Euteleostomi	ANCESTRAL SPECIES	185							ENSGT01010000222313.A.b.a.c	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157700 #26	ENSGT00940000158116 #29	ENSGT00390000012078.a.b #32	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33	ENSGT00950000185200	ENSGT00940000160389	ENSGT00510000047770.c.a
Sarcopterygii	ANCESTRAL SPECIES	189							ENSGT01010000222313.A.b.a.c	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157700 #26	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000012078.a.b #32	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000166140
Tetrapoda	ANCESTRAL SPECIES	8	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b #37	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00940000164623.C	ENSGT00940000164108.a	ENSGT00390000002634.a #27	ENSGT00940000155705.b	ENSGT00940000156259.b	ENSGT00940000158851	ENSGT00530000063632.A	ENSGT00530000063790.a	ENSGT00940000156897	ENSGT00390000015908	ENSGT00390000003860
Amniota	ANCESTRAL SPECIES	31	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b #37	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00940000164623.C	ENSGT00940000164108.a	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33
Mammalia	ANCESTRAL SPECIES	42	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36	ENSGT00530000063646.b #37
Theria	ANCESTRAL SPECIES	29	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Eutheria	ANCESTRAL SPECIES	27	ENSGT00390000005147	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Primates	ANCESTRAL SPECIES	18	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Catarrhini	ANCESTRAL SPECIES		ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Macaca	ANCESTRAL SPECIES	21	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00950000182755.b.a.a.b.b.a.a.b.a.a.b.a.b #7	ENSGT00940000164096	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.b.a.b.a.a #9	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b.b.b #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36	ENSGT00530000063646.b.v.a #37
Rhesus	MODERN SPECIES	10	ZNF44 (ENSMMUG00000049646) #7	ZNF709 (ENSMMUG00000005236) #8	ENSMMUG00000054313 #9	ENSMMUG00000058614 #10	ZNF490 (ENSMMUG00000016860) #11	ZNF791 (ENSMMUG00000016862) #12	WDR83OS (ENSMMUG00000016863) #13	WDR83 (ENSMMUG00000016868) #14	DHPS (ENSMMUG00000016869) #15	FBXW9 (ENSMMUG00000016870) #16	TNPO2 (ENSMMUG00000005684) #17	TRIR (ENSMMUG00000006274) #18	GET3 (ENSMMUG00000006275) #19	BEST2 (ENSMMUG00000063236) #20	HOOK2 (ENSMMUG00000005686) #21	JUNB (ENSMMUG00000005688) #22	PRDX2 (ENSMMUG00000005689) #23	RNASEH2A (ENSMMUG00000045010) #24	RTBDN (ENSMMUG00000007322) #25	MAST1 (ENSMMUG00000008740) #26	DNASE2 (ENSMMUG00000028866) #27	KLF1 (ENSMMUG00000011230) #28	GCDH (ENSMMUG00000007043) #29	FARSA (ENSMMUG00000004390) #30	CALR (ENSMMUG00000004392) #31	RAD23A (ENSMMUG00000004393) #32	GADD45GIP1 (ENSMMUG00000042251) #33	DAND5 (ENSMMUG00000063314) #34	NFIX (ENSMMUG00000019292) #35	LYL1 (ENSMMUG00000001166) #36	TRMT1 (ENSMMUG00000001167) #37
Crab-eating macaque	MODERN SPECIES	10	ZNF878 (ENSMFAG00000003518) ##12	ENSMFAG00000061729	ZNF136 (ENSMFAG00000042768)	ENSMFAG00000063908 ##12	ENSMFAG00000032338	ENSMFAG00000064789 ##12	ZNF44 (ENSMFAG00000043810) #7	ENSMFAG00000001303	ENSMFAG00000034105 #8	ZNF799 (ENSMFAG00000020521) ##12	ENSMFAG00000061912 #9	ZNF490 (ENSMFAG00000031592) #11	ENSMFAG00000049717	ZNF791 (ENSMFAG00000036181) #12	MAN2B1 (ENSMFAG00000042986) #13	ENSMFAG00000052456 #22	ENSMFAG00000031614 ##23	RNASEH2A (ENSMFAG00000002011) #24	RTBDN (ENSMFAG00000038313) #25	MAST1 (ENSMFAG00000041128) #26	DNASE2 (ENSMFAG00000003665) #27	KLF1 (ENSMFAG00000044883) #28	GCDH (ENSMFAG00000003761) #29	FARSA (ENSMFAG00000030595) #30	CALR (ENSMFAG00000040740) #31	RAD23A (ENSMFAG00000003404) #32	GADD45GIP1 (ENSMFAG00000048260) #33	DAND5 (ENSMFAG00000033697) #34	NFIX (ENSMFAG00000038849) #35	LYL1 (ENSMFAG00000032986) #36	TRMT1 (ENSMFAG00000033143) #37
Pig-tailed macaque	MODERN SPECIES	76	ZNF709 (ENSMNEG00000030534) #8	ZNF564 (ENSMNEG00000045548)	ZNF490 (ENSMNEG00000045546) #11	ZNF791 (ENSMNEG00000045545) #12	MAN2B1 (ENSMNEG00000045549) #13	WDR83OS (ENSMNEG00000045544)	WDR83 (ENSMNEG00000045547) #14	DHPS (ENSMNEG00000044271) #15	ENSMNEG00000042372	FBXW9 (ENSMNEG00000039654) #16	TNPO2 (ENSMNEG00000041024) #17	TRIR (ENSMNEG00000007751) #18	GET3 (ENSMNEG00000028577) #19	BEST2 (ENSMNEG00000043730) #20	HOOK2 (ENSMNEG00000006128) #21	JUNB (ENSMNEG00000006142) #22	PRDX2 (ENSMNEG00000042230) #23	RNASEH2A (ENSMNEG00000033054) #24	RTBDN (ENSMNEG00000031687) #25	MAST1 (ENSMNEG00000038625) #26	DNASE2 (ENSMNEG00000038975) #27	KLF1 (ENSMNEG00000030783) #28	GCDH (ENSMNEG00000035137) #29	SYCE2 (ENSMNEG00000032767)	FARSA (ENSMNEG00000043866) #30	CALR (ENSMNEG00000034740) #31	RAD23A (ENSMNEG00000042153) #32	GADD45GIP1 (ENSMNEG00000033121) #33	DAND5 (ENSMNEG00000040891) #34	NFIX (ENSMNEG00000032823) #35	LYL1 (ENSMNEG00000013370) #36
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Sooty mangabey	MODERN SPECIES	347	ZNF564 (ENSCATG00000032013)	ENSCATG00000020970	ZNF490 (ENSCATG00000029197) #11	ZNF791 (ENSCATG00000041735) #12	MAN2B1 (ENSCATG00000042104) #13	WDR83OS (ENSCATG00000036611)	WDR83 (ENSCATG00000035388) #14	ENSCATG00000037007 #15	ENSCATG00000036205	FBXW9 (ENSCATG00000036324) #16	TNPO2 (ENSCATG00000042599) #17	TRIR (ENSCATG00000041032) #18	GET3 (ENSCATG00000010766) #19	BEST2 (ENSCATG00000018527) #20	HOOK2 (ENSCATG00000035441) #21	JUNB (ENSCATG00000021976) #22	PRDX2 (ENSCATG00000030663) #23	RNASEH2A (ENSCATG00000029609) #24	RTBDN (ENSCATG00000043279) #25	MAST1 (ENSCATG00000034930) #26	DNASE2 (ENSCATG00000039766) #27	KLF1 (ENSCATG00000043665) #28	GCDH (ENSCATG00000027594) #29	SYCE2 (ENSCATG00000041610)	ENSCATG00000024201 #30	CALR (ENSCATG00000033446) #31	RAD23A (ENSCATG00000004423) #32	GADD45GIP1 (ENSCATG00000030476) #33	DAND5 (ENSCATG00000043902) #34	NFIX (ENSCATG00000043066) #35	LYL1 (ENSCATG00000044487) #36
Drill	MODERN SPECIES	1150					ZNF791 (ENSMLEG00000034449) #12	MAN2B1 (ENSMLEG00000033102) #13	WDR83OS (ENSMLEG00000030207)	WDR83 (ENSMLEG00000006025) #14	DHPS (ENSMLEG00000039380) #15	ENSMLEG00000028807	FBXW9 (ENSMLEG00000036977) #16	TNPO2 (ENSMLEG00000018391) #17	GET3 (ENSMLEG00000042440) #19	BEST2 (ENSMLEG00000036400) #20	HOOK2 (ENSMLEG00000042169) #21	JUNB (ENSMLEG00000002218) #22	PRDX2 (ENSMLEG00000007227) #23	THSD8 (ENSMLEG00000031315)	RNASEH2A (ENSMLEG00000043654) #24	RTBDN (ENSMLEG00000029058) #25	ENSMLEG00000014873 #26	DNASE2 (ENSMLEG00000042329) #27	KLF1 (ENSMLEG00000029486) #28	ENSMLEG00000022275	GCDH (ENSMLEG00000034975) #29	SYCE2 (ENSMLEG00000040081)	FARSA (ENSMLEG00000029157) #30	CALR (ENSMLEG00000043015) #31	RAD23A (ENSMLEG00000025874) #32	GADD45GIP1 (ENSMLEG00000026252) #33	DAND5 (ENSMLEG00000039027) #34
Olive baboon	MODERN SPECIES	12	ZNF44 (ENSPANG00000047426) #7	ENSPANG00000042135	ZNF709 (ENSPANG00000034349) #8	ZNF490 (ENSPANG00000002672) #11	ZNF791 (ENSPANG00000005118) #12	MAN2B1 (ENSPANG00000017977) #13	WDR83OS (ENSPANG00000038509)	WDR83 (ENSPANG00000010733) #14	DHPS (ENSPANG00000011701) #15	FBXW9 (ENSPANG00000050930) #16	TNPO2 (ENSPANG00000016857) #17	TRIR (ENSPANG00000004448) #18	GET3 (ENSPANG00000017713) #19	BEST2 (ENSPANG00000022682) #20	HOOK2 (ENSPANG00000014672) #21	JUNB (ENSPANG00000018727) #22	PRDX2 (ENSPANG00000010732) #23	THSD8 (ENSPANG00000032212)	RNASEH2A (ENSPANG00000034495) #24	RTBDN (ENSPANG00000015629) #25	MAST1 (ENSPANG00000015630) #26	DNASE2 (ENSPANG00000049574) #27	KLF1 (ENSPANG00000033071) #28	GCDH (ENSPANG00000007728) #29	SYCE2 (ENSPANG00000001632)	FARSA (ENSPANG00000010978) #30	CALR (ENSPANG00000005597) #31	RAD23A (ENSPANG00000014671) #32	GADD45GIP1 (ENSPANG00000009045) #33	NFIX (ENSPANG00000018992) #35	LYL1 (ENSPANG00000014670) #36
Vervet Monkey	MODERN SPECIES	25	ZNF709 (ENSCSAG00000006661) #8	ZNF564 (ENSCSAG00000006658)	ENSCSAG00000006650	ZNF490 (ENSCSAG00000006639) #11	ZNF791 (ENSCSAG00000006632) #12	MAN2B1 (ENSCSAG00000006628) #13	WDR83OS (ENSCSAG00000006616)	WDR83 (ENSCSAG00000006611) #14	DHPS (ENSCSAG00000006608) #15	FBXW9 (ENSCSAG00000006605) #16	TNPO2 (ENSCSAG00000006597) #17	TRIR (ENSCSAG00000006588) #18	GET3 (ENSCSAG00000006585) #19	BEST2 (ENSCSAG00000006582) #20	HOOK2 (ENSCSAG00000006578) #21	JUNB (ENSCSAG00000018838) #22	PRDX2 (ENSCSAG00000006571) #23	RNASEH2A (ENSCSAG00000006567) #24	RTBDN (ENSCSAG00000006564) #25	MAST1 (ENSCSAG00000006558) #26	DNASE2 (ENSCSAG00000006550) #27	KLF1 (ENSCSAG00000006545) #28	GCDH (ENSCSAG00000006539) #29	SYCE2 (ENSCSAG00000006533)	FARSA (ENSCSAG00000006530) #30	CALR (ENSCSAG00000006527) #31	RAD23A (ENSCSAG00000006523) #32	GADD45GIP1 (ENSCSAG00000006518) #33	DAND5 (ENSCSAG00000006514) #34	NFIX (ENSCSAG00000006510) #35	LYL1 (ENSCSAG00000006504) #36
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00950000182755.b.a.a.b.b.a.a.b.a.a.a.a ##12	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Golden snub-nosed monkey	MODERN SPECIES	975	ZNF799 (ENSRROG00000029631) ##12	ZNF564 (ENSRROG00000026298)	ZNF490 (ENSRROG00000039939) #11	ZNF791 (ENSRROG00000031644) #12	MAN2B1 (ENSRROG00000039902) #13	WDR83OS (ENSRROG00000035299)	WDR83 (ENSRROG00000017599) #14	DHPS (ENSRROG00000040289) #15	ENSRROG00000041417	FBXW9 (ENSRROG00000041458) #16	TNPO2 (ENSRROG00000040402) #17	TRIR (ENSRROG00000042115) #18	GET3 (ENSRROG00000034020) #19	BEST2 (ENSRROG00000036441) #20	HOOK2 (ENSRROG00000026930) #21	JUNB (ENSRROG00000025586) #22	PRDX2 (ENSRROG00000035034) #23	THSD8 (ENSRROG00000036021)	RNASEH2A (ENSRROG00000043799) #24	RTBDN (ENSRROG00000035994) #25	MAST1 (ENSRROG00000042288) #26	DNASE2 (ENSRROG00000029927) #27	KLF1 (ENSRROG00000041432) #28	GCDH (ENSRROG00000044762) #29	SYCE2 (ENSRROG00000032909)	FARSA (ENSRROG00000040046) #30	CALR (ENSRROG00000044583) #31	RAD23A (ENSRROG00000040220) #32	GADD45GIP1 (ENSRROG00000032590) #33	DAND5 (ENSRROG00000032903) #34	NFIX (ENSRROG00000033828) #35
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000164420	ENSGT00390000008820.e.b.a.a.b	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000266406	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Hominidae	ANCESTRAL SPECIES		ENSGT00940000164420	ENSGT00390000008820.e.b.a.a.b	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000266406	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000164420	ENSGT00390000008820.e.b.a.a.b	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000266406	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000164420	ENSGT00390000008820.e.b.a.a.b	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000266406	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Pan	ANCESTRAL SPECIES	14	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00390000008820.e.b.a.a.b	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00900000143204.b	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34
Bonobo	MODERN SPECIES	10	ZNF564 (ENSPPAG00000044039)	ENSPPAG00000035947	ZNF490 (ENSPPAG00000030672) #11	ENSPPAG00000042840 ##12	MAN2B1 (ENSPPAG00000031820) #13	WDR83OS (ENSPPAG00000014278)	WDR83 (ENSPPAG00000038802) #14	DHPS (ENSPPAG00000022756) #15	FBXW9 (ENSPPAG00000028530) #16	TNPO2 (ENSPPAG00000019494) #17	ENSPPAG00000014576	TRIR (ENSPPAG00000023372) #18	GET3 (ENSPPAG00000042483) #19	BEST2 (ENSPPAG00000036993) #20	HOOK2 (ENSPPAG00000008477) #21	JUNB (ENSPPAG00000024799) #22	PRDX2 (ENSPPAG00000034246) #23	THSD8 (ENSPPAG00000028013)	RNASEH2A (ENSPPAG00000028092) #24	RTBDN (ENSPPAG00000025282) #25	MAST1 (ENSPPAG00000035621) #26	DNASE2 (ENSPPAG00000034169) #27	KLF1 (ENSPPAG00000039322) #28	GCDH (ENSPPAG00000026417) #29	ENSPPAG00000027273	SYCE2 (ENSPPAG00000028078)	FARSA (ENSPPAG00000034266) #30	CALR (ENSPPAG00000006666) #31	RAD23A (ENSPPAG00000016916) #32	GADD45GIP1 (ENSPPAG00000039356) #33	NFIX (ENSPPAG00000027719) #35
Chimpanzee	MODERN SPECIES	10	ENSPTRG00000041487	ZNF564 (ENSPTRG00000023641)	ENSPTRG00000051618	ZNF490 (ENSPTRG00000049030) #11	ZNF791 (ENSPTRG00000010521) #12	MAN2B1 (ENSPTRG00000010530) #13	WDR83OS (ENSPTRG00000010531)	WDR83 (ENSPTRG00000010532) #14	DHPS (ENSPTRG00000010533) #15	FBXW9 (ENSPTRG00000010534) #16	TNPO2 (ENSPTRG00000010535) #17	TRIR (ENSPTRG00000010536) #18	GET3 (ENSPTRG00000010537) #19	BEST2 (ENSPTRG00000010538) #20	HOOK2 (ENSPTRG00000010539) #21	JUNB (ENSPTRG00000029110) #22	PRDX2 (ENSPTRG00000010541) #23	THSD8 (ENSPTRG00000049528)	RNASEH2A (ENSPTRG00000010542) #24	RTBDN (ENSPTRG00000010543) #25	MAST1 (ENSPTRG00000010545) #26	DNASE2 (ENSPTRG00000010546) #27	KLF1 (ENSPTRG00000010547) #28	GCDH (ENSPTRG00000010548) #29	ENSPTRG00000050317	SYCE2 (ENSPTRG00000010549)	FARSA (ENSPTRG00000010550) #30	CALR (ENSPTRG00000010551) #31	RAD23A (ENSPTRG00000010552) #32	GADD45GIP1 (ENSPTRG00000010553) #33	DAND5 (ENSPTRG00000010554) #34
Human	MODERN SPECIES	10	ZNF564 (ENSG00000249709)	ZNF490 (ENSG00000188033) #11	ZNF791 (ENSG00000173875) #12	MAN2B1 (ENSG00000104774) #13	ENSG00000269590	WDR83 (ENSG00000123154) #14	WDR83OS (ENSG00000105583)	DHPS (ENSG00000095059) #15	GNG14 (ENSG00000283980)	FBXW9 (ENSG00000132004) #16	TNPO2 (ENSG00000105576) #17	TRIR (ENSG00000123144) #18	GET3 (ENSG00000198356) #19	BEST2 (ENSG00000039987) #20	HOOK2 (ENSG00000095066) #21	JUNB (ENSG00000171223) #22	PRDX2 (ENSG00000167815) #23	THSD8 (ENSG00000284491)	RNASEH2A (ENSG00000104889) #24	RTBDN (ENSG00000132026) #25	MAST1 (ENSG00000105613) #26	DNASE2 (ENSG00000105612) #27	KLF1 (ENSG00000105610) #28	GCDH (ENSG00000105607) #29	SYCE2 (ENSG00000161860)	FARSA (ENSG00000179115) #30	CALR (ENSG00000179218) #31	RAD23A (ENSG00000179262) #32	GADD45GIP1 (ENSG00000179271) #33	DAND5 (ENSG00000179284) #34	NFIX (ENSG00000008441) #35
Gorilla	MODERN SPECIES	10	ZNF564 (ENSGGOG00000042091)	ENSGGOG00000039550	ZNF490 (ENSGGOG00000044086) #11	ZNF791 (ENSGGOG00000000606) #12	ENSGGOG00000043721	MAN2B1 (ENSGGOG00000013365) #13	WDR83 (ENSGGOG00000013383) #14	WDR83OS (ENSGGOG00000013381)	DHPS (ENSGGOG00000013390) #15	FBXW9 (ENSGGOG00000013425) #16	ENSGGOG00000013442 #17	TRIR (ENSGGOG00000005540) #18	ASNA1 (ENSGGOG00000005545) #19	BEST2 (ENSGGOG00000005549) #20	HOOK2 (ENSGGOG00000005558) #21	JUNB (ENSGGOG00000005566) #22	PRDX2 (ENSGGOG00000025089) #23	THSD8 (ENSGGOG00000037364)	RNASEH2A (ENSGGOG00000005846) #24	RTBDN (ENSGGOG00000001903) #25	MAST1 (ENSGGOG00000003390) #26	DNASE2 (ENSGGOG00000003402) #27	KLF1 (ENSGGOG00000003408) #28	GCDH (ENSGGOG00000003411) #29	ENSGGOG00000003416	FARSA (ENSGGOG00000003418) #30	CALR (ENSGGOG00000016129) #31	RAD23A (ENSGGOG00000023403) #32	GADD45GIP1 (ENSGGOG00000022807) #33	DAND5 (ENSGGOG00000009692) #34	NFIX (ENSGGOG00000001831) #35
Orangutan	MODERN SPECIES	10	ENSPPYG00000038380 #7	ZNF443 (ENSPPYG00000009595) ##12	ENSPPYG00000041131	ZNF490 (ENSPPYG00000029467) #11	ZNF791 (ENSPPYG00000009596) #12	MAN2B1 (ENSPPYG00000009597) #13	WDR83OS (ENSPPYG00000009598)	WDR83 (ENSPPYG00000009599) #14	DHPS (ENSPPYG00000009600) #15	FBXW9 (ENSPPYG00000009601) #16	TNPO2 (ENSPPYG00000009602) #17	TRIR (ENSPPYG00000009603) #18	GET3 (ENSPPYG00000009604) #19	BEST2 (ENSPPYG00000009605) #20	HOOK2 (ENSPPYG00000009606) #21	JUNB (ENSPPYG00000034415) #22	PRDX2 (ENSPPYG00000009607) #23	THSD8 (ENSPPYG00000035108)	RNASEH2A (ENSPPYG00000009608) #24	ENSPPYG00000009609 #25	MAST1 (ENSPPYG00000009610) #26	DNASE2 (ENSPPYG00000009611) #27	KLF1 (ENSPPYG00000009612) #28	GCDH (ENSPPYG00000009613) #29	FARSA (ENSPPYG00000009615) #30	CALR (ENSPPYG00000009616) #31	RAD23A (ENSPPYG00000009617) #32	GADD45GIP1 (ENSPPYG00000038376) #33	DAND5 (ENSPPYG00000009619) #34	ENSPPYG00000009620 #35	LYL1 (ENSPPYG00000009621) #36
Gibbon	MODERN SPECIES		ZNF563 (ENSNLEG00000035842) ##12	ZNF799 (ENSNLEG00000034475) ##12	ZNF443 (ENSNLEG00000026561) ##12	ZNF709 (ENSNLEG00000036256) #8	ZNF564 (ENSNLEG00000012688)	ZNF490 (ENSNLEG00000012691) #11	ZNF791 (ENSNLEG00000012694) #12	MAN2B1 (ENSNLEG00000012695) #13	WDR83OS (ENSNLEG00000012705)	WDR83 (ENSNLEG00000012710) #14	DHPS (ENSNLEG00000012722) #15	FBXW9 (ENSNLEG00000012752) #16	TNPO2 (ENSNLEG00000012758) #17	TRIR (ENSNLEG00000033688) #18	ENSNLEG00000012793 #21	JUNB (ENSNLEG00000012796) #22	PRDX2 (ENSNLEG00000012800) #23	RNASEH2A (ENSNLEG00000012806) #24	ENSNLEG00000012830 #25	MAST1 (ENSNLEG00000012834) #26	DNASE2 (ENSNLEG00000012861) #27	KLF1 (ENSNLEG00000012868) #28	ENSNLEG00000029024	GCDH (ENSNLEG00000012871) #29	ENSNLEG00000034095	FARSA (ENSNLEG00000012899) #30	ENSNLEG00000012957	CALR (ENSNLEG00000012958) #31	RAD23A (ENSNLEG00000012969) #32	GADD45GIP1 (ENSNLEG00000012973) #33	DAND5 (ENSNLEG00000012978) #34
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121.k	ENSGT00390000002121.l	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Cebidae	ANCESTRAL SPECIES	20	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121.k	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121.k	ENSGT00390000002121.l	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.o.b #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Bolivian squirrel monkey	MODERN SPECIES	192	ENSSBOG00000030106	ZNF564 (ENSSBOG00000025431)	ZNF490 (ENSSBOG00000035661) #11	ZNF791 (ENSSBOG00000024486) #12	MAN2B1 (ENSSBOG00000025631) #13	WDR83OS (ENSSBOG00000029116)	WDR83 (ENSSBOG00000030461) #14	DHPS (ENSSBOG00000033113) #15	ENSSBOG00000029032	FBXW9 (ENSSBOG00000029356) #16	TNPO2 (ENSSBOG00000019551) #17	TRIR (ENSSBOG00000032465) #18	GET3 (ENSSBOG00000034152) #19	BEST2 (ENSSBOG00000025207) #20	HOOK2 (ENSSBOG00000025848) #21	JUNB (ENSSBOG00000019470) #22	PRDX2 (ENSSBOG00000034677) #23	THSD8 (ENSSBOG00000036213)	RNASEH2A (ENSSBOG00000033164) #24	RTBDN (ENSSBOG00000023703) #25	MAST1 (ENSSBOG00000020496) #26	DNASE2 (ENSSBOG00000011199) #27	KLF1 (ENSSBOG00000034347) #28	GCDH (ENSSBOG00000021506) #29	SYCE2 (ENSSBOG00000022841)	FARSA (ENSSBOG00000031362) #30	CALR (ENSSBOG00000019002) #31	RAD23A (ENSSBOG00000023231) #32	GADD45GIP1 (ENSSBOG00000022567) #33	DAND5 (ENSSBOG00000027807) #34	NFIX (ENSSBOG00000036002) #35
Capuchin	MODERN SPECIES	234	ZNF709 (ENSCCAG00000030454) #8	ZNF564 (ENSCCAG00000027400)	ZNF490 (ENSCCAG00000026766) #11	ZNF791 (ENSCCAG00000027336) #12	MAN2B1 (ENSCCAG00000032165) #13	WDR83OS (ENSCCAG00000027678)	WDR83 (ENSCCAG00000034478) #14	DHPS (ENSCCAG00000020342) #15	ENSCCAG00000022190	FBXW9 (ENSCCAG00000027128) #16	TNPO2 (ENSCCAG00000024574) #17	TRIR (ENSCCAG00000034041) #18	ASNA1 (ENSCCAG00000036628) #19	BEST2 (ENSCCAG00000028789) #20	HOOK2 (ENSCCAG00000001971) #21	JUNB (ENSCCAG00000020250) #22	PRDX2 (ENSCCAG00000013200) #23	THSD8 (ENSCCAG00000030346)	RNASEH2A (ENSCCAG00000030453) #24	RTBDN (ENSCCAG00000023878) #25	MAST1 (ENSCCAG00000036093) #26	ENSCCAG00000035903 #27	KLF1 (ENSCCAG00000022356) #28	GCDH (ENSCCAG00000027806) #29	SYCE2 (ENSCCAG00000033990)	FARSA (ENSCCAG00000028176) #30	CALR (ENSCCAG00000000456) #31	RAD23A (ENSCCAG00000030313) #32	GADD45GIP1 (ENSCCAG00000036734) #33	DAND5 (ENSCCAG00000018636) #34	NFIX (ENSCCAG00000022096) #35
Marmoset	MODERN SPECIES	14	ENSCJAG00000041226 ##12	ZNF709 (ENSCJAG00000005418) #8	ZNF564 (ENSCJAG00000045776)	ZNF490 (ENSCJAG00000005408) #11	ZNF791 (ENSCJAG00000080833) #12	MAN2B1 (ENSCJAG00000005297) #13	ENSCJAG00000038528	WDR83 (ENSCJAG00000005272) #14	DHPS (ENSCJAG00000005244) #15	ENSCJAG00000045360	FBXW9 (ENSCJAG00000005225) #16	TNPO2 (ENSCJAG00000005096) #17	TRIR (ENSCJAG00000005083) #18	ENSCJAG00000084405	HOOK2 (ENSCJAG00000004942) #21	JUNB (ENSCJAG00000078765) #22	PRDX2 (ENSCJAG00000004882) #23	RNASEH2A (ENSCJAG00000004873) #24	RTBDN (ENSCJAG00000004863) #25	MAST1 (ENSCJAG00000004772) #26	DNASE2 (ENSCJAG00000004764) #27	KLF1 (ENSCJAG00000004762) #28	GCDH (ENSCJAG00000004741) #29	SYCE2 (ENSCJAG00000004733)	FARSA (ENSCJAG00000004686) #30	CALR (ENSCJAG00000004650) #31	ENSCJAG00000004494 #32	GADD45GIP1 (ENSCJAG00000004645) #33	DAND5 (ENSCJAG00000004639) #34	NFIX (ENSCJAG00000004603) #35	LYL1 (ENSCJAG00000004598) #36
Mas night monkey	MODERN SPECIES	937	ZNF442 (ENSANAG00000035501) ##12	ENSANAG00000033613 ##12	ZNF709 (ENSANAG00000036940) #8	ZNF564 (ENSANAG00000036392)	ZNF490 (ENSANAG00000035599) #11	ZNF791 (ENSANAG00000035071) #12	MAN2B1 (ENSANAG00000037791) #13	DHPS (ENSANAG00000035528) #15	ENSANAG00000033935	FBXW9 (ENSANAG00000033814) #16	TNPO2 (ENSANAG00000036645) #17	TRIR (ENSANAG00000036223) #18	GET3 (ENSANAG00000037482) #19	BEST2 (ENSANAG00000037461) #20	HOOK2 (ENSANAG00000003110) #21	JUNB (ENSANAG00000018377) #22	PRDX2 (ENSANAG00000026462) #23	THSD8 (ENSANAG00000035604)	RNASEH2A (ENSANAG00000037932) #24	RTBDN (ENSANAG00000037449) #25	MAST1 (ENSANAG00000020839) #26	DNASE2 (ENSANAG00000021770) #27	GCDH (ENSANAG00000036490) #29	KLF1 (ENSANAG00000036457) #28	SYCE2 (ENSANAG00000036720)	FARSA (ENSANAG00000037420) #30	CALR (ENSANAG00000021327) #31	RAD23A (ENSANAG00000037597) #32	GADD45GIP1 (ENSANAG00000021876) #33	DAND5 (ENSANAG00000022153) #34	NFIX (ENSANAG00000009093) #35
Tarsier	MODERN SPECIES	2328															ENSTSYG00000029228	JUNB (ENSTSYG00000033881) #22	PRDX2 (ENSTSYG00000028395) #23
Strepsirrhini	ANCESTRAL SPECIES	28	ENSGT00950000182755.b.a.a.a.a.a.a.b.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Lemuriformes	ANCESTRAL SPECIES	35	ENSGT00950000182755.b.a.a.a.a.a.a.b.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Lemuriformes_a	ANCESTRAL SPECIES	25	ENSGT00950000182755.b.a.a.a.a.a.a.b.b #8	ENSGT00940000164420	ENSGT00940000164491 #11	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Coquerels sifaka	MODERN SPECIES	226	ZNF709 (ENSPCOG00000017064) #8	ZNF564 (ENSPCOG00000027864)	ZNF490 (ENSPCOG00000008287) #11	ZNF791 (ENSPCOG00000015720) #12	MAN2B1 (ENSPCOG00000018811) #13	WDR83OS (ENSPCOG00000024280)	WDR83 (ENSPCOG00000019048) #14	DHPS (ENSPCOG00000028759) #15	ENSPCOG00000028753	FBXW9 (ENSPCOG00000024449) #16	TNPO2 (ENSPCOG00000018386) #17	TRIR (ENSPCOG00000027525) #18	GET3 (ENSPCOG00000027722) #19	BEST2 (ENSPCOG00000025129) #20	HOOK2 (ENSPCOG00000027579) #21	JUNB (ENSPCOG00000013392) #22	PRDX2 (ENSPCOG00000023441) #23	THSD8 (ENSPCOG00000027163)	RNASEH2A (ENSPCOG00000003686) #24	RTBDN (ENSPCOG00000019035) #25	MAST1 (ENSPCOG00000010146) #26	DNASE2 (ENSPCOG00000018438) #27	KLF1 (ENSPCOG00000024775) #28	GCDH (ENSPCOG00000027495) #29	SYCE2 (ENSPCOG00000023390)	FARSA (ENSPCOG00000014412) #30	CALR (ENSPCOG00000027189) #31	RAD23A (ENSPCOG00000023819) #32	GADD45GIP1 (ENSPCOG00000008740) #33	DAND5 (ENSPCOG00000014620) #34	NFIX (ENSPCOG00000015718) #35
Greater bamboo lemur	MODERN SPECIES	1721												TRIR (ENSPSMG00000009264) #18	GET3 (ENSPSMG00000009313) #19	BEST2 (ENSPSMG00000009334) #20	HOOK2 (ENSPSMG00000009406) #21	JUNB (ENSPSMG00000009464) #22
Mouse lemur	MODERN SPECIES	16	ZNF709 (ENSMICG00000041711) #8	ZNF564 (ENSMICG00000031514)	ENSMICG00000027449 #8	ZNF791 (ENSMICG00000001543) #12	MAN2B1 (ENSMICG00000030973) #13	WDR83OS (ENSMICG00000041694)	WDR83 (ENSMICG00000045845) #14	DHPS (ENSMICG00000005368) #15	ENSMICG00000042997	FBXW9 (ENSMICG00000016149) #16	TNPO2 (ENSMICG00000016153) #17	TRIR (ENSMICG00000027484) #18	GET3 (ENSMICG00000016170) #19	BEST2 (ENSMICG00000037638) #20	HOOK2 (ENSMICG00000016176) #21	JUNB (ENSMICG00000027217) #22	PRDX2 (ENSMICG00000016211) #23	RNASEH2A (ENSMICG00000016430) #24	RTBDN (ENSMICG00000028676) #25	MAST1 (ENSMICG00000016221) #26	ENSMICG00000016255 #27	KLF1 (ENSMICG00000016260) #28	SYCE2 (ENSMICG00000016268)	GCDH (ENSMICG00000016264) #29	FARSA (ENSMICG00000016272) #30	CALR (ENSMICG00000016284) #31	RAD23A (ENSMICG00000016290) #32	GADD45GIP1 (ENSMICG00000038609) #33	DAND5 (ENSMICG00000046835) #34	NFIX (ENSMICG00000000785) #35	LYL1 (ENSMICG00000045046) #36
Bushbaby	MODERN SPECIES	242	ENSOGAG00000014973 ##12	ENSOGAG00000032701	ZNF564 (ENSOGAG00000004779)	ENSOGAG00000005003 #8	ZNF791 (ENSOGAG00000015391) #12	MAN2B1 (ENSOGAG00000015392) #13	WDR83OS (ENSOGAG00000012802)	WDR83 (ENSOGAG00000012803) #14	DHPS (ENSOGAG00000012805) #15	FBXW9 (ENSOGAG00000012187) #16	TNPO2 (ENSOGAG00000012192) #17	TRIR (ENSOGAG00000012203) #18	GET3 (ENSOGAG00000012205) #19	BEST2 (ENSOGAG00000026961) #20	HOOK2 (ENSOGAG00000028323) #21	JUNB (ENSOGAG00000025664) #22	ENSOGAG00000024998 #23	RNASEH2A (ENSOGAG00000012214) #24	RTBDN (ENSOGAG00000012219) #25	MAST1 (ENSOGAG00000012223) #26	DNASE2 (ENSOGAG00000034724) #27	KLF1 (ENSOGAG00000025438) #28	GCDH (ENSOGAG00000012240) #29	FARSA (ENSOGAG00000012243) #30	CALR (ENSOGAG00000012249) #31	RAD23A (ENSOGAG00000007693) #32	GADD45GIP1 (ENSOGAG00000028560) #33	DAND5 (ENSOGAG00000026803) #34	NFIX (ENSOGAG00000017133) #35	LYL1 (ENSOGAG00000033339) #36	TRMT1 (ENSOGAG00000025576) #37
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00390000000053	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Glires	ANCESTRAL SPECIES	21	ENSGT00390000000053	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000000053	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000000053	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Hystricomorpha	ANCESTRAL SPECIES	55					ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.l #31	ENSGT00950000182915.b.b.a.a.k.b #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Hystricomorpha_a	ANCESTRAL SPECIES	15					ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.l #31	ENSGT00950000182915.b.b.a.a.k.b #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000160517	ENSGT00390000013968	ENSGT00660000095541.a.a	ENSGT00390000003094	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.l #31	ENSGT00950000182915.b.b.a.a.k.b #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Long-tailed chinchilla	MODERN SPECIES	122	GINS1 (ENSCLAG00000010830)	NINL (ENSCLAG00000011605)	NANP (ENSCLAG00000014668)	ZNF333 (ENSCLAG00000014959)	MAN2B1 (ENSCLAG00000013086) #13	ENSCLAG00000011821	WDR83 (ENSCLAG00000012198) #14	DHPS (ENSCLAG00000012256) #15	FBXW9 (ENSCLAG00000012587) #16	ENSCLAG00000011841	TNPO2 (ENSCLAG00000013442) #17	TRIR (ENSCLAG00000011164) #18	GET3 (ENSCLAG00000011393) #19	BEST2 (ENSCLAG00000012820) #20	HOOK2 (ENSCLAG00000012972) #21	JUNB (ENSCLAG00000018028) #22	PRDX2 (ENSCLAG00000013924) #23	RNASEH2A (ENSCLAG00000014930) #24	RTBDN (ENSCLAG00000014391) #25	MAST1 (ENSCLAG00000012224) #26	DNASE2 (ENSCLAG00000012983) #27	KLF1 (ENSCLAG00000013218) #28	GCDH (ENSCLAG00000015590) #29	SYCE2 (ENSCLAG00000014420)	FARSA (ENSCLAG00000015489) #30	CALR (ENSCLAG00000012923) #31	RAD23A (ENSCLAG00000016638) #32	GADD45GIP1 (ENSCLAG00000015799) #33	DAND5 (ENSCLAG00000011402) #34	NFIX (ENSCLAG00000013479) #35	LYL1 (ENSCLAG00000014483) #36
Degu	MODERN SPECIES	114	ENSODEG00000014252	ENSODEG00000012295	ENSODEG00000012183	MAN2B1 (ENSODEG00000010434) #13	WDR83OS (ENSODEG00000011674)	WDR83 (ENSODEG00000010258) #14	DHPS (ENSODEG00000010756) #15	ENSODEG00000011490	ENSODEG00000013891	FBXW9 (ENSODEG00000010372) #16	TNPO2 (ENSODEG00000009670) #17	TRIR (ENSODEG00000010879) #18	GET3 (ENSODEG00000010662) #19	BEST2 (ENSODEG00000010248) #20	HOOK2 (ENSODEG00000011305) #21	JUNB (ENSODEG00000019944) #22	PRDX2 (ENSODEG00000009999) #23	RNASEH2A (ENSODEG00000009772) #24	RTBDN (ENSODEG00000011942) #25	ENSODEG00000012916	ENSODEG00000011144 #26	DNASE2 (ENSODEG00000009845) #27	KLF1 (ENSODEG00000009692) #28	GCDH (ENSODEG00000010247) #29	ENSODEG00000010928	FARSA (ENSODEG00000010433) #30	CALR (ENSODEG00000010711) #31	RAD23A (ENSODEG00000011287) #32	GADD45GIP1 (ENSODEG00000010728) #33	ENSODEG00000010129	NFIX (ENSODEG00000010171) #35
