a.b.e.a
Salmoninae	ANCESTRAL SPECIES	98										ENSGT00990000206251.b	ENSGT01070000253873	ENSGT00940000159697.b	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT01010000222294.c.b.b.a.a.b.a.a.d #15	ENSGT00940000160297.c #24	ENSGT00940000160272 #22	ENSGT00390000013276.e #23	ENSGT00940000166159	ENSGT00980000202943.A	ENSGT00940000166537.d	ENSGT00950000183155.a.b.a.b.c.b	ENSGT00390000013276.f #23	ENSGT00980000202943.B	ENSGT00940000166537.c	ENSGT01010000222294.c.a.c #15	ENSGT00950000183155.a.b.a.b.c.a.a.a	ENSGT00940000154641.A.g	ENSGT00940000164813.b	ENSGT00940000165396.A.a.g	ENSGT00940000165396.A.b	ENSGT00940000154313.c.a.k
Salmoninae_a	DUPLICATION
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	61	ENSGT00940000155418.a.b.b.c.b	ENSGT00940000160603.c	ENSGT00940000159510.c	ENSGT00940000159005.c.a.a.e.a.b.a	ENSGT01060000248765.b	ENSGT00980000198681.b	ENSGT00940000153695.C.d	ENSGT00990000205757.b.a	ENSGT00980000198998.b	ENSGT01010000222294.c.b.b.a.a.b.a.a.c.b #15	ENSGT00940000174784.a.b.b.b	ENSGT00940000159697.b.b	ENSGT01070000253873	ENSGT00990000206251.b.b.b	ENSGT00940000160297.d.b #24	ENSGT00940000160272.e.a #22	ENSGT00390000013276.f #23	ENSGT00980000202943.B	ENSGT00940000166537.c	ENSGT01010000222294.c.a.c #15	ENSGT00950000183155.a.b.a.b.d.b	ENSGT00940000154641.A.g	ENSGT00940000164813.b	ENSGT00940000165396.A.a.g	ENSGT00940000154313.c.a.k	ENSGT00940000165396.A.a.h.b	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744.c	ENSGT01080000257365.b.a.b.a.a.d.a.a	ENSGT00550000074792.b.g
Salmo	ANCESTRAL SPECIES	66	ENSGT00940000155418.a.b.b.c.a	ENSGT00940000160603.d	ENSGT00940000159510.c	ENSGT00940000159005.c.a.a.e.a.b.a	ENSGT01060000248765.b	ENSGT00980000198681.b	ENSGT00940000153695.C.d	ENSGT00990000205757.b.a	ENSGT00980000198998.b	ENSGT01010000222294.c.b.b.a.a.b.a.a.c.b #15	ENSGT00940000174784.a.b.b.b	ENSGT00940000159697.b.b	ENSGT01070000253873	ENSGT00990000206251.b.b.b	ENSGT00940000160297.d.b #24	ENSGT00940000160272.e.a #22	ENSGT00390000013276.f #23	ENSGT00980000202943.B	ENSGT00940000166537.c	ENSGT01010000222294.c.a.c #15	ENSGT00950000183155.a.b.a.b.d.b	ENSGT00940000154641.A.g	ENSGT00950000183155.a.b.a.b.c.a.b	ENSGT00940000154641.A.h.b	ENSGT00940000164813.b	ENSGT00940000165396.A.a.g	ENSGT00940000160881.i #31	ENSGT00390000008744.d	ENSGT01080000257365.b.a.b.a.a.c.a	ENSGT00550000074792.b.h	ENSGT00940000160345.c
Atlantic salmon	MODERN SPECIES	24	ENSSSAG00000119323	kirrel3l (ENSSSAG00000025297)	ENSSSAG00000093429	nphs1 (ENSSSAG00000056610)	ENSSSAG00000056570	ENSSSAG00000085045	ENSSSAG00000056550	ENSSSAG00000056542	ENSSSAG00000056532	ENSSSAG00000105945	ENSSSAG00000056520 #15	hpn (ENSSSAG00000056501)	ENSSSAG00000056493	ENSSSAG00000056484	ENSSSAG00000039944 #24	gapdhs (ENSSSAG00000053928) #22	tmem147 (ENSSSAG00000053878) #23	ENSSSAG00000086214	ENSSSAG00000045043	cd22 (ENSSSAG00000053845) #15	ENSSSAG00000053823	ENSSSAG00000099856	ENSSSAG00000112549	ENSSSAG00000101833	ENSSSAG00000053779	rbm42 (ENSSSAG00000053771)	ENSSSAG00000053725	ENSSSAG00000118311	upk1a (ENSSSAG00000091598) #31	ppox (ENSSSAG00000053680)	kcnj21 (ENSSSAG00000053670)
River trout	MODERN SPECIES	22	kirrel3l (ENSSTUG00000009246)	nphs1 (ENSSTUG00000009168)	ENSSTUG00000009151	ENSSTUG00000009143	ENSSTUG00000009115	ENSSTUG00000009102	ENSSTUG00000009087	ENSSTUG00000009065	ENSSTUG00000009056	ENSSTUG00000009037 #15	ENSSTUG00000009024	hpn (ENSSTUG00000008940)	fxyd11 (ENSSTUG00000008919)	ENSSTUG00000008906	ATP4A (ENSSTUG00000008706) #24	gapdhs (ENSSTUG00000008472) #22	tmem147 (ENSSTUG00000008455) #23	ENSSTUG00000008444	ENSSTUG00000008414	ENSSTUG00000008401	cd22 (ENSSTUG00000008354) #15	ENSSTUG00000008292	ENSSTUG00000008282	ENSSTUG00000008275	rbm42 (ENSSTUG00000008269)	ENSSTUG00000008259	ENSSTUG00000008250	upk1a (ENSSTUG00000008242) #31	ppox (ENSSTUG00000008186)	kcnj21 (ENSSTUG00000008166)	fbl (ENSSTUG00000008149)
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00530000063252.b.a	ENSGT00940000155418.a.b.b.c.a	ENSGT00940000160603.c	ENSGT00940000159510.c	ENSGT00940000159005.c.a.a.e.a.b.a	ENSGT01060000248765.b	ENSGT00980000198681.b	ENSGT00940000153695.C.d	ENSGT00990000205757.b.a	ENSGT01010000222294.c.b.b.a.a.b.a.a.c.b #15	ENSGT00940000174784.a.b.b.b	ENSGT00940000159697.b.b	ENSGT01070000253873	ENSGT00990000206251.b.a	ENSGT00940000160297.d.a.a #24	ENSGT00940000160272.e.a #22	ENSGT00390000013276.f #23	ENSGT00980000202943.B	ENSGT00940000166537.c	ENSGT01010000222294.c.a.c #15	ENSGT00950000183155.a.b.a.b.d.b	ENSGT00940000154641.A.g	ENSGT00940000164813.b	ENSGT00940000165396.A.a.h.a.b	ENSGT00940000154313.c.a.k	ENSGT00940000165396.A.a.h.b	ENSGT00940000160881.g #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744.c	ENSGT01080000257365.b.a.b.a.a.d.a.a	ENSGT00550000074792.b.g
Oncorhynchus_a	ANCESTRAL SPECIES	26	ENSGT00390000005702.d #34	ENSGT00940000154616.b.`b	ENSGT00530000063252.b.a	ENSGT00940000155418.a.b.b.c.a	ENSGT00940000160603.c	ENSGT00940000159510.c	ENSGT00940000159005.c.a.a.e.a.b.a	ENSGT01060000248765.b	ENSGT00980000198681.b	ENSGT00940000153695.C.d	ENSGT00990000205757.b.a	ENSGT01010000222294.c.b.b.a.a.b.a.a.c.b #15	ENSGT00940000174784.a.b.b.b	ENSGT00940000159697.b.b	ENSGT00940000160297.d.a.a #24	ENSGT00940000160272.e.a #22	ENSGT00390000013276.f #23	ENSGT00980000202943.B	ENSGT00940000166537.c	ENSGT01010000222294.c.a.c #15	ENSGT00950000183155.a.b.a.b.c.a.a.a	ENSGT00940000154641.A.h.a	ENSGT00990000210044.D	ENSGT00950000183155.a.b.a.b.d.b	ENSGT00940000154641.A.g	ENSGT00940000164813.b	ENSGT00940000154313.c.a.k.d	ENSGT00940000165396.A.b	ENSGT00940000160881.h #31	ENSGT00390000008744.d	ENSGT01080000257365.b.a.b.a.a.d.a.b
Coho salmon	MODERN SPECIES	4	APLP1 (ENSOKIG00005013346)	ENSOKIG00005013104	kirrel3l (ENSOKIG00005012942)	nphs1 (ENSOKIG00005012821)	ENSOKIG00005012791	ENSOKIG00005024916	ENSOKIG00005024912	ENSOKIG00005024900	ENSOKIG00005024885	ENSOKIG00005024873 #15	ENSOKIG00005024866	hpn (ENSOKIG00005024811)	ENSOKIG00005024795	ENSOKIG00005024775	ATP4A (ENSOKIG00005024243) #24	gapdhs (ENSOKIG00005023446) #22	tmem147 (ENSOKIG00005023402) #23	ENSOKIG00005023389	ENSOKIG00005023379	ENSOKIG00005023376	cd22 (ENSOKIG00005023363) #15	ENSOKIG00005023319	ENSOKIG00005023307	ENSOKIG00005023189	ENSOKIG00005023155	rbm42 (ENSOKIG00005023142)	ENSOKIG00005023135	ENSOKIG00005023125	upk1a (ENSOKIG00005023114) #31	ppox (ENSOKIG00005023040)	kcnj21 (ENSOKIG00005023021)
Chinook salmon	MODERN SPECIES	2906								nphs1 (ENSOTSG00005039447)	ENSOTSG00005039442	ENSOTSG00005039438	ENSOTSG00005045269	ENSOTSG00005045266	ENSOTSG00005045265 #15	hpn (ENSOTSG00005045264)	ENSOTSG00005045262	gapdhs (ENSOTSG00005045181) #22	tmem147 (ENSOTSG00005045180) #23	ENSOTSG00005045179	cd22 (ENSOTSG00005045177) #15	ENSOTSG00005045176	ENSOTSG00005045175	ENSOTSG00005045174	ENSOTSG00005045172	rbm42 (ENSOTSG00005045170)	ENSOTSG00005045169	ENSOTSG00005045168	upk1a (ENSOTSG00005045166) #31	ppox (ENSOTSG00005045165)	kcnj21 (ENSOTSG00005045164)	fbl (ENSOTSG00005045162)	dyrk1b (ENSOTSG00005045159)
Rainbow trout	MODERN SPECIES	11	nphs1 (ENSOMYG00000026133)	ENSOMYG00000026197	ENSOMYG00000052663	ENSOMYG00000065028	ENSOMYG00000074007	ENSOMYG00000026238	ENSOMYG00000026258	ENSOMYG00000050565	ENSOMYG00000071535	ENSOMYG00000026287 #15	hpn (ENSOMYG00000026318)	fxyd11 (ENSOMYG00000026343)	ENSOMYG00000026372	ENSOMYG00000077233	ENSOMYG00000026435 #24	gapdhs (ENSOMYG00000026699) #22	tmem147 (ENSOMYG00000026834) #23	ENSOMYG00000026865	ENSOMYG00000026912	ENSOMYG00000026952	ENSOMYG00000073112	cd22 (ENSOMYG00000026989) #15	ENSOMYG00000027029	ENSOMYG00000053745	ENSOMYG00000027126	rbm42 (ENSOMYG00000027148)	ENSOMYG00000027187	upk1a (ENSOMYG00000027230) #31	ppox (ENSOMYG00000027271)	kcnj21 (ENSOMYG00000027354)	fbl (ENSOMYG00000027365)
