Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT00940000157176 #7	ENSGT00390000017162 #8	ENSGT00940000160296 #9	ENSGT00940000161674 #10	ENSGT00940000161687 #11	ENSGT00390000002931 #12	ENSGT00950000182936.a.b.b #13	ENSGT00950000182850.a.b.b #14	ENSGT00940000161965 #15	ENSGT00940000161418 #16	ENSGT00940000153139.B.a #17	ENSGT00940000159868 #18	ENSGT00940000156168.B #19	ENSGT00940000154078.a.b #20	ENSGT00940000155068.b #21	ENSGT00940000159352 #22	ENSGT00940000157178 #23	ENSGT00390000010950 #24	ENSGT01050000244968.c #25	ENSGT00940000157357 #26	ENSGT00680000101436	ENSGT00940000156591 #28	ENSGT00390000012054.b.ib ##29	ENSGT00390000012054.b.hb.a #30	ENSGT00390000004697 #32	ENSGT00940000160268 #33	ENSGT00940000161766 #34	ENSGT00940000161969 #35	ENSGT00390000004179 #36	ENSGT00940000159346 #37	ENSGT00770000121728
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT00940000157176 #7	ENSGT00390000017162 #8	ENSGT00940000160296 #9	ENSGT00940000161674 #10	ENSGT00940000161687 #11	ENSGT00390000002931 #12	ENSGT00950000182936.a.b.b #13	ENSGT00950000182850.a.b.b #14	ENSGT00940000161965 #15	ENSGT00940000161418 #16	ENSGT00940000153139.B.a #17	ENSGT00940000159868 #18	ENSGT00940000156168.B #19	ENSGT00940000154078.a.b #20	ENSGT00940000155068.b #21	ENSGT00940000159352 #22	ENSGT00940000157178 #23	ENSGT00390000010950 #24	ENSGT01050000244968.c #25	ENSGT00940000157357 #26	ENSGT00940000156591 #28	ENSGT00390000012054.b.hb.b #29	ENSGT00390000012054.b.hb.a #30	ENSGT00390000004697 #32	ENSGT00940000160268 #33	ENSGT00940000161766 #34	ENSGT00940000161969 #35	ENSGT00390000004179 #36	ENSGT00940000159346 #37	ENSGT01100000263802	ENSGT00980000198737
Hystricomorpha_b	ANCESTRAL SPECIES	30	ENSGT00940000157176 #7	ENSGT00390000017162 #8	ENSGT00940000160296 #9	ENSGT00940000161674 #10	ENSGT00940000161687 #11	ENSGT00390000002931 #12	ENSGT00950000182936.a.b.b #13	ENSGT00950000182850.a.b.b #14	ENSGT00940000161965 #15	ENSGT00940000161418 #16	ENSGT00940000153139.B.a #17	ENSGT00940000159868 #18	ENSGT00940000156168.B #19	ENSGT00940000154078.a.b #20	ENSGT00940000155068.b #21	ENSGT00940000159352 #22	ENSGT00940000157178 #23	ENSGT00390000010950 #24	ENSGT01050000244968.c #25	ENSGT00940000157357 #26	ENSGT00940000156591 #28	ENSGT00390000012054.b.hb.b #29	ENSGT00390000012054.b.hb.a #30	ENSGT00390000004697 #32	ENSGT00940000160268 #33	ENSGT00940000161766 #34	ENSGT00940000161969 #35	ENSGT00390000004179 #36	ENSGT00940000159346 #37	ENSGT00980000198737	ENSGT00940000155329.b.a.a
Long-tailed chinchilla	MODERN SPECIES	110	BMP1 (ENSCLAG00000015290) #7	SFTPC (ENSCLAG00000017002) #8	LGI3 (ENSCLAG00000014697) #9	REEP4 (ENSCLAG00000013685) #10	HR (ENSCLAG00000013490) #11	ENSCLAG00000012239 #12	FHIP2B (ENSCLAG00000017275) #13	DMTN (ENSCLAG00000015647) #14	FGF17 (ENSCLAG00000014705) #15	NPM2 (ENSCLAG00000013600) #16	XPO7 (ENSCLAG00000012121) #17	DOK2 (ENSCLAG00000013076) #18	GFRA2 (ENSCLAG00000013860) #19	LZTS1 (ENSCLAG00000015813) #20	ATP6V1B2 (ENSCLAG00000014575) #21	SLC18A1 (ENSCLAG00000014695) #22	LPL (ENSCLAG00000014046) #23	INTS10 (ENSCLAG00000012932) #24	CSGALNACT1 (ENSCLAG00000015214) #25	SH2D4A (ENSCLAG00000014633) #26	ENSCLAG00000013492 #27	PSD3 (ENSCLAG00000013610) #28	ENSCLAG00000013815 #29	ENSCLAG00000015279 #30	ENSCLAG00000017207 #31	NAF1 (ENSCLAG00000017209) #32	NPY1R (ENSCLAG00000015952) #33	NPY5R (ENSCLAG00000015988) #34	TKTL2 (ENSCLAG00000017876) #35	TMA16 (ENSCLAG00000016351) #36	MARCHF1 (ENSCLAG00000014711) #37