Guinea pig	MODERN SPECIES	42	ENSCPOG00000033338	ENSCPOG00000023880	ENSCPOG00000027337	ENSCPOG00000023273	MAN2B1 (ENSCPOG00000002295) #13	WDR83OS (ENSCPOG00000022365)	WDR83 (ENSCPOG00000002306) #14	DHPS (ENSCPOG00000002309) #15	ENSCPOG00000033374	FBXW9 (ENSCPOG00000007026) #16	TNPO2 (ENSCPOG00000007033) #17	TRIR (ENSCPOG00000003765) #18	GET3 (ENSCPOG00000026971) #19	BEST2 (ENSCPOG00000000768) #20	HOOK2 (ENSCPOG00000000771) #21	JUNB (ENSCPOG00000020703) #22	PRDX2 (ENSCPOG00000023583) #23	RNASEH2A (ENSCPOG00000038877) #24	RTBDN (ENSCPOG00000000774) #25	MAST1 (ENSCPOG00000000777) #26	DNASE2 (ENSCPOG00000000783) #27	KLF1 (ENSCPOG00000000784) #28	GCDH (ENSCPOG00000027058) #29	ENSCPOG00000033097	FARSA (ENSCPOG00000000787) #30	CALR (ENSCPOG00000000791) #31	GADD45GIP1 (ENSCPOG00000024072) #33	RAD23A (ENSCPOG00000037407) #32	NFIX (ENSCPOG00000022563) #35	LYL1 (ENSCPOG00000036111) #36	TRMT1 (ENSCPOG00000011754) #37
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00390000000053	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Marmotini	ANCESTRAL SPECIES	41	ENSGT00390000000053	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.b ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Marmotini_b	ANCESTRAL SPECIES	40	ENSGT00390000000053	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.b ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Arctic ground squirrel	MODERN SPECIES	217	ENSUPAG00010007632	ENSUPAG00010007638 #8	ENSUPAG00010007642 ##12	ENSUPAG00010007643 ##12	MAN2B1 (ENSUPAG00010007651) #13	WDR83OS (ENSUPAG00010007669)	WDR83 (ENSUPAG00010007673) #14	DHPS (ENSUPAG00010007686) #15	ENSUPAG00010007702	FBXW9 (ENSUPAG00010007705) #16	TNPO2 (ENSUPAG00010007721) #17	TRIR (ENSUPAG00010007779) #18	GET3 (ENSUPAG00010007783) #19	BEST2 (ENSUPAG00010007798) #20	HOOK2 (ENSUPAG00010007823) #21	JUNB (ENSUPAG00010007878) #22	ENSUPAG00010007882 #23	THSD8 (ENSUPAG00010007901)	RNASEH2A (ENSUPAG00010007909) #24	RTBDN (ENSUPAG00010007981) #25	MAST1 (ENSUPAG00010007994) #26	DNASE2 (ENSUPAG00010008053) #27	KLF1 (ENSUPAG00010008092) #28	GCDH (ENSUPAG00010008102) #29	SYCE2 (ENSUPAG00010008135)	FARSA (ENSUPAG00010008158) #30	CALR (ENSUPAG00010008184) #31	RAD23A (ENSUPAG00010008197) #32	GADD45GIP1 (ENSUPAG00010008222) #33	DAND5 (ENSUPAG00010008227) #34	NFIX (ENSUPAG00010008230) #35
Squirrel	MODERN SPECIES	259	ELOF1 (ENSSTOG00000003687)	ACP5 (ENSSTOG00000003699)	ZNF709 (ENSSTOG00000029196) #8	ENSSTOG00000034910 ##12	MAN2B1 (ENSSTOG00000029598) #13	WDR83OS (ENSSTOG00000006874)	WDR83 (ENSSTOG00000006883) #14	DHPS (ENSSTOG00000006900) #15	ENSSTOG00000030269	FBXW9 (ENSSTOG00000006921) #16	TNPO2 (ENSSTOG00000006952) #17	TRIR (ENSSTOG00000006978) #18	GET3 (ENSSTOG00000006992) #19	BEST2 (ENSSTOG00000019471) #20	HOOK2 (ENSSTOG00000011709) #21	JUNB (ENSSTOG00000031929) #22	ENSSTOG00000025862 #23	RNASEH2A (ENSSTOG00000006224) #24	Rtbdn (ENSSTOG00000006228) #25	MAST1 (ENSSTOG00000008668) #26	DNASE2 (ENSSTOG00000008712) #27	KLF1 (ENSSTOG00000021956) #28	GCDH (ENSSTOG00000008724) #29	SYCE2 (ENSSTOG00000008737)	FARSA (ENSSTOG00000008748) #30	CALR (ENSSTOG00000008774) #31	RAD23A (ENSSTOG00000024117) #32	GADD45GIP1 (ENSSTOG00000016419) #33	DAND5 (ENSSTOG00000016420) #34	NFIX (ENSSTOG00000007848) #35	LYL1 (ENSSTOG00000028401) #36
Alpin marmot	MODERN SPECIES	24	ELOF1 (ENSMMMG00000020499)	ACP5 (ENSMMMG00000020512)	ENSMMMG00000020539 #8	ENSMMMG00000020633 ##12	MAN2B1 (ENSMMMG00000020653) #13	WDR83OS (ENSMMMG00000020687)	WDR83 (ENSMMMG00000020697) #14	DHPS (ENSMMMG00000020706) #15	ENSMMMG00000020713	FBXW9 (ENSMMMG00000020717) #16	TNPO2 (ENSMMMG00000020726) #17	TRIR (ENSMMMG00000020777) #18	GET3 (ENSMMMG00000020781) #19	BEST2 (ENSMMMG00000020790) #20	HOOK2 (ENSMMMG00000020811) #21	JUNB (ENSMMMG00000020869) #22	ENSMMMG00000020873 #23	THSD8 (ENSMMMG00000020877)	RNASEH2A (ENSMMMG00000020879) #24	RTBDN (ENSMMMG00000020903) #25	MAST1 (ENSMMMG00000020911) #26	DNASE2 (ENSMMMG00000020947) #27	KLF1 (ENSMMMG00000020960) #28	GCDH (ENSMMMG00000020963) #29	SYCE2 (ENSMMMG00000020981)	FARSA (ENSMMMG00000020996) #30	CALR (ENSMMMG00000021010) #31	ENSMMMG00000021016 #32	GADD45GIP1 (ENSMMMG00000021032) #33	DAND5 (ENSMMMG00000021038) #34	NFIX (ENSMMMG00000021044) #35
Eurasian red squirrel	MODERN SPECIES	7	ACP5 (ENSSVLG00005024901)	ENSSVLG00005024969 #8	ENSSVLG00005025001 ##12	ENSSVLG00005025025 ##12	ENSSVLG00005025050 #13	ENSSVLG00005025070	ENSSVLG00005025092 #14	DHPS (ENSSVLG00005025110) #15	ENSSVLG00005025134	FBXW9 (ENSSVLG00005025161) #16	TNPO2 (ENSSVLG00005025206) #17	TRIR (ENSSVLG00005025236) #18	ENSSVLG00005025252 #19	BEST2 (ENSSVLG00005025274) #20	HOOK2 (ENSSVLG00005025297) #21	JUNB (ENSSVLG00005025317) #22	PRDX2 (ENSSVLG00005016837) #23	THSD8 (ENSSVLG00005016905)	RNASEH2A (ENSSVLG00005016950) #24	RTBDN (ENSSVLG00005016997) #25	MAST1 (ENSSVLG00005017111) #26	DNASE2 (ENSSVLG00005017585) #27	KLF1 (ENSSVLG00005017619) #28	GCDH (ENSSVLG00005017674) #29	ENSSVLG00005017827	FARSA (ENSSVLG00005017880) #30	CALR (ENSSVLG00005017951) #31	RAD23A (ENSSVLG00005018009) #32	GADD45GIP1 (ENSSVLG00005018098) #33	DAND5 (ENSSVLG00005018136) #34	NFIX (ENSSVLG00005018211) #35
Rodentia_B	ANCESTRAL SPECIES	43				ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Myomorpha	ANCESTRAL SPECIES	52				ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Lesser Egyptian jerboa	MODERN SPECIES	234					ENSJJAG00000020733 #13	Wdr83os (ENSJJAG00000020904)	Wdr83 (ENSJJAG00000015218) #14	ENSJJAG00000019277 #15	Gng14 (ENSJJAG00000019778)	Fbxw9 (ENSJJAG00000019917) #16	Tnpo2 (ENSJJAG00000016820) #17	Trir (ENSJJAG00000016895) #18	Get3 (ENSJJAG00000017121) #19	Best2 (ENSJJAG00000018238) #20	Hook2 (ENSJJAG00000015256) #21	Junb (ENSJJAG00000012180) #22	ENSJJAG00000016489 #23	Rnaseh2a (ENSJJAG00000017547) #24	ENSJJAG00000019577	ENSJJAG00000020016 #26	Dnase2a (ENSJJAG00000000087) #27	Klf1 (ENSJJAG00000004209) #28	Gcdh (ENSJJAG00000018993) #29	Syce2 (ENSJJAG00000021380)	Calr (ENSJJAG00000000115) #31	Rad23a (ENSJJAG00000000606) #32	Dand5 (ENSJJAG00000011222) #34	Nfix (ENSJJAG00000012047) #35	Lyl1 (ENSJJAG00000015977) #36	Trmt1 (ENSJJAG00000017154) #37	Nacc1 (ENSJJAG00000000199)
Muroidea	ANCESTRAL SPECIES	60				ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000164424	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Cricetinae	ANCESTRAL SPECIES	40					ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36	ENSGT00530000063646.b #37
Golden Hamster	MODERN SPECIES	877									Dhps (ENSMAUG00000001398) #15	Gng14 (ENSMAUG00000001143)	Fbxw9 (ENSMAUG00000020565) #16	ENSMAUG00000007313 #17	Trir (ENSMAUG00000019320) #18	Best2 (ENSMAUG00000010704) #20	Hook2 (ENSMAUG00000013561) #21	Junb (ENSMAUG00000004233) #22	Prdx2 (ENSMAUG00000005262) #23	ENSMAUG00000021740 #24	Mast1 (ENSMAUG00000001337) #26	Dnase2a (ENSMAUG00000012610) #27	Klf1 (ENSMAUG00000021937) #28	Gcdh (ENSMAUG00000012276) #29	Syce2 (ENSMAUG00000015586)	ENSMAUG00000000609	Farsa (ENSMAUG00000009188) #30	Rad23a (ENSMAUG00000009327) #32	Gadd45gip1 (ENSMAUG00000001145) #33	Dand5 (ENSMAUG00000020203) #34	Nfix (ENSMAUG00000018106) #35	Trmt1 (ENSMAUG00000011134) #37	Nacc1 (ENSMAUG00000004663)
Chinese hamster chok1gshd	MODERN SPECIES	347			ENSCGRG00001020030	ENSCGRG00001021004	Man2b1 (ENSCGRG00001022182) #13	Wdr83os (ENSCGRG00001011873)	Wdr83 (ENSCGRG00001012536) #14	Dhps (ENSCGRG00001013178) #15	Gng14 (ENSCGRG00001013712)	Fbxw9 (ENSCGRG00001014378) #16	Tnpo2 (ENSCGRG00001015917) #17	Trir (ENSCGRG00001014029) #18	ASNA1 (ENSCGRG00001015158) #19	Best2 (ENSCGRG00001016555) #20	Hook2 (ENSCGRG00001021145) #21	Junb (ENSCGRG00001015135) #22	PRDX2 (ENSCGRG00001001765) #23	Rnaseh2a (ENSCGRG00001005021) #24	Mast1 (ENSCGRG00001012818) #26	Dnase2a (ENSCGRG00001011489) #27	Klf1 (ENSCGRG00001011893) #28	Gcdh (ENSCGRG00001012582) #29	Syce2 (ENSCGRG00001013520)	Farsa (ENSCGRG00001019769) #30	Calr (ENSCGRG00001020181) #31	Rad23a (ENSCGRG00001020853) #32	Gadd45gip1 (ENSCGRG00001000298) #33	Dand5 (ENSCGRG00001000588) #34	Nfix (ENSCGRG00001013186) #35	Lyl1 (ENSCGRG00001020161) #36	Trmt1 (ENSCGRG00001022594) #37
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000164424	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Prairie vole	MODERN SPECIES	98	Mylk3 (ENSMOCG00000008937)	Orc6 (ENSMOCG00000020756)	Vps35 (ENSMOCG00000002997)	ENSMOCG00000006321	Man2b1 (ENSMOCG00000019337) #13	Wdr83os (ENSMOCG00000000084)	Wdr83 (ENSMOCG00000015572) #14	Dhps (ENSMOCG00000020268) #15	Gng14 (ENSMOCG00000002530)	ENSMOCG00000003557 #16	Tnpo2 (ENSMOCG00000016489) #17	Trir (ENSMOCG00000009371) #18	Get3 (ENSMOCG00000002658) #19	Best2 (ENSMOCG00000006958) #20	Hook2 (ENSMOCG00000014258) #21	Junb (ENSMOCG00000003238) #22	ENSMOCG00000020752 #23	Rnaseh2a (ENSMOCG00000017408) #24	Rtbdn (ENSMOCG00000002540) #25	Mast1 (ENSMOCG00000015813) #26	Dnase2a (ENSMOCG00000001379) #27	Klf1 (ENSMOCG00000015689) #28	Gcdh (ENSMOCG00000005123) #29	Syce2 (ENSMOCG00000016839)	Farsa (ENSMOCG00000011399) #30	Calr (ENSMOCG00000003128) #31	Rad23a (ENSMOCG00000008410) #32	Gadd45gip1 (ENSMOCG00000017223) #33	Dand5 (ENSMOCG00000006477) #34	ENSMOCG00000009634	Clec4g (ENSMOCG00000007606)
Northern American deer mouse	MODERN SPECIES	18	Vps35 (ENSPEMG00000011942)	Or7c19 (ENSPEMG00000024814)	ENSPEMG00000025354	ENSPEMG00000026081	ENSPEMG00000025750	Wdr83os (ENSPEMG00000025345)	Wdr83 (ENSPEMG00000014294) #14	Dhps (ENSPEMG00000019124) #15	Gng14 (ENSPEMG00000029438)	Fbxw9 (ENSPEMG00000017063) #16	Tnpo2 (ENSPEMG00000018702) #17	Trir (ENSPEMG00000016449) #18	Get3 (ENSPEMG00000016543) #19	Best2 (ENSPEMG00000015867) #20	Hook2 (ENSPEMG00000009962) #21	Junb (ENSPEMG00000006961) #22	Prdx2 (ENSPEMG00000000538) #23	Gm49661 (ENSPEMG00000029668)	Rnaseh2a (ENSPEMG00000018009) #24	Rtbdn (ENSPEMG00000024999) #25	Mast1 (ENSPEMG00000010588) #26	Dnase2a (ENSPEMG00000000677) #27	Klf1 (ENSPEMG00000017635) #28	Gcdh (ENSPEMG00000009103) #29	Syce2 (ENSPEMG00000016357)	Farsa (ENSPEMG00000012560) #30	Calr (ENSPEMG00000001949) #31	Rad23a (ENSPEMG00000006140) #32	Gadd45gip1 (ENSPEMG00000011904) #33	Dand5 (ENSPEMG00000017061) #34	Nfix (ENSPEMG00000011765) #35
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.g.a #23	ENSGT00870000137755	ENSGT00940000155828.h #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856.d #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34
Mus	ANCESTRAL SPECIES	6	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.g.a #23	ENSGT00870000137755	ENSGT00940000155828.h #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856.d #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121.i	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.g.a #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856.d #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121.i	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.g.a #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856.d #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121.i	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828.g.a #23	ENSGT00870000137755	ENSGT00940000155828.h #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856.d #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00940000157455.z	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33
Steppe mouse	MODERN SPECIES	2800	Or7c19 (ENSMSIG00000013170)	Cks1brt (ENSMSIG00000013203)	ENSMSIG00000013214	Zfp791 (ENSMSIG00000013223) #12	ENSMSIG00000013245	Man2b1 (ENSMSIG00000013254) #13	Wdr83os (ENSMSIG00000013323)	Wdr83 (ENSMSIG00000013337) #14	Dhps (ENSMSIG00000013355) #15	Gng14 (ENSMSIG00000013367)	Fbxw9 (ENSMSIG00000013376) #16	Tnpo2 (ENSMSIG00000013409) #17	Trir (ENSMSIG00000013540) #18	Get3 (ENSMSIG00000013568) #19	Hook2 (ENSMSIG00000013603) #21	Junb (ENSMSIG00000013671) #22	Prdx2 (ENSMSIG00000013681) #23	Gm49661 (ENSMSIG00000013769)	Rnaseh2a (ENSMSIG00000013788) #24	Rtbdn (ENSMSIG00000013845) #25	ENSMSIG00000013886 #26	Dnase2a (ENSMSIG00000013905) #27	Klf1 (ENSMSIG00000013957) #28	Gcdh (ENSMSIG00000013969) #29	Syce2 (ENSMSIG00000013998)	Farsa (ENSMSIG00000014035) #30	ENSMSIG00000014114	ENSMSIG00000014123 #31	Rad23a (ENSMSIG00000014128) #32	Gadd45gip1 (ENSMSIG00000014154) #33	Dand5 (ENSMSIG00000014166) #34
spretus	MODERN SPECIES	17	Orc6 (MGP_SPRETEiJ_G0032455)	Vps35 (MGP_SPRETEiJ_G0032454)	Or7c19 (MGP_SPRETEiJ_G0032453)	Zfp791 (MGP_SPRETEiJ_G0032452) #12	Man2b1 (MGP_SPRETEiJ_G0032451) #13	Wdr83os (MGP_SPRETEiJ_G0032450)	Wdr83 (MGP_SPRETEiJ_G0032449) #14	Dhps (MGP_SPRETEiJ_G0032448) #15	Gng14 (MGP_SPRETEiJ_G0032447)	Fbxw9 (MGP_SPRETEiJ_G0032446) #16	Tnpo2 (MGP_SPRETEiJ_G0032445) #17	Trir (MGP_SPRETEiJ_G0032444) #18	Get3 (MGP_SPRETEiJ_G0032443) #19	Best2 (MGP_SPRETEiJ_G0032442) #20	Hook2 (MGP_SPRETEiJ_G0032441) #21	Junb (MGP_SPRETEiJ_G0032440) #22	MGP_SPRETEiJ_G0032439 #23	Rnaseh2a (MGP_SPRETEiJ_G0032438) #24	Rtbdn (MGP_SPRETEiJ_G0032437) #25	Mast1 (MGP_SPRETEiJ_G0032436) #26	Dnase2a (MGP_SPRETEiJ_G0032435) #27	Klf1 (MGP_SPRETEiJ_G0032434) #28	Gcdh (MGP_SPRETEiJ_G0032433) #29	Syce2 (MGP_SPRETEiJ_G0032432)	Farsa (MGP_SPRETEiJ_G0032431) #30	MGP_SPRETEiJ_G0032430	Calr (MGP_SPRETEiJ_G0032429) #31	Rad23a (MGP_SPRETEiJ_G0032428) #32	Gadd45gip1 (MGP_SPRETEiJ_G0032427) #33	Dand5 (MGP_SPRETEiJ_G0032426) #34	MGP_SPRETEiJ_G0032425
Mouse	MODERN SPECIES	17	Vps35 (ENSMUSG00000031696)	Or7c19 (ENSMUSG00000051952)	Cks1brt (ENSMUSG00000062687)	Zfp791 (ENSMUSG00000074194) #12	Man2b1 (ENSMUSG00000005142) #13	Wdr83os (ENSMUSG00000059355)	Wdr83 (ENSMUSG00000005150) #14	Dhps (ENSMUSG00000060038) #15	Gng14 (ENSMUSG00000095845)	Fbxw9 (ENSMUSG00000008167) #16	Tnpo2 (ENSMUSG00000031691) #17	Trir (ENSMUSG00000041203) #18	Get3 (ENSMUSG00000052456) #19	Best2 (ENSMUSG00000052819) #20	Hook2 (ENSMUSG00000052566) #21	Junb (ENSMUSG00000052837) #22	Prdx2 (ENSMUSG00000005161) #23	Gm49661 (ENSMUSG00000111184)	Rnaseh2a (ENSMUSG00000052926) #24	Rtbdn (ENSMUSG00000048617) #25	Mast1 (ENSMUSG00000053693) #26	Dnase2a (ENSMUSG00000003812) #27	Klf1 (ENSMUSG00000054191) #28	Gcdh (ENSMUSG00000003809) #29	Syce2 (ENSMUSG00000003824)	Farsa (ENSMUSG00000003808) #30	Calr (ENSMUSG00000003814) #31	Rad23a (ENSMUSG00000003813) #32	Gadd45gip1 (ENSMUSG00000033751) #33	Dand5 (ENSMUSG00000053226) #34	Lyl1 (ENSMUSG00000034041) #36
Ryukyu mouse	MODERN SPECIES	17	Orc6 (MGP_CAROLIEiJ_G0031336)	Vps35 (MGP_CAROLIEiJ_G0031335)	Or7c19 (MGP_CAROLIEiJ_G0031334)	Zfp791 (MGP_CAROLIEiJ_G0031333) #12	Man2b1 (MGP_CAROLIEiJ_G0031332) #13	Wdr83os (MGP_CAROLIEiJ_G0031331)	Wdr83 (MGP_CAROLIEiJ_G0031330) #14	Dhps (MGP_CAROLIEiJ_G0031329) #15	Gng14 (MGP_CAROLIEiJ_G0031328)	Fbxw9 (MGP_CAROLIEiJ_G0031327) #16	Tnpo2 (MGP_CAROLIEiJ_G0031326) #17	Trir (MGP_CAROLIEiJ_G0031325) #18	Get3 (MGP_CAROLIEiJ_G0031324) #19	Best2 (MGP_CAROLIEiJ_G0031323) #20	Hook2 (MGP_CAROLIEiJ_G0031322) #21	Junb (MGP_CAROLIEiJ_G0031321) #22	Prdx2 (MGP_CAROLIEiJ_G0031320) #23	MGP_CAROLIEiJ_G0031319 #24	Rtbdn (MGP_CAROLIEiJ_G0031318) #25	Mast1 (MGP_CAROLIEiJ_G0031317) #26	Dnase2a (MGP_CAROLIEiJ_G0031316) #27	Klf1 (MGP_CAROLIEiJ_G0031315) #28	Gcdh (MGP_CAROLIEiJ_G0031314) #29	Syce2 (MGP_CAROLIEiJ_G0031313)	Farsa (MGP_CAROLIEiJ_G0031312) #30	Calr (MGP_CAROLIEiJ_G0031311) #31	Rad23a (MGP_CAROLIEiJ_G0031310) #32	Gadd45gip1 (MGP_CAROLIEiJ_G0031309) #33	Dand5 (MGP_CAROLIEiJ_G0031308) #34	MGP_CAROLIEiJ_G0031307	Lyl1 (MGP_CAROLIEiJ_G0031306) #36
Shrew mouse	MODERN SPECIES	12	Mylk3 (MGP_PahariEiJ_G0022941)	Orc6 (MGP_PahariEiJ_G0022940)	Vps35 (MGP_PahariEiJ_G0022939)	Or7c19 (MGP_PahariEiJ_G0022938)	Zfp791 (MGP_PahariEiJ_G0022937) #12	Man2b1 (MGP_PahariEiJ_G0022936) #13	Wdr83 (MGP_PahariEiJ_G0022935) #14	Dhps (MGP_PahariEiJ_G0022934) #15	Gng14 (MGP_PahariEiJ_G0022933)	Fbxw9 (MGP_PahariEiJ_G0022932) #16	Tnpo2 (MGP_PahariEiJ_G0022931) #17	Trir (MGP_PahariEiJ_G0022930) #18	Get3 (MGP_PahariEiJ_G0022929) #19	Best2 (MGP_PahariEiJ_G0022928) #20	Hook2 (MGP_PahariEiJ_G0022927) #21	Junb (MGP_PahariEiJ_G0022926) #22	MGP_PahariEiJ_G0022925 #23	Rnaseh2a (MGP_PahariEiJ_G0022924) #24	MGP_PahariEiJ_G0022923 #25	Mast1 (MGP_PahariEiJ_G0022922) #26	Dnase2a (MGP_PahariEiJ_G0022921) #27	Klf1 (MGP_PahariEiJ_G0022920) #28	Gcdh (MGP_PahariEiJ_G0022919) #29	Syce2 (MGP_PahariEiJ_G0022918)	Farsa (MGP_PahariEiJ_G0022917) #30	Calr (MGP_PahariEiJ_G0022916) #31	Rad23a (MGP_PahariEiJ_G0022915) #32	Gadd45gip1 (MGP_PahariEiJ_G0022914) #33	Dand5 (MGP_PahariEiJ_G0022913) #34	Nfix (MGP_PahariEiJ_G0022912) #35	Lyl1 (MGP_PahariEiJ_G0022911) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1738			ENSNGAG00000020517	ENSNGAG00000005762 #12	ENSNGAG00000022764 #13	Wdr83os (ENSNGAG00000022509)	Wdr83 (ENSNGAG00000001041) #14	ENSNGAG00000008057 #15	Gng14 (ENSNGAG00000018951)	ENSNGAG00000017579 #16	Tnpo2 (ENSNGAG00000000650) #17	Trir (ENSNGAG00000017973) #18	Get3 (ENSNGAG00000015555) #19	Best2 (ENSNGAG00000014058) #20	Hook2 (ENSNGAG00000022705) #21	Junb (ENSNGAG00000006939) #22	Prdx2 (ENSNGAG00000022496) #23	Rnaseh2a (ENSNGAG00000017988) #24	Rtbdn (ENSNGAG00000011358) #25	Mast1 (ENSNGAG00000002377) #26	Dnase2a (ENSNGAG00000022792) #27	Klf1 (ENSNGAG00000022931) #28	Gcdh (ENSNGAG00000022070) #29	Syce2 (ENSNGAG00000023150)	Farsa (ENSNGAG00000018353) #30	Calr (ENSNGAG00000011286) #31	Rad23a (ENSNGAG00000022186) #32	Gadd45gip1 (ENSNGAG00000022030) #33	Dand5 (ENSNGAG00000021187) #34	Nfix (ENSNGAG00000016724) #35	Lyl1 (ENSNGAG00000014673) #36
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b #8	ENSGT00950000182755.b.a.a.a.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00940000166764	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00530000063926.b #34
Suina	ANCESTRAL SPECIES	16	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT00950000182755.b.a.a.a.a.a.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b #35
Chacoan peccary	MODERN SPECIES	769																JUNB (ENSCWAG00000000438) #22	ENSCWAG00000000453 #23	THSD8 (ENSCWAG00000000470)	RNASEH2A (ENSCWAG00000000486) #24	RTBDN (ENSCWAG00000000515) #25	MAST1 (ENSCWAG00000000559) #26	DNASE2 (ENSCWAG00000000717) #27	KLF1 (ENSCWAG00000000736) #28	GCDH (ENSCWAG00000000760) #29	SYCE2 (ENSCWAG00000000797)	FARSA (ENSCWAG00000000829) #30	CALR (ENSCWAG00000000858) #31	RAD23A (ENSCWAG00000000887) #32	GADD45GIP1 (ENSCWAG00000000909) #33	NFIX (ENSCWAG00000000950) #35	LYL1 (ENSCWAG00000001006) #36
Pig	MODERN SPECIES	10	ENSSSCG00000022634 ##12	ENSSSCG00000033388 #8	ENSSSCG00000046939	ENSSSCG00000029347 #8	MAN2B1 (ENSSSCG00000013720) #13	WDR83OS (ENSSSCG00000013721)	WDR83 (ENSSSCG00000013722) #14	DHPS (ENSSSCG00000013723) #15	ENSSSCG00000052605	FBXW9 (ENSSSCG00000013725) #16	TNPO2 (ENSSSCG00000013726) #17	TRIR (ENSSSCG00000013727) #18	GET3 (ENSSSCG00000038776) #19	BEST2 (ENSSSCG00000013733) #20	HOOK2 (ENSSSCG00000013734) #21	JUNB (ENSSSCG00000013735) #22	PRDX2 (ENSSSCG00000013736) #23	RNASEH2A (ENSSSCG00000013737) #24	RTBDN (ENSSSCG00000033304) #25	MAST1 (ENSSSCG00000013732) #26	DNASE2 (ENSSSCG00000013731) #27	KLF1 (ENSSSCG00000013730) #28	GCDH (ENSSSCG00000013729) #29	SYCE2 (ENSSSCG00000013740)	FARSA (ENSSSCG00000013745) #30	CALR (ENSSSCG00000013746) #31	GADD45GIP1 (ENSSSCG00000034859) #33	RAD23A (ENSSSCG00000013747) #32	ENSSSCG00000048273	NFIX (ENSSSCG00000013742) #35	LYL1 (ENSSSCG00000024549) #36
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00940000163146	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00530000063926.b #34
Camelidae	ANCESTRAL SPECIES	69	ENSGT00940000162532	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36	ENSGT00530000063646.b #37
Arabian camel	MODERN SPECIES	14	ENSCDRG00005022235 ##12	ENSCDRG00005022234 ##12	ENSCDRG00005022231 ##12	ENSCDRG00005022228 #8	MAN2B1 (ENSCDRG00005022226) #13	WDR83OS (ENSCDRG00005022225)	WDR83 (ENSCDRG00005022223) #14	DHPS (ENSCDRG00005022217) #15	ENSCDRG00005022213	FBXW9 (ENSCDRG00005022210) #16	TNPO2 (ENSCDRG00005022205) #17	TRIR (ENSCDRG00005022203) #18	ASNA1 (ENSCDRG00005022202) #19	BEST2 (ENSCDRG00005022200) #20	HOOK2 (ENSCDRG00005022199) #21	JUNB (ENSCDRG00005022198) #22	PRDX2 (ENSCDRG00005022195) #23	THSD8 (ENSCDRG00005022194)	RNASEH2A (ENSCDRG00005022193) #24	RTBDN (ENSCDRG00005022192) #25	MAST1 (ENSCDRG00005022190) #26	DNASE2 (ENSCDRG00005022189) #27	KLF1 (ENSCDRG00005022188) #28	GCDH (ENSCDRG00005022187) #29	FARSA (ENSCDRG00005022184) #30	CALR (ENSCDRG00005022183) #31	RAD23A (ENSCDRG00005022180) #32	GADD45GIP1 (ENSCDRG00005022178) #33	ENSCDRG00005022176	NFIX (ENSCDRG00005022174) #35	LYL1 (ENSCDRG00005022168) #36
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000182755.b.a.a.b.a.b.b.a.a ##12	ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00530000063926.b #34
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000154131	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000182755.b.a.a.b.a.b.b.a.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.m #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00530000063926.b #34
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000154619.g.b.a.a	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.m #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00530000063926.b #34
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000162532	ENSGT00940000163783	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.m #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00530000063926.b #34
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000162532	ENSGT00940000163783	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.m #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b #35
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000162532	ENSGT00940000163783	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.a.b ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000266406	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.m #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b #35
Beluga whale	MODERN SPECIES	27	ENSDLEG00000009867 ##12	ENSDLEG00000009886 ##12	ENSDLEG00000009975 #8	ENSDLEG00000009987 #8	ENSDLEG00000010003 #8	MAN2B1 (ENSDLEG00000010021) #13	WDR83OS (ENSDLEG00000010133)	WDR83 (ENSDLEG00000010152) #14	DHPS (ENSDLEG00000010176) #15	FBXW9 (ENSDLEG00000010197) #16	TNPO2 (ENSDLEG00000010236) #17	TRIR (ENSDLEG00000010365) #18	ASNA1 (ENSDLEG00000010378) #19	BEST2 (ENSDLEG00000010397) #20	HOOK2 (ENSDLEG00000010436) #21	JUNB (ENSDLEG00000010512) #22	PRDX2 (ENSDLEG00000010520) #23	RNASEH2A (ENSDLEG00000010529) #24	RTBDN (ENSDLEG00000010548) #25	MAST1 (ENSDLEG00000010566) #26	DNASE2 (ENSDLEG00000010624) #27	GCDH (ENSDLEG00000010654) #29	KLF1 (ENSDLEG00000010698) #28	SYCE2 (ENSDLEG00000010725)	FARSA (ENSDLEG00000010737) #30	CALR (ENSDLEG00000010762) #31	RAD23A (ENSDLEG00000010781) #32	GADD45GIP1 (ENSDLEG00000010807) #33	NFIX (ENSDLEG00000010831) #35	LYL1 (ENSDLEG00000010935) #36	TRMT1 (ENSDLEG00000010945) #37
Narwhal	MODERN SPECIES	298	ENSMMNG00015005166 ##12	ENSMMNG00015005127 #8	ENSMMNG00015005113 ##12	ENSMMNG00015005109	MAN2B1 (ENSMMNG00015005071) #13	WDR83OS (ENSMMNG00015005049)	WDR83 (ENSMMNG00015005037) #14	DHPS (ENSMMNG00015005018) #15	ENSMMNG00015005005	FBXW9 (ENSMMNG00015005000) #16	TNPO2 (ENSMMNG00015004980) #17	TRIR (ENSMMNG00015004970) #18	GET3 (ENSMMNG00015004960) #19	BEST2 (ENSMMNG00015004949) #20	HOOK2 (ENSMMNG00015004937) #21	JUNB (ENSMMNG00015004931) #22	PRDX2 (ENSMMNG00015004919) #23	THSD8 (ENSMMNG00015004915)	RNASEH2A (ENSMMNG00015004907) #24	RTBDN (ENSMMNG00015004901) #25	MAST1 (ENSMMNG00015004880) #26	DNASE2 (ENSMMNG00015004869) #27	KLF1 (ENSMMNG00015004865) #28	GCDH (ENSMMNG00015004861) #29	SYCE2 (ENSMMNG00015004858)	FARSA (ENSMMNG00015004851) #30	ENSMMNG00015004845 #31	RAD23A (ENSMMNG00015004840) #32	GADD45GIP1 (ENSMMNG00015005584) #33	ENSMMNG00015005553	NFIX (ENSMMNG00015005457) #35
Vaquita	MODERN SPECIES	14	ENSPSNG00000000514 ##12	ENSPSNG00000000493 ##12	ENSPSNG00000000476 ##12	ENSPSNG00000000426 #8	ENSPSNG00000000399 #8	MAN2B1 (ENSPSNG00000000314) #13	WDR83 (ENSPSNG00000000274) #14	WDR83OS (ENSPSNG00000000152)	DHPS (ENSPSNG00000000212) #15	ENSPSNG00000000122	FBXW9 (ENSPSNG00000000092) #16	TNPO2 (ENSPSNG00000007421) #17	TRIR (ENSPSNG00000007370) #18	BEST2 (ENSPSNG00000007304) #20	HOOK2 (ENSPSNG00000007235) #21	JUNB (ENSPSNG00000007194) #22	PRDX2 (ENSPSNG00000007156) #23	RNASEH2A (ENSPSNG00000007087) #24	RTBDN (ENSPSNG00000007000) #25	MAST1 (ENSPSNG00000006815) #26	DNASE2 (ENSPSNG00000006758) #27	KLF1 (ENSPSNG00000006733) #28	GCDH (ENSPSNG00000006697) #29	FARSA (ENSPSNG00000006551) #30	CALR (ENSPSNG00000006361) #31	RAD23A (ENSPSNG00000006274) #32	GADD45GIP1 (ENSPSNG00000006226) #33	ENSPSNG00000006174	NFIX (ENSPSNG00000005985) #35	LYL1 (ENSPSNG00000005801) #36	TRMT1 (ENSPSNG00000005699) #37
Dolphin	MODERN SPECIES	135														BEST2 (ENSTTRG00000003586) #20	HOOK2 (ENSTTRG00000003588) #21	JUNB (ENSTTRG00000003590) #22	PRDX2 (ENSTTRG00000003591) #23	RNASEH2A (ENSTTRG00000003592) #24	RTBDN (ENSTTRG00000003593) #25	MAST1 (ENSTTRG00000003594) #26	DNASE2 (ENSTTRG00000003595) #27	KLF1 (ENSTTRG00000003596) #28	GCDH (ENSTTRG00000003597) #29	SYCE2 (ENSTTRG00000003598)	FARSA (ENSTTRG00000003599) #30	CALR (ENSTTRG00000003600) #31	RAD23A (ENSTTRG00000003601) #32	GADD45GIP1 (ENSTTRG00000003602) #33
Sperm whale	MODERN SPECIES	26						WDR83OS (ENSPCTG00005017991)	WDR83 (ENSPCTG00005018037) #14	DHPS (ENSPCTG00005018077) #15	ENSPCTG00005018240	FBXW9 (ENSPCTG00005018271) #16	TNPO2 (ENSPCTG00005018339) #17	TRIR (ENSPCTG00005018441) #18	ASNA1 (ENSPCTG00005018458) #19	BEST2 (ENSPCTG00005018605) #20	HOOK2 (ENSPCTG00005018712) #21	JUNB (ENSPCTG00005018767) #22	PRDX2 (ENSPCTG00005018785) #23	THSD8 (ENSPCTG00005018824)	RNASEH2A (ENSPCTG00005018850) #24	RTBDN (ENSPCTG00005018893) #25	MAST1 (ENSPCTG00005019033) #26	DNASE2 (ENSPCTG00005019363) #27	KLF1 (ENSPCTG00005019380) #28	GCDH (ENSPCTG00005019424) #29	SYCE2 (ENSPCTG00005019462)	FARSA (ENSPCTG00005019481) #30	CALR (ENSPCTG00005019546) #31	RAD23A (ENSPCTG00005019572) #32	GADD45GIP1 (ENSPCTG00005019623) #33
Blue whale	MODERN SPECIES	14	ZNF625 (ENSBMSG00010005629)	ENSBMSG00010005640 #8	ENSBMSG00010005651 #8	ENSBMSG00010005656	MAN2B1 (ENSBMSG00010005667) #13	WDR83OS (ENSBMSG00010005684)	WDR83 (ENSBMSG00010005695) #14	DHPS (ENSBMSG00010005704) #15	ENSBMSG00010005715	FBXW9 (ENSBMSG00010005739) #16	TNPO2 (ENSBMSG00010005781) #17	TRIR (ENSBMSG00010005806) #18	GET3 (ENSBMSG00010005817) #19	BEST2 (ENSBMSG00010005835) #20	HOOK2 (ENSBMSG00010005872) #21	JUNB (ENSBMSG00010005909) #22	PRDX2 (ENSBMSG00010005921) #23	THSD8 (ENSBMSG00010005934)	RNASEH2A (ENSBMSG00010005947) #24	RTBDN (ENSBMSG00010005967) #25	MAST1 (ENSBMSG00010006004) #26	DNASE2 (ENSBMSG00010006057) #27	KLF1 (ENSBMSG00010006067) #28	GCDH (ENSBMSG00010006092) #29	ENSBMSG00010006111	FARSA (ENSBMSG00010006124) #30	ENSBMSG00010006144 #31	RAD23A (ENSBMSG00010006168) #32	GADD45GIP1 (ENSBMSG00010006182) #33	NFIX (ENSBMSG00010006215) #35	LYL1 (ENSBMSG00010006239) #36