Salmoninae_a	ANCESTRAL SPECIES	160							ENSGT00990000206251.b.b.a	ENSGT01100000264170	ENSGT00940000159697.b.a	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT01010000222294.c.b.b.a.a.b.a.a.c.a #15	ENSGT00920000149572	ENSGT00940000178336	ENSGT00940000160297.c #24	ENSGT00940000160272.f #22	ENSGT00940000160272.e.b #22	ENSGT00390000013276.e #23	ENSGT00940000166159	ENSGT00980000202943.A	ENSGT00940000166537.d	ENSGT00950000183155.a.b.a.b.c.a.b	ENSGT00940000154641.A.h.b	ENSGT00940000164813.a	ENSGT00940000165396.A.a.h.a
Oncorhynchus	ANCESTRAL SPECIES	53	ENSGT00940000159510.d	ENSGT00940000159005.c.a.a.e.a.b.b	ENSGT01060000248765.a	ENSGT00980000198681.a	ENSGT00940000153695.C.c	ENSGT00990000205757.a	ENSGT00980000198998.a	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00990000206251.a	ENSGT00990000206251.b.b.a	ENSGT01100000264170	ENSGT00940000159697.b.a	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000178336	ENSGT00940000160297.c #24	ENSGT00940000160272.e.b #22	ENSGT00390000013276.e #23	ENSGT00940000166159	ENSGT00980000202943.A	ENSGT00940000166537.d	ENSGT00950000183155.a.b.a.b.c.b	ENSGT00990000210044.B	ENSGT00940000154641.A.h.b	ENSGT00940000164813.a	ENSGT00940000165396.A.a.h.a.a
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000027165	kirrel3l (ENSOMYG00000027376)	nphs1 (ENSOMYG00000067015)	ENSOMYG00000027487	ENSOMYG00000027544	ENSOMYG00000027585	ENSOMYG00000027597	tyrobp (ENSOMYG00000040581)	ENSOMYG00000040574 #15	ENSOMYG00000056129	ENSOMYG00000040532	ENSOMYG00000054162	ENSOMYG00000040511 #15	ENSOMYG00000007508	ENSOMYG00000040460 #24	gapdhs (ENSOMYG00000039320) #22	tmem147 (ENSOMYG00000039059) #23	sult2st3 (ENSOMYG00000039046)	ENSOMYG00000039034	ENSOMYG00000039013	ENSOMYG00000038969	ENSOMYG00000075134	ENSOMYG00000063512	ENSOMYG00000061225	ENSOMYG00000051645	ENSOMYG00000070328	ENSOMYG00000076645	ENSOMYG00000050561	ENSOMYG00000048906	ENSOMYG00000001914	rbm42 (ENSOMYG00000001887)
Oncorhynchus_a	ANCESTRAL SPECIES	107	ENSGT00940000159005.c.a.a.e.a.b.b	ENSGT01060000248765.a	ENSGT00980000198681.a	ENSGT00940000153695.C.c	ENSGT00990000205757.a	ENSGT00980000198998.a	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT01070000254504	ENSGT00990000206251.b.b.a	ENSGT01100000264170	ENSGT00940000159697.b.a	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000174784.a.b.b.a	ENSGT00940000178336	ENSGT00940000160297.c #24	ENSGT00940000160272.e.b #22	ENSGT00390000013276.e #23	ENSGT00940000166159	ENSGT00980000202943.A	ENSGT00940000166537.d	ENSGT00950000183155.a.b.a.b.c.b	ENSGT00990000210044.B	ENSGT00940000154641.A.h.b	ENSGT00940000164813.a	ENSGT00940000154313.c.a.k.c	ENSGT00940000165396.A.a.h.b	ENSGT00940000160881.g #31	ENSGT01000000220514	ENSGT00390000008744.c	ENSGT01080000257365.b.a.b.a.a.d.a.a	ENSGT00550000074792.b.g
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	3	kirrel3l (ENSOTSG00005030888)	ENSOTSG00005032173	ENSOTSG00005032175	ENSOTSG00005032176	ENSOTSG00005032177	ENSOTSG00005032178	ENSOTSG00005032180	ENSOTSG00005032181	ENSOTSG00005032183	ENSOTSG00005032184	hpn (ENSOTSG00005032186)	ENSOTSG00005032188 #15	ENSOTSG00005032189	ENSOTSG00005032190	ATP4A (ENSOTSG00005032196) #24	gapdhs (ENSOTSG00005032668) #22	ENSOTSG00005032677	tmem147 (ENSOTSG00005032679) #23	sult2st3 (ENSOTSG00005032683)	ENSOTSG00005032685	ENSOTSG00005032688	ENSOTSG00005032691	ENSOTSG00005032692	ENSOTSG00005032693	ENSOTSG00005032694	rbm42 (ENSOTSG00005032695)	ENSOTSG00005032697	ENSOTSG00005032698	upk1a (ENSOTSG00005032700) #31	ENSOTSG00005032702	ppox (ENSOTSG00005032715)
Chinook salmon	MODERN SPECIES	22	ENSOTSG00005027158	ENSOTSG00005027164	ENSOTSG00005027168	ENSOTSG00005027169	ENSOTSG00005027173	ENSOTSG00005027174 #15	ENSOTSG00005027176	ENSOTSG00005027179	ENSOTSG00005027180	hpn (ENSOTSG00005027182)	ENSOTSG00005027190 #15	ENSOTSG00005027191	ENSOTSG00005027194	ATP4A (ENSOTSG00005027215) #24	ENSOTSG00005028582	gapdhs (ENSOTSG00005028585) #22	tmem147 (ENSOTSG00005026675) #23	sult2st3 (ENSOTSG00005026677)	ENSOTSG00005026678	ENSOTSG00005026680	ENSOTSG00005026681	ENSOTSG00005026682	ENSOTSG00005026683	ENSOTSG00005026684	rbm42 (ENSOTSG00005026685)	ENSOTSG00005026689	ENSOTSG00005026690	upk1a (ENSOTSG00005026691) #31	ENSOTSG00005026692	ppox (ENSOTSG00005026693)	kcnj21 (ENSOTSG00005026798)
Coho salmon	MODERN SPECIES	11	ENSOKIG00005000218	ENSOKIG00005000238	ENSOKIG00005000257	ENSOKIG00005000294	ENSOKIG00005000306	ENSOKIG00005000311	ENSOKIG00005000319	ENSOKIG00005000323	ENSOKIG00005000330	hpn (ENSOKIG00005000341)	ENSOKIG00005000360 #15	ENSOKIG00005000364	ENSOKIG00005000372	ENSOKIG00005000376	ATP4A (ENSOKIG00005000532) #24	gapdhs (ENSOKIG00005000875) #22	tmem147 (ENSOKIG00005000911) #23	sult2st3 (ENSOKIG00005000921)	ENSOKIG00005000927	ENSOKIG00005000934	ENSOKIG00005000952	ENSOKIG00005000964	ENSOKIG00005000968	ENSOKIG00005000971	ENSOKIG00005000973	ENSOKIG00005000982	rbm42 (ENSOKIG00005000993)	ENSOKIG00005001006	ENSOKIG00005001013	upk1a (ENSOKIG00005001017) #31	ENSOKIG00005001021
Salmoninae_a	ANCESTRAL SPECIES	160								ENSGT00990000206251.b.b.a	ENSGT01100000264170	ENSGT00940000159697.b.a	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT01010000222294.c.b.b.a.a.b.a.a.c.a #15	ENSGT00920000149572	ENSGT00940000178336	ENSGT00940000160297.c #24	ENSGT00940000160272.f #22	ENSGT00940000160272.e.b #22	ENSGT00390000013276.e #23	ENSGT00940000166159	ENSGT00980000202943.A	ENSGT00940000166537.d	ENSGT00950000183155.a.b.a.b.c.a.b	ENSGT00940000154641.A.h.b	ENSGT00940000164813.a	ENSGT00940000165396.A.a.h.a
Salmo	ANCESTRAL SPECIES	57	ENSGT00940000160603.c	ENSGT00940000159510.d	ENSGT00940000159005.c.a.a.e.a.b.b.d	ENSGT01060000248765.a	ENSGT00980000198681.a	ENSGT00940000153695.C.c	ENSGT00990000205757.a	ENSGT00980000198998.a	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00990000206251.b.b.a	ENSGT01100000264170	ENSGT00940000159697.b.a	ENSGT00920000149572	ENSGT00940000178336	ENSGT00940000160297.c #24	ENSGT00940000160272.f #22	ENSGT00390000013276.e #23	ENSGT00940000166159	ENSGT00980000202943.A	ENSGT00940000166537.d	ENSGT00990000210044.C.a	ENSGT00940000154641.A.h.a	ENSGT00940000164813.a	ENSGT00940000165396.A.b	ENSGT00940000165396.A.a.h.b	ENSGT00940000160881.j #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744.c	ENSGT01080000257365.b.a.b.a.a.c.b	ENSGT00550000074792.b.g	ENSGT00940000160345.d
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000019115	kirrel3l (ENSSSAG00000056724)	ENSSSAG00000097549	ENSSSAG00000039055	ENSSSAG00000039365	fxyd7 (ENSSSAG00000039402)	ENSSSAG00000039478	ENSSSAG00000112846	ENSSSAG00000039614 #15	ENSSSAG00000039662	ENSSSAG00000104002	ENSSSAG00000039705	ENSSSAG00000039816 #15	ENSSSAG00000101911 #15	ENSSSAG00000055874 #24	gapdhs (ENSSSAG00000044827) #22	tm147 (ENSSSAG00000045011) #23	sult2st3 (ENSSSAG00000087691)	ENSSSAG00000121466	ENSSSAG00000053828	ENSSSAG00000045446	ENSSSAG00000097145	ENSSSAG00000121693	ENSSSAG00000084087	ENSSSAG00000114647	ENSSSAG00000087902	ENSSSAG00000053790	ENSSSAG00000085709	ENSSSAG00000101540	ENSSSAG00000108411	ENSSSAG00000089992
River trout	MODERN SPECIES	30	ENSSTUG00000017800	ENSSTUG00000017833	ENSSTUG00000017845	ENSSTUG00000017850	ENSSTUG00000017866	ENSSTUG00000017872	ENSSTUG00000017880	ENSSTUG00000017889 #15	ENSSTUG00000017893 #15	ENSSTUG00000017899	ENSSTUG00000017905	hpn (ENSSTUG00000017917)	ENSSTUG00000017943	ENSSTUG00000017951	ATP4A (ENSSTUG00000017972) #24	gapdhs (ENSSTUG00000018446) #22	tmem147 (ENSSTUG00000018567) #23	sult2st3 (ENSSTUG00000018586)	ENSSTUG00000018610	ENSSTUG00000018635	ENSSTUG00000018707	ENSSTUG00000018737	ENSSTUG00000018760	ENSSTUG00000018994	ENSSTUG00000019001	ENSSTUG00000019010	ENSSTUG00000019016	ENSSTUG00000019028	rbm42 (ENSSTUG00000019049)	ENSSTUG00000019062	ENSSTUG00000019099