Degu	MODERN SPECIES	77	BMP1 (ENSODEG00000007288) #7	SFTPC (ENSODEG00000007026) #8	LGI3 (ENSODEG00000006726) #9	REEP4 (ENSODEG00000006662) #10	HR (ENSODEG00000005767) #11	NUDT18 (ENSODEG00000007621) #12	FHIP2B (ENSODEG00000008184) #13	DMTN (ENSODEG00000005818) #14	FGF17 (ENSODEG00000005311) #15	NPM2 (ENSODEG00000006433) #16	XPO7 (ENSODEG00000007208) #17	ENSODEG00000005626 #18	GFRA2 (ENSODEG00000005386) #19	LZTS1 (ENSODEG00000007484) #20	ENSODEG00000005521 #21	SLC18A1 (ENSODEG00000005261) #22	LPL (ENSODEG00000006165) #23	INTS10 (ENSODEG00000006587) #24	CSGALNACT1 (ENSODEG00000005728) #25	SH2D4A (ENSODEG00000006278) #26	ENSODEG00000006062 #28	ENSODEG00000005985 #28	ENSODEG00000019170 ##29	ENSODEG00000019368 ##29	ENSODEG00000006419	NAF1 (ENSODEG00000006528) #32	NPY1R (ENSODEG00000006377) #33	NPY5R (ENSODEG00000005343) #34	ENSODEG00000007708	TKTL2 (ENSODEG00000019464) #35	ENSODEG00000007438 #36
Guinea pig	MODERN SPECIES	1	BMP1 (ENSCPOG00000019973) #7	SFTPC (ENSCPOG00000021731) #8	LGI3 (ENSCPOG00000037841) #9	REEP4 (ENSCPOG00000003298) #10	HR (ENSCPOG00000003292) #11	NUDT18 (ENSCPOG00000030205) #12	FHIP2B (ENSCPOG00000003287) #13	DMTN (ENSCPOG00000006214) #14	FGF17 (ENSCPOG00000014655) #15	NPM2 (ENSCPOG00000039799) #16	XPO7 (ENSCPOG00000004506) #17	DOK2 (ENSCPOG00000001726) #18	GFRA2 (ENSCPOG00000027454) #19	LZTS1 (ENSCPOG00000034547) #20	ATP6V1B2 (ENSCPOG00000001749) #21	SLC18A1 (ENSCPOG00000001743) #22	LPL (ENSCPOG00000004054) #23	INTS10 (ENSCPOG00000011817) #24	CSGALNACT1 (ENSCPOG00000005259) #25	ENSCPOG00000030817	SH2D4A (ENSCPOG00000005255) #26	ENSCPOG00000037424	PSD3 (ENSCPOG00000002659) #28	ENSCPOG00000019452 #29	ENSCPOG00000035688 #30	ENSCPOG00000009771 #30	NAF1 (ENSCPOG00000010331) #32	NPY1R (ENSCPOG00000031707) #33	Npy5r (ENSCPOG00000011688) #34	TKTL2 (ENSCPOG00000019878) #35	TMA16 (ENSCPOG00000038434) #36
Naked mole-rat female	MODERN SPECIES	25	BMP1 (ENSHGLG00000013962) #7	SFTPC (ENSHGLG00000013617) #8	LGI3 (ENSHGLG00000032024) #9	REEP4 (ENSHGLG00000016443) #10	HR (ENSHGLG00000013891) #11	NUDT18 (ENSHGLG00000009076) #12	FHIP2B (ENSHGLG00000012251) #13	DMTN (ENSHGLG00000007946) #14	FGF17 (ENSHGLG00000007312) #15	NPM2 (ENSHGLG00000006243) #16	XPO7 (ENSHGLG00000008763) #17	DOK2 (ENSHGLG00000015292) #18	GFRA2 (ENSHGLG00000015954) #19	ENSHGLG00000048578	ATP6V1B2 (ENSHGLG00000007965) #21	SLC18A1 (ENSHGLG00000007001) #22	LPL (ENSHGLG00000005162) #23	INTS10 (ENSHGLG00000015823) #24	CSGALNACT1 (ENSHGLG00000016296) #25	SH2D4A (ENSHGLG00000017844) #26	ENSHGLG00000010280	ENSHGLG00000005452 #28	ENSHGLG00000039432 #28	ENSHGLG00000044555	ENSHGLG00000041096 #29	ENSHGLG00000044170	ENSHGLG00000015180	ENSHGLG00000014899 #32	ENSHGLG00000015330	NPY1R (ENSHGLG00000039833) #33	NPY5R (ENSHGLG00000017420) #34