Pecora	ANCESTRAL SPECIES		ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000182755.b.a.a.b.a.b.b.a.a ##12	ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Percora_a	ANCESTRAL SPECIES		ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000182755.b.a.a.b.a.b.b.a.a ##12	ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Bovidae	ANCESTRAL SPECIES		ENSGT00940000163044.c	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.b ##12	ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Bovinae	ANCESTRAL SPECIES	2	ENSGT00940000163044.c	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.b ##12	ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Bos	ANCESTRAL SPECIES	3	ENSGT00940000163044.c	ENSGT00440000039287	ENSGT00950000182755.b.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000163044.c	ENSGT00440000039287	ENSGT00950000182755.b.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36	ENSGT00530000063646.b.r #37
Cow	MODERN SPECIES	26	OR1M1 (ENSBTAG00000035399)	ENSBTAG00000055295	ENSBTAG00000049339 ##12	ENSBTAG00000016721 #8	MAN2B1 (ENSBTAG00000006241) #13	WDR83OS (ENSBTAG00000006244)	WDR83 (ENSBTAG00000006245) #14	DHPS (ENSBTAG00000006247) #15	GNG14 (ENSBTAG00000006251)	FBXW9 (ENSBTAG00000020924) #16	TNPO2 (ENSBTAG00000011811) #17	TRIR (ENSBTAG00000011825) #18	GET3 (ENSBTAG00000011837) #19	BEST2 (ENSBTAG00000025652) #20	HOOK2 (ENSBTAG00000008654) #21	JUNB (ENSBTAG00000012046) #22	PRDX2 (ENSBTAG00000012062) #23	RNASEH2A (ENSBTAG00000009661) #24	RTBDN (ENSBTAG00000006077) #25	MAST1 (ENSBTAG00000006080) #26	DNASE2 (ENSBTAG00000006082) #27	KLF1 (ENSBTAG00000006083) #28	GCDH (ENSBTAG00000016211) #29	SYCE2 (ENSBTAG00000016213)	FARSA (ENSBTAG00000021374) #30	CALR (ENSBTAG00000015114) #31	RAD23A (ENSBTAG00000015116) #32	GADD45GIP1 (ENSBTAG00000015117) #33	NFIX (ENSBTAG00000018229) #35	LYL1 (ENSBTAG00000019329) #36	TRMT1 (ENSBTAG00000019325) #37
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005004175	ENSBIXG00005024398 #8	ENSBIXG00005004163	ENSBIXG00005024372 #8	MAN2B1 (ENSBIXG00005024343) #13	WDR83OS (ENSBIXG00005024294)	WDR83 (ENSBIXG00005004147) #14	DHPS (ENSBIXG00005024243) #15	FBXW9 (ENSBIXG00005024191) #16	ENSBIXG00005024114	TNPO2 (ENSBIXG00005024052) #17	GET3 (ENSBIXG00005023763) #19	BEST2 (ENSBIXG00005004058) #20	HOOK2 (ENSBIXG00005023624) #21	PRDX2 (ENSBIXG00005004022) #23	JUNB (ENSBIXG00005023431) #22	RNASEH2A (ENSBIXG00005023406) #24	RTBDN (ENSBIXG00005007174) #25	MAST1 (ENSBIXG00005023334) #26	DNASE2 (ENSBIXG00005023267) #27	KLF1 (ENSBIXG00005006052) #28	GCDH (ENSBIXG00005006673) #29	ENSBIXG00005023188	FARSA (ENSBIXG00005023164) #30	CALR (ENSBIXG00005023092) #31	RAD23A (ENSBIXG00005023035) #32	GADD45GIP1 (ENSBIXG00005022995) #33	NACC1 (ENSBIXG00005003906)	LYL1 (ENSBIXG00005003796) #36	TRMT1 (ENSBIXG00005022272) #37	STX10 (ENSBIXG00005006889)
Bos_a	ANCESTRAL SPECIES	57	ENSGT00940000163044.c	ENSGT00440000039287	ENSGT00950000182755.b.a.b ##12	ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Domestic yak	MODERN SPECIES	27	ENSBGRG00000004779	ENSBGRG00000004802	ENSBGRG00000004914 #8	ENSBGRG00000005014	MAN2B1 (ENSBGRG00000005041) #13	WDR83OS (ENSBGRG00000005213)	WDR83 (ENSBGRG00000005260) #14	DHPS (ENSBGRG00000005293) #15	ENSBGRG00000005368	FBXW9 (ENSBGRG00000005389) #16	TNPO2 (ENSBGRG00000005497) #17	TRIR (ENSBGRG00000005621) #18	GET3 (ENSBGRG00000005656) #19	BEST2 (ENSBGRG00000005756) #20	HOOK2 (ENSBGRG00000005838) #21	JUNB (ENSBGRG00000006220) #22	PRDX2 (ENSBGRG00000006234) #23	THSD8 (ENSBGRG00000006299)	RNASEH2A (ENSBGRG00000006330) #24	RTBDN (ENSBGRG00000006406) #25	MAST1 (ENSBGRG00000006558) #26	DNASE2 (ENSBGRG00000006722) #27	KLF1 (ENSBGRG00000006745) #28	GCDH (ENSBGRG00000006775) #29	SYCE2 (ENSBGRG00000006880)	FARSA (ENSBGRG00000006949) #30	CALR (ENSBGRG00000007159) #31	RAD23A (ENSBGRG00000007230) #32	GADD45GIP1 (ENSBGRG00000007568) #33	NFIX (ENSBGRG00000007656) #35	LYL1 (ENSBGRG00000008585) #36
Caprinae	ANCESTRAL SPECIES	3	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT00940000156532.l	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020000435	ENSOARG00020000419 ##12	ENSOARG00020000407 ##12	ENSOARG00020000232	ENSOARG00020013719	MAN2B1 (ENSOARG00020012993) #13	WDR83OS (ENSOARG00020012900)	WDR83 (ENSOARG00020012835) #14	DHPS (ENSOARG00020012703) #15	ENSOARG00020012653	FBXW9 (ENSOARG00020012297) #16	TNPO2 (ENSOARG00020012156) #17	TRIR (ENSOARG00020012000) #18	ASNA1 (ENSOARG00020011930) #19	BEST2 (ENSOARG00020011833) #20	JUNB (ENSOARG00020011427) #22	PRDX2 (ENSOARG00020011331) #23	THSD8 (ENSOARG00020011281)	RNASEH2A (ENSOARG00020011239) #24	RTBDN (ENSOARG00020011079) #25	MAST1 (ENSOARG00020010455) #26	DNASE2 (ENSOARG00020010363) #27	KLF1 (ENSOARG00020010329) #28	GCDH (ENSOARG00020010253) #29	FARSA (ENSOARG00020010040) #30	CALR (ENSOARG00020009931) #31	RAD23A (ENSOARG00020009840) #32	GADD45GIP1 (ENSOARG00020009801) #33	NFIX (ENSOARG00020008684) #35	LYL1 (ENSOARG00020008580) #36	TRMT1 (ENSOARG00020008381) #37
Goat	MODERN SPECIES	26	ENSCHIG00000020779 #8	ENSCHIG00000008992 #8	ENSCHIG00000019636	ENSCHIG00000016295	MAN2B1 (ENSCHIG00000001921) #13	WDR83OS (ENSCHIG00000020903)	WDR83 (ENSCHIG00000025793) #14	DHPS (ENSCHIG00000011017) #15	ENSCHIG00000018933	FBXW9 (ENSCHIG00000027225) #16	TNPO2 (ENSCHIG00000011718) #17	TRIR (ENSCHIG00000017848) #18	GET3 (ENSCHIG00000023078) #19	BEST2 (ENSCHIG00000009210) #20	HOOK2 (ENSCHIG00000017730) #21	JUNB (ENSCHIG00000007846) #22	ENSCHIG00000008839 #23	RNASEH2A (ENSCHIG00000014460) #24	RTBDN (ENSCHIG00000018795) #25	MAST1 (ENSCHIG00000012078) #26	DNASE2 (ENSCHIG00000018237) #27	KLF1 (ENSCHIG00000024201) #28	GCDH (ENSCHIG00000008032) #29	SYCE2 (ENSCHIG00000023183)	FARSA (ENSCHIG00000022617) #30	CALR (ENSCHIG00000023446) #31	RAD23A (ENSCHIG00000017626) #32	GADD45GIP1 (ENSCHIG00000017823) #33	NFIX (ENSCHIG00000022384) #35	LYL1 (ENSCHIG00000027128) #36	TRMT1 (ENSCHIG00000013569) #37
Siberian musk deer	MODERN SPECIES	34		ENSMMSG00000016189	ENSMMSG00000016203 ##12	ENSMMSG00000016218 #8	MAN2B1 (ENSMMSG00000016295) #13	ENSMMSG00000016351	WDR83 (ENSMMSG00000016414) #14	DHPS (ENSMMSG00000016482) #15	ENSMMSG00000016585	FBXW9 (ENSMMSG00000016611) #16	TNPO2 (ENSMMSG00000016676) #17	TRIR (ENSMMSG00000016742) #18	GET3 (ENSMMSG00000016786) #19	BEST2 (ENSMMSG00000016855) #20	HOOK2 (ENSMMSG00000016914) #21	JUNB (ENSMMSG00000016968) #22	ENSMMSG00000016984 #23	THSD8 (ENSMMSG00000017010)	RNASEH2A (ENSMMSG00000017025) #24	RTBDN (ENSMMSG00000017054) #25	MAST1 (ENSMMSG00000017118) #26	DNASE2 (ENSMMSG00000017335) #27	KLF1 (ENSMMSG00000017358) #28	GCDH (ENSMMSG00000017382) #29	SYCE2 (ENSMMSG00000017412)	FARSA (ENSMMSG00000017435) #30	ENSMMSG00000017464 #31	RAD23A (ENSMMSG00000017530) #32	GADD45GIP1 (ENSMMSG00000017735) #33	NFIX (ENSMMSG00000017773) #35	LYL1 (ENSMMSG00000017977) #36
Yarkand deer	MODERN SPECIES	32	ENSCHYG00000021460 #8	ENSCHYG00000021432	ENSCHYG00000021396 ##12	ENSCHYG00000021342	MAN2B1 (ENSCHYG00000021233) #13	ENSCHYG00000021159	WDR83 (ENSCHYG00000021020) #14	DHPS (ENSCHYG00000020871) #15	ENSCHYG00000020822	FBXW9 (ENSCHYG00000020520) #16	TNPO2 (ENSCHYG00000020399) #17	TRIR (ENSCHYG00000020314) #18	ENSCHYG00000020173 #19	BEST2 (ENSCHYG00000020079) #20	HOOK2 (ENSCHYG00000019849) #21	JUNB (ENSCHYG00000019794) #22	ENSCHYG00000019679 #23	RNASEH2A (ENSCHYG00000019565) #24	RTBDN (ENSCHYG00000019447) #25	ENSCHYG00000019426	MAST1 (ENSCHYG00000019171) #26	DNASE2 (ENSCHYG00000019086) #27	KLF1 (ENSCHYG00000019002) #28	GCDH (ENSCHYG00000018661) #29	FARSA (ENSCHYG00000018361) #30	ENSCHYG00000017855 #31	GADD45GIP1 (ENSCHYG00000017788) #33	NFIX (ENSCHYG00000016512) #35	LYL1 (ENSCHYG00000016421) #36	TRMT1 (ENSCHYG00000016033) #37	NACC1 (ENSCHYG00000015883)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00390000016735	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT00950000182755.b.a.a.a.a.a.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00940000153523.n	ENSGT00950000183216.d.a.a.b.b	ENSGT00940000163881	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Equus	ANCESTRAL SPECIES	55	ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.b #12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b #35
Donkey	MODERN SPECIES	12	ENSEASG00005029679 #12	ENSEASG00005036541 #8	ENSEASG00005031648 #8	ENSEASG00005004211 #13	WDR83OS (ENSEASG00005036170)	WDR83 (ENSEASG00005004195) #14	DHPS (ENSEASG00005004189) #15	ENSEASG00005024096	FBXW9 (ENSEASG00005004179) #16	TNPO2 (ENSEASG00005004160) #17	TRIR (ENSEASG00005004158) #18	GET3 (ENSEASG00005004153) #19	BEST2 (ENSEASG00005004149) #20	HOOK2 (ENSEASG00005004135) #21	PRDX2 (ENSEASG00005004125) #23	JUNB (ENSEASG00005032517) #22	RNASEH2A (ENSEASG00005004118) #24	RTBDN (ENSEASG00005004115) #25	MAST1 (ENSEASG00005004109) #26	DNASE2 (ENSEASG00005004105) #27	KLF1 (ENSEASG00005004104) #28	GCDH (ENSEASG00005004102) #29	ENSEASG00005034575	FARSA (ENSEASG00005004093) #30	CALR (ENSEASG00005004089) #31	RAD23A (ENSEASG00005004081) #32	GADD45GIP1 (ENSEASG00005035955) #33	DAND5 (ENSEASG00005004075) #34	ENSEASG00005028746	NFIX (ENSEASG00005004061) #35	LYL1 (ENSEASG00005024646) #36
Horse	MODERN SPECIES	28	ENSECAG00000058983 #12	ENSECAG00000045532	ENSECAG00000034536 #8	MAN2B1 (ENSECAG00000022546) #13	WDR83OS (ENSECAG00000058865)	WDR83 (ENSECAG00000019788) #14	DHPS (ENSECAG00000009177) #15	GNG14 (ENSECAG00000008886)	FBXW9 (ENSECAG00000005017) #16	TNPO2 (ENSECAG00000013673) #17	TRIR (ENSECAG00000012154) #18	GET3 (ENSECAG00000007103) #19	BEST2 (ENSECAG00000038067) #20	HOOK2 (ENSECAG00000014343) #21	PRDX2 (ENSECAG00000011541) #23	JUNB (ENSECAG00000003816) #22	RNASEH2A (ENSECAG00000007013) #24	RTBDN (ENSECAG00000001223) #25	MAST1 (ENSECAG00000022473) #26	DNASE2 (ENSECAG00000018970) #27	KLF1 (ENSECAG00000027715) #28	GCDH (ENSECAG00000012495) #29	SYCE2 (ENSECAG00000052051)	FARSA (ENSECAG00000015139) #30	CALR (ENSECAG00000008164)	RAD23A (ENSECAG00000024607) #32	DAND5 (ENSECAG00000024508) #34	GADD45GIP1 (ENSECAG00000003766) #33	ENSECAG00000031092	NFIX (ENSECAG00000019690) #35	LYL1 (ENSECAG00000028699) #36
Chiroptera	ANCESTRAL SPECIES	60				ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Microchiroptera	ANCESTRAL SPECIES	51				ENSGT00950000182755.b.b.b.a ##12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Greater horseshoe bat	MODERN SPECIES	9	ENSRFEG00010021603	ENSRFEG00010021596	ENSRFEG00010021592 ##12	ENSRFEG00010021582 ##12	MAN2B1 (ENSRFEG00010021563) #13	WDR83OS (ENSRFEG00010021544)	WDR83 (ENSRFEG00010021533) #14	DHPS (ENSRFEG00010021515) #15	ENSRFEG00010021496	FBXW9 (ENSRFEG00010021482) #16	TNPO2 (ENSRFEG00010021459) #17	TRIR (ENSRFEG00010021446) #18	GET3 (ENSRFEG00010021439) #19	BEST2 (ENSRFEG00010021431) #20	HOOK2 (ENSRFEG00010021413) #21	JUNB (ENSRFEG00010021403) #22	PRDX2 (ENSRFEG00010021398) #23	THSD8 (ENSRFEG00010021389)	RNASEH2A (ENSRFEG00010021379) #24	ENSRFEG00010021370	RTBDN (ENSRFEG00010021362) #25	MAST1 (ENSRFEG00010021327) #26	DNASE2 (ENSRFEG00010021305) #27	KLF1 (ENSRFEG00010021300) #28	GCDH (ENSRFEG00010021270) #29	SYCE2 (ENSRFEG00010021245)	FARSA (ENSRFEG00010021230) #30	CALR (ENSRFEG00010021212) #31	RAD23A (ENSRFEG00010021198) #32	GADD45GIP1 (ENSRFEG00010021188) #33	DAND5 (ENSRFEG00010021178) #34
Microbat	MODERN SPECIES	1559						WDR83OS (ENSMLUG00000012633)	WDR83 (ENSMLUG00000012637) #14	DHPS (ENSMLUG00000012647) #15	ENSMLUG00000024606	FBXW9 (ENSMLUG00000012655) #16	TNPO2 (ENSMLUG00000012669) #17	TRIR (ENSMLUG00000012689) #18	GET3 (ENSMLUG00000012694) #19	BEST2 (ENSMLUG00000029360) #20	HOOK2 (ENSMLUG00000012699) #21	JUNB (ENSMLUG00000012714) #22	PRDX2 (ENSMLUG00000012718) #23	RNASEH2A (ENSMLUG00000012723) #24	RTBDN (ENSMLUG00000012729) #25	MAST1 (ENSMLUG00000012736) #26	DNASE2 (ENSMLUG00000023519) #27	KLF1 (ENSMLUG00000012751) #28	GCDH (ENSMLUG00000012753) #29	SYCE2 (ENSMLUG00000004284)	FARSA (ENSMLUG00000012767) #30	ENSMLUG00000012776	RAD23A (ENSMLUG00000012783) #32	GADD45GIP1 (ENSMLUG00000012790) #33	NFIX (ENSMLUG00000012794) #35	LYL1 (ENSMLUG00000012805) #36	TRMT1 (ENSMLUG00000012809) #37
Carnivora	ANCESTRAL SPECIES	6	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200
Felidae	ANCESTRAL SPECIES	21	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Panthera	ANCESTRAL SPECIES	15	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Panthera_a	ANCESTRAL SPECIES		ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00870000137755	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
leopard	MODERN SPECIES	110	ENSPPRG00000010480 ##12	ENSPPRG00000010737 ##12	ENSPPRG00000011201 #8	MAN2B1 (ENSPPRG00000013970) #13	WDR83OS (ENSPPRG00000014585)	WDR83 (ENSPPRG00000014810) #14	DHPS (ENSPPRG00000019899) #15	ENSPPRG00000020820	FBXW9 (ENSPPRG00000023858) #16	TNPO2 (ENSPPRG00000003075) #17	TRIR (ENSPPRG00000003329) #18	GET3 (ENSPPRG00000004506) #19	BEST2 (ENSPPRG00000006013) #20	HOOK2 (ENSPPRG00000009042) #21	ENSPPRG00000009177	JUNB (ENSPPRG00000020564) #22	PRDX2 (ENSPPRG00000010246) #23	RNASEH2A (ENSPPRG00000010585) #24	THSD8 (ENSPPRG00000011424)	RTBDN (ENSPPRG00000013084) #25	MAST1 (ENSPPRG00000014214) #26	DNASE2 (ENSPPRG00000015132) #27	KLF1 (ENSPPRG00000016685) #28	GCDH (ENSPPRG00000020586) #29	SYCE2 (ENSPPRG00000021729)	FARSA (ENSPPRG00000000346) #30	CALR (ENSPPRG00000000511) #31	RAD23A (ENSPPRG00000002419) #32	GADD45GIP1 (ENSPPRG00000002575) #33	DAND5 (ENSPPRG00000002664) #34	NFIX (ENSPPRG00000007036) #35
lion	MODERN SPECIES	2	ENSPLOG00000013135 #8	ENSPLOG00000013151 ##12	ENSPLOG00000013164 ##12	ENSPLOG00000013176 ##12	MAN2B1 (ENSPLOG00000013282) #13	WDR83OS (ENSPLOG00000013336)	WDR83 (ENSPLOG00000013379) #14	DHPS (ENSPLOG00000013447) #15	ENSPLOG00000013520	FBXW9 (ENSPLOG00000013556) #16	TNPO2 (ENSPLOG00000013652) #17	TRIR (ENSPLOG00000013712) #18	GET3 (ENSPLOG00000013778) #19	BEST2 (ENSPLOG00000013919) #20	HOOK2 (ENSPLOG00000014055) #21	JUNB (ENSPLOG00000014495) #22	PRDX2 (ENSPLOG00000014517) #23	THSD8 (ENSPLOG00000014622)	RNASEH2A (ENSPLOG00000014659) #24	RTBDN (ENSPLOG00000014688) #25	MAST1 (ENSPLOG00000014769) #26	DNASE2 (ENSPLOG00000015142) #27	KLF1 (ENSPLOG00000015199) #28	GCDH (ENSPLOG00000015264) #29	SYCE2 (ENSPLOG00000015466)	FARSA (ENSPLOG00000015558) #30	CALR (ENSPLOG00000015775) #31	RAD23A (ENSPLOG00000015869) #32	GADD45GIP1 (ENSPLOG00000015943) #33	DAND5 (ENSPLOG00000015976) #34	NFIX (ENSPLOG00000016031) #35
Cat	MODERN SPECIES	1	ACP5 (ENSFCAG00000042335)	ENSFCAG00000039394 ##12	ENSFCAG00000040256 ##12	ENSFCAG00000053819 ##12	MAN2B1 (ENSFCAG00000029528) #13	WDR83OS (ENSFCAG00000000463)	WDR83 (ENSFCAG00000037204) #14	DHPS (ENSFCAG00000000465) #15	GNG14 (ENSFCAG00000021887)	FBXW9 (ENSFCAG00000000466) #16	TNPO2 (ENSFCAG00000000467) #17	TRIR (ENSFCAG00000032147) #18	GET3 (ENSFCAG00000000468) #19	BEST2 (ENSFCAG00000000470) #20	HOOK2 (ENSFCAG00000028846) #21	JUNB (ENSFCAG00000022803) #22	PRDX2 (ENSFCAG00000000473) #23	THSD8 (ENSFCAG00000052414)	RNASEH2A (ENSFCAG00000000474) #24	RTBDN (ENSFCAG00000009941) #25	MAST1 (ENSFCAG00000000475) #26	DNASE2 (ENSFCAG00000000476) #27	KLF1 (ENSFCAG00000026066) #28	GCDH (ENSFCAG00000000477) #29	FARSA (ENSFCAG00000023511) #30	CALR (ENSFCAG00000000479) #31	RAD23A (ENSFCAG00000023315) #32	GADD45GIP1 (ENSFCAG00000034587) #33	DAND5 (ENSFCAG00000043469) #34	NFIX (ENSFCAG00000000481) #35	ENSFCAG00000000482 #36
Caniformia	ANCESTRAL SPECIES	4	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b #35
Canidae	ANCESTRAL SPECIES		ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00960000189551	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404.b #36
Dog	MODERN SPECIES	12	ENSCAFG00845017993 #8	ENSCAFG00845017811	ENSCAFG00845017723 ##12	ENSCAFG00845017657 #8	ENSCAFG00845017174 #13	WDR83OS (ENSCAFG00845016928)	WDR83 (ENSCAFG00845016879) #14	DHPS (ENSCAFG00845016832) #15	GNG14 (ENSCAFG00845016787)	FBXW9 (ENSCAFG00845016738) #16	TNPO2 (ENSCAFG00845016346) #17	TRIR (ENSCAFG00845016276) #18	GET3 (ENSCAFG00845016222) #19	BEST2 (ENSCAFG00845016163) #20	HOOK2 (ENSCAFG00845016033) #21	JUNB (ENSCAFG00845015989) #22	PRDX2 (ENSCAFG00845015946) #23	RNASEH2A (ENSCAFG00845015846) #24	RTBDN (ENSCAFG00845015774) #25	MAST1 (ENSCAFG00845015670) #26	DNASE2 (ENSCAFG00845015604) #27	KLF1 (ENSCAFG00845015569) #28	GCDH (ENSCAFG00845015478) #29	SYCE2 (ENSCAFG00845015391)	FARSA (ENSCAFG00845015291) #30	CALR (ENSCAFG00845015220) #31	RAD23A (ENSCAFG00845015161) #32	GADD45GIP1 (ENSCAFG00845015125) #33	DAND5 (ENSCAFG00845015107) #34	NFIX (ENSCAFG00845030565) #35	ENSCAFG00845030516 #36
Dingo	MODERN SPECIES	112	ENSCAFG00020005044 #8	ENSCAFG00020005065 ##12	ENSCAFG00020005082 ##12	ENSCAFG00020005083 #8	MAN2B1 (ENSCAFG00020005086) #13	WDR83OS (ENSCAFG00020005096)	WDR83 (ENSCAFG00020005098) #14	DHPS (ENSCAFG00020005102) #15	ENSCAFG00020005105	FBXW9 (ENSCAFG00020005110) #16	TNPO2 (ENSCAFG00020005115) #17	TRIR (ENSCAFG00020005142) #18	GET3 (ENSCAFG00020005145) #19	BEST2 (ENSCAFG00020005167) #20	HOOK2 (ENSCAFG00020005171) #21	JUNB (ENSCAFG00020005176) #22	PRDX2 (ENSCAFG00020005178) #23	RNASEH2A (ENSCAFG00020005190) #24	RTBDN (ENSCAFG00020005198) #25	MAST1 (ENSCAFG00020005207) #26	DNASE2 (ENSCAFG00020005295) #27	KLF1 (ENSCAFG00020005300) #28	GCDH (ENSCAFG00020005305) #29	ENSCAFG00020005308	FARSA (ENSCAFG00020005315) #30	CALR (ENSCAFG00020005320) #31	RAD23A (ENSCAFG00020005332) #32	GADD45GIP1 (ENSCAFG00020005337) #33	DAND5 (ENSCAFG00020005339) #34	NFIX (ENSCAFG00020005352) #35	LYL1 (ENSCAFG00020005371) #36
Red fox	MODERN SPECIES	182	ENSVVUG00000023812	ENSVVUG00000023816	ENSVVUG00000023817 ##12	ENSVVUG00000023819 #8	MAN2B1 (ENSVVUG00000023820) #13	WDR83OS (ENSVVUG00000023828)	WDR83 (ENSVVUG00000023830) #14	DHPS (ENSVVUG00000023833) #15	GNG14 (ENSVVUG00000023838)	FBXW9 (ENSVVUG00000023840) #16	TNPO2 (ENSVVUG00000023860) #17	TRIR (ENSVVUG00000024113) #18	ASNA1 (ENSVVUG00000024118) #19	BEST2 (ENSVVUG00000024122) #20	HOOK2 (ENSVVUG00000024128) #21	JUNB (ENSVVUG00000024130) #22	PRDX2 (ENSVVUG00000024132) #23	ENSVVUG00000024133	RTBDN (ENSVVUG00000024134) #25	MAST1 (ENSVVUG00000024135) #26	DNASE2 (ENSVVUG00000024141) #27	KLF1 (ENSVVUG00000024142) #28	GCDH (ENSVVUG00000024143) #29	ENSVVUG00000024144	FARSA (ENSVVUG00000024145) #30	CALR (ENSVVUG00000024147) #31	RAD23A (ENSVVUG00000024155) #32	GADD45GIP1 (ENSVVUG00000024166) #33	DAND5 (ENSVVUG00000024168) #34	NFIX (ENSVVUG00000024169) #35	ENSVVUG00000024173
Caniformia_b	DUPLICATION
Caniformia_b	ANCESTRAL SPECIES																	ENSGT00940000161195.c #22
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000161195.c #22
Ursus	ANCESTRAL SPECIES	91				ENSGT00950000182755.b.a.a.a.a.a.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195.c #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36	ENSGT00530000063646.b #37
American black bear	MODERN SPECIES	1490				ENSUAMG00000019652 #12	MAN2B1 (ENSUAMG00000019650) #13	WDR83OS (ENSUAMG00000019649)	WDR83 (ENSUAMG00000019628) #14	DHPS (ENSUAMG00000019627) #15	ENSUAMG00000019626	FBXW9 (ENSUAMG00000019625) #16	TNPO2 (ENSUAMG00000019621) #17	TRIR (ENSUAMG00000019618) #18	GET3 (ENSUAMG00000019617) #19	BEST2 (ENSUAMG00000019615) #20	HOOK2 (ENSUAMG00000019611) #21	ENSUAMG00000019609 #22	PRDX2 (ENSUAMG00000019605) #23	RNASEH2A (ENSUAMG00000019593) #24
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195.d #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b #35
Ursidae	ANCESTRAL SPECIES	20	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.b #12	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195.d #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b #35
Ursus	ANCESTRAL SPECIES																	ENSGT00940000161195.d #22
American black bear	MODERN SPECIES	1491																ENSUAMG00000019653 #22
Giant Panda	MODERN SPECIES	14	ENSAMEG00000029315 #8	ENSAMEG00000011689 ##12	ENSAMEG00000012006 ##12	ENSAMEG00000025321 ##12	MAN2B1 (ENSAMEG00000012013) #13	WDR83OS (ENSAMEG00000024064)	WDR83 (ENSAMEG00000012090) #14	DHPS (ENSAMEG00000012097) #15	ENSAMEG00000012105	FBXW9 (ENSAMEG00000012106) #16	TNPO2 (ENSAMEG00000012123) #17	TRIR (ENSAMEG00000012192) #18	GET3 (ENSAMEG00000012198) #19	BEST2 (ENSAMEG00000012212) #20	HOOK2 (ENSAMEG00000012234) #21	JUNB (ENSAMEG00000012298) #22	PRDX2 (ENSAMEG00000012307) #23	RNASEH2A (ENSAMEG00000028673) #24	RTBDN (ENSAMEG00000012347) #25	MAST1 (ENSAMEG00000012351) #26	DNASE2 (ENSAMEG00000012396) #27	KLF1 (ENSAMEG00000027076) #28	GCDH (ENSAMEG00000012411) #29	SYCE2 (ENSAMEG00000012442)	FARSA (ENSAMEG00000012446) #30	ENSAMEG00000012487 #31	RAD23A (ENSAMEG00000012527) #32	GADD45GIP1 (ENSAMEG00000012565) #33	DAND5 (ENSAMEG00000012568) #34	ENSAMEG00000012569 #35	ENSAMEG00000027765
Mustelinae	ANCESTRAL SPECIES	45	ENSGT00950000182755.b.a.a.a.a.a.a.b.i #8	ENSGT00950000182755.b.a.a.a.a.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b ##12	ENSGT00950000182755.b.a.a.a.a.a.a.b.j #8	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195.d #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Ferret	MODERN SPECIES	185	ACP5 (ENSMPUG00000004905)	ENSMPUG00000004901 #8	ENSMPUG00000004896 ##12	ENSMPUG00000004884 ##12	ENSMPUG00000004877 #8	MAN2B1 (ENSMPUG00000004856) #13	WDR83OS (ENSMPUG00000004837)	WDR83 (ENSMPUG00000004831) #14	DHPS (ENSMPUG00000004768) #15	ENSMPUG00000004759	FBXW9 (ENSMPUG00000004689) #16	TNPO2 (ENSMPUG00000004663) #17	TRIR (ENSMPUG00000004652) #18	GET3 (ENSMPUG00000004639) #19	HOOK2 (ENSMPUG00000004624) #21	JUNB (ENSMPUG00000018708) #22	PRDX2 (ENSMPUG00000004591) #23	RNASEH2A (ENSMPUG00000004586) #24	RTBDN (ENSMPUG00000004582) #25	MAST1 (ENSMPUG00000004565) #26	DNASE2 (ENSMPUG00000004550) #27	KLF1 (ENSMPUG00000004544) #28	ENSMPUG00000004535	GCDH (ENSMPUG00000004518) #29	FARSA (ENSMPUG00000004400) #30	CALR (ENSMPUG00000004348) #31	RAD23A (ENSMPUG00000004334) #32	GADD45GIP1 (ENSMPUG00000004344) #33	NFIX (ENSMPUG00000004325) #35	LYL1 (ENSMPUG00000004316) #36	TRMT1 (ENSMPUG00000004210) #37
American mink	MODERN SPECIES	233	PPA5 (ENSNVIG00000003120)	ENSNVIG00000003192 ##12	ENSNVIG00000003199 ##12	ENSNVIG00000003206 ##12	MAN2B1 (ENSNVIG00000003244) #13	WDR83OS (ENSNVIG00000003265)	WDR83 (ENSNVIG00000003299) #14	DHPS (ENSNVIG00000003322) #15	ENSNVIG00000003395	FBXW9 (ENSNVIG00000003405) #16	TNPO2 (ENSNVIG00000003442) #17	TRIR (ENSNVIG00000003597) #18	GET3 (ENSNVIG00000003624) #19	BEST2 (ENSNVIG00000003651) #20	HOOK2 (ENSNVIG00000003702) #21	JUNB (ENSNVIG00000003745) #22	PRDX2 (ENSNVIG00000003765) #23	RNASEH2A (ENSNVIG00000003791) #24	RTBDN (ENSNVIG00000003814) #25	MAST1 (ENSNVIG00000003827) #26	DNASE2 (ENSNVIG00000003902) #27	KLF1 (ENSNVIG00000003918) #28	GCDH (ENSNVIG00000003925) #29	SYCE2 (ENSNVIG00000003941)	FARSA (ENSNVIG00000003979) #30	CALR (ENSNVIG00000004013) #31	RAD23A (ENSNVIG00000004028) #32	ENSNVIG00000004059 #33	DAND5 (ENSNVIG00000004073) #34	NFIX (ENSNVIG00000004082) #35	LYL1 (ENSNVIG00000004114) #36
Atlantogenata	ANCESTRAL SPECIES	41	ENSGT00390000005147	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a.i.b.a #13	ENSGT01030000234638.b.a.a.i.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Afrotheria	ANCESTRAL SPECIES	38	ENSGT00390000005147	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a.i.b.a #13	ENSGT01030000234638.b.a.a.i.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Tenrec	MODERN SPECIES	6457																JUNB (ENSETEG00000008994) #22
Afrotheria_a	ANCESTRAL SPECIES	39	ENSGT00390000005147	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a.i.b.a #13	ENSGT01030000234638.b.a.a.i.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Hyrax	MODERN SPECIES	574							MAN2B1 (ENSPCAG00000014647) #13	WDR83OS (ENSPCAG00000014783)	WDR83 (ENSPCAG00000014813) #14	FBXW9 (ENSPCAG00000014854) #16	TNPO2 (ENSPCAG00000014916) #17	TRIR (ENSPCAG00000015051) #18	GET3 (ENSPCAG00000015072) #19	BEST2 (ENSPCAG00000015104) #20	HOOK2 (ENSPCAG00000015171) #21	JUNB (ENSPCAG00000015270) #22	PRDX2 (ENSPCAG00000015277) #23	RNASEH2A (ENSPCAG00000015319) #24	RTBDN (ENSPCAG00000015367) #25	MAST1 (ENSPCAG00000015438) #26	KLF1 (ENSPCAG00000015589) #28	GCDH (ENSPCAG00000015614) #29	SYCE2 (ENSPCAG00000015680)	FARSA (ENSPCAG00000015721) #30	CALR (ENSPCAG00000015789) #31	RAD23A (ENSPCAG00000015877) #32	ENSPCAG00000015945 #33
Elephant	MODERN SPECIES	270	ELOF1 (ENSLAFG00000001534)	ENSLAFG00000032392 #13	ACP5 (ENSLAFG00000030903)	ENSLAFG00000025944	ENSLAFG00000031542	ENSLAFG00000008483 #13	WDR83OS (ENSLAFG00000032207)	WDR83 (ENSLAFG00000031530) #14	DHPS (ENSLAFG00000027105) #15	FBXW9 (ENSLAFG00000026488) #16	TNPO2 (ENSLAFG00000003661) #17	TRIR (ENSLAFG00000011724) #18	GET3 (ENSLAFG00000011727) #19	BEST2 (ENSLAFG00000032080) #20	HOOK2 (ENSLAFG00000021382) #21	JUNB (ENSLAFG00000008530) #22	PRDX2 (ENSLAFG00000008526) #23	RNASEH2A (ENSLAFG00000015571) #24	RTBDN (ENSLAFG00000016111) #25	MAST1 (ENSLAFG00000016119) #26	DNASE2 (ENSLAFG00000016136) #27	KLF1 (ENSLAFG00000016145) #28	GCDH (ENSLAFG00000016147) #29	ENSLAFG00000027765	FARSA (ENSLAFG00000016154) #30	CALR (ENSLAFG00000016157) #31	RAD23A (ENSLAFG00000029782) #32	GADD45GIP1 (ENSLAFG00000027811) #33	DAND5 (ENSLAFG00000002928) #34	NFIX (ENSLAFG00000017040) #35	LYL1 (ENSLAFG00000005235) #36
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000161195 #22
Armadillo	MODERN SPECIES	221																JUNB (ENSDNOG00000013767) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Opossum	MODERN SPECIES	2	CNN1 (ENSMODG00000006688)	ELOF1 (ENSMODG00000006691)	ACP5 (ENSMODG00000006705)	MAN2B1 (ENSMODG00000050551) #13	WDR83OS (ENSMODG00000045969)	WDR83 (ENSMODG00000006785) #14	ENSMODG00000006807 #15	ENSMODG00000044399	FBXW9 (ENSMODG00000006836) #16	TNPO2 (ENSMODG00000006888) #17	ENSMODG00000006894	TRIR (ENSMODG00000025628) #18	GET3 (ENSMODG00000006913) #19	BEST2 (ENSMODG00000006822) #20	HOOK2 (ENSMODG00000006959) #21	JUNB (ENSMODG00000044926) #22	PRDX2 (ENSMODG00000006978) #23	RNASEH2A (ENSMODG00000006997) #24	ENSMODG00000010616	ENSMODG00000029040 #25	ENSMODG00000000019	ENSMODG00000027916	ENSMODG00000027533	LYNX1 (ENSMODG00000029659)	LYPD2 (ENSMODG00000000038)	ENSMODG00000039273	ENSMODG00000024365	THEM6 (ENSMODG00000000042)	JRK (ENSMODG00000024367)	ARC (ENSMODG00000000033)	ENSMODG00000000048
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a.g #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856.b #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Diprotodontia	ANCESTRAL SPECIES	20	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a.g #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856.b #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00940000159680	ENSGT00390000000053	ENSGT00390000016735	ENSGT01030000234638.b.a.a.g #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00390000002634.a #27	ENSGT00940000161856.b #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00390000013719 #33	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00940000162404 #36