Huchen	DUPLICATION
Huchen	MODERN SPECIES	334								hpn (ENSHHUG00000034163)	ENSHHUG00000034157 #15	ENSHHUG00000034155 #15	ENSHHUG00000034154 #24	ENSHHUG00000034153	ENSHHUG00000034149 #24	ENSHHUG00000034140 #24	ENSHHUG00000034136 #24	gapdhs (ENSHHUG00000033904) #22	tmem147 (ENSHHUG00000033883) #23	sult2st3 (ENSHHUG00000033878)	ENSHHUG00000033872	ENSHHUG00000033823	ENSHHUG00000033817	ENSHHUG00000033782	ENSHHUG00000033779	ENSHHUG00000033761	rbm42 (ENSHHUG00000033748)	ENSHHUG00000033741	ENSHHUG00000033737	ENSHHUG00000033734	upk1a (ENSHHUG00000033721) #31	ENSHHUG00000033700	ppox (ENSHHUG00000033688)
Huchen	MODERN SPECIES	661															ATP4A (ENSHHUG00000013193) #24	gapdhs (ENSHHUG00000012300) #22	tmem147 (ENSHHUG00000012267) #23	ENSHHUG00000012244	ENSHHUG00000012232	cd22 (ENSHHUG00000012210) #15	ENSHHUG00000012133	ENSHHUG00000012127	rbm42 (ENSHHUG00000012122)	ENSHHUG00000012107	upk1a (ENSHHUG00000012102) #31	ppox (ENSHHUG00000012084)	kcnj21 (ENSHHUG00000012078)	fbl (ENSHHUG00000012055)	ENSHHUG00000012051	dyrk1b (ENSHHUG00000012045)	zp3d.1 (ENSHHUG00000012034)
Northern pike	MODERN SPECIES	19	kirrel3l (ENSELUG00000021637)	nphs1 (ENSELUG00000021724)	ENSELUG00000021748	ENSELUG00000021764	ENSELUG00000021782	ENSELUG00000021812	ENSELUG00000021827	ENSELUG00000021851	ENSELUG00000021878 #15	ENSELUG00000031887	hpn (ENSELUG00000021979)	fxyd11 (ENSELUG00000022003)	PLM (ENSELUG00000022144)	ENSELUG00000022165	ATP4A (ENSELUG00000022207) #24	gapdhs (ENSELUG00000022244) #22	tmem147 (ENSELUG00000022334) #23	sult2st3 (ENSELUG00000022352)	ENSELUG00000022393	rbm42 (ENSELUG00000022403)	ENSELUG00000022419	ENSELUG00000022443	ppox (ENSELUG00000022493)	fbl (ENSELUG00000022537)	dyrk1b (ENSELUG00000022570)	zp3d.1 (ENSELUG00000022593)	aldh2.2 (ENSELUG00000022625)	ENSELUG00000022649	fzd6 (ENSELUG00000022683)	slc25a32b (ENSELUG00000022726)	TRNAU1AP (ENSELUG00000022790)
Acanthomorphata	ANCESTRAL SPECIES	107	ENSGT00940000153859.b	ENSGT00940000160768	ENSGT00390000011435	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT01010000222294.c.b.b.a.a.b.a.a #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00390000018110	ENSGT00940000157222.b	ENSGT00390000009988	ENSGT00530000063461.A.a
Cod	MODERN SPECIES	2	FAM83A (ENSGMOG00000029860)	C8orf76 (ENSGMOG00000009500)	ZHX1 (ENSGMOG00000033176)	ENSGMOG00000030641	ATAD2 (ENSGMOG00000009521)	ENSGMOG00000009564	mrpl32 (ENSGMOG00000030428)	ENSGMOG00000009582	ENSGMOG00000009590	ENSGMOG00000026393	ENSGMOG00000033904	ENSGMOG00000000834	ENSGMOG00000000842	ENSGMOG00000015948 #15	ENSGMOG00000036732	ENSGMOG00000015986 #22	ENSGMOG00000022393	ENSGMOG00000006463	ENSGMOG00000035996	ENSGMOG00000006475	ENSGMOG00000012660	ENSGMOG00000012663	ENSGMOG00000006506	FBL (ENSGMOG00000007678)	DYRK1B (ENSGMOG00000007672)	ENSGMOG00000007666	ENSGMOG00000022292	ENSGMOG00000015385	ENSGMOG00000034456	ENSGMOG00000002963	ENSGMOG00000015429
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT01100000263583	ENSGT01030000235509	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000178336	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00940000178184	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b
Pinecone sodierfish	MODERN SPECIES	7	ENSMMDG00005012575	zgc:101716 (ENSMMDG00005012572)	ZHX1 (ENSMMDG00005012571)	ATAD2 (ENSMMDG00005012472)	psma2a (ENSMMDG00005012431)	mrpl32 (ENSMMDG00005012429)	ENSMMDG00005012428	ccdc127a (ENSMMDG00005012427)	sdha (ENSMMDG00005009277)	fxyd3 (ENSMMDG00005009197)	ENSMMDG00005009194	ENSMMDG00005009191 #15	hpn (ENSMMDG00005009181)	ENSMMDG00005009173 #15	SCX (ENSMMDG00005009170)	gapdhs (ENSMMDG00005009131) #22	ENSMMDG00005009120	tmem147 (ENSMMDG00005009117) #23	sult2st3 (ENSMMDG00005009114)	ENSMMDG00005009113	ENSMMDG00005008321	rwdd1 (ENSMMDG00005008279)	calhm5.1 (ENSMMDG00005023417)	calhm6 (ENSMMDG00005023416)	cnot10 (ENSMMDG00005023045)	TCAIM (ENSMMDG00005022916)	CNDP1 (ENSMMDG00005022820)	ZNF407 (ENSMMDG00005022816)	PTGR3 (ENSMMDG00005022815)	TSHZ1 (ENSMMDG00005022813)	ZNF516 (ENSMMDG00005022812)
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT01100000263583	ENSGT01030000235509	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000178336	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00940000178184	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b
Tiger tail seahorse	MODERN SPECIES	425	zhx2a (ENSHCOG00000010067)	derl1 (ENSHCOG00000010062)	ENSHCOG00000010028	ENSHCOG00000010005	zgc:101716 (ENSHCOG00000009978)	ZHX1 (ENSHCOG00000009971)	ATAD2 (ENSHCOG00000009954)	psma2a (ENSHCOG00000009873)	mrpl32 (ENSHCOG00000009839)	ccdc127a (ENSHCOG00000009822)	sdha (ENSHCOG00000009811)	fxyd3 (ENSHCOG00000009776)	ENSHCOG00000009764	hpn (ENSHCOG00000009755)	SCX (ENSHCOG00000009747)	gapdhs (ENSHCOG00000009741) #22	tmem147 (ENSHCOG00000000777) #23	sult2st3 (ENSHCOG00000009704)	ENSHCOG00000009699	ENSHCOG00000009688	ENSHCOG00000009670	ENSHCOG00000009573	TRAK1 (ENSHCOG00000000813)	ENSHCOG00000009551	ENSHCOG00000009542	ctnnb1 (ENSHCOG00000009527)	ENSHCOG00000009480	zgc:110410 (ENSHCOG00000009466)	CSMD3 (ENSHCOG00000009432)	ENSHCOG00000009255	ENSHCOG00000009248
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475
Tetraodontidae	ANCESTRAL SPECIES	14	ENSGT00950000182893.a.a.a.b.c	ENSGT00530000063156.b	ENSGT00940000153859.b	ENSGT00940000160768	ENSGT00390000011435	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000008818	ENSGT00910000144277	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917.j	ENSGT00940000170917.i	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00390000018131	ENSGT00940000157815.a
Fugu	MODERN SPECIES	19	ENSTRUG00000021531	ENSTRUG00000000220	ENSTRUG00000003715	zgc:91890 (ENSTRUG00000019817)	NFATC1 (ENSTRUG00000022286)	SALL3 (ENSTRUG00000027801)	ENSTRUG00000017436	ENSTRUG00000017445	ENSTRUG00000022186	mbpb (ENSTRUG00000026841)	ZNF236 (ENSTRUG00000017456)	ENSTRUG00000017489	TSHZ1 (ENSTRUG00000017496)	PTGR3 (ENSTRUG00000031863)	scx (ENSTRUG00000017355)	gapdhs (ENSTRUG00000017358) #22	tmem147 (ENSTRUG00000020274) #23	sult2st3 (ENSTRUG00000017363)	ENSTRUG00000017365	ENSTRUG00000001349	ccka (ENSTRUG00000033262)	TRAK1 (ENSTRUG00000002103)	ENSTRUG00000023730	ENSTRUG00000028523	ENSTRUG00000021550	ctnnb1 (ENSTRUG00000003520)	ENSTRUG00000022817	ENSTRUG00000021515	ENSTRUG00000004209	hint3 (ENSTRUG00000025297)	trmt11 (ENSTRUG00000004275)
Tetraodon	MODERN SPECIES	23	zhx2a (ENSTNIG00000019074)	derl1 (ENSTNIG00000019075)	TBC1D31 (ENSTNIG00000019076)	FAM83A (ENSTNIG00000019077)	C8orf76 (ENSTNIG00000019078)	ZHX1 (ENSTNIG00000019079)	ATAD2 (ENSTNIG00000019080)	psma2a (ENSTNIG00000019081)	ccdc127a (ENSTNIG00000019082)	sdha (ENSTNIG00000019083)	ENSTNIG00000001049 #15	ENSTNIG00000019084	hpn (ENSTNIG00000019085)	ENSTNIG00000019086 #15	SCX (ENSTNIG00000019087)	gapdhs (ENSTNIG00000019088) #22	tmem147 (ENSTNIG00000019089) #23	sult2st3 (ENSTNIG00000019090)	ENSTNIG00000019091	ENSTNIG00000019092	ccka (ENSTNIG00000019093)	ctnnb1 (ENSTNIG00000019094)	ENSTNIG00000019095	ENSTNIG00000019096	hint3 (ENSTNIG00000019097)	trmt11 (ENSTNIG00000019098)	rspo3 (ENSTNIG00000019099)	mdh2 (ENSTNIG00000019100)	RNF146 (ENSTNIG00000019101)	ECHDC1 (ENSTNIG00000019102)	SOGA3 (ENSTNIG00000019103)
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475
Ballan wrasse	MODERN SPECIES	3	ATAD2 (ENSLBEG00000005948)	psma2a (ENSLBEG00000006026)	mrpl32 (ENSLBEG00000006081)	ENSLBEG00000006096	ccdc127a (ENSLBEG00000006108)	sdha (ENSLBEG00000006135)	si:ch73-343g19.4 (ENSLBEG00000006205)	ENSLBEG00000006227	fxyd11 (ENSLBEG00000006259)	ENSLBEG00000006270 #15	ENSLBEG00000006287 #15	hpn (ENSLBEG00000006312)	ENSLBEG00000006343 #15	ENSLBEG00000006414 #15	SCX (ENSLBEG00000006454)	gapdhs (ENSLBEG00000006474) #22	tmem147 (ENSLBEG00000006517) #23	sult2st3 (ENSLBEG00000006618)	ENSLBEG00000006980	ENSLBEG00000007052	ccka (ENSLBEG00000007237)	TRAK1 (ENSLBEG00000007300)	ENSLBEG00000007363	ENSLBEG00000007382	ctnnb1 (ENSLBEG00000007409)	ENSLBEG00000007477	ENSLBEG00000007503	ENSLBEG00000007543	hint3 (ENSLBEG00000007591)	ENSLBEG00000007609	trmt11 (ENSLBEG00000007644)
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475
European seabass	MODERN SPECIES	6	ENSDLAG00005001780	ENSDLAG00005001650	ENSDLAG00005030144	ENSDLAG00005001628	ENSDLAG00005034650	ENSDLAG00005001080	ENSDLAG00005031378	ENSDLAG00005033997	fxyd11 (ENSDLAG00005033296)	ENSDLAG00005001011 #15	ENSDLAG00005035130 #15	ENSDLAG00005000986	ENSDLAG00005000980 #15	ENSDLAG00005000973 #15	ENSDLAG00005000968	gapdhs (ENSDLAG00005000912) #22	ENSDLAG00005000897	tmem147 (ENSDLAG00005033909) #23	ENSDLAG00005000894	sult2st3 (ENSDLAG00005000892)	ENSDLAG00005000888	ENSDLAG00005000884	ENSDLAG00005000484	ENSDLAG00005004154	TRAK1 (ENSDLAG00005000326)	ENSDLAG00005000314	ctnnb1 (ENSDLAG00005000217)	ENSDLAG00005022940	ENSDLAG00005029313	ENSDLAG00005022925	ENSDLAG00005034309
Large yellow croaker	MODERN SPECIES	484	ATAD2 (ENSLCRG00005004451)	psma2b (ENSLCRG00005004262)	mrpl32 (ENSLCRG00005004249)	ENSLCRG00005004243	ccdc127a (ENSLCRG00005004227)	sdha (ENSLCRG00005003634)	si:dkey-33i11.9 (ENSLCRG00005003542)	ENSLCRG00005003516	ENSLCRG00005003505	ENSLCRG00005003494 #15	ENSLCRG00005003485 #15	hpn (ENSLCRG00005003474)	ENSLCRG00005003448 #15	SCX (ENSLCRG00005003436)	ENSLCRG00005003408 #15	gapdhs (ENSLCRG00005003181) #22	ENSLCRG00005003057	sult2st3 (ENSLCRG00005002984)	ENSLCRG00005021082	ENSLCRG00005021008	ccka (ENSLCRG00005020965)	TRAK1 (ENSLCRG00005020918)	ENSLCRG00005020871	ENSLCRG00005020850	ctnnb1 (ENSLCRG00005020441)	ENSLCRG00005020402	ENSLCRG00005020392	ENSLCRG00005020386	hint3 (ENSLCRG00005020382)	ENSLCRG00005020380	trmt11 (ENSLCRG00005020374)
Gilthead seabream	MODERN SPECIES	8	zgc:101716 (ENSSAUG00010014589)	ZHX1 (ENSSAUG00010014591)	ATAD2 (ENSSAUG00010014600)	psma2a (ENSSAUG00010014669)	mrpl32 (ENSSAUG00010014679)	ENSSAUG00010014681	ccdc127a (ENSSAUG00010014684)	SDHA (ENSSAUG00010014692)	ENSSAUG00010015370	fxyd3 (ENSSAUG00010015371)	ENSSAUG00010015372 #15	hpn (ENSSAUG00010015373)	ENSSAUG00010015374 #15	ENSSAUG00010015376 #15	SCX (ENSSAUG00010015379)	gapdhs (ENSSAUG00010015390) #22	ENSSAUG00010015984	tmem147 (ENSSAUG00010015985) #23	sult2st3 (ENSSAUG00010015987)	ENSSAUG00010015992	ENSSAUG00010015996	ENSSAUG00010015997	ENSSAUG00010016015	ENSSAUG00010017852	TRAK1 (ENSSAUG00010017860)	ENSSAUG00010017872	ctnnb1 (ENSSAUG00010017891)	ENSSAUG00010018951	ENSSAUG00010018955	ENSSAUG00010018965	hint3 (ENSSAUG00010018967)
Perciformes	ANCESTRAL SPECIES	3	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000178336.c	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Cottioidei	ANCESTRAL SPECIES	7									ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131	ENSGT00940000157815.a
Lumpfish	MODERN SPECIES	7	tmem106ba (ENSCLMG00005001981)	THSD7A (ENSCLMG00005001988)	ENSCLMG00005002052	ICA1 (ENSCLMG00005002057)	ENSCLMG00005002064	mios (ENSCLMG00005002068)	ENSCLMG00005002078	septin7b (ENSCLMG00005002087)	ENSCLMG00005002114	fxyd3 (ENSCLMG00005002115)	ENSCLMG00005002116	ENSCLMG00005002117 #15	ENSCLMG00005002119 #15	hpn (ENSCLMG00005002120)	SCX (ENSCLMG00005002125)	gapdhs (ENSCLMG00005002129) #22	ENSCLMG00005002199	ENSCLMG00005002200	tmem147 (ENSCLMG00005002204) #23	ENSCLMG00005002208	sult2st3 (ENSCLMG00005002209)	ENSCLMG00005002211	ENSCLMG00005002222	ENSCLMG00005002350	TRAK1 (ENSCLMG00005002374)	ENSCLMG00005004877	ctnnb1 (ENSCLMG00005004892)	ENSCLMG00005005793	ENSCLMG00005005800	hint3 (ENSCLMG00005005802)	ENSCLMG00005005804
Stickleback	MODERN SPECIES	19	C8orf76 (ENSGACG00000005669)	ENSGACG00000005677	ZHX1 (ENSGACG00000005679)	ATAD2 (ENSGACG00000005685)	psma2a (ENSGACG00000005705)	mrpl32 (ENSGACG00000005754)	ccdc127a (ENSGACG00000005756)	sdha (ENSGACG00000005763)	ENSGACG00000005836	ENSGACG00000005839	ENSGACG00000005841	ENSGACG00000005846	ENSGACG00000005850	hpn (ENSGACG00000005855)	SCX (ENSGACG00000005863)	gapdhs (ENSGACG00000005864) #22	tmem147 (ENSGACG00000005967) #23	sult2st3 (ENSGACG00000005973)	ENSGACG00000005994	TRAK1 (ENSGACG00000006003)	ENSGACG00000006021	ctnnb1 (ENSGACG00000006037)	ENSGACG00000006045	ENSGACG00000006051	trmt11 (ENSGACG00000006060)	rspo3 (ENSGACG00000006080)	mdh2 (ENSGACG00000006087)	RNF146 (ENSGACG00000006092)	ECHDC1 (ENSGACG00000006095)	ENSGACG00000006118	SOGA3 (ENSGACG00000006121)
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT01100000263583	ENSGT01030000235509	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00940000178336.c	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131	ENSGT00940000157815.a
Pike perch	MODERN SPECIES	49	ZHX1 (ENSSLUG00000002574)	ATAD2 (ENSSLUG00000002496)	psma2a (ENSSLUG00000002462)	mrpl32 (ENSSLUG00000002454)	ENSSLUG00000002447	ccdc127a (ENSSLUG00000002441)	sdha (ENSSLUG00000001847)	fxyd3 (ENSSLUG00000001559)	ENSSLUG00000001547	ENSSLUG00000001541	ENSSLUG00000001538	hpn (ENSSLUG00000001519)	ENSSLUG00000001486 #15	SCX (ENSSLUG00000019659)	ENSSLUG00000019654	gapdhs (ENSSLUG00000019196) #22	tmem147 (ENSSLUG00000019163) #23	sult2st3 (ENSSLUG00000019156)	sult2st3 (ENSSLUG00000019145)	ENSSLUG00000019140	ENSSLUG00000018663	ccka (ENSSLUG00000018622)	TRAK1 (ENSSLUG00000018498)	ENSSLUG00000018471	ctnnb1 (ENSSLUG00000016827)	ENSSLUG00000016748	ENSSLUG00000016745	ENSSLUG00000016742	hint3 (ENSSLUG00000016738)	ENSSLUG00000016734	trmt11 (ENSSLUG00000016722)
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT00940000178336.c	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Carangaria	ANCESTRAL SPECIES	1	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT00940000178336.c	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT00940000178336.c	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Seriola	ANCESTRAL SPECIES	16	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT01100000263583	ENSGT01070000253873	ENSGT00940000178336.c	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131	ENSGT00940000157815.a
Greater amberjack	MODERN SPECIES	75	FAM83A (ENSSDUG00000011491)	zgc:101716 (ENSSDUG00000011504)	ENSSDUG00000011512	ZHX1 (ENSSDUG00000011542)	ENSSDUG00000011569	psma2a (ENSSDUG00000011656)	mrpl32 (ENSSDUG00000011693)	ENSSDUG00000011711	ccdc127a (ENSSDUG00000011724)	sdha (ENSSDUG00000011732)	ENSSDUG00000011769	ENSSDUG00000011781	hpn (ENSSDUG00000011801)	ENSSDUG00000011841 #15	SCX (ENSSDUG00000011869)	gapdhs (ENSSDUG00000011880) #22	tmem147 (ENSSDUG00000011912) #23	ENSSDUG00000011932	ENSSDUG00000011940	sult2st3 (ENSSDUG00000011952)	ENSSDUG00000011969	ENSSDUG00000011984	ENSSDUG00000012004	ccka (ENSSDUG00000012097)	TRAK1 (ENSSDUG00000012135)	ENSSDUG00000012201	ctnnb1 (ENSSDUG00000012298)	ENSSDUG00000012403	ENSSDUG00000012408	ENSSDUG00000012422	hint3 (ENSSDUG00000012433)
Yellowtail amberjack	MODERN SPECIES	2851	ZHX1 (ENSSLDG00000013310)	ATAD2 (ENSSLDG00000013335)	psma2a (ENSSLDG00000013476)	mrpl32 (ENSSLDG00000013498)	ENSSLDG00000013512	ccdc127a (ENSSLDG00000013524)	sdha (ENSSLDG00000013543)	ENSSLDG00000013594	ENSSLDG00000013608	ENSSLDG00000013624	ENSSLDG00000013637	hpn (ENSSLDG00000013655)	ENSSLDG00000013679 #15	ENSSLDG00000013691 #15	SCX (ENSSLDG00000013707)	gapdhs (ENSSLDG00000013732) #22	tmem147 (ENSSLDG00000013776) #23	sult2st3 (ENSSLDG00000013800)	ENSSLDG00000013919	ccka (ENSSLDG00000014144)	TRAK1 (ENSSLDG00000014182)	ENSSLDG00000014268	ctnnb1 (ENSSLDG00000014294)	ENSSLDG00000014359	ENSSLDG00000014371	ENSSLDG00000014386	hint3 (ENSSLDG00000014408)	ENSSLDG00000014426	trmt11 (ENSSLDG00000014435)	rspo3 (ENSSLDG00000014461)	mdh2 (ENSSLDG00000014478)