koala	MODERN SPECIES	58	CNN1 (ENSPCIG00000017820)	ELOF1 (ENSPCIG00000017821)	ACP5 (ENSPCIG00000014525)	MAN2B1 (ENSPCIG00000015894) #13	WDR83OS (ENSPCIG00000015902)	WDR83 (ENSPCIG00000015889) #14	DHPS (ENSPCIG00000015878) #15	ENSPCIG00000015871	FBXW9 (ENSPCIG00000015866) #16	TNPO2 (ENSPCIG00000015327) #17	ENSPCIG00000015303	TRIR (ENSPCIG00000015300) #18	GET3 (ENSPCIG00000015293) #19	BEST2 (ENSPCIG00000015279) #20	HOOK2 (ENSPCIG00000012585) #21	JUNB (ENSPCIG00000014125) #22	PRDX2 (ENSPCIG00000014122) #23	RNASEH2A (ENSPCIG00000014119) #24	ENSPCIG00000014111 #25	MAST1 (ENSPCIG00000014093) #26	DNASE2 (ENSPCIG00000014087) #27	ENSPCIG00000014086 #28	GCDH (ENSPCIG00000019299) #29	ENSPCIG00000019297	FARSA (ENSPCIG00000019294) #30	CALR (ENSPCIG00000019290) #31	RAD23A (ENSPCIG00000019286) #32	ENSPCIG00000019285 #33	ENSPCIG00000033702 #34	NFIX (ENSPCIG00000019280) #35	LYL1 (ENSPCIG00000019276) #36
Common wonbat	MODERN SPECIES	580	CNN1 (ENSVURG00010012276)	ELOF1 (ENSVURG00010012285)	ACP5 (ENSVURG00010012298)	MAN2B1 (ENSVURG00010012315) #13	WDR83OS (ENSVURG00010012335)	WDR83 (ENSVURG00010012342) #14	DHPS (ENSVURG00010012351) #15	ENSVURG00010012367	FBXW9 (ENSVURG00010012393) #16	TNPO2 (ENSVURG00010012404) #17	ENSVURG00010012419	TRIR (ENSVURG00010012422) #18	GET3 (ENSVURG00010012428) #19	BEST2 (ENSVURG00010012432) #20	HOOK2 (ENSVURG00010012454) #21	JUNB (ENSVURG00010012482) #22	PRDX2 (ENSVURG00010012491) #23	RNASEH2A (ENSVURG00010012512) #24	ENSVURG00010012521	ENSVURG00010012528 #26	ENSVURG00010012540 #26	DNASE2 (ENSVURG00010012555) #27	ENSVURG00010012587 #28	GCDH (ENSVURG00010012611) #29	FARSA (ENSVURG00010012630) #30	CALR (ENSVURG00010012640) #31	RAD23A (ENSVURG00010012654) #32	GADD45GIP1 (ENSVURG00010012667) #33	ENSVURG00010012675 #34	NFIX (ENSVURG00010012686) #35	LYL1 (ENSVURG00010012714) #36
Tasmanian devil	MODERN SPECIES		ELAVL3 (ENSSHAG00000005583)	ZNF653 (ENSSHAG00000023239)	CNN1 (ENSSHAG00000004625)	ELOF1 (ENSSHAG00000021916)	ACP5 (ENSSHAG00000026583)	MAN2B1 (ENSSHAG00000015955) #13	WDR83 (ENSSHAG00000015933) #14	DHPS (ENSSHAG00000024479) #15	TNPO2 (ENSSHAG00000028738) #17	ENSSHAG00000022042	FBXW9 (ENSSHAG00000015858) #16	ENSSHAG00000021974	GET3 (ENSSHAG00000015720) #19	BEST2 (ENSSHAG00000015677) #20	HOOK2 (ENSSHAG00000015654) #21	JUNB (ENSSHAG00000031673) #22	PRDX2 (ENSSHAG00000015596) #23	RNASEH2A (ENSSHAG00000021970) #24	ENSSHAG00000029919	MAST1 (ENSSHAG00000015366) #26	ENSSHAG00000027697 #28	GCDH (ENSSHAG00000015183) #29	ENSSHAG00000015176	FARSA (ENSSHAG00000015006) #30	CALR (ENSSHAG00000022448) #31	RAD23A (ENSSHAG00000014944) #32	GADD45GIP1 (ENSSHAG00000030763) #33	ENSSHAG00000031388	NFIX (ENSSHAG00000014449) #35	ENSSHAG00000030868 #36	TRMT1 (ENSSHAG00000014381) #37
Platypus	MODERN SPECIES	85	ECSIT (ENSOANG00000001370)	CNN1 (ENSOANG00000040470)	ELOF1 (ENSOANG00000011944)	ACP5 (ENSOANG00000013181)	MAN2B1 (ENSOANG00000040037) #13	WDR83OS (ENSOANG00000013178)	WDR83 (ENSOANG00000013177) #14	ENSOANG00000013176 #15	ENSOANG00000039942	FBXW9 (ENSOANG00000042722) #16	TNPO2 (ENSOANG00000010051) #17	ENSOANG00000049168 #18	GET3 (ENSOANG00000007648) #19	BEST2 (ENSOANG00000045815) #20	HOOK2 (ENSOANG00000014251) #21	JUNB (ENSOANG00000007596) #22	PRDX2 (ENSOANG00000009080) #23	ENSOANG00000009787 #26	ENSOANG00000007093 #27	ENSOANG00000047645 #28	GCDH (ENSOANG00000009077) #29	FARSA (ENSOANG00000043112) #30	CALR (ENSOANG00000009799) #31	RAD23A (ENSOANG00000040687) #32	GADD45GIP1 (ENSOANG00000045483) #33	NFIX (ENSOANG00000047105) #35	LYL1 (ENSOANG00000006846) #36	NACC1 (ENSOANG00000006845)	IER2 (ENSOANG00000041821)	CACNA1A (ENSOANG00000012652)	ENSOANG00000040676
Sauria	ANCESTRAL SPECIES	22	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b #37	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00940000164623.C	ENSGT00940000164108.a	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33
Lepidosauria	ANCESTRAL SPECIES	11											ENSGT00420000029753.b	ENSGT00390000015318	ENSGT00940000158629	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000155705.b	ENSGT00940000156259.b	ENSGT00940000158851	ENSGT00530000063632.A	ENSGT00530000063790.a	ENSGT00940000156897	ENSGT00390000015908	ENSGT00390000003860	ENSGT00940000153665.b.a.b	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.a.b
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a #13	ENSGT00530000063646.b #37	ENSGT00940000159327	ENSGT00940000163101	ENSGT00900000141021.b.b.d	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139	ENSGT00940000159349	ENSGT00940000179707	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00390000009693	ENSGT00940000159531	ENSGT00940000154245.A	ENSGT00940000156722	ENSGT00940000159136	ENSGT00940000156685
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a #13	ENSGT00530000063646.b #37	ENSGT00940000159327	ENSGT00940000163101	ENSGT00900000141021.b.b.d	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139	ENSGT00940000159349	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00390000009693	ENSGT00940000159531	ENSGT00940000154245.A	ENSGT00940000156722	ENSGT00940000159136	ENSGT00940000156685	ENSGT00940000154726
Common wall lizard	MODERN SPECIES	10	CACNA1A (ENSPMRG00000008615)	MAN2B1 (ENSPMRG00000010644) #13	TRMT1 (ENSPMRG00000010678) #37	NACC1 (ENSPMRG00000010691)	STX10 (ENSPMRG00000010697)	IER2 (ENSPMRG00000010701)	ENSPMRG00000010703	WDR83 (ENSPMRG00000010708) #14	FBXW9 (ENSPMRG00000010713) #16	TNPO2 (ENSPMRG00000010718) #17	ENSPMRG00000010732	TRIR (ENSPMRG00000010734) #18	GET3 (ENSPMRG00000010741) #19	BEST2 (ENSPMRG00000010746) #20	HOOK2 (ENSPMRG00000010757) #21	JUNB (ENSPMRG00000010774) #22	ENSPMRG00000010777	PRDX2 (ENSPMRG00000010782) #23	RNASEH2A (ENSPMRG00000010800) #24	ENSPMRG00000010809 #25	TTC1 (ENSPMRG00000010829)	PWWP2A (ENSPMRG00000010860)	ENSPMRG00000010862	FABP6 (ENSPMRG00000010865)	CCNJL (ENSPMRG00000010868)	C1QTNF2 (ENSPMRG00000010872)	SLU7 (ENSPMRG00000010877)	ENSPMRG00000010883	ATP10B (ENSPMRG00000010905)	GABRB2 (ENSPMRG00000011033)	GABRA6 (ENSPMRG00000011045)
Argentine black and white tegu	MODERN SPECIES	1	ENSSMRG00000004469	MAN2B1 (ENSSMRG00000004416) #13	TRMT1 (ENSSMRG00000004401) #37	NACC1 (ENSSMRG00000004373)	STX10 (ENSSMRG00000004371)	IER2 (ENSSMRG00000004370)	WDR83OS (ENSSMRG00000004362)	WDR83 (ENSSMRG00000004361) #14	FBXW9 (ENSSMRG00000004357) #16	TNPO2 (ENSSMRG00000004344) #17	ENSSMRG00000004342	TRIR (ENSSMRG00000004338) #18	GET3 (ENSSMRG00000004333) #19	BEST2 (ENSSMRG00000004322) #20	HOOK2 (ENSSMRG00000004311) #21	JUNB (ENSSMRG00000004310) #22	PRDX2 (ENSSMRG00000004309) #23	RNASEH2A (ENSSMRG00000004307) #24	ENSSMRG00000004305 #25	TTC1 (ENSSMRG00000004302)	PWWP2A (ENSSMRG00000004300)	FABP6 (ENSSMRG00000004297)	CCNJL (ENSSMRG00000004294)	C1QTNF2 (ENSSMRG00000004274)	SLU7 (ENSSMRG00000004269)	ENSSMRG00000004264	ATP10B (ENSSMRG00000003645)	ENSSMRG00000003642	GABRB2 (ENSSMRG00000003635)	GABRA6 (ENSSMRG00000003628)	GABRA1 (ENSSMRG00000003623)
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a #13	ENSGT00530000063646.b #37	ENSGT00940000159327	ENSGT00940000163101	ENSGT00900000141021.b.b.d	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139	ENSGT00940000159349	ENSGT00940000179707	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00390000009693	ENSGT00940000159531	ENSGT00940000154245.A	ENSGT00940000156722	ENSGT00940000159136	ENSGT00940000156685
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a #13	ENSGT00530000063646.b #37	ENSGT00940000159327	ENSGT00940000163101	ENSGT00900000141021.b.b.d	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139	ENSGT00940000159349	ENSGT00940000179707	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00390000009693	ENSGT01010000230014	ENSGT00940000159531.fb.a	ENSGT00940000159531.gb	ENSGT00940000154245.A	ENSGT00940000159136
Indian cobra	MODERN SPECIES	1	CACNA1A (ENSNNAG00000004323)	MAN2B1 (ENSNNAG00000003915) #13	TRMT1 (ENSNNAG00000003347) #37	NACC1 (ENSNNAG00000003310)	STX10 (ENSNNAG00000003280)	IER2 (ENSNNAG00000003270)	WDR83OS (ENSNNAG00000003263)	WDR83 (ENSNNAG00000003258) #14	FBXW9 (ENSNNAG00000003236) #16	TNPO2 (ENSNNAG00000003146) #17	ENSNNAG00000003114	TRIR (ENSNNAG00000003106) #18	GET3 (ENSNNAG00000003094) #19	BEST2 (ENSNNAG00000003074) #20	HOOK2 (ENSNNAG00000003053) #21	JUNB (ENSNNAG00000003045) #22	PRDX2 (ENSNNAG00000003037) #23	RNASEH2A (ENSNNAG00000003023) #24	TTC1 (ENSNNAG00000003009)	PWWP2A (ENSNNAG00000003001)	FABP6 (ENSNNAG00000002991)	CCNJL (ENSNNAG00000002979)	ENSNNAG00000002969	C1QTNF2 (ENSNNAG00000002961)	SLU7 (ENSNNAG00000002946)	ENSNNAG00000002934	ATP10B (ENSNNAG00000002917)	ENSNNAG00000002906	GABRB2 (ENSNNAG00000002885)	GABRA1 (ENSNNAG00000002866)	GABRG2 (ENSNNAG00000002724)
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a #13	ENSGT00530000063646.b #37	ENSGT00940000159327	ENSGT00940000163101	ENSGT00900000141021.b.b.d	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139	ENSGT00940000159349	ENSGT00940000179707	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00390000009693	ENSGT01010000230014	ENSGT00940000159531.fb.a	ENSGT00940000159531.gb	ENSGT00940000154245.A	ENSGT00940000159136
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a #13	ENSGT00530000063646.b #37	ENSGT00940000159327	ENSGT00940000163101	ENSGT00900000141021.b.b.d	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817.bb #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139	ENSGT00940000159349	ENSGT00940000179707	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00390000009693	ENSGT00940000159531.fb.a	ENSGT00940000159531.gb	ENSGT00940000154245.A	ENSGT00940000159136	ENSGT00940000156685
Eastern brown snake	MODERN SPECIES	6	MAN2B1 (ENSPTXG00000007879) #13	TRMT1 (ENSPTXG00000007880) #37	NACC1 (ENSPTXG00000007881)	STX10 (ENSPTXG00000007882)	ENSPTXG00000007883	IER2 (ENSPTXG00000007884)	WDR83OS (ENSPTXG00000007885)	WDR83 (ENSPTXG00000007886) #14	FBXW9 (ENSPTXG00000007888) #16	TNPO2 (ENSPTXG00000007892) #17	ENSPTXG00000007898	TRIR (ENSPTXG00000007900) #18	GET3 (ENSPTXG00000007901) #19	BEST2 (ENSPTXG00000007902) #20	HOOK2 (ENSPTXG00000007904) #21	JUNB (ENSPTXG00000007907) #22	PRDX2 (ENSPTXG00000007908) #23	RNASEH2A (ENSPTXG00000007909) #24	ENSPTXG00000007911 #25	TTC1 (ENSPTXG00000007912)	PWWP2A (ENSPTXG00000007913)	FABP6 (ENSPTXG00000007917)	CCNJL (ENSPTXG00000007921)	C1QTNF2 (ENSPTXG00000007923)	SLU7 (ENSPTXG00000007924)	ENSPTXG00000007926	ATP10B (ENSPTXG00000007936)	ENSPTXG00000007941	GABRB2 (ENSPTXG00000007944)	GABRA1 (ENSPTXG00000007948)	GABRG2 (ENSPTXG00000007952)
Blue-lipped sea krait	MODERN SPECIES	4195																JUNB (ENSLLTG00000012847) #22
Lizard	MODERN SPECIES	900	ENSACAG00000045263	ENSACAG00000003913 #13	TRMT1 (ENSACAG00000003825) #37	NACC1 (ENSACAG00000003808)	STX10 (ENSACAG00000003807)	IER2 (ENSACAG00000041275)	WDR83OS (ENSACAG00000003794)	WDR83 (ENSACAG00000003772) #14	FBXW9 (ENSACAG00000003732) #16	TNPO2 (ENSACAG00000003576) #17	ENSACAG00000003560	TRIR (ENSACAG00000003556) #18	GET3 (ENSACAG00000025550) #19	BEST2 (ENSACAG00000003499) #20	HOOK2 (ENSACAG00000003428) #21	JUNB (ENSACAG00000022758) #22	PRDX2 (ENSACAG00000003382) #23	RNASEH2A (ENSACAG00000003338) #24	ENSACAG00000013645 #25	ENSACAG00000034730	ENSACAG00000041562	PWWP2A (ENSACAG00000003282)	FABP6 (ENSACAG00000003260)	CCNJL (ENSACAG00000003244)	C1QTNF2 (ENSACAG00000003238)	SLU7 (ENSACAG00000003144)	pttg1 (ENSACAG00000038565)	ENSACAG00000041795	ATP10B (ENSACAG00000006180)	ENSACAG00000036703
tuatara	MODERN SPECIES	285																JUNB (ENSSPUG00000015461) #22	PRDX2 (ENSSPUG00000015434) #23	ENSSPUG00000015420	CNN1 (ENSSPUG00000015411)	ENSSPUG00000015395	ACP5 (ENSSPUG00000015275)
Archelosauria	ANCESTRAL SPECIES	28	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b #37	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00940000164623.C	ENSGT00940000164108.a	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33
Cryptodira	ANCESTRAL SPECIES	39	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00740000116213	ENSGT00390000003464	ENSGT00390000018130.b	ENSGT00940000154277.a.b	ENSGT00940000156539	ENSGT00390000016650	ENSGT00940000167241	ENSGT00420000029753.b	ENSGT00390000015318	ENSGT00940000158629	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00940000164623.C	ENSGT00940000164108.a	ENSGT00390000002634.a #27	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a #31	ENSGT00390000012078.a.b #32	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33
Testudinoidea	ANCESTRAL SPECIES	38	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b #37	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24
Testudinidae	ANCESTRAL SPECIES	41	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b #37	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24
Abingdon island giant tortoise	MODERN SPECIES	2622	NACC1 (ENSCABG00000010194)	TRMT1 (ENSCABG00000010193) #37	MAN2B1 (ENSCABG00000010192) #13	ENSCABG00000010190 #14	WDR83OS (ENSCABG00000010187)	DHPS (ENSCABG00000010139) #15	ENSCABG00000010131	FBXW9 (ENSCABG00000010128) #16	TNPO2 (ENSCABG00000010122) #17	ENSCABG00000010120	TRIR (ENSCABG00000010118) #18	GET3 (ENSCABG00000010117) #19	ENSCABG00000010116	BEST2 (ENSCABG00000010115) #20	HOOK2 (ENSCABG00000010114) #21	JUNB (ENSCABG00000010113) #22	PRDX2 (ENSCABG00000010112) #23	RNASEH2A (ENSCABG00000010111) #24	ENSCABG00000010110 #25	MAST1 (ENSCABG00000010109) #26
Goode s thornscrub tortoise	MODERN SPECIES	152	STX10 (ENSGEVG00005018902)	NACC1 (ENSGEVG00005018916)	TRMT1 (ENSGEVG00005018931) #37	MAN2B1 (ENSGEVG00005018951) #13	WDR83OS (ENSGEVG00005018973)	WDR83 (ENSGEVG00005018986) #14	DHPS (ENSGEVG00005019003) #15	ENSGEVG00005019028	FBXW9 (ENSGEVG00005019042) #16	TNPO2 (ENSGEVG00005019053) #17	ENSGEVG00005019076	TRIR (ENSGEVG00005019081) #18	GET3 (ENSGEVG00005019088) #19	BEST2 (ENSGEVG00005019104) #20	HOOK2 (ENSGEVG00005019137) #21	JUNB (ENSGEVG00005019155) #22	PRDX2 (ENSGEVG00005019161) #23	RNASEH2A (ENSGEVG00005019166) #24	ENSGEVG00005019178 #25	ENSGEVG00005019190 #26	ENSGEVG00005019202 #26	ENSGEVG00005019218	DNASE2 (ENSGEVG00005019228) #27	KLF1 (ENSGEVG00005019235) #28	GCDH (ENSGEVG00005019243) #29	ENSGEVG00005019250	FARSA (ENSGEVG00005019260) #30	CALR (ENSGEVG00005019273) #31	RAD23A (ENSGEVG00005019280) #32	ENSGEVG00005019296	GADD45GIP1 (ENSGEVG00005019331) #33
Emydidae	ANCESTRAL SPECIES	48	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b #37	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT01100000263497.E.a.a	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00940000161856 #28	ENSGT00940000158116 #29	ENSGT00390000004872	ENSGT00940000163154.B.e.b.d.a	ENSGT00390000006387 #30	ENSGT00950000182915.b.b.a.a.b #31	ENSGT00390000012078.a.b #32	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.b #35	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680
painted turtle	MODERN SPECIES	2403	STX10 (ENSCPBG00000023860)	NACC1 (ENSCPBG00000023862)	TRMT1 (ENSCPBG00000023866) #37	MAN2B1 (ENSCPBG00000023871) #13	WDR83OS (ENSCPBG00000023872)	ENSCPBG00000023873 #14	DHPS (ENSCPBG00000023877) #15	ENSCPBG00000023879	FBXW9 (ENSCPBG00000023887) #16	TNPO2 (ENSCPBG00000023892) #17	ENSCPBG00000023900	TRIR (ENSCPBG00000023902) #18	GET3 (ENSCPBG00000023903) #19	BEST2 (ENSCPBG00000023904) #20	HOOK2 (ENSCPBG00000023905) #21	JUNB (ENSCPBG00000023907) #22	PRDX2 (ENSCPBG00000023908) #23	RNASEH2A (ENSCPBG00000023909) #24	ENSCPBG00000023910 #25	MAST1 (ENSCPBG00000023911) #26	GCDH (ENSCPBG00000023912) #29	SYCE2 (ENSCPBG00000023913)	ENSCPBG00000023914	FARSA (ENSCPBG00000023915) #30	ENSCPBG00000023916	RAD23A (ENSCPBG00000023930) #32	ENSCPBG00000023933	GADD45GIP1 (ENSCPBG00000023940) #33	NFIX (ENSCPBG00000023946) #35	ACP5 (ENSCPBG00000023952)	ELOF1 (ENSCPBG00000023953)
Chinese turtle	MODERN SPECIES	181						ENSPSIG00000006121	ENSPSIG00000006881	WDR83OS (ENSPSIG00000008145)	WDR83 (ENSPSIG00000008218) #14	DHPS (ENSPSIG00000009859) #15	FBXW9 (ENSPSIG00000009970) #16	TNPO2 (ENSPSIG00000010215) #17	ENSPSIG00000012015	GET3 (ENSPSIG00000012030) #19	ENSPSIG00000000707	JUNB (ENSPSIG00000000714) #22	PRDX2 (ENSPSIG00000012036) #23	RNASEH2A (ENSPSIG00000012039) #24	ENSPSIG00000012044 #25	ENSPSIG00000012165	MAST1 (ENSPSIG00000012191) #26	GCDH (ENSPSIG00000012491) #29	SYCE2 (ENSPSIG00000012696)	FARSA (ENSPSIG00000012701) #30	ENSPSIG00000012928	RAD23A (ENSPSIG00000013229) #32	ENSPSIG00000013785	NFIX (ENSPSIG00000013902) #35
Anura	ANCESTRAL SPECIES	6	ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b #37	ENSGT01030000234638.b.a.a #13	ENSGT00390000002121	ENSGT00940000159016 #14	ENSGT00390000008063 #15	ENSGT00390000006806 #16	ENSGT00940000156708.a.a #17	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000155705.b	ENSGT00940000156259.b	ENSGT00940000158851	ENSGT00530000063632.A	ENSGT00530000063790.a	ENSGT00940000156897	ENSGT00390000015908	ENSGT00390000003860	ENSGT00940000153665.b.a.b	ENSGT00940000161237	ENSGT00940000163316.c	ENSGT00940000155505.a
Leishan spiny toad	MODERN SPECIES	6	PSPN (ENSLLEG00000015735)	ALKBH7 (ENSLLEG00000015770)	TRMT1 (ENSLLEG00000015821) #37	ENSLLEG00000016042 #13	WDR83OS (ENSLLEG00000016451)	WDR83 (ENSLLEG00000016542) #14	DHPS (ENSLLEG00000016722) #15	FBXW9 (ENSLLEG00000017029) #16	ENSLLEG00000017146	TNPO2 (ENSLLEG00000017229) #17	GET3 (ENSLLEG00000018363) #19	TRIR (ENSLLEG00000018682) #18	BEST2 (ENSLLEG00000018793) #20	HOOK2 (ENSLLEG00000018942) #21	ENSLLEG00000019860	JUNB (ENSLLEG00000019884) #22	ENSLLEG00000019922	ENSLLEG00000019999	RNASEH2A (ENSLLEG00000020091) #24	ENSLLEG00000020204 #25	MAST1 (ENSLLEG00000020461) #26	ENSLLEG00000021031	ENSLLEG00000021057	ENSLLEG00000021093	ENSLLEG00000021118	ENSLLEG00000021142 #27	RAB3D (ENSLLEG00000021304)	PLPPR2 (ENSLLEG00000021392)	EPOR (ENSLLEG00000021493)	SWSAP1 (ENSLLEG00000021653)	RGL3 (ENSLLEG00000021695)
Frog	MODERN SPECIES	3	ier2 (ENSXETG00000041552)	stx10 (ENSXETG00000005589)	nacc1 (ENSXETG00000005594)	trmt1 (ENSXETG00000033863) #37	man2b1 (ENSXETG00000005597) #13	wdr83os (ENSXETG00000025826)	wdr83 (ENSXETG00000005598) #14	dhps (ENSXETG00000005599) #15	fbxw9 (ENSXETG00000004770) #16	tnpo2 (ENSXETG00000004771) #17	rnf11.2 (ENSXETG00000004769)	trir (ENSXETG00000004768) #18	get3 (ENSXETG00000004767) #19	best2 (ENSXETG00000025368) #20	hook2 (ENSXETG00000004765) #21	junb (ENSXETG00000034515) #22	prdx2 (ENSXETG00000004763) #23	rnaseh2a (ENSXETG00000004762) #24	rtbdn (ENSXETG00000004761) #25	ENSXETG00000043080	ENSXETG00000044297	mast1 (ENSXETG00000004760) #26	ENSXETG00000040763	thibz (ENSXETG00000007922)	dnase2 (ENSXETG00000007923) #27	epor (ENSXETG00000007924)	swsap1 (ENSXETG00000032165)	plppr2 (ENSXETG00000007925)	rab3d (ENSXETG00000027219)	ENSXETG00000037581	ENSXETG00000042146
Coelacanth	MODERN SPECIES	418	PRKCSH (ENSLACG00000016148)	ODAD3 (ENSLACG00000016002)	ENSLACG00000015250	ENSLACG00000015043	ENSLACG00000014678	PLPPR2 (ENSLACG00000014212)	AP1M2 (ENSLACG00000013909)	CDKN2D (ENSLACG00000013803)	KRI1 (ENSLACG00000013401)	ENSLACG00000013249	ATG4D (ENSLACG00000012770)	MAST1 (ENSLACG00000011873) #26	rtbdn (ENSLACG00000008516) #25	RNASEH2A (ENSLACG00000007789) #24	HOOK2 (ENSLACG00000006401) #21	JUNB (ENSLACG00000001525) #22
Actinopterygii	ANCESTRAL SPECIES	172													ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195 #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00530000063000.a.a.b	ENSGT00950000182923.A	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00940000161143	ENSGT00470000042444	ENSGT00390000005147	ENSGT00940000157140.b.b
Neopterygii	DUPLICATION
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES	86	ENSGT00390000006387 #30	ENSGT00940000160315	ENSGT00940000167287	ENSGT00940000160257	ENSGT00940000164506	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.a.b ##35	ENSGT00390000012078.a.b #32	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00530000063000.a.a.b	ENSGT00940000156887	ENSGT00940000161046	ENSGT00390000005584	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00390000005147	ENSGT00940000161143	ENSGT00470000042444	ENSGT00940000157140.b.b
Spotted gar	MODERN SPECIES	672	rab3db (ENSLOCG00000008126)	epor (ENSLOCG00000008110)	ENSLOCG00000008092	ZNF653 (ENSLOCG00000008078)	tspan35 (ENSLOCG00000008073)	ENSLOCG00000008063	zgc:158403 (ENSLOCG00000008037)	ENSLOCG00000008024 #33	ENSLOCG00000008013	nfixb (ENSLOCG00000007997) ##35	rad23aa (ENSLOCG00000007980) #32	trir (ENSLOCG00000007974) #18	get3 (ENSLOCG00000007957) #19	BEST2 (ENSLOCG00000007943) #20	hook2 (ENSLOCG00000007916) #21	junbb (ENSLOCG00000018297) #22	prdx2 (ENSLOCG00000007904)	rnaseh2a (ENSLOCG00000007890) #24	rtbdn (ENSLOCG00000007879) #25	MAST1 (ENSLOCG00000007853) #26	atg4da (ENSLOCG00000007842)	smarca4a (ENSLOCG00000007820)	LDLR (ENSLOCG00000007795)	ap1m2 (ENSLOCG00000007782)	CDKN2D (ENSLOCG00000007768)	kri1 (ENSLOCG00000007754)	ENSLOCG00000007742	spc24 (ENSLOCG00000007731)	keap1b (ENSLOCG00000007721)	s1pr5b (ENSLOCG00000018296)	fdx2 (ENSLOCG00000007698)
Osteoglossocephalai	ANCESTRAL SPECIES	934																ENSGT00940000161195.a.a #22	ENSGT00940000154277.b.b.b
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	41	ENSGT00940000160315.a	ENSGT00940000167287	ENSGT00940000160257	ENSGT00940000164506.b.b	ENSGT00950000182917.a.b.b.g	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.a.b.a ##35	ENSGT00940000177692	ENSGT00950000182916.a.b.a.a.a.b.a.b.b ##35	ENSGT00390000012078.a.b #32	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817.c #19	ENSGT00940000161361 #20	ENSGT00940000160152.m #21	ENSGT00940000161195.a.a.a #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B.db.a #25	ENSGT00940000157700.a #26	ENSGT00530000063000.a.a.b	ENSGT00940000156887.b	ENSGT00940000154819.a.b.d	ENSGT00940000159089	ENSGT00940000159801.B	ENSGT00940000165948	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a.l	ENSGT00940000161143	ENSGT00470000042444	ENSGT00940000157140.b.b.b
Asian bonytongue	MODERN SPECIES	12	rab3da (ENSSFOG00015031001)	epor (ENSSFOG00015030546)	ENSSFOG00015009247	ENSSFOG00015009276	ENSSFOG00015009288	ENSSFOG00015009317	dand5 (ENSSFOG00015009362) #34	nfixb (ENSSFOG00015009407) ##35	ENSSFOG00015028565	rad23aa (ENSSFOG00015009506) #32	rnf11a (ENSSFOG00015009524)	TRIR (ENSSFOG00015025754) #18	get3 (ENSSFOG00015009554) #19	BEST2 (ENSSFOG00015009584) #20	HOOK2 (ENSSFOG00015009620) #21	JUNB (ENSSFOG00015031678) #22	ENSSFOG00015009666	rnaseh2a (ENSSFOG00015009692) #24	rtbdn (ENSSFOG00015009745) #25	MAST1 (ENSSFOG00015009789) #26	atg4da (ENSSFOG00015009908)	SMARCA4 (ENSSFOG00015009921)	ENSSFOG00015010040	ap1m2 (ENSSFOG00015010047)	CDKN2D (ENSSFOG00015010093)	ENSSFOG00015010119	keap1b (ENSSFOG00015010140)	ENSSFOG00015010170	fdx2 (ENSSFOG00015030952)	ENSSFOG00015010183	foxd7 (ENSSFOG00015010194)
P. kingsleyae	MODERN SPECIES	45	ENSPKIG00000008942	cnn1a (ENSPKIG00000008965)	elof1 (ENSPKIG00000008991)	pld6 (ENSPKIG00000009005)	rab3da (ENSPKIG00000009021)	epor (ENSPKIG00000009064)	ENSPKIG00000009117	dand5 (ENSPKIG00000009143) #34	nfixb (ENSPKIG00000009239) ##35	rad23aa (ENSPKIG00000009389) #32	rnf11a (ENSPKIG00000009428)	TRIR (ENSPKIG00000009548) #18	get3 (ENSPKIG00000009567) #19	BEST2 (ENSPKIG00000009609) #20	HOOK2 (ENSPKIG00000009652) #21	JUNB (ENSPKIG00000009704) #22	PRDX2 (ENSPKIG00000009726) #23	rnaseh2a (ENSPKIG00000009756) #24	rtbdn (ENSPKIG00000009782) #25	MAST1 (ENSPKIG00000009888) #26	atg4da (ENSPKIG00000010015)	SMARCA4 (ENSPKIG00000010087)	ENSPKIG00000010225	ap1m2 (ENSPKIG00000010279)	CDKN2D (ENSPKIG00000010335)	ENSPKIG00000010349	keap1b (ENSPKIG00000010365)	ENSPKIG00000010381	fdx2 (ENSPKIG00000010398)	zglp1 (ENSPKIG00000010420)	ENSPKIG00000010442
Osteoglossiformes	ANCESTRAL SPECIES	64														ENSGT00390000003817.d #19	ENSGT00940000160152.n #21	ENSGT00940000161195.a.a.b #22	ENSGT00940000154277.b.b.b	ENSGT00950000183144.B.db.b #25	ENSGT00940000157700.b #26	ENSGT00950000182923.A.s	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.k	ENSGT00940000157140.b.b.a	ENSGT00940000157805	ENSGT00640000091519	ENSGT01050000244824.G	ENSGT00940000155729	ENSGT00940000156865.b
Asian bonytongue	MODERN SPECIES	18	elof1 (ENSSFOG00015031713)	tmem205 (ENSSFOG00015028018)	rab3db (ENSSFOG00015026404)	epor (ENSSFOG00015030139)	ENSSFOG00015014555	ZNF653 (ENSSFOG00015014543)	tspan35 (ENSSFOG00015014521)	ENSSFOG00015014503	dhps (ENSSFOG00015028198) #15	zgc:158403 (ENSSFOG00015014474)	GADD45GIP1 (ENSSFOG00015024648) #33	nfixb (ENSSFOG00015014321) ##35	trir (ENSSFOG00015028164) #18	get3 (ENSSFOG00015027208) #19	HOOK2 (ENSSFOG00015014239) #21	junbb (ENSSFOG00015009655) #22	ENSSFOG00015014054	rtbdn (ENSSFOG00015014018) #25	MAST1 (ENSSFOG00015013958) #26	ENSSFOG00015013947	smarca4a (ENSSFOG00015013823)	ldlra (ENSSFOG00015013750)	CDKN2D (ENSSFOG00015032731)	kri1 (ENSSFOG00015013646)	spc24 (ENSSFOG00015013634)	S1PR5 (ENSSFOG00015024243)	ENSSFOG00015013623	foxred2 (ENSSFOG00015013582)	mcm5 (ENSSFOG00015013517)	ENSSFOG00015013478	gcat (ENSSFOG00015013409)
P. kingsleyae	MODERN SPECIES	305													trir (ENSPKIG00000008377) #18	get3 (ENSPKIG00000008352) #19	HOOK2 (ENSPKIG00000008237) #21	junbb (ENSPKIG00000008190) #22	ENSPKIG00000008169	MAST1 (ENSPKIG00000008007) #26	smarca4a (ENSPKIG00000007770)	ldlra (ENSPKIG00000007690)	CDKN2D (ENSPKIG00000007669)	kri1 (ENSPKIG00000007632)	spc24 (ENSPKIG00000007607)	ENSPKIG00000007590	foxd7 (ENSPKIG00000007581)	ENSPKIG00000007563	tmem205 (ENSPKIG00000007544)	CNN1 (ENSPKIG00000007513)	tlcd4b (ENSPKIG00000007483)	plppr2a (ENSPKIG00000007463)	ENSPKIG00000007453
Clupeocephala	ANCESTRAL SPECIES	5	ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00390000004368	ENSGT00940000157552.s.a	ENSGT00940000164506.b.a	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.a.a ##35	ENSGT00940000163721	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.b.b	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a
Otomorpha	ANCESTRAL SPECIES	19	ENSGT00940000158718.a.b	ENSGT00390000000976	ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.v	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i
Clupeiformes	ANCESTRAL SPECIES	17	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000177829	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.b #22	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00940000154915	ENSGT00390000018266	ENSGT00940000159290	ENSGT00940000160393	ENSGT00390000018570.a.a.b	ENSGT00940000164377	ENSGT00390000004010.a.b.a.a.e	ENSGT00940000175471	ENSGT00990000204948
Atlantic herring	MODERN SPECIES		ENSCHAG00000015622	pglyrp6 (ENSCHAG00000000673)	trappc5 (ENSCHAG00000000716)	MCOLN1 (ENSCHAG00000000876)	ENSCHAG00000001198	pkn1b (ENSCHAG00000001842)	ENSCHAG00000011735	ENSCHAG00000011747	ENSCHAG00000011753	ENSCHAG00000011761	ddx39aa (ENSCHAG00000011776)	ENSCHAG00000011909	txn2 (ENSCHAG00000011915)	MYH9 (ENSCHAG00000012446)	slc25a38a (ENSCHAG00000026397)	junbb (ENSCHAG00000026405) #22	rtbdn (ENSCHAG00000026408) #25	MAST1 (ENSCHAG00000026419) #26	ATG4D (ENSCHAG00000026457)	ENSCHAG00000026459	smarca4a (ENSCHAG00000026467)	ldlra (ENSCHAG00000026568)	kri1 (ENSCHAG00000026668)	MOSMO (ENSCHAG00000026674)	ENSCHAG00000026681	SDR42E2 (ENSCHAG00000026689)	CDR2 (ENSCHAG00000026697)	mfsd13al (ENSCHAG00000026699)	ENSCHAG00000026702	ARHGAP44 (ENSCHAG00000026709)	hs3st3b1a (ENSCHAG00000026733)
Otophysi	ANCESTRAL SPECIES	358														ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000153578.A.e	ENSGT00940000157864.a.b	ENSGT00720000108861	ENSGT00940000155004.t