Barramundi perch	MODERN SPECIES	17	ATAD2 (ENSLCAG00010016506)	psma2a (ENSLCAG00010016628)	mrpl32 (ENSLCAG00010016635)	ENSLCAG00010016641	ccdc127a (ENSLCAG00010016648)	sdha (ENSLCAG00010016668)	si:ch73-343g19.4 (ENSLCAG00010016712)	ENSLCAG00010016714	fxyd11 (ENSLCAG00010016718)	ENSLCAG00010016721	ENSLCAG00010016724 #15	hpn (ENSLCAG00010016727)	ENSLCAG00010016729 #15	ENSLCAG00010016731 #15	SCX (ENSLCAG00010016734)	gapdhs (ENSLCAG00010016744) #22	ENSLCAG00010016788	ENSLCAG00010016791	tmem147 (ENSLCAG00010016796) #23	sult2st3 (ENSLCAG00010016805)	ENSLCAG00010016808	ENSLCAG00010016875	ccka (ENSLCAG00010016989)	TRAK1 (ENSLCAG00010016991)	ENSLCAG00010016998	ctnnb1 (ENSLCAG00010017054)	ENSLCAG00010017244	ENSLCAG00010017246	hint3 (ENSLCAG00010017248)	ENSLCAG00010017250	trmt11 (ENSLCAG00010017272)
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01030000235509	ENSGT01040000244371	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Tongue sole	MODERN SPECIES	4	ENSCSEG00000003527	CYTH2 (ENSCSEG00000003531)	ENSCSEG00000003541	zgc:158689 (ENSCSEG00000003557)	ndufa3 (ENSCSEG00000003564)	tfpt (ENSCSEG00000003570)	cnot3a (ENSCSEG00000003574)	CDKAL1 (ENSCSEG00000003605)	ENSCSEG00000003620	mboat1 (ENSCSEG00000003622)	TMEM65 (ENSCSEG00000003628)	MTSS1 (ENSCSEG00000003637)	ENSCSEG00000003668 #15	ENSCSEG00000003682 #15	SCX (ENSCSEG00000003700)	gapdhs (ENSCSEG00000003701) #22	ENSCSEG00000003716	tmem147 (ENSCSEG00000003720) #23	sult2st3 (ENSCSEG00000003725)	ENSCSEG00000003730	ENSCSEG00000003744	ccka (ENSCSEG00000003756)	TRAK1 (ENSCSEG00000003758)	ENSCSEG00000003765	ctnnb1 (ENSCSEG00000003769)	ENSCSEG00000003793	CCN3 (ENSCSEG00000003798)	scgn (ENSCSEG00000003802)	CARMIL1 (ENSCSEG00000003813)	ENSCSEG00000003830	TNFRSF11B (ENSCSEG00000003835)
Turbot	MODERN SPECIES		C8orf76 (ENSSMAG00000007260)	ZHX1 (ENSSMAG00000007251)	ATAD2 (ENSSMAG00000007172)	ENSSMAG00000007148	mrpl32 (ENSSMAG00000027043)	ENSSMAG00000037042	ENSSMAG00000007060	ENSSMAG00000032484	fxyd3 (ENSSMAG00000007009)	ENSSMAG00000029379	ENSSMAG00000006982 #15	ENSSMAG00000006913	ENSSMAG00000006882 #15	ENSSMAG00000034301 #15	ENSSMAG00000006873	ENSSMAG00000006856 #22	ENSSMAG00000006843	tmem147 (ENSSMAG00000035269) #23	ENSSMAG00000006783	ENSSMAG00000006716	ENSSMAG00000006687	TRAK1 (ENSSMAG00000006660)	ULK4 (ENSSMAG00000036017)	ENSSMAG00000006822	ctnnb1 (ENSSMAG00000006590)	ENSSMAG00000034968	ENSSMAG00000027979	ENSSMAG00000031528	hint3 (ENSSMAG00000028956)	ENSSMAG00000006507	trmt11 (ENSSMAG00000006405)
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000178184	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131	ENSGT00940000157815.a
Zig-zag eel	MODERN SPECIES	7	FAM83A (ENSMAMG00000028236)	C8orf76 (ENSMAMG00000000792)	ZHX1 (ENSMAMG00000000778)	ATAD2 (ENSMAMG00000000712)	ENSMAMG00000000647	mrpl32 (ENSMAMG00000000634)	ENSMAMG00000026399	ENSMAMG00000000526	ENSMAMG00000000501	ENSMAMG00000000475	ENSMAMG00000000442 #15	ENSMAMG00000028492 #15	ENSMAMG00000000372	ENSMAMG00000000362 #15	ENSMAMG00000000358	gapdhs (ENSMAMG00000024082) #22	ENSMAMG00000024081	tmem147 (ENSMAMG00000024080) #23	sult2st3 (ENSMAMG00000024079)	sult2st3 (ENSMAMG00000024078)	ENSMAMG00000024077	ENSMAMG00000024076	ENSMAMG00000024075	TRAK1 (ENSMAMG00000024074)	ENSMAMG00000024073	ctnnb1 (ENSMAMG00000024072)	ENSMAMG00000024070	ENSMAMG00000026933	hint3 (ENSMAMG00000025035)	ENSMAMG00000024263	trmt11 (ENSMAMG00000024066)
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131	ENSGT00940000157815.a	ENSGT00390000016686
Siamese fighting fish	MODERN SPECIES	7	ZHX1 (ENSBSLG00000026534)	ATAD2 (ENSBSLG00000026522)	psma2a (ENSBSLG00000026492)	mrpl32 (ENSBSLG00000026490)	ENSBSLG00000026489	ccdc127a (ENSBSLG00000026486)	sdha (ENSBSLG00000026479)	ENSBSLG00000026473	ENSBSLG00000026471	fxyd11 (ENSBSLG00000026468)	ENSBSLG00000026464	hpn (ENSBSLG00000026462)	ENSBSLG00000026456 #15	ENSBSLG00000026454 #15	SCX (ENSBSLG00000026451)	gapdhs (ENSBSLG00000026442) #22	tmem147 (ENSBSLG00000026439) #23	sult2st3 (ENSBSLG00000026436)	ENSBSLG00000026434	ENSBSLG00000026432	ENSBSLG00000026410	ccka (ENSBSLG00000026391)	TRAK1 (ENSBSLG00000026380)	ENSBSLG00000026344	ctnnb1 (ENSBSLG00000024822)	ENSBSLG00000024775	ENSBSLG00000024769	hint3 (ENSBSLG00000024760)	ENSBSLG00000024752	trmt11 (ENSBSLG00000024732)	rspo3 (ENSBSLG00000024607)
Climbing perch	MODERN SPECIES	7	ZHX1 (ENSATEG00000024460)	ATAD2 (ENSATEG00000024449)	ENSATEG00000024447	mrpl32 (ENSATEG00000024446)	ENSATEG00000028820	ENSATEG00000025846	ENSATEG00000024442	ENSATEG00000024438	fxyd11 (ENSATEG00000026881)	ENSATEG00000024435 #15	ENSATEG00000024433 #15	ENSATEG00000024430	ENSATEG00000026953 #15	ENSATEG00000028030 #15	ENSATEG00000024429	gapdhs (ENSATEG00000024426) #22	tmem147 (ENSATEG00000024422) #23	sult2st3 (ENSATEG00000024421)	ENSATEG00000024415	ENSATEG00000024406	ENSATEG00000027989	TRAK1 (ENSATEG00000024397)	ENSATEG00000024390	ctnnb1 (ENSATEG00000024383)	ENSATEG00000026721	ENSATEG00000024375	hint3 (ENSATEG00000024372)	ENSATEG00000027433	trmt11 (ENSATEG00000024365)	rspo3 (ENSATEG00000024363)	ENSATEG00000029395
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000178336	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131	ENSGT00940000157815.a
Oryzias	ANCESTRAL SPECIES	2	ENSGT00390000011435	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.b	ENSGT00940000155141.w.b.a	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00390000011435	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.b	ENSGT00940000155141.w.b.a	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Indian medaka	MODERN SPECIES	5	ENSOMEG00000017871	TBC1D31 (ENSOMEG00000017650)	zgc:101716 (ENSOMEG00000017557)	ZHX1 (ENSOMEG00000017537)	ATAD2 (ENSOMEG00000017511)	psma2a (ENSOMEG00000017376)	mrpl32 (ENSOMEG00000017332)	ccdc127a (ENSOMEG00000017320)	sdha (ENSOMEG00000017294)	si:ch73-343g19.4 (ENSOMEG00000017230)	ENSOMEG00000017205	fxyd11 (ENSOMEG00000017173)	hpn (ENSOMEG00000017153)	ENSOMEG00000017129 #15	SCX (ENSOMEG00000017080)	gapdhs (ENSOMEG00000017052) #22	ENSOMEG00000000424	tmem147 (ENSOMEG00000016981) #23	sult2st3 (ENSOMEG00000016954)	ENSOMEG00000016920	ENSOMEG00000016882	ENSOMEG00000016789	TRAK1 (ENSOMEG00000016749)	ENSOMEG00000016613	ctnnb1 (ENSOMEG00000016430)	ENSOMEG00000016321	ENSOMEG00000016297	ENSOMEG00000016244	hint3 (ENSOMEG00000016230)	ENSOMEG00000016216	trmt11 (ENSOMEG00000016205)
Javanese ricefish	MODERN SPECIES	7	psma2a (ENSOJAG00000004953)	mrpl32 (ENSOJAG00000004934)	ccdc127a (ENSOJAG00000004923)	sdha (ENSOJAG00000004654)	ENSOJAG00000004607	ENSOJAG00000004598	ENSOJAG00000004575	ENSOJAG00000004539	fxyd3 (ENSOJAG00000004524)	ENSOJAG00000004496	ENSOJAG00000004471	hpn (ENSOJAG00000004451)	ENSOJAG00000004432 #15	ENSOJAG00000004415 #15	SCX (ENSOJAG00000004401)	gapdhs (ENSOJAG00000003781) #22	ENSOJAG00000003613	tmem147 (ENSOJAG00000003585) #23	sult2st3 (ENSOJAG00000003562)	ENSOJAG00000003542	ENSOJAG00000003009	TRAK1 (ENSOJAG00000002861)	ENSOJAG00000002808	ctnnb1 (ENSOJAG00000002203)	ENSOJAG00000001949	ENSOJAG00000023339	ENSOJAG00000023336	hint3 (ENSOJAG00000023334)	ENSOJAG00000023331	trmt11 (ENSOJAG00000023316)	rspo3 (ENSOJAG00000023303)
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00390000011435	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159.i	ENSGT00940000166159.j	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.b	ENSGT00940000155141.w.b.a	ENSGT00510000047616.b	ENSGT00940000165475
Japanese Medaka HdrR	MODERN SPECIES	7	zgc:101716 (ENSORLG00000006239)	ZHX1 (ENSORLG00000023552)	ATAD2 (ENSORLG00000006230)	psma2a (ENSORLG00000006211)	mrpl32 (ENSORLG00000006185)	ccdc127a (ENSORLG00000006174)	sdha (ENSORLG00000006164)	ENSORLG00000006089	fxyd3 (ENSORLG00000029915)	fxyd11 (ENSORLG00000030247)	ENSORLG00000006072	hpn (ENSORLG00000006062)	ENSORLG00000027865 #15	ENSORLG00000022869 #15	SCX (ENSORLG00000006041)	gapdhs (ENSORLG00000006033) #22	ENSORLG00000026551	tmem147 (ENSORLG00000006016) #23	sult2st3 (ENSORLG00000029133)	sult2st3 (ENSORLG00000024619)	ENSORLG00000005997	ENSORLG00000005983	ENSORLG00000005949	TRAK1 (ENSORLG00000005943)	ENSORLG00000005866	ctnnb1 (ENSORLG00000005845)	ENSORLG00000030585	ENSORLG00000023729	ENSORLG00000005815	ENSORLG00000024955	hint3 (ENSORLG00000026540)
Chinese medaka	MODERN SPECIES	495	ENSOSIG00000017189	ZHX1 (ENSOSIG00000017192)	ATAD2 (ENSOSIG00000017203)	psma2a (ENSOSIG00000017322)	mrpl32 (ENSOSIG00000017377)	ccdc127a (ENSOSIG00000017379)	sdha (ENSOSIG00000017465)	ENSOSIG00000019256	si:ch73-343g19.4 (ENSOSIG00000019259)	fxyd3 (ENSOSIG00000019264)	fxyd11 (ENSOSIG00000003714)	ENSOSIG00000003727	ENSOSIG00000003735 #15	ENSOSIG00000003756 #15	SCX (ENSOSIG00000003784)	gapdhs (ENSOSIG00000003892) #22	ENSOSIG00000006121	tmem147 (ENSOSIG00000006122) #23	sult2st3 (ENSOSIG00000006123)	ENSOSIG00000006124	ENSOSIG00000006125	ENSOSIG00000006129	ccka (ENSOSIG00000006292)	TRAK1 (ENSOSIG00000006294)	ENSOSIG00000006331	ctnnb1 (ENSOSIG00000006340)	ENSOSIG00000006398	ENSOSIG00000006401	ENSOSIG00000006406	hint3 (ENSOSIG00000006412)	ENSOSIG00000006415
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000264159	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159.k.a	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131	ENSGT00940000157815.a
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000264159	ENSGT01030000235509	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b	ENSGT00390000013276 #23	ENSGT00940000166159.k.a	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.g	ENSGT00940000155141.w.b.h	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Poeciliinae	ANCESTRAL SPECIES	22	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT00940000171417.b	ENSGT01100000264159	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276.h #23	ENSGT00940000163460.a.a.a.b.b	ENSGT00390000013276.g #23	ENSGT00940000166159.k.a	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A.e	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.g	ENSGT00940000155141.w.b.h	ENSGT00510000047616.b	ENSGT00940000165475
Poecilia	ANCESTRAL SPECIES		ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT00940000171417.b	ENSGT01100000264159	ENSGT01030000235509	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276.h #23	ENSGT00940000163460.a.a.a.b.b	ENSGT00390000013276.g #23	ENSGT00940000166159.k.a	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A.e	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.g	ENSGT00940000155141.w.b.h	ENSGT00510000047616.b	ENSGT00940000165475
NAME_6	ANCESTRAL SPECIES	54	ENSGT00940000172126	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276.h #23	ENSGT00940000163460.a.a.a.b.b	ENSGT00940000163460.a.a.a.b.a	ENSGT00390000013276.g #23	ENSGT00940000166159.k.a	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A.e	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.g	ENSGT00940000155141.w.b.h	ENSGT00510000047616.b
Amazon molly	MODERN SPECIES	252	ENSPFOG00000018989	ZHX1 (ENSPFOG00000018986)	ATAD2 (ENSPFOG00000018961)	psma2a (ENSPFOG00000018952)	mrpl32 (ENSPFOG00000018949)	ENSPFOG00000018947	ccdc127a (ENSPFOG00000018945)	sdha (ENSPFOG00000018930)	ENSPFOG00000018923	ENSPFOG00000018921	ENSPFOG00000018917 #15	ENSPFOG00000018915	hpn (ENSPFOG00000018907)	ENSPFOG00000024173 #15	SCX (ENSPFOG00000018890)	gapdhs (ENSPFOG00000018873) #22	ENSPFOG00000018886	ENSPFOG00000024122	ENSPFOG00000024077	tmem147 (ENSPFOG00000023213) #23	ENSPFOG00000018897 #15	sult2st3 (ENSPFOG00000018856)	ENSPFOG00000018831	MROH1 (ENSPFOG00000018743)	ccka (ENSPFOG00000018729)	TRAK1 (ENSPFOG00000018712)	TRAK1 (ENSPFOG00000018703)	TRAK1 (ENSPFOG00000018652)	ENSPFOG00000018590	ctnnb1 (ENSPFOG00000018568)	ENSPFOG00000018566
Sailfin molly	MODERN SPECIES	555									zgc:101716 (ENSPLAG00000005811)	ENSPLAG00000005802	TBC1D31 (ENSPLAG00000005781)	derl1 (ENSPLAG00000005691)	zhx2a (ENSPLAG00000005661)	has2 (ENSPLAG00000005651)	ENSPLAG00000000730	gapdhs (ENSPLAG00000005618) #22	tmem147 (ENSPLAG00000005591) #23
Guppy	MODERN SPECIES	446	ATAD2 (ENSPREG00000013955)	psma2a (ENSPREG00000013940)	mrpl32 (ENSPREG00000013918)	ENSPREG00000013912	ccdc127a (ENSPREG00000013904)	sdha (ENSPREG00000013854)	ENSPREG00000013834	ENSPREG00000013822	ENSPREG00000013815	ENSPREG00000013808 #15	ENSPREG00000013803	hpn (ENSPREG00000013789)	ENSPREG00000013767 #15	ENSPREG00000013732 #15	SCX (ENSPREG00000013713)	gapdhs (ENSPREG00000013702) #22	ENSPREG00000013688	tmem147 (ENSPREG00000013665) #23	sult2st3 (ENSPREG00000013646)	ENSPREG00000013616	ENSPREG00000013488	ccka (ENSPREG00000013450)	TRAK1 (ENSPREG00000013360)	ENSPREG00000013207	ctnnb1 (ENSPREG00000013118)	ENSPREG00000013081	ENSPREG00000013061	ENSPREG00000013013	hint3 (ENSPREG00000012984)	ENSPREG00000012962	trmt11 (ENSPREG00000012923)
Platyfish	MODERN SPECIES	17	ATAD2 (ENSXMAG00000008949)	psma2a (ENSXMAG00000022157)	mrpl32 (ENSXMAG00000008933)	ENSXMAG00000008930	ccdc127a (ENSXMAG00000021467)	sdha (ENSXMAG00000008900)	ENSXMAG00000025121	ENSXMAG00000020918	ENSXMAG00000023582	ENSXMAG00000008893 #15	ENSXMAG00000008891	hpn (ENSXMAG00000008874)	ENSXMAG00000008872 #15	ENSXMAG00000008867 #15	SCX (ENSXMAG00000023316)	gapdhs (ENSXMAG00000008849) #22	ENSXMAG00000008842	tmem147 (ENSXMAG00000008830) #23	sult2st3 (ENSXMAG00000008813)	ENSXMAG00000008370	MROH1 (ENSXMAG00000008772)	ccka (ENSXMAG00000022838)	ENSXMAG00000023391	TRAK1 (ENSXMAG00000008737)	ENSXMAG00000008725	ctnnb1 (ENSXMAG00000008710)	ENSXMAG00000000737	ENSXMAG00000008705	ENSXMAG00000021312	ENSXMAG00000029984	hint3 (ENSXMAG00000008704)
NAME_4	ANCESTRAL SPECIES	61	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000264159	ENSGT01030000235509	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000163460.a.a.a.b.d	ENSGT00390000013276 #23	ENSGT00940000166159.k.b	ENSGT00940000177393.B	ENSGT00940000166159.k.a	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.g	ENSGT00940000155141.w.b.h	ENSGT00510000047616.b
Mummichog	MODERN SPECIES	261								ENSFHEG00000016014	ENSFHEG00000016023	ENSFHEG00000016027 #15	ENSFHEG00000016033	hpn (ENSFHEG00000016044)	ENSFHEG00000016062 #15	ENSFHEG00000016076 #15	SCX (ENSFHEG00000016092)	gapdhs (ENSFHEG00000016137) #22	ENSFHEG00000016148	tmem147 (ENSFHEG00000016175) #23	sult2st3 (ENSFHEG00000016465)	sult2st3 (ENSFHEG00000016482)	ENSFHEG00000016489	ENSFHEG00000016603	ccka (ENSFHEG00000016612)	TRAK1 (ENSFHEG00000016654)	ENSFHEG00000016662	ctnnb1 (ENSFHEG00000016713)	ENSFHEG00000016720	ENSFHEG00000016744
Sheepshead minnow	MODERN SPECIES	1618																gapdhs (ENSCVAG00000004430) #22	ENSCVAG00000004435	ENSCVAG00000004440	tmem147 (ENSCVAG00000004456) #23