Characiphysae	ANCESTRAL SPECIES	26	ENSGT00440000039203.j	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.v.a	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611	ENSGT00950000183036.b.f	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000153578.A.e	ENSGT00940000157864.a.b	ENSGT00720000108861	ENSGT00940000155004.t.a.a	ENSGT00940000157333.b	ENSGT00390000000204	ENSGT00950000182895.b.b	ENSGT00940000164904.b	ENSGT00940000159924.c.b	ENSGT00940000159339.sb.b	ENSGT00940000158816.c	ENSGT00390000006009.a.a.a.d.b
Characiphysae_b	ANCESTRAL SPECIES	17	ENSGT00440000039203.j	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.v.a	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611	ENSGT00950000183036.b.f	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000153578.A.e	ENSGT00940000157864.a.b	ENSGT00940000157333.b	ENSGT00390000000204	ENSGT00950000182895.b.a.a	ENSGT00940000164904.b	ENSGT00940000159924.c.b	ENSGT00940000159339.sb.b	ENSGT00940000158816.c	ENSGT00390000006009.a.a.a.c.b	ENSGT00940000156843	ENSGT00940000154322.A.b.a
Characoidei	ANCESTRAL SPECIES	90	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.v.a	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611	ENSGT00950000183036.b.f	ENSGT00390000000976	ENSGT00530000063960	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000153578.A.e	ENSGT00940000157864.a.b	ENSGT00940000168137	ENSGT00940000155004.t.b	ENSGT00940000157333.b	ENSGT00390000000204	ENSGT00940000164904.b	ENSGT00940000159924.c.b	ENSGT00940000159339.sb.b	ENSGT00940000158816.c	ENSGT00940000156843	ENSGT00940000154322.A.b.a
Red-bellied piranha	MODERN SPECIES	395										ENSPNAG00000003483	MCOLN1 (ENSPNAG00000017540)	TRAPPC5 (ENSPNAG00000003481)	ubn2b (ENSPNAG00000017512)	trir (ENSPNAG00000017464) #18	hook2 (ENSPNAG00000017447) #21	junbb (ENSPNAG00000017419) #22	rtbdn (ENSPNAG00000017387) #25	MAST1 (ENSPNAG00000017359) #26	ENSPNAG00000005331	ENSPNAG00000017236	ENSPNAG00000017217	ENSPNAG00000006813
Mexicana tetra	MODERN SPECIES	15	MYH9 (ENSAMXG00000015296)	txn2 (ENSAMXG00000038781)	ENSAMXG00000015267	ddx39ab (ENSAMXG00000018631)	ENSAMXG00000015240	ENSAMXG00000033415	ENSAMXG00000015228	ENSAMXG00000015212	pkn1b (ENSAMXG00000015189)	ENSAMXG00000029303	MCOLN1 (ENSAMXG00000015134)	trir (ENSAMXG00000042277) #18	ubn2b (ENSAMXG00000015063)	TRAPPC5 (ENSAMXG00000038506)	hook2 (ENSAMXG00000015035) #21	junbb (ENSAMXG00000034822) #22	rtbdn (ENSAMXG00000005331) #25	MAST1 (ENSAMXG00000005313) #26	ENSAMXG00000042693	ENSAMXG00000019106	ENSAMXG00000005293	SPHK1 (ENSAMXG00000041303)	ENSAMXG00000042787	ENSAMXG00000002318	cygb1 (ENSAMXG00000019396)	GGA3 (ENSAMXG00000019401)	NUP85 (ENSAMXG00000042274)	sumo2b (ENSAMXG00000019405)	jpt1b (ENSAMXG00000019411)	RBFOX3 (ENSAMXG00000042841)	mmd (ENSAMXG00000030092)
Electric eel	MODERN SPECIES	408	rangap1a (ENSEEEG00000024510)	slc25a38a (ENSEEEG00000024509)	MYH9 (ENSEEEG00000024134)	txn2 (ENSEEEG00000023942)	ENSEEEG00000023941	ddx39ab (ENSEEEG00000023939)	ENSEEEG00000023934	ENSEEEG00000023931	pkn1b (ENSEEEG00000023912)	ENSEEEG00000023897	MCOLN1 (ENSEEEG00000023868)	TRAPPC5 (ENSEEEG00000023865)	ubn2b (ENSEEEG00000023864)	trir (ENSEEEG00000023863) #18	hook2 (ENSEEEG00000023861) #21	junbb (ENSEEEG00000023857) #22
Channel catfish	MODERN SPECIES	3	MYH9 (ENSIPUG00000021243)	txn2 (ENSIPUG00000021332)	ENSIPUG00000021335	DDX39A (ENSIPUG00000021341)	ENSIPUG00000021400	ENSIPUG00000021404	ENSIPUG00000021407	ENSIPUG00000021411	pkn1b (ENSIPUG00000021417)	ENSIPUG00000021440	MCOLN1 (ENSIPUG00000021446)	TRAPPC5 (ENSIPUG00000021452)	ubn2b (ENSIPUG00000021459)	c12h19orf43 (ENSIPUG00000021520) #18	hook2 (ENSIPUG00000021528) #21	junb (ENSIPUG00000021554) #22	rtbdn (ENSIPUG00000021562) #25	ENSIPUG00000021579 #26	MAST1 (ENSIPUG00000021594) #26	ENSIPUG00000021604	ENSIPUG00000021612	SPHK1 (ENSIPUG00000021631)	fbf1 (ENSIPUG00000021673)	cygb1 (ENSIPUG00000021707)	cygb1 (ENSIPUG00000021713)	ENSIPUG00000021725	ENSIPUG00000021739	nup85 (ENSIPUG00000021770)	sumo2 (ENSIPUG00000021832)	hn1 (ENSIPUG00000021843)	ENSIPUG00000021849
Cyprinoidei	ANCESTRAL SPECIES	216													ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000153578.A.e	ENSGT00940000157864.a.b	ENSGT00940000155004.t
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	187	ENSGT00530000064086.w	ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b	ENSGT00940000165172.a.c	ENSGT00940000154912.v.a.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000177829	ENSGT00940000154990.fb.b.h	ENSGT00940000168611.a	ENSGT00950000183036.b.f.c.a	ENSGT00940000160987.e.b.a.b.a	ENSGT00940000155858.e.b	ENSGT00390000012267.i #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a.c #22	ENSGT00950000183144.B.bb #25	ENSGT00940000157700.d.w #26	ENSGT00530000063000.a.a.b.i.a	ENSGT00950000182923.A.`b.a	ENSGT00940000153578.A.e.b	ENSGT00940000157864.a.b.a	ENSGT00940000155004.t.c	ENSGT00940000163472.i.a.b.b.a.a.b.b.b.a.a.a.b.b.b	ENSGT00720000108861	ENSGT00940000155004.t.d
Cyprininae_a	ANCESTRAL SPECIES	310	ENSGT00940000155632.o.o	ENSGT00530000064086.w	ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b	ENSGT00940000165172.a.c	ENSGT00940000154912.v.a.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b.h	ENSGT00940000168611.a	ENSGT00950000183036.b.f.c.a	ENSGT00940000160987.e.b.a.b.a	ENSGT00940000155858.e.b	ENSGT00390000012267.i #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a.c #22	ENSGT00950000183144.B.bb #25	ENSGT00940000163472.i.a.b.b.a.a.b.b.b.a.a.a.b.b.b	ENSGT00940000157700.d.w #26	ENSGT00530000063000.a.a.b.i.a	ENSGT00950000182923.A.`b.a	ENSGT00940000153578.A.e.b	ENSGT00940000157864.a.b.a	ENSGT00720000108861	ENSGT00940000155004.t.d	ENSGT00390000013973.A.a.c.a.g.a.a.a	ENSGT00940000157333.b.c	ENSGT00390000000204.l.b	ENSGT00950000182895.a.a.a.a.b
Common carp reference	MODERN SPECIES	1	pkn1b (ENSCCRG00000054870)	ENSCCRG00000034372	ENSCCRG00000076588	ENSCCRG00000066760	zgc:136767 (ENSCCRG00000016949)	ENSCCRG00000016944	ENSCCRG00000059729	ENSCCRG00000060263	ENSCCRG00000072846	ENSCCRG00000063464	ENSCCRG00000080742	trir (ENSCCRG00000054616) #18	ubn2b (ENSCCRG00000010344)	ENSCCRG00000011540 #21	ENSCCRG00000082218	junbb (ENSCCRG00000057802) #22	ENSCCRG00000058919	ENSCCRG00000008133 #26	ENSCCRG00000015362	ENSCCRG00000008059	ENSCCRG00000061570	ENSCCRG00000078624	ENSCCRG00000064221	cygb1 (ENSCCRG00000074613)	ENSCCRG00000039366	ENSCCRG00000076059	sumo2b (ENSCCRG00000072018)	ENSCCRG00000071156 #25	ENSCCRG00000043190	ENSCCRG00000044382	ENSCCRG00000064297
Golden-line barbel	MODERN SPECIES	1132												ENSSGRG00000037282	ubn2b (ENSSGRG00000037283)	ENSSGRG00000037287	hook2 (ENSSGRG00000037314) #21	junbb (ENSSGRG00000038189) #22	rtbdn (ENSSGRG00000038193) #25	MAST1 (ENSSGRG00000038218) #26	ENSSGRG00000038451	ENSSGRG00000038458	ENSSGRG00000038461	SPHK1 (ENSSGRG00000038462)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	50	GGA3 (ENSCARG00000024855)	NUP85 (ENSCARG00000025341)	ENSCARG00000025661	jpt1b (ENSCARG00000025675)	ENSCARG00000025689	ENSCARG00000025694	MCOLN1 (ENSCARG00000025717)	ENSCARG00000026312	ENSCARG00000026320	ENSCARG00000026327	ENSCARG00000026335	ubn2b (ENSCARG00000026351)	trir (ENSCARG00000026472) #18	HOOK2 (ENSCARG00000026534) #21	ENSCARG00000027035	junbb (ENSCARG00000027041) #22	rtbdn (ENSCARG00000027047) #25	ENSCARG00000027061	MAST1 (ENSCARG00000027125) #26	ATG4D (ENSCARG00000028161)	ENSCARG00000028171	SPHK1 (ENSCARG00000028205)	cygb1 (ENSCARG00000028224)	ENSCARG00000028249	ENSCARG00000028371	ENSCARG00000028479	ENSCARG00000028500	ENSCARG00000028505	pick1 (ENSCARG00000028518)	plbd1a (ENSCARG00000028639)	ENSCARG00000029031
Goldfish	MODERN SPECIES	50	ENSCARG00000032368	SHISA6 (ENSCARG00000032384)	elac2 (ENSCARG00000032430)	ENSCARG00000032983	ENSCARG00000033034	ENSCARG00000033035	ENSCARG00000033039	ENSCARG00000033047	ENSCARG00000033076	hlfa (ENSCARG00000033258)	mmd (ENSCARG00000033280)	ENSCARG00000033330	ubn2b (ENSCARG00000033359)	trir (ENSCARG00000033422) #18	HOOK2 (ENSCARG00000033609) #21	junbb (ENSCARG00000036449) #22	rtbdn (ENSCARG00000036456) #25	MAST1 (ENSCARG00000022935) #26	ATG4D (ENSCARG00000024672)	ENSCARG00000024696	SPHK1 (ENSCARG00000024706)	cygb1 (ENSCARG00000024802)	ENSCARG00000024815	GGA3 (ENSCARG00000024855)	NUP85 (ENSCARG00000025341)	ENSCARG00000025661	jpt1b (ENSCARG00000025675)	ENSCARG00000025689	ENSCARG00000025694	MCOLN1 (ENSCARG00000025717)	ENSCARG00000026312
Cyprininae	ANCESTRAL SPECIES	611								ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.a.a.a.b.b.a	ENSGT00940000165172.a.d	ENSGT00940000154912.v.a.a	ENSGT00940000154990.fb.b.g.a	ENSGT00940000168611.b	ENSGT00950000183036.b.f.c.b	ENSGT00940000155858.e.a	ENSGT00390000012267.j #18	ENSGT00940000161195.a.a.d #22	ENSGT00950000183144.B.cb #25	ENSGT00940000157700.d.x #26	ENSGT00530000063000.a.a.b.i.b	ENSGT00950000182923.A.`b.b	ENSGT00940000153578.A.e.a	ENSGT00940000157864.a.b.b	ENSGT00940000168137
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	22	ENSCARG00000000831	ENSCARG00000000827	MAST1 (ENSCARG00000000820) #26	ENSCARG00000000807	ENSCARG00000000784	ENSCARG00000000765	ddx39ab (ENSCARG00000000732)	ENSCARG00000000709	pkn1b (ENSCARG00000000476)	ENSCARG00000000331	ENSCARG00000000322	MCOLN1 (ENSCARG00000000299)	ENSCARG00000000286	ubn2b (ENSCARG00000000261)	trir (ENSCARG00000000228) #18	junbb (ENSCARG00000000210) #22	rtbdn (ENSCARG00000000201) #25	GRIN2B (ENSCARG00000000186)	ENSCARG00000000174	ENSCARG00000000162	ENSCARG00000000152	ENSCARG00000000144	rrp7a (ENSCARG00000000135)	ENSCARG00000001524	KCNJ4 (ENSCARG00000001521)	KDELR3 (ENSCARG00000001520)	ENSCARG00000001515	ENSCARG00000001485	CCDC134 (ENSCARG00000001467)	ENSCARG00000001462	ENSCARG00000001438
Goldfish	MODERN SPECIES	22	MAST1 (ENSCARG00000000820) #26	ENSCARG00000000827	ENSCARG00000000831	ENSCARG00000000848	ENSCARG00000000859	ENSCARG00000000872	ENSCARG00000000883	ENSCARG00000000892	cygb1 (ENSCARG00000000896)	ENSCARG00000000901	ENSCARG00000000907	GGA3 (ENSCARG00000000990)	ENSCARG00000001249	sumo2b (ENSCARG00000001255)	jpt1b (ENSCARG00000001271)	junbb (ENSCARG00000001277) #22	rtbdn (ENSCARG00000001283) #25	MAST1 (ENSCARG00000001290) #26	ENSCARG00000001296	ENSCARG00000001303	ENSCARG00000001310	SPHK1 (ENSCARG00000001318)	cygb1 (ENSCARG00000001332)	ENSCARG00000001336	GGA3 (ENSCARG00000001418)	NUP85 (ENSCARG00000001651)	sumo2b (ENSCARG00000001736)	jpt1b (ENSCARG00000001764)	ENSCARG00000001791	zgc:136767 (ENSCARG00000001807)	ENSCARG00000001808
Cyprininae_a	ANCESTRAL SPECIES	649																ENSGT00940000161195.a.a.d #22	ENSGT00950000183144.B.cb #25	ENSGT00940000157700.d.x #26	ENSGT00530000063000.a.a.b.i.b	ENSGT00950000182923.A.`b.b	ENSGT00940000153578.A.e.a	ENSGT00940000157864.a.b.b	ENSGT00940000168137
Common carp reference	MODERN SPECIES	3	ENSCCRG00000080424	ENSCCRG00000001283	zc3h7ba (ENSCCRG00000001289)	rangap1a (ENSCCRG00000001317)	ENSCCRG00000057560	ENSCCRG00000001372	ENSCCRG00000068569	slc25a38a (ENSCCRG00000075945)	ENSCCRG00000044135	ENSCCRG00000054297	ENSCCRG00000062308	ddx39ab (ENSCCRG00000080061)	ENSCCRG00000078792	pkn1b (ENSCCRG00000021721)	ENSCCRG00000066526	ENSCCRG00000078673 #22	ENSCCRG00000082409	ENSCCRG00000060221	ubn2b (ENSCCRG00000011530)	trir (ENSCCRG00000078765) #18	ENSCCRG00000011830 #21	rtbdn (ENSCCRG00000064399) #25	ENSCCRG00000068486 #26	ENSCCRG00000015372	ENSCCRG00000008062	ENSCCRG00000071932	ENSCCRG00000080883	ENSCCRG00000064089	ENSCCRG00000052105	ENSCCRG00000045393	cygb1 (ENSCCRG00000082133)
Golden-line barbel	MODERN SPECIES	1217								CDH18 (ENSSGRG00000022957)	ENSSGRG00000022999	ENSSGRG00000023002	ENSSGRG00000023004	KIF5B (ENSSGRG00000023077)	ENSSGRG00000026319	dpysl4 (ENSSGRG00000026350)	ENSSGRG00000029228	junbb (ENSSGRG00000029333) #22	rtbdn (ENSSGRG00000029334) #25
Zebrafish	MODERN SPECIES	18	ENSDARG00000104193	ENSDARG00000105044	ENSDARG00000111323	trim35-19 (ENSDARG00000099639)	ENSDARG00000100373	ENSDARG00000100721	trim35-22 (ENSDARG00000102264)	trim35-23 (ENSDARG00000102368)	trim35-24 (ENSDARG00000099684)	ENSDARG00000101055	trim35-21 (ENSDARG00000102303)	ubn2b (ENSDARG00000100508)	trir (ENSDARG00000104178) #18	ENSDARG00000039309 #21	hook2 (ENSDARG00000099235) #21	junbb (ENSDARG00000104773) #22	rtbdn (ENSDARG00000103413) #25	ENSDARG00000090740	znf1001 (ENSDARG00000103777)	ENSDARG00000115857	ENSDARG00000102411	zgc:173517 (ENSDARG00000102401)	zgc:113443 (ENSDARG00000100803)	ENSDARG00000094216	zgc:173577 (ENSDARG00000098923)	ENSDARG00000103530	ENSDARG00000091679	ENSDARG00000110003	ENSDARG00000114108	ENSDARG00000115220	ENSDARG00000089947
Euteleosteomorpha	ANCESTRAL SPECIES		ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00940000154277.b.b.b	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519
Protacanthopterygii	ANCESTRAL SPECIES	8											ENSGT00950000183099.b	ENSGT00390000000159	ENSGT00940000155858.e	ENSGT00390000012267.e #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.b.b	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000161143	ENSGT00470000042444	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	998														ENSGT00390000012267.e.a #18	ENSGT00940000160152.l #21	ENSGT00940000161195.a.a.e #22	ENSGT00940000155828 #23	ENSGT00950000183144.B.`b #25	ENSGT00940000157700.d.a.a #26
Salmoninae_a	ANCESTRAL SPECIES	158	ENSGT01100000263705	ENSGT00940000154990.fb.b.a	ENSGT00940000177829	ENSGT00940000154912.u.a.d	ENSGT00940000165172.a.f.a	ENSGT00530000064086.`b	ENSGT00940000155632.o	ENSGT00550000075117.m.b.d	ENSGT00950000183099.a.a.b	ENSGT00390000000159.i.a	ENSGT00940000155858.e.e	ENSGT00390000012267.e.a #18	ENSGT00940000160152.l #21	ENSGT00390000012267.f #18	ENSGT00940000160152.k.a #21	ENSGT00940000161195.a.a.e #22	ENSGT00940000155828 #23	ENSGT00950000183144.B.`b #25	ENSGT00940000157700.d.a.a #26
Oncorhynchus	ANCESTRAL SPECIES	65	ENSGT00940000159311.d.a.a.i.b	ENSGT00940000160024.c.a.b	ENSGT00940000159311.d.a.a.i.a.c	ENSGT00940000154912.u.a.d	ENSGT00940000165172.a.f.a	ENSGT00530000064086.`b	ENSGT00940000155632.o.b	ENSGT00550000075117.m.b.d.c	ENSGT00950000183099.a.a.b	ENSGT00390000000159.i.a	ENSGT00940000155858.e.e	ENSGT00390000012267.e.a #18	ENSGT00940000160152.l #21	ENSGT00390000012267.f #18	ENSGT00940000160152.k.a #21	ENSGT00940000161195.a.a.e #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.b.b.b.a.a	ENSGT00950000183144.B.`b #25	ENSGT00940000157700.d.a.a #26	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00950000182923.A.ib.a.a	ENSGT00940000156887.a.e.c.a.a	ENSGT00940000154819.a.b.c.a.g.b	ENSGT00390000005605.e	ENSGT00390000005584.a.b	ENSGT01050000244887.A.a.a.a.j.d	ENSGT00990000210763.a	ENSGT00940000160757.n	ENSGT00940000157140.b.b.b.c.a	ENSGT00940000165343.c.b.d
Oncorhynchus_a	ANCESTRAL SPECIES	44	ENSGT00530000063861.a.d	ENSGT00940000156166.b.a.a.a	ENSGT00940000159311.d.a.a.i.b	ENSGT00940000160024.c.a.b	ENSGT00940000159311.d.a.a.i.a.c	ENSGT00940000154912.u.a.d	ENSGT00940000165172.a.f.a	ENSGT00530000064086.`b	ENSGT00940000155632.o.b	ENSGT00550000075117.m.b.d.c	ENSGT00950000183099.a.a.b	ENSGT00390000000159.i.a	ENSGT00940000155858.e.e	ENSGT00390000012267.f #18	ENSGT00940000160152.k.a #21	ENSGT00940000161195.a.a.e #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.b.b.b.a.a	ENSGT00950000183144.B.`b #25	ENSGT00940000157700.d.a.a #26	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00950000182923.A.ib.a.a	ENSGT00940000156887.a.e.c.a.a	ENSGT00940000154819.a.b.c.a.g.b	ENSGT00390000005605.e	ENSGT00390000005584.a.b	ENSGT01050000244887.A.a.a.a.j.d	ENSGT00990000210763.a	ENSGT00940000160757.n	ENSGT00940000157140.b.b.b.c.a	ENSGT00940000165343.c.b.d
Coho salmon	MODERN SPECIES	1	ENSOKIG00005013930	pkn1b (ENSOKIG00005014193)	ENSOKIG00005019404	ENSOKIG00005019414	ENSOKIG00005019420	ENSOKIG00005019425	DDX39A (ENSOKIG00005019436)	ENSOKIG00005019502	TXN2 (ENSOKIG00005019510)	MYH9 (ENSOKIG00005019571)	slc25a38a (ENSOKIG00005019706)	ENSOKIG00005019727	TTC26 (ENSOKIG00005019958)	trir (ENSOKIG00005020242) #18	HOOK2 (ENSOKIG00005020304) #21	junbb (ENSOKIG00005020817) #22	PRDX2 (ENSOKIG00005020821) #23	rtbdn (ENSOKIG00005020855) #25	MAST1 (ENSOKIG00005020950) #26	ATG4D (ENSOKIG00005021601)	ENSOKIG00005021672	smarca4a (ENSOKIG00005021743)	ldlra (ENSOKIG00005022079)	kri1 (ENSOKIG00005022118)	spc24 (ENSOKIG00005022132)	s1pr5a (ENSOKIG00005022154)	ENSOKIG00005014394	ENSOKIG00005014478	foxd7 (ENSOKIG00005014487)	si:dkeyp-69e1.8 (ENSOKIG00005014497)	hmgxb4a (ENSOKIG00005014505)
Chinook salmon	MODERN SPECIES	19	ENSOTSG00005012281	pkn1b (ENSOTSG00005012303)	ENSOTSG00005012437	ENSOTSG00005012438	ENSOTSG00005012439	DDX39A (ENSOTSG00005012443)	ENSOTSG00005012454	txn2 (ENSOTSG00005012455)	slc25a38a (ENSOTSG00005012457)	rpsa (ENSOTSG00005012458)	TTC26 (ENSOTSG00005012598)	ubn2b (ENSOTSG00005013552)	trir (ENSOTSG00005013560) #18	HOOK2 (ENSOTSG00005013561) #21	ENSOTSG00005013708	junbb (ENSOTSG00005013709) #22	ENSOTSG00005013710	rtbdn (ENSOTSG00005013711) #25	MAST1 (ENSOTSG00005013712) #26	ATG4D (ENSOTSG00005014555)	ENSOTSG00005014556	ENSOTSG00005014557	ENSOTSG00005014558	slc25a19 (ENSOTSG00005014559)	MIF4GD (ENSOTSG00005014564)	mrps7 (ENSOTSG00005014567)	GGA3 (ENSOTSG00005014572)	ENSOTSG00005014782	ENSOTSG00005014783	srebf1 (ENSOTSG00005014784)	TOM1L2 (ENSOTSG00005014787)
Rainbow trout	MODERN SPECIES	4	pkn1b (ENSOMYG00000008604)	ENSOMYG00000019095	ENSOMYG00000058328	ENSOMYG00000019130	ENSOMYG00000019268	ENSOMYG00000019358	ENSOMYG00000019364	ENSOMYG00000019426	ENSOMYG00000019515	ENSOMYG00000019560	ENSOMYG00000019788	ubn2b (ENSOMYG00000019996)	trir (ENSOMYG00000020022) #18	HOOK2 (ENSOMYG00000020139) #21	ENSOMYG00000068385	junbb (ENSOMYG00000020826) #22	ENSOMYG00000020832	rtbdn (ENSOMYG00000020840) #25	MAST1 (ENSOMYG00000020896) #26	ENSOMYG00000053440	ENSOMYG00000021036	ENSOMYG00000021049	smarca4a (ENSOMYG00000021175)	ldlra (ENSOMYG00000021575)	ENSOMYG00000067083	kri1 (ENSOMYG00000022391)	spc24 (ENSOMYG00000022421)	s1pr5a (ENSOMYG00000022427)	ENSOMYG00000022433	il-8 (ENSOMYG00000022444)	foxd7 (ENSOMYG00000022453)
Salmo	ANCESTRAL SPECIES	53	ENSGT00940000154990.fb.b.a	ENSGT00530000063861.a.e	ENSGT00940000156166.b.a.a.c	ENSGT00940000160024.c.a.b	ENSGT00940000159311.d.a.a.i.a	ENSGT00940000154912.u.a.d	ENSGT00940000165172.a.f.a	ENSGT00530000064086.`b	ENSGT00940000155632.o.c	ENSGT00550000075117.m.b.d	ENSGT00950000183099.a.b	ENSGT00390000000159.i.a	ENSGT00940000155858.e.e	ENSGT00390000012267.e.b.b #18	ENSGT00940000160152.k.a #21	ENSGT00940000161195.a.a.e #22	ENSGT00940000154277.b.b.b.b.a	ENSGT00950000183144.B.ab #25	ENSGT00940000157700.d.a.a #26	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00950000182923.A.ib.a.a	ENSGT00940000156887.a.e.a	ENSGT00940000154819.a.b.c.a.g	ENSGT00390000005605.e	ENSGT00390000005584.b	ENSGT01050000244887.A.a.a.a.j.d	ENSGT00990000210763	ENSGT00940000160757.l	ENSGT00940000157140.b.b.b.c.a	ENSGT00940000165343.c.b.d	ENSGT00390000012436.g.f.a
Atlantic salmon	MODERN SPECIES	25	ENSSSAG00000046013	pkn1b (ENSSSAG00000047954)	ENSSSAG00000045313	ENSSSAG00000098070	ENSSSAG00000045195	ENSSSAG00000045176	ddx39 (ENSSSAG00000045119)	ENSSSAG00000066709	ENSSSAG00000105848	ENSSSAG00000041571	ENSSSAG00000109013	ENSSSAG00000041429	ENSSSAG00000039421	ubn2b (ENSSSAG00000037952)	HOOK2 (ENSSSAG00000067743) #21	junbb (ENSSSAG00000084145) #22	ENSSSAG00000059068	rbp (ENSSSAG00000108597) #25	MAST1 (ENSSSAG00000008779) #26	ENSSSAG00000008557	ENSSSAG00000008548	smarca4a (ENSSSAG00000096866)	ldlra (ENSSSAG00000005295)	kri1 (ENSSSAG00000005024)	s1pr5a (ENSSSAG00000121767)	ENSSSAG00000006518	il8 (ENSSSAG00000006498)	foxd7 (ENSSSAG00000105207)	si:dkeyp-69e1.8 (ENSSSAG00000006481)	hmgxb4a (ENSSSAG00000006466)	foxred2 (ENSSSAG00000006269)
River trout	MODERN SPECIES		ENSSTUG00000001632	ENSSTUG00000001635	ENSSTUG00000001648	ENSSTUG00000001661	ENSSTUG00000001676	DDX39A (ENSSTUG00000001691)	ENSSTUG00000001809	txn2 (ENSSTUG00000001817)	MYH9 (ENSSTUG00000001873)	slc25a38a (ENSSTUG00000002078)	rpsa (ENSSTUG00000002092)	TTC26 (ENSSTUG00000002163)	ubn2b (ENSSTUG00000002990)	trir (ENSSTUG00000003123) #18	HOOK2 (ENSSTUG00000003162) #21	junbb (ENSSTUG00000003514) #22	ENSSTUG00000003523	rtbdn (ENSSTUG00000003533) #25	MAST1 (ENSSTUG00000003591) #26	ATG4D (ENSSTUG00000004457)	ENSSTUG00000004499	smarca4a (ENSSTUG00000004756)	ldlra (ENSSTUG00000012337)	kri1 (ENSSTUG00000012419)	spc24 (ENSSTUG00000012473)	s1pr5a (ENSSTUG00000012490)	ENSSTUG00000012498	ENSSTUG00000012638	foxd7 (ENSSTUG00000012658)	si:dkeyp-69e1.8 (ENSSTUG00000012665)	hmgxb4a (ENSSTUG00000012674)
Huchen	MODERN SPECIES	953				ENSHHUG00000019553	ENSHHUG00000019550	DDX39A (ENSHHUG00000019344)	ENSHHUG00000019325	txn2 (ENSHHUG00000019319)	MYH9 (ENSHHUG00000019015)	slc25a38a (ENSHHUG00000019008)	rpsa (ENSHHUG00000018951)	TTC26 (ENSHHUG00000018854)	ubn2b (ENSHHUG00000018825)	trir (ENSHHUG00000018821) #18	HOOK2 (ENSHHUG00000018768) #21	junbb (ENSHHUG00000018764) #22	ENSHHUG00000018569	rtbdn (ENSHHUG00000018556) #25	ENSHHUG00000018546 #26	ENSHHUG00000018544	ENSHHUG00000018535 #26	ENSHHUG00000018532 #26	ATG4D (ENSHHUG00000018522)	ENSHHUG00000018512	smarca4a (ENSHHUG00000018463)	ldlra (ENSHHUG00000017448)	kri1 (ENSHHUG00000017399)	spc24 (ENSHHUG00000017386)	s1pr5a (ENSHHUG00000017377)	ENSHHUG00000017362	ENSHHUG00000017310
Salmoninae	ANCESTRAL SPECIES		ENSGT00940000154912.u.a.d	ENSGT00940000165172.a.f	ENSGT00530000064086.ab	ENSGT00940000155632.o	ENSGT00550000075117.m.b.d	ENSGT00950000183099.a.a.b	ENSGT00390000000159.i.a	ENSGT00530000064086.`b	ENSGT00550000075117.m.b.c	ENSGT00950000183099.a.b	ENSGT00950000183099.a.a.a	ENSGT00390000000159.i.b	ENSGT00940000155858.e	ENSGT00390000012267.e.b #18	ENSGT00940000160152.k #21	ENSGT00940000161195.a.a.f #22	ENSGT00940000154277.b.b.b.b	ENSGT00950000183144.B.ab #25	ENSGT00940000157700.d.a.b #26	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00950000182923.A.ib.a.b	ENSGT00940000156887.a.f.a	ENSGT00940000157700.d.b #26	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00950000182923.A.ib.a.a	ENSGT00940000156887.a.e	ENSGT00940000154819.a.b.c.a.g	ENSGT00390000005605.f	ENSGT00390000005584.a.a	ENSGT01050000244887.A.a.a.a.j	ENSGT00990000210763
Salmoninae_a	ANCESTRAL SPECIES	37	ENSGT00950000183036.b.f.k	ENSGT01100000263820.b	ENSGT00940000154990.fb.b.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a.i.b	ENSGT00940000160024.c.a.b	ENSGT00940000159311.d.a.a.i.a	ENSGT00940000154912.u.a.c	ENSGT00940000165172.a.e	ENSGT00950000183099.a.a.a	ENSGT00390000000159.i.b	ENSGT00940000155858.e.f	ENSGT00390000012267.e.b #18	ENSGT00940000160152.k.b #21	ENSGT00940000161195.a.a.f #22	ENSGT00940000154277.b.b.b.a	ENSGT00940000154277.b.b.b.b.a	ENSGT00950000183144.B.ab #25	ENSGT00940000157700.d.a.b #26	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00950000182923.A.ib.a.b	ENSGT00940000156887.a.f.a	ENSGT00940000157700.d.b #26	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00950000182923.A.ib.a.a	ENSGT00940000156887.a.e	ENSGT00940000154819.a.b.c.a.g	ENSGT00390000005605.e	ENSGT00390000005584.a.b	ENSGT01050000244887.A.a.a.a.j.d
Salmo	ANCESTRAL SPECIES	69	ENSGT00940000158718.a.b.i	ENSGT00390000000976.d.b.d.a	ENSGT00950000183036.b.f.k	ENSGT01100000263820.b	ENSGT00940000154990.fb.b.b	ENSGT00530000063861.a.f	ENSGT00940000156166.b.a.a.d	ENSGT00940000159311.d.a.a.i.b	ENSGT00940000154912.u.a.c	ENSGT00940000165172.a.f.b	ENSGT00530000064086.ab	ENSGT00940000155632.o.d	ENSGT00940000155858.e.f	ENSGT00390000012267.e.b.a #18	ENSGT00940000160152.k.b #21	ENSGT00940000161195.a.a.f #22	ENSGT00940000154277.b.b.b.b.b	ENSGT00950000183144.B.`b #25	ENSGT00940000157700.d.b #26	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00940000156887.a.e.b	ENSGT00940000154819.a.b.c.a.h	ENSGT00390000005605.f	ENSGT01050000244887.A.a.a.a.j.c	ENSGT00940000160757.k	ENSGT00390000012436.g.f.b	ENSGT00940000157805.g	ENSGT00640000091519.f	ENSGT00390000017673.b.l.a	ENSGT01050000244824.G.k.c	ENSGT00940000155729.r.a.b
Atlantic salmon	MODERN SPECIES	22	ENSSSAG00000046261	ENSSSAG00000105147	pkn1b (ENSSSAG00000045359)	ENSSSAG00000110041	gfi1b (ENSSSAG00000066672)	ENSSSAG00000097197	ENSSSAG00000066700	ENSSSAG00000066742	ENSSSAG00000084151	ENSSSAG00000092859	ENSSSAG00000116040	ENSSSAG00000067676	ubn2b (ENSSSAG00000067711)	trir (ENSSSAG00000102091) #18	HOOK2 (ENSSSAG00000009349) #21	junbb (ENSSSAG00000084114) #22	ENSSSAG00000117056	rtbdn (ENSSSAG00000001518) #25	MAST1 (ENSSSAG00000068180) #26	ENSSSAG00000085374	smarca4a (ENSSSAG00000069499)	ldlra (ENSSSAG00000069976)	kri1 (ENSSSAG00000070681)	s1pr5a (ENSSSAG00000089324)	ENSSSAG00000006510	mip2a (ENSSSAG00000070770)	si:dkeyp-69e1.8 (ENSSSAG00000070767)	hmgxb4a (ENSSSAG00000026951)	foxred2 (ENSSSAG00000070717)	hmox1a (ENSSSAG00000070727)	mcm5 (ENSSSAG00000040979)
River trout	MODERN SPECIES	25	ENSSTUG00000012300	pkn1b (ENSSTUG00000012422)	ENSSTUG00000013522	ENSSTUG00000013547	ENSSTUG00000013557	DDX39A (ENSSTUG00000013590)	ENSSTUG00000013717	txn2 (ENSSTUG00000013724)	MYH9 (ENSSTUG00000013961)	SLC25A38 (ENSSTUG00000017494)	ENSSTUG00000017497	ubn2b (ENSSTUG00000017508)	trir (ENSSTUG00000017553) #18	HOOK2 (ENSSTUG00000017625) #21	ENSSTUG00000018644	junbb (ENSSTUG00000018671) #22	ENSSTUG00000018679	rtbdn (ENSSTUG00000018684) #25	MAST1 (ENSSTUG00000018719) #26	ATG4D (ENSSTUG00000019419)	smarca4a (ENSSTUG00000003900)	ldlra (ENSSTUG00000004443)	kri1 (ENSSTUG00000004737)	spc24 (ENSSTUG00000004767)	s1pr5a (ENSSTUG00000004772)	ENSSTUG00000004778	ENSSTUG00000004785	foxd7 (ENSSTUG00000004790)	si:dkeyp-69e1.8 (ENSSTUG00000004797)	hmgxb4a (ENSSTUG00000004802)	ankrd54 (ENSSTUG00000004828)
Oncorhynchus	ANCESTRAL SPECIES	37	ENSGT00940000154990.fb.b.a.b	ENSGT00940000154990.fb.b.b	ENSGT00530000063861.a.c	ENSGT00940000156166.b.a.a.b	ENSGT00940000159311.d.a.a.i.a.d	ENSGT00940000154912.u.a.c	ENSGT00940000165172.a.f.b	ENSGT00530000064086.ab	ENSGT00940000155632.o.a	ENSGT00550000075117.m.b.d.d	ENSGT00950000183099.a.a.a	ENSGT00390000000159.i.b	ENSGT00940000155858.e.f	ENSGT00390000012267.e.b #18	ENSGT00940000160152.k.b #21	ENSGT00940000161195.a.a.f #22	ENSGT00940000154277.b.b.b.a	ENSGT00940000154277.b.b.b.b.a.b	ENSGT00950000183144.B.ab #25	ENSGT00940000157700.d.a.b #26	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00950000182923.A.hb	ENSGT00940000156887.a.e.c.b	ENSGT00940000157140.b.b.b.c.b	ENSGT00940000165343.c.b.c	ENSGT00390000012436.g.e	ENSGT00940000157805.g	ENSGT00640000091519.f.b	ENSGT00390000017673.b.l.b.b	ENSGT01050000244824.G.k.b	ENSGT00940000155729.r.b
Oncorhynchus_a	ANCESTRAL SPECIES	55	ENSGT00940000154990.fb.b.a.b	ENSGT00940000154990.fb.b.b	ENSGT00530000063861.a.c	ENSGT00940000156166.b.a.a.b	ENSGT00940000159311.d.a.a.i.a.d	ENSGT00940000154912.u.a.c	ENSGT00940000165172.a.f.b	ENSGT00530000064086.ab	ENSGT00940000155632.o.a	ENSGT00550000075117.m.b.d.d	ENSGT00950000183099.a.a.a	ENSGT00390000000159.i.b	ENSGT00940000155858.e.f	ENSGT00390000012267.e.b #18	ENSGT00940000160152.k.b #21	ENSGT00940000161195.a.a.f #22	ENSGT00940000154277.b.b.b.a	ENSGT00950000183144.B.ab #25	ENSGT00940000157700.d.a.b #26	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00950000182923.A.hb	ENSGT00940000156887.a.e.c.b	ENSGT00940000153882.a.b.a.b.e	ENSGT00940000158772.b.i	ENSGT00940000154830.c.c	ENSGT01050000244891.E.a.b.f	ENSGT00940000155563.k.a.d.a.a	ENSGT00940000154705.A.a.h	ENSGT00940000153578.A.e.h	ENSGT00390000015579.a.b.e	ENSGT00940000157864.a.b.h
Chinook salmon	MODERN SPECIES	33	ENSOTSG00005035287	ENSOTSG00005035288	GPRC5A (ENSOTSG00005035290)	ENSOTSG00005035291	ENSOTSG00005035292	ENSOTSG00005035293	SYNGR1 (ENSOTSG00005035295)	IFT27 (ENSOTSG00005035296)	ENSOTSG00005035297	ENSOTSG00005035299	ENSOTSG00005035300	TTC26 (ENSOTSG00005035305)	ubn2b (ENSOTSG00005035323)	trir (ENSOTSG00005035324) #18	HOOK2 (ENSOTSG00005035326) #21	junbb (ENSOTSG00005035968) #22	ENSOTSG00005035970	rtbdn (ENSOTSG00005035971) #25	MAST1 (ENSOTSG00005035980) #26	ATG4D (ENSOTSG00005036686)	ENSOTSG00005036687	smarca4a (ENSOTSG00005036691)	MCHR1 (ENSOTSG00005040660)	GRB2 (ENSOTSG00005040663)	ENSOTSG00005040677	kpna2 (ENSOTSG00005040684)	smurf2 (ENSOTSG00005040717)	ddx5 (ENSOTSG00005040745)	AANAT (ENSOTSG00005040747)	SPHK1 (ENSOTSG00005040750)	ENSOTSG00005040753
Coho salmon	MODERN SPECIES	26	pkn1b (ENSOKIG00005009738)	ENSOKIG00005011216	ENSOKIG00005011224	ENSOKIG00005011233	ENSOKIG00005011239	DDX39A (ENSOKIG00005011257)	ENSOKIG00005011630	ENSOKIG00005011644	MYH9 (ENSOKIG00005011933)	ENSOKIG00005014711	ENSOKIG00005014719	TTC26 (ENSOKIG00005014788)	ubn2b (ENSOKIG00005015236)	trir (ENSOKIG00005015385) #18	HOOK2 (ENSOKIG00005015416) #21	junbb (ENSOKIG00005015699) #22	ENSOKIG00005015705	rtbdn (ENSOKIG00005015720) #25	MAST1 (ENSOKIG00005015826) #26	ATG4D (ENSOKIG00005017147)	ENSOKIG00005017153	smarca4a (ENSOKIG00005017216)	ENSOKIG00005017571	ldlra (ENSOKIG00005017598)	kri1 (ENSOKIG00005018066)	spc24 (ENSOKIG00005018079)	s1pr5a (ENSOKIG00005018093)	ENSOKIG00005018100	ENSOKIG00005018117	ENSOKIG00005018132	ENSOKIG00005018149
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000058236	ENSOMYG00000055120	ENSOMYG00000020876	ENSOMYG00000020884	ENSOMYG00000020912	ENSOMYG00000020948	ENSOMYG00000020990	ENSOMYG00000020994	ENSOMYG00000021304	ENSOMYG00000022116	ENSOMYG00000031514	ENSOMYG00000022207	ubn2b (ENSOMYG00000022462)	trir (ENSOMYG00000022503) #18	HOOK2 (ENSOMYG00000022731) #21	junbb (ENSOMYG00000023473) #22	ENSOMYG00000069568	rtbdn (ENSOMYG00000023506) #25	MAST1 (ENSOMYG00000024088) #26	ENSOMYG00000027244	ENSOMYG00000027267	ENSOMYG00000027277	smarca4a (ENSOMYG00000027454)	ldlra (ENSOMYG00000028150)	kri1 (ENSOMYG00000028885)	spc24 (ENSOMYG00000028907)	s1pr5a (ENSOMYG00000028915)	CXCL8 (ENSOMYG00000028934)	foxd7 (ENSOMYG00000056670)	si:dkeyp-69e1.8 (ENSOMYG00000028962)	hmgxb4a (ENSOMYG00000029002)
Huchen	MODERN SPECIES	317	ENSHHUG00000036292	ENSHHUG00000036311	ENSHHUG00000036315	ENSHHUG00000036319	ENSHHUG00000036322	DDX39A (ENSHHUG00000036327)	ENSHHUG00000036396	txn2 (ENSHHUG00000036406)	MYH9 (ENSHHUG00000036440)	SLC25A38 (ENSHHUG00000038536)	rpsa (ENSHHUG00000038579)	TTC26 (ENSHHUG00000038651)	ubn2b (ENSHHUG00000038701)	trir (ENSHHUG00000038721) #18	HOOK2 (ENSHHUG00000038729) #21	junbb (ENSHHUG00000039017) #22	ENSHHUG00000039023	rtbdn (ENSHHUG00000039030) #25	MAST1 (ENSHHUG00000039044) #26	ENSHHUG00000039134 #26	ATG4D (ENSHHUG00000039142)	ENSHHUG00000039166	ENSHHUG00000039187	smarca4a (ENSHHUG00000039198)	ldlra (ENSHHUG00000039243)	kri1 (ENSHHUG00000039523)	spc24 (ENSHHUG00000039554)	s1pr5a (ENSHHUG00000039562)	ENSHHUG00000039565	foxd7 (ENSHHUG00000039586)	si:dkeyp-69e1.8 (ENSHHUG00000039593)
Northern pike	MODERN SPECIES	10	pkn1b (ENSELUG00000010494)	ENSELUG00000010531	ENSELUG00000010543	ENSELUG00000010551	DDX39A (ENSELUG00000010581)	ENSELUG00000010612	txn2 (ENSELUG00000010652)	MYH9 (ENSELUG00000010704)	slc25a38a (ENSELUG00000010718)	rpsa (ENSELUG00000010762)	TTC26 (ENSELUG00000010823)	ubn2b (ENSELUG00000010871)	trir (ENSELUG00000010844) #18	hook2 (ENSELUG00000010917) #21	ENSELUG00000010934	junbb (ENSELUG00000010952) #22	rtbdn (ENSELUG00000010978) #25	MAST1 (ENSELUG00000011095) #26	ATG4D (ENSELUG00000000396)	ENSELUG00000012213	SYT17 (ENSELUG00000012167)	clec19a (ENSELUG00000012124)	smg1 (ENSELUG00000012072)	arl6ip1 (ENSELUG00000011980)	ENSELUG00000029264	ENSELUG00000029433	ENSELUG00000011939	shmt1 (ENSELUG00000011924)	smcr8a (ENSELUG00000011865)	TOP3A (ENSELUG00000011817)	flii (ENSELUG00000011761)
Acanthomorphata	ANCESTRAL SPECIES	25	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Euacanthomorphacea	ANCESTRAL SPECIES	5	ENSGT00940000154990.fb.b	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Percomorphaceae	ANCESTRAL SPECIES	3	ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Tiger tail seahorse	MODERN SPECIES	506	ntn1b (ENSHCOG00000008994)	ENSHCOG00000009006	mfsd6l (ENSHCOG00000009008)	zgc:171844 (ENSHCOG00000009022)	tom1 (ENSHCOG00000009039)	gcat (ENSHCOG00000009094)	DDX39A (ENSHCOG00000009111)	ENSHCOG00000009120	txn2 (ENSHCOG00000009131)	MYH9 (ENSHCOG00000009201)	slc25a38a (ENSHCOG00000009218)	rpsa (ENSHCOG00000009232)	ubn2b (ENSHCOG00000009284)	trir (ENSHCOG00000009299) #18	hook2 (ENSHCOG00000009310) #21	junbb (ENSHCOG00000009342) #22	rtbdn (ENSHCOG00000009346) #25	ENSHCOG00000009379 #26	ENSHCOG00000009388	MAST1 (ENSHCOG00000009422) #26	ATG4D (ENSHCOG00000009439)	smarca4a (ENSHCOG00000009510)	ldlra (ENSHCOG00000009609)	kri1 (ENSHCOG00000009624)	spc24 (ENSHCOG00000009636)	s1pr5a (ENSHCOG00000009647)	SORCS2 (ENSHCOG00000009730)	ift57 (ENSHCOG00000009743)	SLC29A2 (ENSHCOG00000000638)	PPP1CB (ENSHCOG00000009767)	rela (ENSHCOG00000009779)
Percomorphaceae_B	ANCESTRAL SPECIES	2	ENSGT00940000154990.fb.b	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Ovalentaria	ANCESTRAL SPECIES	1	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Atherinomorphae	ANCESTRAL SPECIES	25	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000177737	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Oryzias	ANCESTRAL SPECIES		ENSGT00940000177182.b	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000177737	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Oryzias_b	ANCESTRAL SPECIES	42	ENSGT00940000168611	ENSGT00940000177182.b	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000177737	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT01000000214705	ENSGT00940000160728.j	ENSGT00390000003753	ENSGT00390000013260.A.b.a	ENSGT00950000182961.a.b.b	ENSGT00940000157534.a.b
Javanese ricefish	MODERN SPECIES	22	pglyrp6 (ENSOJAG00000000670)	trappc5 (ENSOJAG00000000680)	MCOLN1 (ENSOJAG00000000741)	ENSOJAG00000000770	pkn1b (ENSOJAG00000000819)	ENSOJAG00000000893	ENSOJAG00000000899	ENSOJAG00000000903	DDX39A (ENSOJAG00000000913)	ENSOJAG00000000920	txn2 (ENSOJAG00000000925)	slc25a38a (ENSOJAG00000001481)	RPSA (ENSOJAG00000001492)	ubn2b (ENSOJAG00000001517)	trir (ENSOJAG00000001541) #18	junbb (ENSOJAG00000001566) #22	rtbdn (ENSOJAG00000001580) #25	MAST1 (ENSOJAG00000001680) #26	ENSOJAG00000002140	ENSOJAG00000002150	GADD45GIP1 (ENSOJAG00000002181) #33	ENSOJAG00000002621	spc24 (ENSOJAG00000002675)	s1pr5a (ENSOJAG00000002679)	ENSOJAG00000002684	PLEKHF1 (ENSOJAG00000002687)	ENSOJAG00000002697	ENSOJAG00000002708	GPRC5D (ENSOJAG00000002725)	ENSOJAG00000002737	ENSOJAG00000002748
Indian medaka	MODERN SPECIES	9	MCOLN1 (ENSOMEG00000010012)	ENSOMEG00000009981	ENSOMEG00000009972	pkn1b (ENSOMEG00000009934)	ENSOMEG00000009823	ENSOMEG00000009801	DDX39A (ENSOMEG00000009789)	ENSOMEG00000009760	txn2 (ENSOMEG00000009745)	MYH9 (ENSOMEG00000009713)	slc25a38a (ENSOMEG00000009614)	rpsa (ENSOMEG00000009576)	ubn2b (ENSOMEG00000009511)	trir (ENSOMEG00000009480) #18	hook2 (ENSOMEG00000009418) #21	junbb (ENSOMEG00000009286) #22	rtbdn (ENSOMEG00000009277) #25	MAST1 (ENSOMEG00000009249) #26	foxd7 (ENSOMEG00000009211)	si:dkeyp-69e1.8 (ENSOMEG00000009192)	hmgxb4a (ENSOMEG00000009171)	ankrd54 (ENSOMEG00000009146)	foxred2 (ENSOMEG00000009123)	hmox1a (ENSOMEG00000009077)	mcm5 (ENSOMEG00000009046)	gcat (ENSOMEG00000008986)	tom1 (ENSOMEG00000008938)	zgc:171844 (ENSOMEG00000008764)	mfsd6l (ENSOMEG00000008731)	ENSOMEG00000008712	ntn1b (ENSOMEG00000001010)
Oryzias_a	ANCESTRAL SPECIES	20	ENSGT00940000177182.b	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00390000012267 #18	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00390000005605.i.b	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605.i.a	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Japanese Medaka HdrR	MODERN SPECIES	22	ENSORLG00000030221	ENSORLG00000022678	pkn1b (ENSORLG00000016312)	ENSORLG00000016288	ENSORLG00000026263	ENSORLG00000016274	trir (ENSORLG00000016259) #18	ubn2b (ENSORLG00000016256)	rpsa (ENSORLG00000016251)	slc25a38a (ENSORLG00000016238)	MYH9 (ENSORLG00000016200)	txn2 (ENSORLG00000015600)	ENSORLG00000026553	DDX39A (ENSORLG00000010565)	hook2 (ENSORLG00000015585) #21	junbb (ENSORLG00000021995) #22	ENSORLG00000024867	rtbdn (ENSORLG00000015528) #25	MAST1 (ENSORLG00000015521) #26	ENSORLG00000015500	ENSORLG00000015476	ENSORLG00000022176	smarca4a (ENSORLG00000015452)	ENSORLG00000025256	ENSORLG00000023944	ENSORLG00000022846	ENSORLG00000025742	ENSORLG00000029111	ENSORLG00000023163	ENSORLG00000015398	ENSORLG00000028274
Chinese medaka	MODERN SPECIES	400	trappc5 (ENSOSIG00000016551)	MCOLN1 (ENSOSIG00000016548)	ENSOSIG00000016544	pkn1b (ENSOSIG00000014447)	ENSOSIG00000014431	trir (ENSOSIG00000014430) #18	ubn2b (ENSOSIG00000014428)	rpsa (ENSOSIG00000014424)	slc25a38a (ENSOSIG00000014419)	MYH9 (ENSOSIG00000008234)	txn2 (ENSOSIG00000008194)	ENSOSIG00000008193	DDX39A (ENSOSIG00000008187)	ENSOSIG00000008185	hook2 (ENSOSIG00000005906) #21	junbb (ENSOSIG00000005874) #22	rtbdn (ENSOSIG00000005872) #25	MAST1 (ENSOSIG00000005001) #26
Cyprinodontiformes	ANCESTRAL SPECIES	3	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000177737	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Cyprinodontoidei	ANCESTRAL SPECIES	22	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000177737	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Poeciliinae	ANCESTRAL SPECIES	1	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000177737	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Poecilia	ANCESTRAL SPECIES	18	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000177737	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
NAME_6	ANCESTRAL SPECIES	40	ENSGT00940000177829	ENSGT00940000178069	ENSGT01040000241154	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000177737	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Amazon molly	MODERN SPECIES	364																junbb (ENSPFOG00000008616) #22	rtbdn (ENSPFOG00000008571) #25	ENSPFOG00000008245 #26	ATG4D (ENSPFOG00000008224)	smarca4a (ENSPFOG00000007892)	ldlra (ENSPFOG00000007522)	kri1 (ENSPFOG00000007297)	spc24 (ENSPFOG00000007227)	s1pr5a (ENSPFOG00000020948)	foxd7 (ENSPFOG00000020947)	si:dkeyp-69e1.8 (ENSPFOG00000007214)	hmgxb4a (ENSPFOG00000007097)	ankrd54 (ENSPFOG00000006969)	foxred2 (ENSPFOG00000006801)	hmox1a (ENSPFOG00000006716)	mcm5 (ENSPFOG00000006454)
Guppy	MODERN SPECIES	460	pkn1b (ENSPREG00000013849)	ENSPREG00000013960	ENSPREG00000013967	ENSPREG00000013976	DDX39A (ENSPREG00000013989)	ENSPREG00000014003	txn2 (ENSPREG00000014016)	MYH9 (ENSPREG00000014041)	slc25a38a (ENSPREG00000014185)	rpsa (ENSPREG00000014208)	ENSPREG00000014229	ubn2b (ENSPREG00000014253)	trir (ENSPREG00000014314) #18	hook2 (ENSPREG00000014349) #21	rtbdn (ENSPREG00000014383) #25	junbb (ENSPREG00000014425) #22	MAST1 (ENSPREG00000014461) #26	ATG4D (ENSPREG00000014549)	smarca4a (ENSPREG00000014608)	ldlra (ENSPREG00000014707)	kri1 (ENSPREG00000014731)	spc24 (ENSPREG00000014799)	s1pr5a (ENSPREG00000014811)	foxd7 (ENSPREG00000014826)	hmgxb4a (ENSPREG00000014834)	ankrd54 (ENSPREG00000014877)	foxred2 (ENSPREG00000014993)	hmox1a (ENSPREG00000015010)	ENSPREG00000015020	gcat (ENSPREG00000015026)	ENSPREG00000015041
NAME_4	ANCESTRAL SPECIES	77	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00940000177829	ENSGT00940000178069	ENSGT01040000240732	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G	ENSGT00940000155729
Mummichog	MODERN SPECIES	2245	ENSFHEG00000009552	ENSFHEG00000009563	pkn1b (ENSFHEG00000009637)	ENSFHEG00000009658	ENSFHEG00000009677	ENSFHEG00000009687	DDX39A (ENSFHEG00000009716)	ENSFHEG00000009726	txn2 (ENSFHEG00000009742)	MYH9 (ENSFHEG00000009825)	slc25a38a (ENSFHEG00000009834)	rpsa (ENSFHEG00000009847)	ubn2b (ENSFHEG00000009890)	trir (ENSFHEG00000009862) #18	hook2 (ENSFHEG00000009928) #21	junbb (ENSFHEG00000009954) #22	rtbdn (ENSFHEG00000009971) #25	MAST1 (ENSFHEG00000010045) #26	ATG4D (ENSFHEG00000010060)	smarca4a (ENSFHEG00000010182)	ldlra (ENSFHEG00000010208)	kri1 (ENSFHEG00000010230)	s1pr5a (ENSFHEG00000010242)	spc24 (ENSFHEG00000010254)	foxd7 (ENSFHEG00000010262)	si:dkeyp-69e1.8 (ENSFHEG00000010271)	hmgxb4a (ENSFHEG00000010296)	ankrd54 (ENSFHEG00000010317)	foxred2 (ENSFHEG00000010341)	hmox1a (ENSFHEG00000010353)	mcm5 (ENSFHEG00000010419)
Sheepshead minnow	MODERN SPECIES	302	pkn1b (ENSCVAG00000007594)	ENSCVAG00000007521	ENSCVAG00000007507	ENSCVAG00000007502	ENSCVAG00000007494	ENSCVAG00000007489	DDX39A (ENSCVAG00000007477)	ENSCVAG00000007450	txn2 (ENSCVAG00000007438)	MYH9 (ENSCVAG00000007422)	slc25a38a (ENSCVAG00000007346)	rpsa (ENSCVAG00000007308)	ubn2b (ENSCVAG00000007272)	trir (ENSCVAG00000007128) #18	hook2 (ENSCVAG00000000198) #21	junbb (ENSCVAG00000007096) #22	rtbdn (ENSCVAG00000000197) #25	ENSCVAG00000007061 #26	MAST1 (ENSCVAG00000000193) #26	ATG4D (ENSCVAG00000006993)	smarca4a (ENSCVAG00000006979)
Aplocheiloidei	ANCESTRAL SPECIES	30	ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Mangrove rivulus	MODERN SPECIES	37	ENSKMAG00000010974	pkn1b (ENSKMAG00000011042)	ENSKMAG00000011177	ENSKMAG00000011189	ENSKMAG00000011205	DDX39A (ENSKMAG00000011231)	ENSKMAG00000011264	txn2 (ENSKMAG00000011298)	MYH9 (ENSKMAG00000011387)	slc25a38a (ENSKMAG00000011567)	rpsa (ENSKMAG00000011591)	ubn2b (ENSKMAG00000011657)	trir (ENSKMAG00000011701) #18	ENSKMAG00000011717	hook2 (ENSKMAG00000011755) #21	junbb (ENSKMAG00000011813) #22	rtbdn (ENSKMAG00000011820) #25	ENSKMAG00000011834 #26	MAST1 (ENSKMAG00000011861) #26	ATG4D (ENSKMAG00000011884)	smarca4a (ENSKMAG00000011931)	ldlra (ENSKMAG00000012041)	kri1 (ENSKMAG00000012111)	spc24 (ENSKMAG00000012212)	s1pr5a (ENSKMAG00000012231)	foxd7 (ENSKMAG00000012240)	si:dkeyp-69e1.8 (ENSKMAG00000012252)	hmgxb4a (ENSKMAG00000012268)	ankrd54 (ENSKMAG00000012297)	foxred2 (ENSKMAG00000012353)	hmox1a (ENSKMAG00000012409)
Ovalentaria_B	ANCESTRAL SPECIES		ENSGT00940000177182	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Pomacentridae	ANCESTRAL SPECIES	31	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000178069	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Pomacentridae_A	ANCESTRAL SPECIES	21	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000178069	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a.c	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605.k	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Amphiprion	ANCESTRAL SPECIES	25	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000178069	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a.c	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605.k	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Clown anemonefish	MODERN SPECIES	1089						ENSAOCG00000007410	DDX39A (ENSAOCG00000007403)	ENSAOCG00000000394	txn2 (ENSAOCG00000007365)	MYH9 (ENSAOCG00000007343)	slc25a38a (ENSAOCG00000007235)	rpsa (ENSAOCG00000007195)	ubn2b (ENSAOCG00000007139)	trir (ENSAOCG00000007110) #18	hook2 (ENSAOCG00000007064) #21	junbb (ENSAOCG00000006682) #22	rtbdn (ENSAOCG00000006677) #25
Cichlidae	ANCESTRAL SPECIES	19	ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Pseudocrenilabrinae	ANCESTRAL SPECIES	1	ENSGT00940000177182	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00940000163467.a.b.b.b	ENSGT00390000017673.b.l
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	27	ENSGT00940000177182	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00940000163467.a.b.b.b	ENSGT00390000017673.b.l
Haplochromini	ANCESTRAL SPECIES	32	ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00940000163467.a.b.b.b	ENSGT00390000017673.b.l
Haplochromini_A	ANCESTRAL SPECIES	34	ENSGT00940000177182	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00940000163467.a.b.b.b	ENSGT00390000017673.b.l
Haplochromini_B	ANCESTRAL SPECIES	31	ENSGT00940000168611	ENSGT00940000177182	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00940000163467.a.b.b.b	ENSGT00390000017673.b.l
Eastern happy	MODERN SPECIES	16	ENSACLG00000001461	pkn1b (ENSACLG00000001314)	ENSACLG00000001293	ENSACLG00000001258	ENSACLG00000001247	DDX39A (ENSACLG00000001214)	ENSACLG00000001199	txn2 (ENSACLG00000001180)	MYH9 (ENSACLG00000001015)	slc25a38a (ENSACLG00000000983)	rpsa (ENSACLG00000000951)	ubn2b (ENSACLG00000000931)	trir (ENSACLG00000000917) #18	hook2 (ENSACLG00000000514) #21	ENSACLG00000000499	junbb (ENSACLG00000000469) #22	rtbdn (ENSACLG00000000460) #25	ENSACLG00000000427 #26	MAST1 (ENSACLG00000000372) #26	ATG4D (ENSACLG00000000346)	smarca4a (ENSACLG00000000163)	ldlra (ENSACLG00000000151)	kri1 (ENSACLG00000000135)	spc24 (ENSACLG00000000132)	s1pr5a (ENSACLG00000000124)	foxd7 (ENSACLG00000019118)	si:dkeyp-69e1.8 (ENSACLG00000019084)	hmgxb4a (ENSACLG00000019023)	ankrd54 (ENSACLG00000019008)	foxred2 (ENSACLG00000018978)	ENSACLG00000018971
Zebra mbuna	MODERN SPECIES	1107	ENSMZEG00005002492	ENSMZEG00005002505	pkn1b (ENSMZEG00005002537)	ENSMZEG00005002600	ENSMZEG00005002629	ENSMZEG00005002654	DDX39A (ENSMZEG00005002864)	ENSMZEG00005002911	txn2 (ENSMZEG00005002916)	MYH9 (ENSMZEG00005002935)	slc25a38a (ENSMZEG00005003047)	rpsa (ENSMZEG00005003155)	ubn2b (ENSMZEG00005003197)	trir (ENSMZEG00005003258) #18	hook2 (ENSMZEG00005003284) #21	junbb (ENSMZEG00005003658) #22	rtbdn (ENSMZEG00005003679) #25	ENSMZEG00005003701	MAST1 (ENSMZEG00005003727) #26	ATG4D (ENSMZEG00005003809)	smarca4a (ENSMZEG00005003889)	ldlra (ENSMZEG00005003998)	kri1 (ENSMZEG00005004013)	spc24 (ENSMZEG00005004038)	s1pr5a (ENSMZEG00005004045)	foxd7 (ENSMZEG00005004053)	si:dkeyp-69e1.8 (ENSMZEG00005004070)	hmgxb4a (ENSMZEG00005004079)	ankrd54 (ENSMZEG00005004094)	foxred2 (ENSMZEG00005004108)	ENSMZEG00005004130
P. nyererei	MODERN SPECIES	376	trappc5 (ENSPNYG00000001976)	MCOLN1 (ENSPNYG00000001876)	ENSPNYG00000001849	pkn1b (ENSPNYG00000001809)	ENSPNYG00000001775	ENSPNYG00000001563	DDX39A (ENSPNYG00000001498)	ENSPNYG00000001485	txn2 (ENSPNYG00000001465)	MYH9 (ENSPNYG00000001361)	slc25a38a (ENSPNYG00000001346)	rpsa (ENSPNYG00000001305)	ubn2b (ENSPNYG00000001273)	trir (ENSPNYG00000001295) #18	hook2 (ENSPNYG00000001067) #21	junbb (ENSPNYG00000001015) #22	rtbdn (ENSPNYG00000000986) #25	ENSPNYG00000000905 #26	MAST1 (ENSPNYG00000000851) #26	ATG4D (ENSPNYG00000000837)	smarca4a (ENSPNYG00000000717)	ldlra (ENSPNYG00000000697)	kri1 (ENSPNYG00000000553)	spc24 (ENSPNYG00000000511)	s1pr5a (ENSPNYG00000000501)	foxd7 (ENSPNYG00000000490)	si:dkeyp-69e1.8 (ENSPNYG00000000483)	hmgxb4a (ENSPNYG00000000445)	ankrd54 (ENSPNYG00000000428)	foxred2 (ENSPNYG00000000407)	ENSPNYG00000000401
Burton s mouthbrooder	MODERN SPECIES	350	MCOLN1 (ENSHBUG00000000595)	ENSHBUG00000020107	pkn1b (ENSHBUG00000000612)	ENSHBUG00000020204	ENSHBUG00000020215	ENSHBUG00000000615	DDX39A (ENSHBUG00000020257)	ENSHBUG00000020272	txn2 (ENSHBUG00000020290)	MYH9 (ENSHBUG00000020558)	slc25a38a (ENSHBUG00000020594)	rpsa (ENSHBUG00000020630)	trir (ENSHBUG00000000633) #18	ubn2b (ENSHBUG00000020646)	hook2 (ENSHBUG00000020665) #21	junbb (ENSHBUG00000020693) #22	rtbdn (ENSHBUG00000020722) #25	ENSHBUG00000020862 #26	MAST1 (ENSHBUG00000020881) #26	ATG4D (ENSHBUG00000020894)	smarca4a (ENSHBUG00000021172)	ldlra (ENSHBUG00000021197)	kri1 (ENSHBUG00000021212)	spc24 (ENSHBUG00000021224)	s1pr5a (ENSHBUG00000021232)	foxd7 (ENSHBUG00000021244)	si:dkeyp-69e1.8 (ENSHBUG00000021253)	hmgxb4a (ENSHBUG00000021327)	ankrd54 (ENSHBUG00000021341)	foxred2 (ENSHBUG00000021404)	ENSHBUG00000021412
Lyretail cichlid	MODERN SPECIES	423	MCOLN1 (ENSNBRG00000010214)	ENSNBRG00000010264	ENSNBRG00000010276	pkn1b (ENSNBRG00000010293)	ENSNBRG00000010335	ENSNBRG00000010351	ENSNBRG00000010417	DDX39A (ENSNBRG00000010679)	ENSNBRG00000010711	MYH9 (ENSNBRG00000010730)	slc25a38a (ENSNBRG00000010824)	rpsa (ENSNBRG00000010854)	ubn2b (ENSNBRG00000010895)	trir (ENSNBRG00000010941) #18	hook2 (ENSNBRG00000010993) #21	junbb (ENSNBRG00000011282) #22	rtbdn (ENSNBRG00000011306) #25	MAST1 (ENSNBRG00000011320) #26	ATG4D (ENSNBRG00000011391)	smarca4a (ENSNBRG00000011457)	ldlra (ENSNBRG00000011554)	kri1 (ENSNBRG00000011580)	spc24 (ENSNBRG00000011610)	s1pr5a (ENSNBRG00000011662)	foxd7 (ENSNBRG00000011668)	si:dkeyp-69e1.8 (ENSNBRG00000011683)	hmgxb4a (ENSNBRG00000011693)	ankrd54 (ENSNBRG00000011732)	foxred2 (ENSNBRG00000011754)	ENSNBRG00000011779	hmox1a (ENSNBRG00000011786)
Nile tilapia	MODERN SPECIES	16	ENSONIG00000040059	ENSONIG00000031168	pkn1b (ENSONIG00000008107)	ENSONIG00000008110	ENSONIG00000008115	ENSONIG00000028312	DDX39A (ENSONIG00000036607)	ENSONIG00000008125	txn2 (ENSONIG00000008126)	MYH9 (ENSONIG00000008128)	slc25a38a (ENSONIG00000008160)	rpsa (ENSONIG00000008163)	ubn2b (ENSONIG00000008172)	trir (ENSONIG00000038123) #18	hook2 (ENSONIG00000008175) #21	junbb (ENSONIG00000021072) #22	rtbdn (ENSONIG00000008184) #25	MAST1 (ENSONIG00000008189) #26	ATG4D (ENSONIG00000043096)	smarca4a (ENSONIG00000008196)	ldlra (ENSONIG00000008214)	kri1 (ENSONIG00000008218)	spc24 (ENSONIG00000008221)	s1pr5a (ENSONIG00000021073)	foxd7 (ENSONIG00000041330)	si:dkeyp-69e1.8 (ENSONIG00000008223)	hmgxb4a (ENSONIG00000008225)	ankrd54 (ENSONIG00000008226)	foxred2 (ENSONIG00000008228)	ENSONIG00000021075	hmox1a (ENSONIG00000036898)
Midas cichlid	MODERN SPECIES	80	MCOLN1 (ENSACIG00000020592)	ENSACIG00000020612	ENSACIG00000020625	pkn1b (ENSACIG00000020637)	ENSACIG00000020666	ENSACIG00000020690	DDX39A (ENSACIG00000020898)	ENSACIG00000020913	txn2 (ENSACIG00000020923)	MYH9 (ENSACIG00000020930)	slc25a38a (ENSACIG00000020998)	rpsa (ENSACIG00000021049)	ubn2b (ENSACIG00000021073)	trir (ENSACIG00000021095) #18	hook2 (ENSACIG00000021128) #21	junbb (ENSACIG00000021369) #22	rtbdn (ENSACIG00000021389) #25	MAST1 (ENSACIG00000021403) #26	ATG4D (ENSACIG00000021464)	smarca4a (ENSACIG00000021550)	ldlra (ENSACIG00000021617)	kri1 (ENSACIG00000021726)	spc24 (ENSACIG00000021764)	s1pr5a (ENSACIG00000021777)	foxd7 (ENSACIG00000021788)	si:dkeyp-69e1.8 (ENSACIG00000021792)	hmgxb4a (ENSACIG00000021800)	ankrd54 (ENSACIG00000021835)	foxred2 (ENSACIG00000021951)	hmox1a (ENSACIG00000021980)	mcm5 (ENSACIG00000022193)
Percomorphaceae_C	ANCESTRAL SPECIES		ENSGT00940000154990.fb.b	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT01040000241154	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Eupercaria	ANCESTRAL SPECIES	3	ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Eupecaria_A	ANCESTRAL SPECIES	5	ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Ballan wrasse	MODERN SPECIES	656							ENSLBEG00000002887	DDX39A (ENSLBEG00000002817)	ENSLBEG00000002442	txn2 (ENSLBEG00000002376)	MYH9 (ENSLBEG00000002253)	slc25a38a (ENSLBEG00000002195)	rpsa (ENSLBEG00000002111)	trir (ENSLBEG00000002083) #18	hook2 (ENSLBEG00000001999) #21	junbb (ENSLBEG00000001962) #22
Eupecaria_B	ANCESTRAL SPECIES		ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Perciformes	ANCESTRAL SPECIES	1	ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Cottioidei	ANCESTRAL SPECIES	1	ENSGT00940000167287	ENSGT00940000160257	ENSGT00940000164506.b.b	ENSGT00390000008812.b.b.b	ENSGT00530000064085.d	ENSGT00940000157917.b	ENSGT00940000155510	ENSGT00940000162682.B.b	ENSGT00950000182818.A	ENSGT00940000164511.C	ENSGT01060000248595.b.a.b.b.a.a	ENSGT00510000048192	ENSGT00940000160609.f	ENSGT00940000166981	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Lumpfish	MODERN SPECIES	23	epor (ENSCLMG00005021267)	ENSCLMG00005021268	ZNF653 (ENSCLMG00005021269)	tspan35 (ENSCLMG00005021271)	CDK5R1 (ENSCLMG00005004238)	NSF (ENSCLMG00005004256)	thraa (ENSCLMG00005004517)	ENSCLMG00005004765	prl (ENSCLMG00005004773)	ENSCLMG00005004778	ENSCLMG00005004872	pih1d1 (ENSCLMG00005010731)	tnnt1 (ENSCLMG00005010732)	syt5a (ENSCLMG00005010737)	hook2 (ENSCLMG00005010761) #21	junbb (ENSCLMG00005014979) #22	rtbdn (ENSCLMG00005014980) #25	MAST1 (ENSCLMG00005014982) #26	ATG4D (ENSCLMG00005015166)	smarca4a (ENSCLMG00005015175)	ldlra (ENSCLMG00005015217)	kri1 (ENSCLMG00005016257)	spc24 (ENSCLMG00005016259)	s1pr5a (ENSCLMG00005016260)	foxd7 (ENSCLMG00005016261)	si:dkeyp-69e1.8 (ENSCLMG00005016262)	hmgxb4a (ENSCLMG00005016263)	ankrd54 (ENSCLMG00005016265)	foxred2 (ENSCLMG00005016267)	hmox1a (ENSCLMG00005016269)	mcm5 (ENSCLMG00005016272)
Stickleback	MODERN SPECIES	10	swsap1 (ENSGACG00000006482)	ZNF653 (ENSGACG00000006483)	tspan35 (ENSGACG00000006494)	CDK5R1 (ENSGACG00000006504)	nsfa (ENSGACG00000006514)	thraa (ENSGACG00000006540)	ENSGACG00000006554	dusp3b (ENSGACG00000006555)	prl (ENSGACG00000006561)	ENSGACG00000006598	ENSGACG00000006606	pih1d1 (ENSGACG00000006615)	tnnt1 (ENSGACG00000006626)	syt5a (ENSGACG00000006630)	hook2 (ENSGACG00000006640) #21	junbb (ENSGACG00000006654) #22	rtbdn (ENSGACG00000006658) #25	MAST1 (ENSGACG00000006669) #26	ENSGACG00000006688	smarca4a (ENSGACG00000006691)	ldlra (ENSGACG00000006705)	kri1 (ENSGACG00000006712)	spc24 (ENSGACG00000006733)	s1pr5a (ENSGACG00000006737)	si:dkeyp-69e1.8 (ENSGACG00000006740)	hmgxb4a (ENSGACG00000006744)	ankrd54 (ENSGACG00000006757)	foxred2 (ENSGACG00000006763)	hmox1a (ENSGACG00000006771)	mcm5 (ENSGACG00000006776)	tom1 (ENSGACG00000006786)
Perciformes_a	ANCESTRAL SPECIES	1	ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00390000012267 #18	ENSGT00940000155858.e	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Channel bull blenny	MODERN SPECIES	22	MCOLN1 (ENSCGOG00000003887)	ENSCGOG00000024170	pkn1b (ENSCGOG00000023819)	ENSCGOG00000023739	ENSCGOG00000023738	ENSCGOG00000023737	DDX39A (ENSCGOG00000023561)	ENSCGOG00000023535	txn2 (ENSCGOG00000023533)	MYH9 (ENSCGOG00000018703)	slc25a38a (ENSCGOG00000018575)	rpsa (ENSCGOG00000018572)	trir (ENSCGOG00000018567) #18	ubn2b (ENSCGOG00000018563)	hook2 (ENSCGOG00000017755) #21	junbb (ENSCGOG00000017729) #22	rtbdn (ENSCGOG00000017728) #25	MAST1 (ENSCGOG00000016453) #26	ATG4D (ENSCGOG00000016428)	smarca4a (ENSCGOG00000012016)	ldlra (ENSCGOG00000011766)	kri1 (ENSCGOG00000011712)	spc24 (ENSCGOG00000011708)	s1pr5a (ENSCGOG00000011705)	foxd7 (ENSCGOG00000011699)	si:dkeyp-69e1.8 (ENSCGOG00000011695)	hmgxb4a (ENSCGOG00000011687)	ankrd54 (ENSCGOG00000011675)	foxred2 (ENSCGOG00000011637)	hmox1a (ENSCGOG00000011632)	mcm5 (ENSCGOG00000011316)
Pike perch	MODERN SPECIES	38															hook2 (ENSSLUG00000016658) #21	junbb (ENSSLUG00000017793) #22	rtbdn (ENSSLUG00000017798) #25	MAST1 (ENSSLUG00000017811) #26	ATG4D (ENSSLUG00000017825)	smarca4a (ENSSLUG00000017847)	ldlra (ENSSLUG00000018042)	kri1 (ENSSLUG00000005522)	spc24 (ENSSLUG00000005537)	s1pr5a (ENSSLUG00000005546)	foxd7 (ENSSLUG00000005557)	si:dkeyp-69e1.8 (ENSSLUG00000005562)	hmgxb4a (ENSSLUG00000005569)	ankrd54 (ENSSLUG00000005577)	foxred2 (ENSSLUG00000005588)	hmox1a (ENSSLUG00000005599)	mcm5 (ENSSLUG00000005621)
Eupecaria_C	ANCESTRAL SPECIES	17	ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	26	ENSGT00940000177182	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