Aplocheiloidei	ANCESTRAL SPECIES	26	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000264159	ENSGT01070000253873	ENSGT00940000178336	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT01070000255897	ENSGT00390000013276 #23	ENSGT00940000166159.k.b	ENSGT00940000166159.k.a	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Turquoise killifish	MODERN SPECIES	1614	ENSNFUG00015004167	MRPL32 (ENSNFUG00015004170)	ENSNFUG00015004174	sdha (ENSNFUG00015004204)	CCDC127 (ENSNFUG00015004392)	ENSNFUG00015004403	ENSNFUG00015004421	ENSNFUG00015004426	ENSNFUG00015004430	ENSNFUG00015004438	CD22 (ENSNFUG00015004447) #15	hpn (ENSNFUG00015004460)	ENSNFUG00015004466 #15	SCXA (ENSNFUG00015004476)	ENSNFUG00015004480	gapdhs (ENSNFUG00015004492) #22	ENSNFUG00015004522	tmem147 (ENSNFUG00015004536) #23	SULT2ST3 (ENSNFUG00015004557)	CABZ01054933.1 (ENSNFUG00015004580)	ENSNFUG00015000070	NCDN (ENSNFUG00015000082)	SLC6A20 (ENSNFUG00015000145)	Nfu_g_1_016842 (ENSNFUG00015000182)	ENSNFUG00015000200	popdc3 (ENSNFUG00015000217)	ENSNFUG00015000232	HACE1 (ENSNFUG00015000286)	ENSNFUG00015000337	ENSNFUG00015000345	ENSNFUG00015000349
Mangrove rivulus	MODERN SPECIES	14	ZHX1 (ENSKMAG00000021688)	ENSKMAG00000021659	psma2a (ENSKMAG00000021648)	mrpl32 (ENSKMAG00000021643)	ENSKMAG00000021638	ccdc127a (ENSKMAG00000021633)	sdha (ENSKMAG00000021615)	ENSKMAG00000021599	ENSKMAG00000021589	ENSKMAG00000021583	ENSKMAG00000021580	ENSKMAG00000021572	hpn (ENSKMAG00000021561)	ENSKMAG00000021555 #15	SCX (ENSKMAG00000021549)	gapdhs (ENSKMAG00000021533) #22	ENSKMAG00000021524	ENSKMAG00000021516	ENSKMAG00000021507	sult2st3 (ENSKMAG00000021493)	tmem147 (ENSKMAG00000021480) #23	ENSKMAG00000021467	ENSKMAG00000021431	ccka (ENSKMAG00000021415)	ENSKMAG00000021407	TRAK1 (ENSKMAG00000021354)	ENSKMAG00000021324	ctnnb1 (ENSKMAG00000021279)	ENSKMAG00000021264	ENSKMAG00000021247	ENSKMAG00000021233
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000178184	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b
Cichlidae	ANCESTRAL SPECIES	26	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000178184	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.i	ENSGT00940000164478.b	ENSGT00940000155141.w.b.j	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159.h.a	ENSGT00940000166159.g	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A.c	ENSGT00940000170917	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000155141.w.b.i	ENSGT00510000047616.b	ENSGT00940000165475	ENSGT00390000018131	ENSGT00940000157815.a
Haplochromini	ANCESTRAL SPECIES	24	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000161153.j	ENSGT00940000165158.b	ENSGT00390000013276 #23	ENSGT00940000166159.h.a	ENSGT00940000166159.g	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A.c	ENSGT00940000170917	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT01030000238186	ENSGT00940000155141.w.b.i	ENSGT00510000047616.b
Haplochromini_A	ANCESTRAL SPECIES	30	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000161153.j	ENSGT00940000165158.b	ENSGT00390000013276 #23	ENSGT00940000166159.h.a	ENSGT00940000166159.g	ENSGT00940000166159.h.b	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A.c	ENSGT00940000170917	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT01030000238186	ENSGT00940000155141.w.b.i
Haplochromini_B	ANCESTRAL SPECIES	42	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00940000161153.j	ENSGT00940000165158.b	ENSGT00390000013276 #23	ENSGT00940000166159.h.a	ENSGT00940000166159.g	ENSGT00940000166159.h.b	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A.c	ENSGT00940000170917	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT01030000238186	ENSGT00940000155141.w.b.i
Eastern happy	MODERN SPECIES	2	psma2a (ENSACLG00000021687)	mrpl32 (ENSACLG00000021664)	ENSACLG00000021656	ccdc127a (ENSACLG00000021649)	sdha (ENSACLG00000021598)	si:ch73-343g19.4 (ENSACLG00000021582)	ENSACLG00000021570	fxyd11 (ENSACLG00000021562)	ENSACLG00000021548 #15	ENSACLG00000021515	ENSACLG00000021499	hpn (ENSACLG00000021465)	ENSACLG00000021419 #15	ENSACLG00000021395 #15	SCX (ENSACLG00000021390)	gapdhs (ENSACLG00000021364) #22	ENSACLG00000021355	ENSACLG00000021329	tmem147 (ENSACLG00000021302) #23	sult2st3 (ENSACLG00000020491)	sult2st3 (ENSACLG00000020453)	ENSACLG00000020400	ENSACLG00000020209	ccka (ENSACLG00000020151)	TRAK1 (ENSACLG00000019988)	ENSACLG00000019967	ENSACLG00000019949	ENSACLG00000019941	ctnnb1 (ENSACLG00000019873)	ENSACLG00000019863	ENSACLG00000019850
Zebra mbuna	MODERN SPECIES	1093	ZHX1 (ENSMZEG00005007125)	ATAD2 (ENSMZEG00005007015)	psma2a (ENSMZEG00005006983)	mrpl32 (ENSMZEG00005006966)	ccdc127a (ENSMZEG00005006958)	ENSMZEG00005006953	sdha (ENSMZEG00005006913)	ENSMZEG00005006889	fxyd3 (ENSMZEG00005006868)	fxyd11 (ENSMZEG00005006847)	ENSMZEG00005006821 #15	hpn (ENSMZEG00005006761)	ENSMZEG00005006731	ENSMZEG00005006718 #15	SCX (ENSMZEG00005006710)	gapdhs (ENSMZEG00005006688) #22	STS (ENSMZEG00005006673)	tmem147 (ENSMZEG00005006658) #23	ENSMZEG00005006614	ENSMZEG00005006592	ENSMZEG00005006579	ENSMZEG00005006564	ENSMZEG00005006550	ENSMZEG00005006540	ENSMZEG00005006537	cobl (ENSMZEG00005006497)	GRB10 (ENSMZEG00005006436)	ddc (ENSMZEG00005006385)	entpd3 (ENSMZEG00005006363)	rbms3 (ENSMZEG00005006308)	azi2 (ENSMZEG00005006290)
P. nyererei	MODERN SPECIES	424	ZHX1 (ENSPNYG00000013472)	ATAD2 (ENSPNYG00000013510)	psma2a (ENSPNYG00000013602)	mrpl32 (ENSPNYG00000013630)	ENSPNYG00000013660	ccdc127a (ENSPNYG00000013648)	sdha (ENSPNYG00000013682)	ENSPNYG00000013727	fxyd3 (ENSPNYG00000013760)	ENSPNYG00000013773	ENSPNYG00000013787	ENSPNYG00000013793	hpn (ENSPNYG00000013805)	ENSPNYG00000013867 #15	SCX (ENSPNYG00000013878)	gapdhs (ENSPNYG00000013888) #22
Burton s mouthbrooder	MODERN SPECIES	662	ENSHBUG00000011567	psma2a (ENSHBUG00000011448)	mrpl32 (ENSHBUG00000011435)	ENSHBUG00000011418	ccdc127a (ENSHBUG00000011433)	sdha (ENSHBUG00000011402)	si:dkey-33i11.9 (ENSHBUG00000011337)	ENSHBUG00000011330	ENSHBUG00000011316	ENSHBUG00000011303 #15	ENSHBUG00000011297	hpn (ENSHBUG00000011294)	ENSHBUG00000011288 #15	ENSHBUG00000011270 #15	SCX (ENSHBUG00000011248)	gapdhs (ENSHBUG00000011234) #22	STS (ENSHBUG00000011154)	tmem147 (ENSHBUG00000000293) #23	sult2st3 (ENSHBUG00000011084)	ENSHBUG00000011063	ENSHBUG00000011048	ccka (ENSHBUG00000011016)	TRAK1 (ENSHBUG00000011007)	ENSHBUG00000010962
Lyretail cichlid	MODERN SPECIES	324	ENSNBRG00000009468	ENSNBRG00000009496	ZHX1 (ENSNBRG00000009527)	ATAD2 (ENSNBRG00000009567)	psma2a (ENSNBRG00000009619)	mrpl32 (ENSNBRG00000009648)	ENSNBRG00000009666	ccdc127a (ENSNBRG00000009658)	sdha (ENSNBRG00000009676)	ENSNBRG00000009724	fxyd3 (ENSNBRG00000009736)	ENSNBRG00000009741	hpn (ENSNBRG00000009755)	ENSNBRG00000009761 #15	SCX (ENSNBRG00000009773)	gapdhs (ENSNBRG00000009787) #22	tmem147 (ENSNBRG00000009813) #23	ENSNBRG00000009828	sult2st3 (ENSNBRG00000009852)	ENSNBRG00000010012	ccka (ENSNBRG00000010096)	ENSNBRG00000010142	ENSNBRG00000010161	ctnnb1 (ENSNBRG00000010173)	ENSNBRG00000010217	hint3 (ENSNBRG00000010219)	ENSNBRG00000010229	trmt11 (ENSNBRG00000010249)	rspo3 (ENSNBRG00000010327)	mdh2 (ENSNBRG00000010348)	RNF146 (ENSNBRG00000010361)
Nile tilapia	MODERN SPECIES	2	psma2a (ENSONIG00000007278)	mrpl32 (ENSONIG00000032508)	ENSONIG00000007275	ccdc127 (ENSONIG00000033508)	sdha (ENSONIG00000007272)	ENSONIG00000036924	ENSONIG00000031295	ENSONIG00000011326	ENSONIG00000007271 #15	ENSONIG00000028859 #15	ENSONIG00000027801	hpn (ENSONIG00000007268)	ENSONIG00000007267 #15	ENSONIG00000032686 #15	scx (ENSONIG00000007265)	gapdhs (ENSONIG00000037136) #22	ENSONIG00000038120	tmem147 (ENSONIG00000007257) #23	ENSONIG00000029559	sult2st3 (ENSONIG00000007254)	ENSONIG00000007253	ENSONIG00000030530	ENSONIG00000039433	ENSONIG00000007248	ENSONIG00000041486	ENSONIG00000034808	TRAK1 (ENSONIG00000007240)	ENSONIG00000007230	ctnnb1 (ENSONIG00000007226)	ENSONIG00000031595	ENSONIG00000007223