European seabass	MODERN SPECIES	21	ENSDLAG00005017994	ENSDLAG00005018028	ENSDLAG00005018854	pkn1b (ENSDLAG00005018963)	ENSDLAG00005029706	ENSDLAG00005022163	ENSDLAG00005022168	ENSDLAG00005022175	ENSDLAG00005022196	ENSDLAG00005022198	ENSDLAG00005022268	ENSDLAG00005033984	ubn2b (ENSDLAG00005024137)	trir (ENSDLAG00005030948) #18	hook2 (ENSDLAG00005024232) #21	junbb (ENSDLAG00005024718) #22	rtbdn (ENSDLAG00005029809) #25	MAST1 (ENSDLAG00005024754) #26	ENSDLAG00005024911	smarca4a (ENSDLAG00005024921)	ldlra (ENSDLAG00005025005)	kri1 (ENSDLAG00005025407)	spc24 (ENSDLAG00005025414)	s1pr5a (ENSDLAG00005034138)	foxd7 (ENSDLAG00005030410)	si:dkeyp-69e1.8 (ENSDLAG00005025420)	ankrd54 (ENSDLAG00005025423)	foxred2 (ENSDLAG00005025435)	hmox1a (ENSDLAG00005025440)	mcm5 (ENSDLAG00005025443)	gcat (ENSDLAG00005025460)
Large yellow croaker	MODERN SPECIES	483	ENSLCRG00005008673	pkn1b (ENSLCRG00005002886)	ENSLCRG00005002709	ENSLCRG00005015640	ENSLCRG00005015638	DDX39A (ENSLCRG00005015615)	ENSLCRG00005015611	ENSLCRG00005015610	txn2 (ENSLCRG00005015609)	MYH9 (ENSLCRG00005015007)	slc25a38a (ENSLCRG00005014981)	ubn2b (ENSLCRG00005014980)	trir (ENSLCRG00005014979) #18	rpsa (ENSLCRG00005014977)	hook2 (ENSLCRG00005012442) #21	junbb (ENSLCRG00005012411) #22	rtbdn (ENSLCRG00005012410) #25	MAST1 (ENSLCRG00005010704) #26	ATG4D (ENSLCRG00005010693)	smarca4a (ENSLCRG00005010550)	mapk11 (ENSLCRG00005010317)	mapk12b (ENSLCRG00005010201)	ENSLCRG00005010189	rpap3 (ENSLCRG00005010185)	atp23 (ENSLCRG00005010181)	lrig3 (ENSLCRG00005009932)	zgc:165507 (ENSLCRG00005009929)	TAFA2 (ENSLCRG00005009926)	ENSLCRG00005009923	si:ch73-252i11.1 (ENSLCRG00005009918)	TIMP3 (ENSLCRG00005009912)
Gilthead seabream	MODERN SPECIES	15	MCOLN1 (ENSSAUG00010023796)	ENSSAUG00010023811	pkn1b (ENSSAUG00010023829)	ENSSAUG00010024589	ENSSAUG00010024591	ENSSAUG00010024592	DDX39A (ENSSAUG00010024594)	ENSSAUG00010024600	txn2 (ENSSAUG00010024601)	MYH9 (ENSSAUG00010024631)	slc25a38a (ENSSAUG00010025186)	rpsa (ENSSAUG00010025190)	ubn2b (ENSSAUG00010025195)	trir (ENSSAUG00010025196) #18	hook2 (ENSSAUG00010025205) #21	junbb (ENSSAUG00010025234) #22	rtbdn (ENSSAUG00010025236) #25	MAST1 (ENSSAUG00010025250) #26	ATG4D (ENSSAUG00010025435)	smarca4a (ENSSAUG00010025438)	ldlra (ENSSAUG00010025481)	kri1 (ENSSAUG00010025845)	spc24 (ENSSAUG00010025850)	s1pr5a (ENSSAUG00010025851)	foxd7 (ENSSAUG00010025853)	si:dkeyp-69e1.8 (ENSSAUG00010025854)	hmgxb4a (ENSSAUG00010025855)	ankrd54 (ENSSAUG00010025857)	foxred2 (ENSSAUG00010025858)	hmox1a (ENSSAUG00010025859)	mcm5 (ENSSAUG00010025861)
Percomorphaceae_D	ANCESTRAL SPECIES	1	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Anabantaria	ANCESTRAL SPECIES	6	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Zig-zag eel	MODERN SPECIES	22	pkn1b (ENSMAMG00000010409)	ENSMAMG00000026048	ENSMAMG00000010390	ENSMAMG00000026146	ENSMAMG00000027988	ENSMAMG00000024601	ENSMAMG00000009916	ENSMAMG00000009908	ENSMAMG00000009898	ENSMAMG00000009822	ENSMAMG00000009813	ENSMAMG00000009789	trir (ENSMAMG00000009782) #18	ubn2b (ENSMAMG00000009736)	hook2 (ENSMAMG00000009671) #21	junbb (ENSMAMG00000025546) #22	rtbdn (ENSMAMG00000009461) #25	MAST1 (ENSMAMG00000009392) #26	ENSMAMG00000009380	ENSMAMG00000009256	ENSMAMG00000009228	fam234b (ENSMAMG00000009213)	ENSMAMG00000009151	rrp7a (ENSMAMG00000009125)	wbp2nl (ENSMAMG00000009102)	ENSMAMG00000009094	ENSMAMG00000028475	ENSMAMG00000009043	ENSMAMG00000009035	GSG1 (ENSMAMG00000009024)	EMP1 (ENSMAMG00000009018)
Anabantoidei	ANCESTRAL SPECIES	7	ENSGT00940000177182	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT01030000234881	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l
Climbing perch	MODERN SPECIES	21	ENSATEG00000012403	ENSATEG00000029121	pkn1b (ENSATEG00000012314)	ENSATEG00000012283	ENSATEG00000012271	ENSATEG00000012098	ENSATEG00000027489	ENSATEG00000012040	ENSATEG00000026238	ENSATEG00000011896	ENSATEG00000011864	ENSATEG00000011829	ubn2b (ENSATEG00000011798)	trir (ENSATEG00000011822) #18	hook2 (ENSATEG00000011779) #21	junbb (ENSATEG00000026800) #22	ENSATEG00000028219	MAST1 (ENSATEG00000011656) #26	ENSATEG00000011639	smarca4a (ENSATEG00000011524)	ENSATEG00000011473	ldlra (ENSATEG00000011318)	kri1 (ENSATEG00000011294)	spc24 (ENSATEG00000025331)	s1pr5a (ENSATEG00000011280)	ENSATEG00000011261	foxd7 (ENSATEG00000011254)	si:dkeyp-69e1.8 (ENSATEG00000028983)	hmgxb4a (ENSATEG00000011233)	ankrd54 (ENSATEG00000011200)	foxred2 (ENSATEG00000011159)
Siamese fighting fish	MODERN SPECIES	19	ilf3b (ENSBSLG00000004353)	ptger1b (ENSBSLG00000004461)	WIZ (ENSBSLG00000004466)	pglyrp6 (ENSBSLG00000004477)	trappc5 (ENSBSLG00000004508)	ENSBSLG00000004533	ENSBSLG00000004536	txn2 (ENSBSLG00000004538)	ENSBSLG00000004589	ENSBSLG00000006249	ENSBSLG00000006252	ENSBSLG00000006253	rpsa (ENSBSLG00000006254)	trir (ENSBSLG00000006271) #18	hook2 (ENSBSLG00000006692) #21	junbb (ENSBSLG00000007355) #22	rtbdn (ENSBSLG00000007358) #25	ENSBSLG00000007367 #26	ATG4D (ENSBSLG00000007413)	smarca4a (ENSBSLG00000007418)	ldlra (ENSBSLG00000007510)	kri1 (ENSBSLG00000007526)	spc24 (ENSBSLG00000007535)	s1pr5a (ENSBSLG00000007536)	foxd7 (ENSBSLG00000007540)	si:dkeyp-69e1.8 (ENSBSLG00000007541)	hmgxb4a (ENSBSLG00000007543)	ENSBSLG00000007547	ankrd54 (ENSBSLG00000007549)	hmox1a (ENSBSLG00000007561)	mcm5 (ENSBSLG00000007575)
Carangaria	ANCESTRAL SPECIES	4	ENSGT00940000177182	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Carangaria_A	ANCESTRAL SPECIES	12	ENSGT00390000000976.d.b	ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Seriola	ANCESTRAL SPECIES	23	ENSGT00390000002077	ENSGT00390000020164	ENSGT00940000166743	ENSGT00940000157339	ENSGT00390000015973	ENSGT00940000157340.k.b	ENSGT00390000018898	ENSGT00390000017489.a	ENSGT00530000063694.b	ENSGT00390000018868.A	ENSGT00940000161324.h.b	ENSGT00390000018482	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT00940000157140.b.b.b	ENSGT00940000165343.c.b	ENSGT00390000012436.g	ENSGT00940000157805	ENSGT00640000091519	ENSGT00390000017673.b.l	ENSGT01050000244824.G
Yellowtail amberjack	MODERN SPECIES	3214	kdelr3 (ENSSLDG00000024878)	ENSSLDG00000024868	CCDC134 (ENSSLDG00000024853)	ENSSLDG00000024850	srebf2 (ENSSLDG00000024831)	nol12 (ENSSLDG00000024826)	triobpb (ENSSLDG00000024817)	ndufa6 (ENSSLDG00000024789)	SMDT1 (ENSSLDG00000024784)	fam234b (ENSSLDG00000024774)	POLDIP3 (ENSSLDG00000024763)	rrp7a (ENSSLDG00000024758)	ubn2b (ENSSLDG00000024732)	trir (ENSSLDG00000024724) #18	hook2 (ENSSLDG00000024683) #21	junbb (ENSSLDG00000024674) #22	rtbdn (ENSSLDG00000024661) #25	ENSSLDG00000024651 #26	MAST1 (ENSSLDG00000024572) #26	ATG4D (ENSSLDG00000024552)	smarca4a (ENSSLDG00000024486)	ldlra (ENSSLDG00000024476)	kri1 (ENSSLDG00000024449)	spc24 (ENSSLDG00000024439)	s1pr5a (ENSSLDG00000024435)	foxd7 (ENSSLDG00000024433)	si:dkeyp-69e1.8 (ENSSLDG00000024430)	hmgxb4a (ENSSLDG00000024411)	ankrd54 (ENSSLDG00000024403)	foxred2 (ENSSLDG00000024389)	hmox1a (ENSSLDG00000024376)
Greater amberjack	MODERN SPECIES	225	MEI1 (ENSSDUG00000016653)	CCDC134 (ENSSDUG00000016718)	ENSSDUG00000016736	srebf2 (ENSSDUG00000016742)	nol12 (ENSSDUG00000016769)	triobpb (ENSSDUG00000016789)	ndufa6 (ENSSDUG00000016818)	SMDT1 (ENSSDUG00000016826)	fam234b (ENSSDUG00000016835)	POLDIP3 (ENSSDUG00000016881)	ENSSDUG00000016940	rrp7a (ENSSDUG00000016921)	ubn2b (ENSSDUG00000016985)	trir (ENSSDUG00000017089) #18	hook2 (ENSSDUG00000017095) #21	junbb (ENSSDUG00000017119) #22	rtbdn (ENSSDUG00000017125) #25	MAST1 (ENSSDUG00000017147) #26	ATG4D (ENSSDUG00000017265)	smarca4a (ENSSDUG00000017298)	ldlra (ENSSDUG00000017366)	kri1 (ENSSDUG00000017395)	spc24 (ENSSDUG00000017432)	s1pr5a (ENSSDUG00000017452)	foxd7 (ENSSDUG00000017459)	si:dkeyp-69e1.8 (ENSSDUG00000017466)	hmgxb4a (ENSSDUG00000017480)	ankrd54 (ENSSDUG00000017492)	foxred2 (ENSSDUG00000017501)	hmox1a (ENSSDUG00000017522)	mcm5 (ENSSDUG00000017539)
Barramundi perch	MODERN SPECIES	138	trappc5 (ENSLCAG00010016517)	MCOLN1 (ENSLCAG00010016537)	ENSLCAG00010016553	pkn1b (ENSLCAG00010016723)	ENSLCAG00010017331	ENSLCAG00010017334	DDX39A (ENSLCAG00010017350)	ENSLCAG00010017382	txn2 (ENSLCAG00010017386)	MYH9 (ENSLCAG00010017682)	slc25a38a (ENSLCAG00010019948)	rpsa (ENSLCAG00010019953)	ubn2b (ENSLCAG00010019976)	trir (ENSLCAG00010019994) #18	hook2 (ENSLCAG00010020100) #21	junbb (ENSLCAG00010020403) #22	rtbdn (ENSLCAG00010020407) #25	MAST1 (ENSLCAG00010020419) #26	ATG4D (ENSLCAG00010020427)	ENSLCAG00010020430	smarca4a (ENSLCAG00010020479)	ldlra (ENSLCAG00010020566)	kri1 (ENSLCAG00010020932)	spc24 (ENSLCAG00010020940)	s1pr5a (ENSLCAG00010020943)	foxd7 (ENSLCAG00010020945)	si:dkeyp-69e1.8 (ENSLCAG00010020962)	hmgxb4a (ENSLCAG00010020965)	ankrd54 (ENSLCAG00010020969)	foxred2 (ENSLCAG00010020974)	hmox1a (ENSLCAG00010020980)
Pleuronectoidei	ANCESTRAL SPECIES	2	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d #26	ENSGT00950000183144.B #25	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00390000012267 #18	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT01100000263705	ENSGT00940000177182	ENSGT00940000168611
Tongue sole	MODERN SPECIES	8	tom1 (ENSCSEG00000014540)	mfsd6l (ENSCSEG00000014552)	ENSCSEG00000014558	ntn1b (ENSCSEG00000014566)	si:dkeyp-69e1.8 (ENSCSEG00000014574)	foxd7 (ENSCSEG00000014582)	s1pr5a (ENSCSEG00000014590)	spc24 (ENSCSEG00000014595)	kri1 (ENSCSEG00000014632)	ldlra (ENSCSEG00000014678)	smarca4a (ENSCSEG00000014771)	ATG4D (ENSCSEG00000014816)	MAST1 (ENSCSEG00000014975) #26	rtbdn (ENSCSEG00000014991) #25	ENSCSEG00000015003	junbb (ENSCSEG00000015048) #22	trir (ENSCSEG00000015054) #18	ubn2b (ENSCSEG00000015063)	rpsa (ENSCSEG00000015086)	slc25a38a (ENSCSEG00000015201)	MYH9 (ENSCSEG00000015246)	ENSCSEG00000015385	txn2 (ENSCSEG00000015391)	ENSCSEG00000015397	ENSCSEG00000015409	DDX39A (ENSCSEG00000015474)	ENSCSEG00000015487	tnnt1 (ENSCSEG00000015502)	pih1d1 (ENSCSEG00000015518)	CPT1C (ENSCSEG00000015628)	ENSCSEG00000015655
Turbot	MODERN SPECIES	10	foxred2 (ENSSMAG00000003473)	ankrd54 (ENSSMAG00000003542)	ENSSMAG00000034140	hmgxb4a (ENSSMAG00000003433)	si:dkeyp-69e1.8 (ENSSMAG00000003420)	foxd7 (ENSSMAG00000003416)	s1pr5a (ENSSMAG00000003411)	spc24 (ENSSMAG00000025121)	kri1 (ENSSMAG00000003342)	ldlra (ENSSMAG00000003321)	smarca4a (ENSSMAG00000003200)	ENSSMAG00000003181	ENSSMAG00000003147 #26	rtbdn (ENSSMAG00000003131) #25	ENSSMAG00000003103 #21	ENSSMAG00000003094 #22	ENSSMAG00000023842 #18	ENSSMAG00000002993	ENSSMAG00000002885	txn2 (ENSSMAG00000002868)	ENSSMAG00000002861	ENSSMAG00000002831	ENSSMAG00000002816	ENSSMAG00000002798	ENSSMAG00000002778	pkn1b (ENSSMAG00000002589)	ENSSMAG00000002575	ENSSMAG00000002559	ENSSMAG00000002524	ENSSMAG00000031563	pglyrp6 (ENSSMAG00000002509)
Pinecone sodierfish	MODERN SPECIES	22	ENSMMDG00005021668	pkn1b (ENSMMDG00005021575)	ENSMMDG00005021533	ENSMMDG00005021529	ENSMMDG00005021527	DDX39A (ENSMMDG00005021494)	ENSMMDG00005021478	txn2 (ENSMMDG00005021474)	MYH9 (ENSMMDG00005019553)	slc25a38a (ENSMMDG00005019340)	rpsa (ENSMMDG00005019334)	TTC26 (ENSMMDG00005019320)	ubn2b (ENSMMDG00005019309)	trir (ENSMMDG00005019306) #18	hook2 (ENSMMDG00005019286) #21	junbb (ENSMMDG00005019271) #22	rtbdn (ENSMMDG00005019269) #25	ENSMMDG00005019264 #26	ATG4D (ENSMMDG00005019261)	ENSMMDG00005019256	smarca4a (ENSMMDG00005010874)	ldlra (ENSMMDG00005006489)	kri1 (ENSMMDG00005006438)	spc24 (ENSMMDG00005006434)	s1pr5a (ENSMMDG00005006433)	foxd7 (ENSMMDG00005006431)	si:dkeyp-69e1.8 (ENSMMDG00005006430)	hmgxb4a (ENSMMDG00005006426)	ankrd54 (ENSMMDG00005006413)	foxred2 (ENSMMDG00005006400)	hmox1a (ENSMMDG00005006394)
Cod	MODERN SPECIES	11	ENSGMOG00000009744	ENSGMOG00000029700	pkn1b (ENSGMOG00000010775)	ENSGMOG00000036073	ENSGMOG00000032601	ENSGMOG00000026219	ENSGMOG00000011287	ENSGMOG00000032786	txn2 (ENSGMOG00000027676)	ENSGMOG00000011235	slc25a38a (ENSGMOG00000011227)	ENSGMOG00000033837	ubn2b (ENSGMOG00000011209)	trir (ENSGMOG00000034793) #18	hook2 (ENSGMOG00000018181) #21	junbb (ENSGMOG00000002596) #22	rtbdn (ENSGMOG00000028213) #25	MAST1 (ENSGMOG00000002538) #26	ENSGMOG00000035221	ENSGMOG00000035020	smarca4a (ENSGMOG00000002649)	ldlra (ENSGMOG00000002735)	kri1 (ENSGMOG00000002769)	spc24 (ENSGMOG00000002830)	si:dkeyp-69e1.8 (ENSGMOG00000025395)	hmgxb4a (ENSGMOG00000004531)	ankrd54 (ENSGMOG00000004561)	foxred2 (ENSGMOG00000004592)	ENSGMOG00000036899	ENSGMOG00000027468	ENSGMOG00000003180
Neopterygii	ANCESTRAL SPECIES	86	ENSGT00940000160315	ENSGT00940000167287	ENSGT00940000160257	ENSGT00940000164506	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.a.b ##35	ENSGT00390000012078.a.b #32	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00530000063000.a.a.b	ENSGT00940000156887	ENSGT00940000161046	ENSGT00390000005584	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00390000005147	ENSGT00940000161143	ENSGT00470000042444	ENSGT00940000157140.b.b	ENSGT00940000166140
Osteoglossocephalai	ANCESTRAL SPECIES	86																ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00390000010768 #24	ENSGT00950000183144.B #25	ENSGT00940000157700 #26	ENSGT00530000063000.a.a.b	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00940000165948	ENSGT00940000159543	ENSGT00940000161143	ENSGT00470000042444	ENSGT00940000157140.b.b.b	ENSGT00940000166140	ENSGT00940000165343	ENSGT00390000012436.g
Clupeocephala	ANCESTRAL SPECIES	5	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.a.a #22	ENSGT00390000004368	ENSGT00940000157552.s.a	ENSGT00940000164506.b.a	ENSGT00530000063926.b #34	ENSGT00950000182916.a.b.a.a.a.b.a.a ##35	ENSGT00940000163721	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.b.b	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a.j	ENSGT01050000244887.A.a.a.a.i	ENSGT00940000161143	ENSGT00470000042444	ENSGT00940000157140.b.b.b	ENSGT00940000166140
Euteleosteomorpha	ANCESTRAL SPECIES	136														ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT01030000234857	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Acanthomorphata	ANCESTRAL SPECIES	44	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.b.a	ENSGT00940000159979.a.b	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00390000012668.g.a	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT01030000234857	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Percomorphaceae	ANCESTRAL SPECIES	20	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Tiger tail seahorse	MODERN SPECIES	382	GPR78 (ENSHCOG00000018691)	CPZ (ENSHCOG00000018774)	hmx4 (ENSHCOG00000018783)	hmx1 (ENSHCOG00000018801)	adra2c (ENSHCOG00000018813)	lrpap1 (ENSHCOG00000018818)	DOK7 (ENSHCOG00000018836)	rgs12b (ENSHCOG00000018923)	rgs12b (ENSHCOG00000019013)	htt (ENSHCOG00000019192)	grk4 (ENSHCOG00000019618)	ENSHCOG00000019634	ENSHCOG00000019734	get3 (ENSHCOG00000019744) #19	BEST2 (ENSHCOG00000019780) #20	JUNB (ENSHCOG00000019803) #22	prdx2 (ENSHCOG00000000531)	ptger1a (ENSHCOG00000019818)	pi4k2a (ENSHCOG00000019860)	ENSHCOG00000019874	exosc1 (ENSHCOG00000019882)	ENSHCOG00000019887	gprc5bb (ENSHCOG00000019896)	ENSHCOG00000019907	ENSHCOG00000020044	TSC2 (ENSHCOG00000020228)	NTHL1 (ENSHCOG00000020273)	ENSHCOG00000020383	TNPO2 (ENSHCOG00000020440) #17	ENSHCOG00000020459	RFX1 (ENSHCOG00000020466)
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Carangaria	ANCESTRAL SPECIES		ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Carangaria_A	ANCESTRAL SPECIES	24	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Seriola	ANCESTRAL SPECIES	11	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000163234.a.b.h.a.a.b	ENSGT00940000163454.a.a.a.a	ENSGT00940000163454.a.a.b	ENSGT00950000183130.A	ENSGT00990000204378	ENSGT00390000008828.fb.b	ENSGT00950000183201.b.a.b	ENSGT00950000183174.B.a.e	ENSGT00950000183035.b.f	ENSGT00940000157338.a	ENSGT00530000063725.o.x.a.b	ENSGT00530000063725.o.x.a.a	ENSGT00530000063725.o.x.b	ENSGT00950000182933.B.b
Yellowtail amberjack	MODERN SPECIES	2529													ENSSLDG00000020966	get3 (ENSSLDG00000020950) #19	BEST2 (ENSSLDG00000020934) #20	JUNB (ENSSLDG00000020923) #22	prdx2 (ENSSLDG00000020901)	ENSSLDG00000020778	ENSSLDG00000020648	ENSSLDG00000020626	ENSSLDG00000020612	exosc9 (ENSSLDG00000020591)	ENSSLDG00000020527	scoca (ENSSLDG00000020501)	ENSSLDG00000020486	naa15b (ENSSLDG00000020447)
Greater amberjack	MODERN SPECIES	20	hmx1 (ENSSDUG00000001607)	adra2c (ENSSDUG00000001616)	ENSSDUG00000001633	ENSSDUG00000001656	lrpap1 (ENSSDUG00000001679)	DOK7 (ENSSDUG00000001709)	rgs12b (ENSSDUG00000001752)	rgs12b (ENSSDUG00000001792)	htt (ENSSDUG00000001834)	grk4 (ENSSDUG00000001998)	ENSSDUG00000002042	TOM1 (ENSSDUG00000002052)	ENSSDUG00000002077	get3 (ENSSDUG00000002155) #19	BEST2 (ENSSDUG00000002175) #20	JUNB (ENSSDUG00000002207) #22	prdx2 (ENSSDUG00000002224)	ENSSDUG00000002244	ENSSDUG00000002258	ENSSDUG00000002277	ENSSDUG00000002289	exosc9 (ENSSDUG00000002313)	ENSSDUG00000002378	scoca (ENSSDUG00000002404)	ENSSDUG00000002425	naa15b (ENSSDUG00000002446)	ENSSDUG00000002520	AXIN2 (ENSSDUG00000002553)	ENSSDUG00000002640	ENSSDUG00000002802	ENSSDUG00000003053
Barramundi perch	MODERN SPECIES	123					ENSLCAG00010020752	lrpap1 (ENSLCAG00010020758)	ENSLCAG00010020761	rgs12b (ENSLCAG00010020767)	htt (ENSLCAG00010020902)	grk4 (ENSLCAG00010021260)	ENSLCAG00010021349	ENSLCAG00010021347	ENSLCAG00010021355	get3 (ENSLCAG00010021362) #19	BEST2 (ENSLCAG00010021368) #20	JUNB (ENSLCAG00010021372) #22	prdx2 (ENSLCAG00010021381)	ENSLCAG00010021410	ptger1a (ENSLCAG00010021415)	ilf3a (ENSLCAG00010021417)	acp5a (ENSLCAG00010021426)	syce2 (ENSLCAG00010021432)	gcdha (ENSLCAG00010021446) #29	SLC44A2 (ENSLCAG00010021493)	odad3 (ENSLCAG00010021509)	ENSLCAG00010000208	ENSLCAG00010000242	klf1 (ENSLCAG00010000248)	ENSLCAG00010000252	ENSLCAG00010000259	ENSLCAG00010000275
Pleuronectoidei	ANCESTRAL SPECIES	22	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000158116.a.a #29	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231	ENSGT00940000156057.s.a
Turbot	MODERN SPECIES	20	ENSSMAG00000016016	htra3a (ENSSMAG00000016048)	GPR78 (ENSSMAG00000016134)	ENSSMAG00000016110	hmx4 (ENSSMAG00000016154)	hmx1 (ENSSMAG00000016158)	adra2c (ENSSMAG00000016188)	lrpap1 (ENSSMAG00000016192)	rgs12b (ENSSMAG00000016246)	htt (ENSSMAG00000016361)	ENSSMAG00000016536	ENSSMAG00000016589	ENSSMAG00000016601	GET3 (ENSSMAG00000016622) #19	ENSSMAG00000016640 #20	JUNB (ENSSMAG00000016696) #22	ENSSMAG00000024275	ENSSMAG00000033239	ENSSMAG00000016738
Tongue sole	MODERN SPECIES	19	GPR78 (ENSCSEG00000013891)	htra3a (ENSCSEG00000013897)	pi4k2b (ENSCSEG00000013924)	zgc:195282 (ENSCSEG00000013954)	ENSCSEG00000013967	ENSCSEG00000013985	chrna6 (ENSCSEG00000013997)	rgs12b (ENSCSEG00000014005)	htt (ENSCSEG00000014042)	grk4 (ENSCSEG00000014109)	TOM1 (ENSCSEG00000014121)	ENSCSEG00000014134	get3 (ENSCSEG00000014163) #19	BEST2 (ENSCSEG00000014171) #20	PRDX2 (ENSCSEG00000014187) #23	JUNB (ENSCSEG00000014195) #22	ENSCSEG00000014206	ptger1a (ENSCSEG00000014229)	ilf3a (ENSCSEG00000014239)	acp5a (ENSCSEG00000014263)	gcdha (ENSCSEG00000014268) #29	SLC44A2 (ENSCSEG00000014299)	odad3 (ENSCSEG00000014343)	ENSCSEG00000014349	nfil3-5 (ENSCSEG00000014363)	ENSCSEG00000014374	ENSCSEG00000014400	IGFBP4 (ENSCSEG00000014412)	SMARCE1 (ENSCSEG00000014417)	ccr7 (ENSCSEG00000014429)	TNS4 (ENSCSEG00000014434)
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Zig-zag eel	MODERN SPECIES		ENSMAMG00000007533	htra3a (ENSMAMG00000007558)	GPR78 (ENSMAMG00000007591)	CPZ (ENSMAMG00000007609)	hmx4 (ENSMAMG00000007635)	adra2c (ENSMAMG00000007663)	lrpap1 (ENSMAMG00000007680)	DOK7 (ENSMAMG00000007706)	rgs12b (ENSMAMG00000007722)	htt (ENSMAMG00000007774)	ENSMAMG00000007889	ENSMAMG00000007935	ENSMAMG00000007961	GET3 (ENSMAMG00000007977) #19	ENSMAMG00000026142 #20	JUNB (ENSMAMG00000007999) #22	ENSMAMG00000024765	ENSMAMG00000008051	ptger1a (ENSMAMG00000008071)	ilf3a (ENSMAMG00000008086)	acp5a (ENSMAMG00000025635)	ENSMAMG00000027091	ENSMAMG00000008149	ENSMAMG00000008205	ENSMAMG00000008218	nfil3-5 (ENSMAMG00000008250)	ENSMAMG00000008258	klf1 (ENSMAMG00000008262)	ENSMAMG00000008274	ENSMAMG00000008291	ENSMAMG00000008358
Anabantoidei	ANCESTRAL SPECIES		ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Climbing perch	MODERN SPECIES		ENSATEG00000022379	htra3a (ENSATEG00000022357)	ENSATEG00000022347	ENSATEG00000022334	hmx4 (ENSATEG00000022324)	adra2c (ENSATEG00000022306)	lrpap1 (ENSATEG00000022292)	ENSATEG00000022277	rgs12b (ENSATEG00000022250)	htt (ENSATEG00000022168)	ENSATEG00000022131	ENSATEG00000022114	ENSATEG00000022122	GET3 (ENSATEG00000022098) #19	ENSATEG00000022089 #20	JUNB (ENSATEG00000022080) #22	ENSATEG00000022076	ENSATEG00000022072	ptger1a (ENSATEG00000022063)	ilf3a (ENSATEG00000022036)	acp5a (ENSATEG00000022004)	ENSATEG00000022000	gcdha (ENSATEG00000021968) #29	ENSATEG00000029051	ENSATEG00000021900	ENSATEG00000021852	nfil3-5 (ENSATEG00000021847)	ENSATEG00000021841	klf1 (ENSATEG00000021838)	ENSATEG00000021827	ENSATEG00000021807
Siamese fighting fish	MODERN SPECIES		htra3a (ENSBSLG00000001770)	GPR78 (ENSBSLG00000002142)	CPZ (ENSBSLG00000002156)	hmx4 (ENSBSLG00000002175)	hmx1 (ENSBSLG00000002184)	adra2c (ENSBSLG00000002197)	lrpap1 (ENSBSLG00000002246)	DOK7 (ENSBSLG00000002273)	rgs12b (ENSBSLG00000002372)	htt (ENSBSLG00000002810)	grk4 (ENSBSLG00000003225)	ENSBSLG00000003275	ENSBSLG00000003278	get3 (ENSBSLG00000003281) #19	BEST2 (ENSBSLG00000003285) #20	JUNB (ENSBSLG00000003296) #22	prdx2 (ENSBSLG00000003298)	ENSBSLG00000003299	ptger1a (ENSBSLG00000003302)	ENSBSLG00000003303	ENSBSLG00000003306	ilf3a (ENSBSLG00000003311)	acp5a (ENSBSLG00000003315)	gcdha (ENSBSLG00000003323) #29	SLC44A2 (ENSBSLG00000003360)	ENSBSLG00000003379	ENSBSLG00000003380	ENSBSLG00000003382	nfil3-5 (ENSBSLG00000003388)	ENSBSLG00000003390	klf1 (ENSBSLG00000003391)
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Tetraodontidae	ANCESTRAL SPECIES	16	ENSGT00390000010434.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000159979.a.b.g	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A.f	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Tetraodon	MODERN SPECIES	10	pi4k2b (ENSTNIG00000012041)	GPR78 (ENSTNIG00000012042)	CPZ (ENSTNIG00000012043)	hmx4 (ENSTNIG00000012044)	hmx1 (ENSTNIG00000012045)	adra2c (ENSTNIG00000012046)	lrpap1 (ENSTNIG00000012047)	DOK7 (ENSTNIG00000012048)	rgs12b (ENSTNIG00000012049)	htt (ENSTNIG00000012050)	grk4 (ENSTNIG00000012051)	ENSTNIG00000012052	ENSTNIG00000001287	get3 (ENSTNIG00000012053) #19	BEST2 (ENSTNIG00000012054) #20	JUNB (ENSTNIG00000012055) #22	ENSTNIG00000012056	ENSTNIG00000012057	ptger1a (ENSTNIG00000012058)	ilf3a (ENSTNIG00000012059)	acp5a (ENSTNIG00000012060)	ENSTNIG00000006249	ENSTNIG00000012061	gcdha (ENSTNIG00000012062) #29	SLC44A2 (ENSTNIG00000012063)	ENSTNIG00000012064	nfil3-5 (ENSTNIG00000002293)	ENSTNIG00000012065	cep20 (ENSTNIG00000012066)	ENSTNIG00000012067	coq7 (ENSTNIG00000012068)
Fugu	MODERN SPECIES	8	zgc:195282 (ENSTRUG00000027022)	pi4k2b (ENSTRUG00000007830)	ENSTRUG00000020573	GPR78 (ENSTRUG00000008133)	CPZ (ENSTRUG00000008143)	hmx4 (ENSTRUG00000022220)	hmx1 (ENSTRUG00000027441)	adra2c (ENSTRUG00000003591)	lrpap1 (ENSTRUG00000003927)	rgs12b (ENSTRUG00000004546)	htt (ENSTRUG00000005174)	grk4 (ENSTRUG00000005782)	ENSTRUG00000006160	get3 (ENSTRUG00000006720) #19	BEST2 (ENSTRUG00000006936) #20	junB (ENSTRUG00000007102) #22	PRDX2 (ENSTRUG00000022392) #23	ENSTRUG00000007298	ptger1a (ENSTRUG00000007446)	ilf3a (ENSTRUG00000007594)	acp5a (ENSTRUG00000008163)	ENSTRUG00000023141	gcdha (ENSTRUG00000008257) #29	SLC44A2 (ENSTRUG00000008525)	odad3 (ENSTRUG00000008682)	ENSTRUG00000008810	nfil3-5 (ENSTRUG00000009543)	ENSTRUG00000009549	klf1 (ENSTRUG00000009569)	ENSTRUG00000009577	ENSTRUG00000009581
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Ballan wrasse	MODERN SPECIES	162	ENSLBEG00000012243	ENSLBEG00000012204	ENSLBEG00000012176	pi4k2b (ENSLBEG00000012106)	CPZ (ENSLBEG00000012057)	hmx4 (ENSLBEG00000012035)	adra2c (ENSLBEG00000012011)	lrpap1 (ENSLBEG00000011961)	DOK7 (ENSLBEG00000011935)	rgs12b (ENSLBEG00000011866)	htt (ENSLBEG00000011611)	grk4 (ENSLBEG00000011520)	TOM1 (ENSLBEG00000011472)	get3 (ENSLBEG00000011402) #19	BEST2 (ENSLBEG00000011341) #20	JUNB (ENSLBEG00000011307) #22	prdx2 (ENSLBEG00000011277)	ENSLBEG00000011180	ptger1a (ENSLBEG00000011132)	ilf3a (ENSLBEG00000011047)	acp5a (ENSLBEG00000010964)	syce2 (ENSLBEG00000010939)	gcdha (ENSLBEG00000010860) #29
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Eupecaria_C	ANCESTRAL SPECIES	22	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	21	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
European seabass	MODERN SPECIES	20	ENSDLAG00005018497	ENSDLAG00005018531	htra3a (ENSDLAG00005019101)	ENSDLAG00005032964	hmx4 (ENSDLAG00005019124)	hmx1 (ENSDLAG00005009552)	adra2c (ENSDLAG00005009553)	lrpap1 (ENSDLAG00005009557)	DOK7 (ENSDLAG00005031650)	htt (ENSDLAG00005009695)	GRK4 (ENSDLAG00005013426)	ENSDLAG00005014162	ENSDLAG00005014181	GET3 (ENSDLAG00005014187) #19	ENSDLAG00005014214 #20	JUNB (ENSDLAG00005026551) #22	ENSDLAG00005014336	ENSDLAG00005014358	ptger1a (ENSDLAG00005014387)	ilf3a (ENSDLAG00005014393)	acp5a (ENSDLAG00005014439)	ENSDLAG00005027632	gcdha (ENSDLAG00005014480) #29	ENSDLAG00005014774	ENSDLAG00005015942	odad3 (ENSDLAG00005015945)	ENSDLAG00005015957	nfil3-5 (ENSDLAG00005032213)	ENSDLAG00005016003	klf1 (ENSDLAG00005016005)	ENSDLAG00005016012
Large yellow croaker	MODERN SPECIES	481	htra3a (ENSLCRG00005011352)	GPR78 (ENSLCRG00005011353)	CPZ (ENSLCRG00005011355)	hmx4 (ENSLCRG00005011364)	hmx1 (ENSLCRG00005011365)	adra2c (ENSLCRG00005011367)	lrpap1 (ENSLCRG00005011373)	DOK7 (ENSLCRG00005011390)	rgs12b (ENSLCRG00005011400)	htt (ENSLCRG00005011492)	grk4 (ENSLCRG00005015278)	ENSLCRG00005016614	ENSLCRG00005016617	get3 (ENSLCRG00005016618) #19	BEST2 (ENSLCRG00005016626) #20	JUNB (ENSLCRG00005016653) #22	prdx2 (ENSLCRG00005016655)	ENSLCRG00005016656	ptger1a (ENSLCRG00005016658)	ilf3a (ENSLCRG00005016660)	acp5a (ENSLCRG00005016663)	ENSLCRG00005016667	syce2 (ENSLCRG00005016668)	gcdha (ENSLCRG00005016670) #29	SLC44A2 (ENSLCRG00005016688)	odad3 (ENSLCRG00005017649)	ENSLCRG00005017652	nfil3-5 (ENSLCRG00005000258)	ENSLCRG00005000262	klf1 (ENSLCRG00005000265)	si:dkey-43k4.3 (ENSLCRG00005000267)
Gilthead seabream	MODERN SPECIES		GPR78 (ENSSAUG00010025922)	CPZ (ENSSAUG00010025919)	hmx4 (ENSSAUG00010025916)	hmx1 (ENSSAUG00010025914)	ENSSAUG00010025913	adra2c (ENSSAUG00010025910)	lrpap1 (ENSSAUG00010025897)	DOK7 (ENSSAUG00010025892)	rgs12b (ENSSAUG00010025891)	htt (ENSSAUG00010023607)	grk4 (ENSSAUG00010022133)	ENSSAUG00010022115	ENSSAUG00010022114	get3 (ENSSAUG00010022113) #19	BEST2 (ENSSAUG00010022089) #20	JUNB (ENSSAUG00010022085) #22	prdx2 (ENSSAUG00010022084)	ENSSAUG00010022082	ptger1a (ENSSAUG00010022081)	ilf3a (ENSSAUG00010022079)	acp5a (ENSSAUG00010022076)	syce2 (ENSSAUG00010022073)	gcdha (ENSSAUG00010021893) #29	ENSSAUG00010021882	SLC44A2 (ENSSAUG00010021400)	odad3 (ENSSAUG00010021376)	ENSSAUG00010021375	nfil3-5 (ENSSAUG00010021374)	ENSSAUG00010021373	klf1 (ENSSAUG00010021371)	ENSSAUG00010021369