Midas cichlid	MODERN SPECIES	226	ZHX1 (ENSACIG00000019985)	ENSACIG00000019938	psma2a (ENSACIG00000019925)	mrpl32 (ENSACIG00000019897)	ENSACIG00000019893	ccdc127a (ENSACIG00000019885)	sdha (ENSACIG00000019856)	fxyd3 (ENSACIG00000019842)	ENSACIG00000019829	ENSACIG00000019817	ENSACIG00000019802 #15	hpn (ENSACIG00000019756)	ENSACIG00000019729 #15	ENSACIG00000019708	SCX (ENSACIG00000019696)	gapdhs (ENSACIG00000019678) #22	ENSACIG00000019670	tmem147 (ENSACIG00000019542) #23	sult2st3 (ENSACIG00000019388)	ENSACIG00000019373
Pomacentridae	ANCESTRAL SPECIES	23	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000166706	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	1565															SCX (ENSSPAG00000020757)	gapdhs (ENSSPAG00000020776) #22	tmem147 (ENSSPAG00000020798) #23	sult2st3 (ENSSPAG00000020824)	ENSSPAG00000020839	ENSSPAG00000020880	ccka (ENSSPAG00000021115)
Bicolor damselfish	MODERN SPECIES	843																gapdhs (ENSSPAG00000006590) #22	nme2a (ENSSPAG00000006577)	MBTD1 (ENSSPAG00000006477)	tdrkh (ENSSPAG00000006435)	TMEM94 (ENSSPAG00000006232)	ENSSPAG00000006176	llgl2 (ENSSPAG00000006035)	galk1 (ENSSPAG00000005988)
Pomacentridae_A	ANCESTRAL SPECIES	6	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930.bb	ENSGT00390000003571.h	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b	ENSGT00940000165475
Amphiprion	ANCESTRAL SPECIES	54	ENSGT00390000011435	ENSGT00950000182893.a.a.a.a.b	ENSGT00550000074694.a.k	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00910000144277	ENSGT01100000263583	ENSGT01070000253873	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.b #15	ENSGT01010000222294.c.b.b.a.a.a.b #15	ENSGT00940000159697	ENSGT01010000222294.c.b.b.a.a.b.a.a.f.a #15	ENSGT00940000161897.a	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000177393.B	ENSGT00940000166159	ENSGT00940000166537	ENSGT00940000156930.bb	ENSGT00390000003571.h	ENSGT00960000191652	ENSGT00940000155697.A	ENSGT00940000170917	ENSGT00940000156541	ENSGT00940000155471.d	ENSGT00940000160520	ENSGT00940000164478.b	ENSGT00940000155141.w.b	ENSGT00510000047616.b
Clown anemonefish	MODERN SPECIES	3082																gapdhs (ENSAOCG00000016317) #22	tmem147 (ENSAOCG00000016350) #23	sult2st3 (ENSAOCG00000016370)
Orange clownfish	MODERN SPECIES	21	zgc:101716 (ENSAPEG00000018673)	ZHX1 (ENSAPEG00000018556)	ATAD2 (ENSAPEG00000018408)	psma2a (ENSAPEG00000018372)	mrpl32 (ENSAPEG00000018363)	ENSAPEG00000018353	ccdc127a (ENSAPEG00000018336)	sdha (ENSAPEG00000018278)	fxyd3 (ENSAPEG00000018264)	ENSAPEG00000018254	ENSAPEG00000018236 #15	ENSAPEG00000018213 #15	hpn (ENSAPEG00000018196)	ENSAPEG00000018177 #15	SCX (ENSAPEG00000018162)	gapdhs (ENSAPEG00000018125) #22	tmem147 (ENSAPEG00000018067) #23	ENSAPEG00000018057	sult2st3 (ENSAPEG00000018041)	ENSAPEG00000018021	ENSAPEG00000017932	ccka (ENSAPEG00000017904)	ENSAPEG00000017886	TRAK1 (ENSAPEG00000017811)	ENSAPEG00000017801	ENSAPEG00000017781	ctnnb1 (ENSAPEG00000017688)	ENSAPEG00000017508	ENSAPEG00000017484	ENSAPEG00000017473	hint3 (ENSAPEG00000017427)
Spiny chromis	MODERN SPECIES	1640																gapdhs (ENSAPOG00000015808) #22	tmem147 (ENSAPOG00000015757) #23	sult2st3 (ENSAPOG00000000434)	ENSAPOG00000015712	ENSAPOG00000015701
Osteoglossiformes	ANCESTRAL SPECIES		ENSGT00940000155418.a.b.b	ENSGT00940000160603	ENSGT00940000159510	ENSGT00950000183155.a.b.a.a.a	ENSGT01060000248765	ENSGT00980000198681	ENSGT00940000153695.C	ENSGT00990000205757	ENSGT00980000198998	ENSGT01010000222294.c.b.b.a.a.b.a.b #15	ENSGT00920000149572	ENSGT00940000159697	ENSGT01070000253873	ENSGT01100000263583	ENSGT00940000160297 #24	ENSGT00940000160272 #22	ENSGT00390000013276 #23	ENSGT00940000166159	ENSGT00940000166537	ENSGT00950000183155.a.b.a.b	ENSGT00940000154641.A	ENSGT00940000164813	ENSGT00940000165396.A.a	ENSGT00940000160881 #31	ENSGT00940000165579.a.a.b	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b
Asian bonytongue	MODERN SPECIES	9	ENSSFOG00015031226 ##18	ENSSFOG00015029324 #15	ENSSFOG00015025931 ##18	ENSSFOG00015026419	ENSSFOG00015032163 #15	ENSSFOG00015025299 ##18	ENSSFOG00015028484 #15	ENSSFOG00015018776 #15	ENSSFOG00015018784	hpn (ENSSFOG00015018803)	fxyd11 (ENSSFOG00015018830)	ENSSFOG00015018840	ENSSFOG00015018849	ENSSFOG00015018853	ATP4A (ENSSFOG00015018867) #24	gapdhs (ENSSFOG00015018906) #22	tmem147 (ENSSFOG00015018915) #23	sult2st3 (ENSSFOG00015018931)	ENSSFOG00015033350	ENSSFOG00015018949	ENSSFOG00015018983	ENSSFOG00015018990	ENSSFOG00015019034	ENSSFOG00015025802	ENSSFOG00015028511	ENSSFOG00015005753	rbm42 (ENSSFOG00015019227)	ENSSFOG00015019274	ENSSFOG00015029867	upk1a (ENSSFOG00015019332) #31	ENSSFOG00015019339
P. kingsleyae	MODERN SPECIES	802															ATP4A (ENSPKIG00000020498) #24	gapdhs (ENSPKIG00000020468) #22
Spotted gar	MODERN SPECIES	663	ENSLOCG00000003775	ENSLOCG00000003762 #15	ENSLOCG00000003748 #15	ENSLOCG00000003736 #15	ENSLOCG00000003726	ENSLOCG00000003712	ENSLOCG00000003700 #15	ENSLOCG00000003668	pimr50 (ENSLOCG00000003651)	haus5 (ENSLOCG00000003630)	ENSLOCG00000003618	CNFN (ENSLOCG00000003611)	sult2st3 (ENSLOCG00000003588)	si:ch73-343g19.4 (ENSLOCG00000003572)	ATP4A (ENSLOCG00000003550) #24	gapdhs (ENSLOCG00000003537) #22	tmem147 (ENSLOCG00000003521) #23	ENSLOCG00000003495	ENSLOCG00000003478	ENSLOCG00000003465	hpn (ENSLOCG00000003452)	ENSLOCG00000003436	ENSLOCG00000003417	ENSLOCG00000003392	ENSLOCG00000003379	rbm42 (ENSLOCG00000003368)
Reedfish	MODERN SPECIES	8	ENSECRG00000018071	ENSECRG00000018095	ENSECRG00000018195	ENSECRG00000018318	ENSECRG00000018343	ENSECRG00000018378	ENSECRG00000018402	ENSECRG00000018429	ENSECRG00000018460	ENSECRG00000018511	ENSECRG00000018551	ENSECRG00000018602	hpn (ENSECRG00000018680)	ENSECRG00000018732	ENSECRG00000018768	gapdhs (ENSECRG00000018813) #22	tmem147 (ENSECRG00000018852) #23	ATP4A (ENSECRG00000018976) #24	sult2st3 (ENSECRG00000020099)	ENSECRG00000020129	ENSECRG00000020184	ENSECRG00000020215	ENSECRG00000020242	RBPMS2 (ENSECRG00000020260)	lingo1b (ENSECRG00000020285)	ENSECRG00000020296	snx33 (ENSECRG00000020308)	snupn (ENSECRG00000020330)	TBC1D2B (ENSECRG00000020363)	ENSECRG00000020376	cib2 (ENSECRG00000020386)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000160272 #22
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	367	ENSEBUG00000010768	ENSEBUG00000008715	ENSEBUG00000013868	ENSEBUG00000005091	mfn2 (ENSEBUG00000014863)	alpl (ENSEBUG00000007697)	rbp7b (ENSEBUG00000013450)	ENSEBUG00000002397	ENSEBUG00000004716	ENSEBUG00000009189	ENSEBUG00000016877	ENSEBUG00000009530	ENSEBUG00000002976	ENSEBUG00000010741	gapdh (ENSEBUG00000006892)	ENSEBUG00000010165 #22	ENSEBUG00000015498 #22	ddx19a (ENSEBUG00000001119)	ENSEBUG00000007707	emg1 (ENSEBUG00000008287)	ENSEBUG00000016800	ENSEBUG00000009113	cdk11b (ENSEBUG00000014440)	CHD3 (ENSEBUG00000008310)	ccnl1a (ENSEBUG00000013214)	gabarapa (ENSEBUG00000015205)	ENSEBUG00000011617	cxxc1a (ENSEBUG00000009187)	ENSEBUG00000000539	ENSEBUG00000015889	qrich1 (ENSEBUG00000010518)
Hagfish	MODERN SPECIES	367	ENSEBUG00000008715	ENSEBUG00000013868	ENSEBUG00000005091	mfn2 (ENSEBUG00000014863)	alpl (ENSEBUG00000007697)	rbp7b (ENSEBUG00000013450)	ENSEBUG00000002397	ENSEBUG00000004716	ENSEBUG00000009189	ENSEBUG00000016877	ENSEBUG00000009530	ENSEBUG00000002976	ENSEBUG00000010741	gapdh (ENSEBUG00000006892)	ENSEBUG00000010165 #22	ENSEBUG00000015498 #22	ddx19a (ENSEBUG00000001119)	ENSEBUG00000007707	emg1 (ENSEBUG00000008287)	ENSEBUG00000016800	ENSEBUG00000009113	cdk11b (ENSEBUG00000014440)	CHD3 (ENSEBUG00000008310)	ccnl1a (ENSEBUG00000013214)	gabarapa (ENSEBUG00000015205)	ENSEBUG00000011617	cxxc1a (ENSEBUG00000009187)	ENSEBUG00000000539	ENSEBUG00000015889	qrich1 (ENSEBUG00000010518)	ENSEBUG00000014860