Perciformes	ANCESTRAL SPECIES	2	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00390000010434.a	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Lumpfish	MODERN SPECIES		zgc:195282 (ENSCLMG00005019110)	pi4k2b (ENSCLMG00005018802)	ENSCLMG00005018796	CPZ (ENSCLMG00005018640)	hmx4 (ENSCLMG00005018633)	adra2c (ENSCLMG00005018631)	lrpap1 (ENSCLMG00005018628)	ENSCLMG00005018627	ENSCLMG00005018625	htt (ENSCLMG00005009329)	grk4 (ENSCLMG00005003477)	ENSCLMG00005003461	ENSCLMG00005003460	get3 (ENSCLMG00005003457) #19	ENSCLMG00005003455 #20	JUNB (ENSCLMG00005003454) #22	prdx2 (ENSCLMG00005003450)	ENSCLMG00005003449	ENSCLMG00005003448	ptger1a (ENSCLMG00005003446)	ilf3a (ENSCLMG00005003444)	acp5a (ENSCLMG00005003442)	syce2 (ENSCLMG00005003440)	gcdha (ENSCLMG00005003182) #29	ENSCLMG00005003174	SLC44A2 (ENSCLMG00005002690)	odad3 (ENSCLMG00005002687)	ENSCLMG00005002684	nfil3-5 (ENSCLMG00005002683)	ENSCLMG00005002682	klf1 (ENSCLMG00005002681)
Stickleback	MODERN SPECIES	4	ENSGACG00000019045	aspscr1 (ENSGACG00000019046)	NOTUM (ENSGACG00000019047)	TMC6 (ENSGACG00000019048)	TMC8 (ENSGACG00000019054)	ENSGACG00000019059	syngr2b (ENSGACG00000019060)	tk1 (ENSGACG00000019062)	afmid (ENSGACG00000019065)	ENSGACG00000019070	ENSGACG00000019073	ENSGACG00000019074	ENSGACG00000019090	get3 (ENSGACG00000019091) #19	BEST2 (ENSGACG00000019093) #20	JUNB (ENSGACG00000019095) #22	prdx2 (ENSGACG00000019097)	ENSGACG00000019100	ENSGACG00000019102	ptger1a (ENSGACG00000019103)	ilf3a (ENSGACG00000019106)	acp5a (ENSGACG00000019109)	gcdha (ENSGACG00000019112) #29	SLC44A2 (ENSGACG00000019122)	odad3 (ENSGACG00000019131)	ENSGACG00000019135	nfil3-5 (ENSGACG00000019140)	ENSGACG00000019141	klf1 (ENSGACG00000019143)	ENSGACG00000019144	MICALL1 (ENSGACG00000019146)
Perciformes_a	ANCESTRAL SPECIES		ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Pike perch	MODERN SPECIES	63	stn1 (ENSSLUG00000018075)	SH3PXD2A (ENSSLUG00000018080)	ENSSLUG00000018087	adra2c (ENSSLUG00000018090)	ENSSLUG00000018095	ENSSLUG00000018102	lrpap1 (ENSSLUG00000018107)	DOK7 (ENSSLUG00000018110)	rgs12b (ENSSLUG00000018117)	htt (ENSSLUG00000018247)	grk4 (ENSSLUG00000019186)	ENSSLUG00000019725	ENSSLUG00000019728	get3 (ENSSLUG00000019732) #19	ENSSLUG00000019742 #20	JUNB (ENSSLUG00000019747) #22	prdx2 (ENSSLUG00000019751)	ENSSLUG00000019760	ptger1a (ENSSLUG00000019765)	ENSSLUG00000019770	ENSSLUG00000019779	acp5a (ENSSLUG00000019782)	syce2 (ENSSLUG00000010267)	gcdha (ENSSLUG00000010303) #29	SLC44A2 (ENSSLUG00000010623)	ENSSLUG00000010836	odad3 (ENSSLUG00000010838)	ENSSLUG00000010846	nfil3-5 (ENSSLUG00000010853)	ENSSLUG00000010857	klf1 (ENSSLUG00000010859)
Ovalentaria	ANCESTRAL SPECIES		ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT01030000234857	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT01030000234857.d	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Haplochromini	ANCESTRAL SPECIES	3	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT01030000234857.d	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Burton s mouthbrooder	DUPLICATION
Burton s mouthbrooder	MODERN SPECIES	752				hmx4 (ENSHBUG00000015274)	hmx1 (ENSHBUG00000015266)	adra2c (ENSHBUG00000015264)	lrpap1 (ENSHBUG00000015242)	DOK7 (ENSHBUG00000015210)	rgs12b (ENSHBUG00000015201)	htt (ENSHBUG00000015132)	grk4 (ENSHBUG00000014937)	TOM1 (ENSHBUG00000014674)	ENSHBUG00000014656	get3 (ENSHBUG00000014650) #19	BEST2 (ENSHBUG00000014625) #20	JUNB (ENSHBUG00000014546) #22	prdx2 (ENSHBUG00000014537)
Burton s mouthbrooder	MODERN SPECIES	337															prdx2 (ENSHBUG00000021733)	JUNB (ENSHBUG00000000670) #22	ENSHBUG00000021703	ptger1a (ENSHBUG00000021681)	ilf3a (ENSHBUG00000021671)	acp5a (ENSHBUG00000021642)	ENSHBUG00000021628	ENSHBUG00000021615	gcdha (ENSHBUG00000021595) #29	SLC44A2 (ENSHBUG00000021553)	ENSHBUG00000021474	ENSHBUG00000021462	nfil3-5 (ENSHBUG00000021443)	ENSHBUG00000021439	klf1 (ENSHBUG00000021433)	ENSHBUG00000021428	ENSHBUG00000021418
Haplochromini_A	ANCESTRAL SPECIES	2	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231	ENSGT00940000156057.s.a
P. nyererei	MODERN SPECIES	360	htra3a (ENSPNYG00000006766)	GPR78 (ENSPNYG00000006747)	CPZ (ENSPNYG00000006710)	hmx4 (ENSPNYG00000006693)	hmx1 (ENSPNYG00000006683)	adra2c (ENSPNYG00000006662)	lrpap1 (ENSPNYG00000006616)	DOK7 (ENSPNYG00000006598)	rgs12b (ENSPNYG00000006544)	htt (ENSPNYG00000006391)	grk4 (ENSPNYG00000006353)	ENSPNYG00000006330	ENSPNYG00000006321	get3 (ENSPNYG00000006310) #19	BEST2 (ENSPNYG00000006279) #20	JUNB (ENSPNYG00000006268) #22	prdx2 (ENSPNYG00000006252)	ENSPNYG00000006231	ptger1a (ENSPNYG00000006220)	ENSPNYG00000006208	ilf3a (ENSPNYG00000006196)	acp5a (ENSPNYG00000006179)	ENSPNYG00000006161	ENSPNYG00000006132	gcdha (ENSPNYG00000006084) #29	SLC44A2 (ENSPNYG00000006026)	ENSPNYG00000005966	ENSPNYG00000005895	nfil3-5 (ENSPNYG00000005883)	ENSPNYG00000005873	klf1 (ENSPNYG00000005866)
Haplochromini_B	ANCESTRAL SPECIES	23	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231	ENSGT00940000156057.s.a
Zebra mbuna	MODERN SPECIES	1109	htra3a (ENSMZEG00005010653)	GPR78 (ENSMZEG00005010642)	CPZ (ENSMZEG00005010626)	hmx4 (ENSMZEG00005010622)	hmx1 (ENSMZEG00005010619)	adra2c (ENSMZEG00005010586)	lrpap1 (ENSMZEG00005010562)	DOK7 (ENSMZEG00005010507)	rgs12b (ENSMZEG00005010483)	htt (ENSMZEG00005010394)	grk4 (ENSMZEG00005010337)	ENSMZEG00005010309	ENSMZEG00005010303	get3 (ENSMZEG00005010290) #19	BEST2 (ENSMZEG00005010253) #20	JUNB (ENSMZEG00005010241) #22	prdx2 (ENSMZEG00005010228)	ENSMZEG00005010219	ptger1a (ENSMZEG00005010198)	ilf3a (ENSMZEG00005010179)	acp5a (ENSMZEG00005010165)	ENSMZEG00005010158	gcdha (ENSMZEG00005010144) #29	SLC44A2 (ENSMZEG00005010068)	ENSMZEG00005010047	ENSMZEG00005010025	nfil3-5 (ENSMZEG00005010014)	ENSMZEG00005010009	klf1 (ENSMZEG00005010007)	ENSMZEG00005009996	ENSMZEG00005009981
Eastern happy	MODERN SPECIES	18	hmx4 (ENSACLG00000014348)	hmx1 (ENSACLG00000014358)	adra2c (ENSACLG00000014448)	lrpap1 (ENSACLG00000014459)	DOK7 (ENSACLG00000014478)	lrpap1 (ENSACLG00000014518)	rgs12b (ENSACLG00000014545)	rgs12b (ENSACLG00000014610)	htt (ENSACLG00000014713)	grk4 (ENSACLG00000014891)	ENSACLG00000014958	ENSACLG00000014971	get3 (ENSACLG00000014981) #19	BEST2 (ENSACLG00000015006) #20	prdx2 (ENSACLG00000015108)	JUNB (ENSACLG00000015132) #22	ENSACLG00000015145	ptger1a (ENSACLG00000015224)	ilf3a (ENSACLG00000015240)	acp5a (ENSACLG00000015286)	ENSACLG00000015310	ENSACLG00000015322	gcdha (ENSACLG00000015337) #29	ENSACLG00000015445	SLC44A2 (ENSACLG00000015456)	odad3 (ENSACLG00000015527)	ENSACLG00000015574	nfil3-5 (ENSACLG00000015675)	ENSACLG00000015679	klf1 (ENSACLG00000015686)	ENSACLG00000015715
Lyretail cichlid	MODERN SPECIES	308	GPR78 (ENSNBRG00000018773)	hmx4 (ENSNBRG00000018950)	hmx1 (ENSNBRG00000018962)	adra2c (ENSNBRG00000018978)	lrpap1 (ENSNBRG00000019013)	ENSNBRG00000019053	rgs12b (ENSNBRG00000019085)	htt (ENSNBRG00000019193)	grk4 (ENSNBRG00000019361)	ENSNBRG00000019393	ENSNBRG00000019405	ENSNBRG00000019431	get3 (ENSNBRG00000019444) #19	BEST2 (ENSNBRG00000019480) #20	prdx2 (ENSNBRG00000019533)	JUNB (ENSNBRG00000019555) #22	ENSNBRG00000019584	ptger1a (ENSNBRG00000019613)	ENSNBRG00000019628	ENSNBRG00000019638	acp5a (ENSNBRG00000019657)	ENSNBRG00000019670	ENSNBRG00000019685	gcdha (ENSNBRG00000019713) #29	SLC44A2 (ENSNBRG00000019745)	ENSNBRG00000019817	ENSNBRG00000019922	nfil3-5 (ENSNBRG00000019951)	ENSNBRG00000019958	ENSNBRG00000019975	ENSNBRG00000019986
Nile tilapia	MODERN SPECIES	18	htra3a (ENSONIG00000003510)	GPR78 (ENSONIG00000003517)	CPZ (ENSONIG00000003519)	hmx4 (ENSONIG00000003523)	hmx1 (ENSONIG00000003525)	ENSONIG00000042486	lrpap1 (ENSONIG00000018941)	ENSONIG00000041167	rgs12b (ENSONIG00000018936)	htt (ENSONIG00000018930)	grk4 (ENSONIG00000018926)	ENSONIG00000018919	ENSONIG00000021170	get3 (ENSONIG00000018917) #19	BEST2 (ENSONIG00000018916) #20	JUNB (ENSONIG00000032540) #22	prdx2 (ENSONIG00000032411)	ENSONIG00000018912	ptger1a (ENSONIG00000018911)	ilf3a (ENSONIG00000018907)	acp5a (ENSONIG00000018906)	ENSONIG00000030270	gcdha (ENSONIG00000018903) #29	SLC44A2 (ENSONIG00000018897)	ENSONIG00000018893	nfil3-5 (ENSONIG00000042714)	ENSONIG00000018890	klf1 (ENSONIG00000018889)	ENSONIG00000018888	ENSONIG00000018887	gga1 (ENSONIG00000018882)
Midas cichlid	MODERN SPECIES	815	pi4k2b (ENSACIG00000005966)	htra3a (ENSACIG00000005992)	GPR78 (ENSACIG00000006019)	CPZ (ENSACIG00000006029)	hmx4 (ENSACIG00000006054)	hmx1 (ENSACIG00000006061)	adra2c (ENSACIG00000006076)	lrpap1 (ENSACIG00000006083)	DOK7 (ENSACIG00000006102)	rgs12b (ENSACIG00000006131)	htt (ENSACIG00000006179)	grk4 (ENSACIG00000006365)	TOM1 (ENSACIG00000006678)	get3 (ENSACIG00000006704) #19	BEST2 (ENSACIG00000006723) #20	JUNB (ENSACIG00000006741) #22	prdx2 (ENSACIG00000006761)	ENSACIG00000006782	ptger1a (ENSACIG00000006810)	ENSACIG00000006832	ENSACIG00000006845	acp5a (ENSACIG00000006864)	ENSACIG00000006935	syce2 (ENSACIG00000006943)	gcdha (ENSACIG00000006964) #29	SLC44A2 (ENSACIG00000007004)	ENSACIG00000007058	odad3 (ENSACIG00000007080)	ENSACIG00000007182	nfil3-5 (ENSACIG00000007257)	ENSACIG00000007284
Pomacentridae	ANCESTRAL SPECIES	20	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a.d #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Pomacentridae_A	ANCESTRAL SPECIES	13	ENSGT00390000010434.a	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00940000164407.a.a	ENSGT00390000015863.e	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a.d #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Amphiprion	ANCESTRAL SPECIES		ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00940000169433.a.a.d.c.a.b	ENSGT00390000004855	ENSGT00940000164407.a.a	ENSGT00390000015863.e	ENSGT00940000160151	ENSGT00940000163454.a.a.b.h	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a.d #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Clown anemonefish	MODERN SPECIES	814											ENSAOCG00000000868	TOM1 (ENSAOCG00000013847)	ENSAOCG00000013859	get3 (ENSAOCG00000013878) #19	BEST2 (ENSAOCG00000013919) #20	JUNB (ENSAOCG00000013960) #22	prdx2 (ENSAOCG00000013981)	ENSAOCG00000013997	ptger1a (ENSAOCG00000000881)
Orange clownfish	MODERN SPECIES	17	hmx4 (ENSAPEG00000016841)	hmx1 (ENSAPEG00000016848)	adra2c (ENSAPEG00000016898)	ENSAPEG00000016921	lrpap1 (ENSAPEG00000016946)	rgs12b (ENSAPEG00000017006)	rgs12b (ENSAPEG00000017051)	htt (ENSAPEG00000017146)	grk4 (ENSAPEG00000017372)	ENSAPEG00000017465	TOM1 (ENSAPEG00000017528)	ENSAPEG00000017582	get3 (ENSAPEG00000017591) #19	BEST2 (ENSAPEG00000017620) #20	prdx2 (ENSAPEG00000017643)	JUNB (ENSAPEG00000017692) #22	ENSAPEG00000017723	ptger1a (ENSAPEG00000017755)	ilf3a (ENSAPEG00000017767)	acp5a (ENSAPEG00000017778)	ENSAPEG00000017790	ENSAPEG00000017794	gcdha (ENSAPEG00000017809) #29	SLC44A2 (ENSAPEG00000017877)	ENSAPEG00000018012	odad3 (ENSAPEG00000018045)	ENSAPEG00000018118	nfil3-5 (ENSAPEG00000018133)	ENSAPEG00000018137	ENSAPEG00000018145	ENSAPEG00000018161
Spiny chromis	MODERN SPECIES	1544										ENSAPOG00000010867	grk4 (ENSAPOG00000010939)	ENSAPOG00000011046	TOM1 (ENSAPOG00000000308)	get3 (ENSAPOG00000011127) #19	BEST2 (ENSAPOG00000011192) #20	JUNB (ENSAPOG00000011236) #22	prdx2 (ENSAPOG00000011273)	ENSAPOG00000011287	ptger1a (ENSAPOG00000011294)	ENSAPOG00000011349	ENSAPOG00000011375
Bicolor damselfish	MODERN SPECIES	346	GPR78 (ENSSPAG00000007507)	CPZ (ENSSPAG00000007490)	hmx4 (ENSSPAG00000007479)	hmx1 (ENSSPAG00000007472)	adra2c (ENSSPAG00000007453)	lrpap1 (ENSSPAG00000007439)	DOK7 (ENSSPAG00000007420)	rgs12b (ENSSPAG00000007393)	ENSSPAG00000007379	htt (ENSSPAG00000007211)	grk4 (ENSSPAG00000007130)	ENSSPAG00000007103	ENSSPAG00000007047	get3 (ENSSPAG00000007030) #19	BEST2 (ENSSPAG00000006998) #20	JUNB (ENSSPAG00000006974) #22	prdx2 (ENSSPAG00000006942)	ENSSPAG00000006932
Atherinomorphae	ANCESTRAL SPECIES	23	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000178685	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A
Cyprinodontiformes	ANCESTRAL SPECIES	24	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000178685	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000154277.b.a	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b
Aplocheiloidei	ANCESTRAL SPECIES	31	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00940000175885	ENSGT00940000156057.s.a	ENSGT00940000156448.a.a
Turquoise killifish	MODERN SPECIES	1611	hmx4 (ENSNFUG00015005468)	hmx1 (ENSNFUG00015005473)	adra2c (ENSNFUG00015005474)	ENSNFUG00015005481	LRPAP1 (ENSNFUG00015005489)	DOK7 (ENSNFUG00015005514)	rgs12b (ENSNFUG00015005540)	ENSNFUG00015005589	ENSNFUG00015005590	rgs12b (ENSNFUG00015005594)	GRK4 (ENSNFUG00015006283)	TOM1 (ENSNFUG00015006345)	ENSNFUG00015006354	ASNA1 (ENSNFUG00015006361) #19	BEST2 (ENSNFUG00015006376) #20	JUNBA (ENSNFUG00015006487) #22	prdx2 (ENSNFUG00015006496)	ENSNFUG00015006514	ptger1a (ENSNFUG00015006524)	ilf3a (ENSNFUG00015006528)	acp5a (ENSNFUG00015006536)	SLC44A2 (ENSNFUG00015006564)	ENSNFUG00015006935	ENSNFUG00015006940	odad3 (ENSNFUG00015006949)	ENSNFUG00015006996	Nfu_g_1_015864 (ENSNFUG00015007025)	ENSNFUG00015007027	ENSNFUG00015007029	ENSNFUG00015007032	ENSNFUG00015007040
Mangrove rivulus	MODERN SPECIES	38	htra3a (ENSKMAG00000000431)	GPR78 (ENSKMAG00000000416)	CPZ (ENSKMAG00000000355)	hmx4 (ENSKMAG00000000344)	hmx1 (ENSKMAG00000000336)	adra2c (ENSKMAG00000000318)	lrpap1 (ENSKMAG00000000264)	DOK7 (ENSKMAG00000000254)	rgs12b (ENSKMAG00000000144)	htt (ENSKMAG00000021831)	grk4 (ENSKMAG00000021806)	ENSKMAG00000021796	ENSKMAG00000021793	get3 (ENSKMAG00000021786) #19	BEST2 (ENSKMAG00000021782) #20	JUNB (ENSKMAG00000021778) #22	prdx2 (ENSKMAG00000021770)	ENSKMAG00000021763	ptger1a (ENSKMAG00000021747)	ilf3a (ENSKMAG00000021736)	acp5a (ENSKMAG00000021726)	ENSKMAG00000021724	SLC44A2 (ENSKMAG00000021699)	odad3 (ENSKMAG00000021682)	ENSKMAG00000021668	nfil3-5 (ENSKMAG00000021664)	klf1 (ENSKMAG00000021660)	ENSKMAG00000021654	ENSKMAG00000021652	gga1 (ENSKMAG00000021645)	ENSKMAG00000021636
Cyprinodontoidei	ANCESTRAL SPECIES	15	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000178685	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000154277.b.a	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000178685	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00960000186758	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Poecilia	ANCESTRAL SPECIES	6	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
NAME_6	ANCESTRAL SPECIES	4	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000006009.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000155828 #23	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT01030000234857	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Amazon molly	MODERN SPECIES	263	GPR78 (ENSPFOG00000014694)	CPZ (ENSPFOG00000014620)	hmx4 (ENSPFOG00000014605)	hmx1 (ENSPFOG00000014595)	adra2c (ENSPFOG00000020690)	adra2c (ENSPFOG00000020689)	lrpap1 (ENSPFOG00000014507)	DOK7 (ENSPFOG00000014460)	rgs12b (ENSPFOG00000014314)	htt (ENSPFOG00000013458)	grk4 (ENSPFOG00000013064)	get3 (ENSPFOG00000013002) #19	ENSPFOG00000012927	ENSPFOG00000012924	BEST2 (ENSPFOG00000012845) #20	JUNB (ENSPFOG00000020688) #22	PRDX2 (ENSPFOG00000012814) #23	ENSPFOG00000012800	ptger1a (ENSPFOG00000012799)	ptger1a (ENSPFOG00000022309)	ptger1a (ENSPFOG00000012794)	ilf3a (ENSPFOG00000012719)	acp5a (ENSPFOG00000012682)	ENSPFOG00000012679	syce2 (ENSPFOG00000022749)	SLC44A2 (ENSPFOG00000012441)	ENSPFOG00000012346	ENSPFOG00000012192	nfil3-5 (ENSPFOG00000020687)	ENSPFOG00000012157	klf1 (ENSPFOG00000012141)
Sailfin molly	MODERN SPECIES	1491											grk4 (ENSPLAG00000002464)	ENSPLAG00000002506	ENSPLAG00000002527	get3 (ENSPLAG00000002548) #19	BEST2 (ENSPLAG00000002585) #20	JUNB (ENSPLAG00000002610) #22	PRDX2 (ENSPLAG00000002621) #23
Guppy	MODERN SPECIES	439	zgc:195282 (ENSPREG00000000537)	pi4k2b (ENSPREG00000000536)	htra3a (ENSPREG00000000535)	GPR78 (ENSPREG00000000534)	CPZ (ENSPREG00000000533)	hmx4 (ENSPREG00000000532)	hmx1 (ENSPREG00000000531)	adra2c (ENSPREG00000000530)	lrpap1 (ENSPREG00000000529)	rgs12b (ENSPREG00000000528)	htt (ENSPREG00000000526)	grk4 (ENSPREG00000000525)	ENSPREG00000000524	get3 (ENSPREG00000000523) #19	BEST2 (ENSPREG00000000522) #20	JUNB (ENSPREG00000000521) #22	PRDX2 (ENSPREG00000000520) #23	ENSPREG00000000519	ptger1a (ENSPREG00000000518)	ilf3a (ENSPREG00000000517)	acp5a (ENSPREG00000000516)	syce2 (ENSPREG00000000515)	ENSPREG00000000514	ENSPREG00000000513	nfil3-5 (ENSPREG00000000512)	ENSPREG00000000511	klf1 (ENSPREG00000000510)	ENSPREG00000000509	ENSPREG00000000508	gga1 (ENSPREG00000000507)	ddx17 (ENSPREG00000000506)
Platyfish	MODERN SPECIES	19	htra3a (ENSXMAG00000023511)	GPR78 (ENSXMAG00000005538)	CPZ (ENSXMAG00000005506)	hmx4 (ENSXMAG00000026741)	hmx1 (ENSXMAG00000022412)	adra2c (ENSXMAG00000028511)	lrpap1 (ENSXMAG00000005493)	rgs12b (ENSXMAG00000005474)	htt (ENSXMAG00000005378)	ENSXMAG00000024183	grk4 (ENSXMAG00000005315)	ENSXMAG00000005288	ENSXMAG00000025019	get3 (ENSXMAG00000005285) #19	BEST2 (ENSXMAG00000005274) #20	JUNB (ENSXMAG00000019582) #22	PRDX2 (ENSXMAG00000025025) #23	ENSXMAG00000005262	ptger1a (ENSXMAG00000005260)	ilf3a (ENSXMAG00000005230)	acp5a (ENSXMAG00000005225)	SLC44A2 (ENSXMAG00000005153)	ENSXMAG00000028537	ENSXMAG00000005146	ENSXMAG00000005130	nfil3-5 (ENSXMAG00000005127)	ENSXMAG00000029592	klf1 (ENSXMAG00000005126)	ENSXMAG00000005125	ENSXMAG00000005121	gga1 (ENSXMAG00000005095)
NAME_4	ANCESTRAL SPECIES	28	ENSGT00390000010434.a	ENSGT00940000159570.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000166067.b	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00390000010231
Sheepshead minnow	MODERN SPECIES	748													get3 (ENSCVAG00000011473) #19	BEST2 (ENSCVAG00000011414) #20	prdx2 (ENSCVAG00000011345)	JUNB (ENSCVAG00000011333) #22	ENSCVAG00000011311	ptger1a (ENSCVAG00000011306)	ilf3a (ENSCVAG00000011300)	acp5a (ENSCVAG00000011279)	ENSCVAG00000011271	syce2 (ENSCVAG00000011263)	ENSCVAG00000011257 #29	SLC44A2 (ENSCVAG00000011236)	ENSCVAG00000011179	ENSCVAG00000011158	nfil3-5 (ENSCVAG00000011038)	klf1 (ENSCVAG00000011035)	si:dkey-43k4.3 (ENSCVAG00000011032)	ENSCVAG00000011017	gga1 (ENSCVAG00000000297)
Mummichog	MODERN SPECIES	2273	pi4k2b (ENSFHEG00000014259)	htra3a (ENSFHEG00000014287)	GPR78 (ENSFHEG00000014303)	CPZ (ENSFHEG00000014361)	hmx4 (ENSFHEG00000014380)	hmx1 (ENSFHEG00000014387)	adra2c (ENSFHEG00000014403)	lrpap1 (ENSFHEG00000014427)	rgs12b (ENSFHEG00000014467)	rgs12b (ENSFHEG00000014624)	htt (ENSFHEG00000014829)	grk4 (ENSFHEG00000000363)	ENSFHEG00000014902	get3 (ENSFHEG00000014913) #19	BEST2 (ENSFHEG00000000368) #20	JUNB (ENSFHEG00000014975) #22	prdx2 (ENSFHEG00000015024)	ENSFHEG00000015036	ptger1a (ENSFHEG00000015043)	ENSFHEG00000015091	acp5a (ENSFHEG00000015100)	syce2 (ENSFHEG00000015113)	gcdha (ENSFHEG00000015180) #29	SLC44A2 (ENSFHEG00000015306)	ENSFHEG00000015468	nfil3-5 (ENSFHEG00000015475)	ENSFHEG00000015477	klf1 (ENSFHEG00000015482)	ENSFHEG00000015499	ENSFHEG00000015581	gga1 (ENSFHEG00000015631)
Oryzias	ANCESTRAL SPECIES	36	ENSGT00390000010434.a	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000178685	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00960000186758	ENSGT00940000158178.b.b	ENSGT00940000168682	ENSGT00390000016735	ENSGT00940000154687.A	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00890000139482.b	ENSGT00940000166522	ENSGT00390000004692.d.a.m.b	ENSGT00390000003049.b.a	ENSGT00940000156344.a
Oryzias_b	ANCESTRAL SPECIES	25	ENSGT00390000010434.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00940000178685	ENSGT00940000160151	ENSGT01030000234857	ENSGT00940000156865.a	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000153430.b	ENSGT00940000159979.a.b	ENSGT00940000155764.A.b.b	ENSGT00940000164566.a	ENSGT00950000182886.a.a.b.s	ENSGT00390000018759	ENSGT00940000156344.a	ENSGT00390000003049.b.a	ENSGT00390000004692.d.a.m.b	ENSGT00940000166522	ENSGT00890000139482.b	ENSGT00940000164623.A	ENSGT00940000165438.a.b	ENSGT00940000154687.A	ENSGT00390000016735
Indian medaka	MODERN SPECIES	8	ENSOMEG00000016461	PLXNA1 (ENSOMEG00000016800)	chchd6b (ENSOMEG00000016956)	tpra1 (ENSOMEG00000016987)	ENSOMEG00000017002	ENSOMEG00000017047	ENSOMEG00000017072	TGIF2 (ENSOMEG00000017083)	ENSOMEG00000017099	DLGAP4 (ENSOMEG00000017195)	hmx4 (ENSOMEG00000017226)	hmx1 (ENSOMEG00000017240)	adra2c (ENSOMEG00000017256)	ENSOMEG00000017277	ENSOMEG00000017295	JUNB (ENSOMEG00000017314) #22	ENSOMEG00000017401	ENSOMEG00000000435	ENSOMEG00000017504	ENSOMEG00000017525	quo (ENSOMEG00000017614)	tgm2b (ENSOMEG00000017672)	ENSOMEG00000017692	ENSOMEG00000017706	krt4 (ENSOMEG00000017746)	ENSOMEG00000017808	krt18b (ENSOMEG00000017836)	eif4bb (ENSOMEG00000000454)	ENSOMEG00000018061	vdrb (ENSOMEG00000018135)	ENSOMEG00000018241
Oryzias_a	ANCESTRAL SPECIES	43	ENSGT00950000183001.b.b.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b	ENSGT00940000161707.a.a	ENSGT00390000004855	ENSGT00390000015386.a	ENSGT00940000164407.a.a	ENSGT00390000015863	ENSGT00960000190697	ENSGT00940000178685	ENSGT00940000160151	ENSGT00940000156865.a	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000158178.b.b	ENSGT00960000186758	ENSGT00940000168682	ENSGT00390000016735	ENSGT00940000154687.A	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00890000139482.b	ENSGT00940000166522	ENSGT00390000004692.d.a.m.b	ENSGT00390000003049.b.a	ENSGT00940000156344.a
Japanese Medaka HdrR	MODERN SPECIES		adra2c (ENSORLG00000014425)	lrpap1 (ENSORLG00000014444)	DOK7 (ENSORLG00000030591)	rgs12b (ENSORLG00000014506)	ENSORLG00000030482	ENSORLG00000027024	ENSORLG00000023554	ENSORLG00000026623	ENSORLG00000029455	ENSORLG00000025094	grk4 (ENSORLG00000014627)	ENSORLG00000028029	ENSORLG00000014601	ASNA1 (ENSORLG00000014556) #19	BEST2 (ENSORLG00000024132) #20	JUNB (ENSORLG00000014533) #22	prdx2 (ENSORLG00000014528)	ENSORLG00000014523	ptger1a (ENSORLG00000014518)	SLC44A2 (ENSORLG00000028411)	ENSORLG00000027559	ENSORLG00000028713	ENSORLG00000030137	acp5a (ENSORLG00000014660)	ilf3a (ENSORLG00000014690)	ENSORLG00000014724	nfil3-5 (ENSORLG00000014730)	ENSORLG00000028226	ENSORLG00000014742	ENSORLG00000014775	ASF1B (ENSORLG00000022809)
Pinecone sodierfish	MODERN SPECIES		htra3a (ENSMMDG00005000295)	GPR78 (ENSMMDG00005000247)	CPZ (ENSMMDG00005000134)	hmx4 (ENSMMDG00005000095)	hmx1 (ENSMMDG00005000090)	adra2c (ENSMMDG00005000087)	lrpap1 (ENSMMDG00005000083)	DOK7 (ENSMMDG00005000080)	rgs12b (ENSMMDG00005021958)	htt (ENSMMDG00005021556)	grk4 (ENSMMDG00005020756)	ENSMMDG00005020732	ENSMMDG00005020730	get3 (ENSMMDG00005020727) #19	ENSMMDG00005020725 #20	JUNB (ENSMMDG00005020724) #22	prdx2 (ENSMMDG00005020721)	ENSMMDG00005020713	ptger1a (ENSMMDG00005020706)	ilf3a (ENSMMDG00005020703)	acp5a (ENSMMDG00005020697)	gcdha (ENSMMDG00005020662) #29	ENSMMDG00005020656	SLC44A2 (ENSMMDG00005020652)	odad3 (ENSMMDG00005020644)	ENSMMDG00005020638	nfil3-5 (ENSMMDG00005020633)	ENSMMDG00005020630	klf1 (ENSMMDG00005020628)	ENSMMDG00005020623	ENSMMDG00005020616
Cod	MODERN SPECIES	16	ENSGMOG00000002708	chrnb3a (ENSGMOG00000000376)	ENSGMOG00000012672	ENSGMOG00000012668	ENSGMOG00000012666	htra3a (ENSGMOG00000012664)	ENSGMOG00000030977	ENSGMOG00000012661	lrpap1 (ENSGMOG00000015843)	ENSGMOG00000015814	htt (ENSGMOG00000012719)	ENSGMOG00000012714	ENSGMOG00000005785	GET3 (ENSGMOG00000005795) #19	ENSGMOG00000005811 #20	JUNB (ENSGMOG00000005824) #22	ENSGMOG00000005833	ENSGMOG00000028391	ENSGMOG00000031435	ENSGMOG00000035835	ilf3a (ENSGMOG00000008922)	acp5a (ENSGMOG00000008932)	ENSGMOG00000033829	ENSGMOG00000002215	ENSGMOG00000033449	odad3 (ENSGMOG00000008243)	ENSGMOG00000025372	nfil3-5 (ENSGMOG00000035045)	klf1 (ENSGMOG00000029103)	ENSGMOG00000036773	ENSGMOG00000005436
Protacanthopterygii	ANCESTRAL SPECIES	59														ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.b.a	ENSGT00940000159979.a.b	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A	ENSGT00390000016735	ENSGT00940000168682	ENSGT00940000158116.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b	ENSGT00990000204498	ENSGT00990000204330
Salmoninae	ANCESTRAL SPECIES	14										ENSGT00940000156057.s.a.p	ENSGT00940000156448.a.a.d	ENSGT00940000160049.a	ENSGT00390000016730.q.b	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b #22	ENSGT00940000154277.b.b.a	ENSGT00940000159979.a.b.e	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A.d	ENSGT00390000016735.gb.a.a	ENSGT00940000162148.t	ENSGT00940000154687.A.c	ENSGT00390000016735.fb	ENSGT00940000168682.j	ENSGT00940000158116.a.a.a #29	ENSGT00940000158178.b.b	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A.c.b	ENSGT00940000164108.a.b
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	340																ENSGT00940000161195.a.b.c #22	ENSGT00940000154277.b.b.a.a	ENSGT00940000159979.a.b.e.b
Salmo	ANCESTRAL SPECIES	79													ENSGT00390000016730.q.a	ENSGT00390000003817.h.b #19	ENSGT00940000161361.g #20	ENSGT00940000161195.a.b.c #22	ENSGT00940000154277.b.b.a.a	ENSGT00940000159979.a.b.e.a.b	ENSGT01030000234559.a.a.b.a.a.a.e	ENSGT00940000154687.A.c	ENSGT00390000016735.fb.a	ENSGT00940000168682.j.c	ENSGT00940000158116.a.a.b #29	ENSGT00940000158178.b.b.g	ENSGT00940000153116.C.b.e	ENSGT00940000165438.a.b.f	ENSGT00940000164623.A.c.b	ENSGT00940000164108.a.b.f	ENSGT00940000163957.e.b.c	ENSGT00990000204498.a	ENSGT00990000204330.h
Atlantic salmon	MODERN SPECIES	11	atf7ip (ENSSSAG00000004856)	ENSSSAG00000082222	septin3 (ENSSSAG00000006070)	serhl (ENSSSAG00000107316)	ENSSSAG00000118999	ENSSSAG00000006143	ENSSSAG00000005989	ENSSSAG00000005977	ENSSSAG00000095854	ENSSSAG00000121972	ENSSSAG00000007411	ENSSSAG00000006354	ENSSSAG00000008300	GET3 (ENSSSAG00000094261) #19	ENSSSAG00000008345 #20	junb (ENSSSAG00000097267) #22	prdx1 (ENSSSAG00000009173)	ENSSSAG00000009041	ptger1a (ENSSSAG00000007227)	ilf3a (ENSSSAG00000009245)	acp5a (ENSSSAG00000007384)	ENSSSAG00000102652	gcdha (ENSSSAG00000007013) #29	ENSSSAG00000047269	odad3 (ENSSSAG00000000241)	ENSSSAG00000008877	nfil3-5 (ENSSSAG00000099524)	ENSSSAG00000121623	klf1 (ENSSSAG00000105668)	ENSSSAG00000000347	ENSSSAG00000083002
River trout	MODERN SPECIES	31	serhl (ENSSTUG00000040129)	mb (ENSSTUG00000040123)	ENSSTUG00000040100	zgc:158803 (ENSSTUG00000040089)	ENSSTUG00000040081	ENSSTUG00000040075	KCNJ4 (ENSSTUG00000040061)	SOX10 (ENSSTUG00000040034)	si:dkey-43k4.3 (ENSSTUG00000040009)	MICALL1 (ENSSTUG00000039901)	gga1 (ENSSTUG00000039341)	ENSSTUG00000038820	ENSSTUG00000038753	get3 (ENSSTUG00000038730) #19	BEST2 (ENSSTUG00000038705) #20	JUNB (ENSSTUG00000047393) #22	prdx2 (ENSSTUG00000047386)	ENSSTUG00000047373	ptger1a (ENSSTUG00000047368)	ilf3a (ENSSTUG00000047356)	acp5a (ENSSTUG00000047352)	ENSSTUG00000047348	gcdha (ENSSTUG00000047324) #29	ENSSTUG00000047313	SLC44A2 (ENSSTUG00000045432)	odad3 (ENSSTUG00000045301)	ENSSTUG00000045274	nfil3-5 (ENSSTUG00000045273)	ENSSTUG00000045270	klf1 (ENSSTUG00000045267)	ENSSTUG00000045265
Oncorhynchus	ANCESTRAL SPECIES	196												ENSGT00940000160049.a.a	ENSGT00390000016730.r	ENSGT00390000003817.h.b.b #19	ENSGT00940000161361.j #20	ENSGT00940000161195.a.b.c #22	ENSGT00940000154277.b.b.a.a	ENSGT00940000159979.a.b.e.b
Oncorhynchus_a	ANCESTRAL SPECIES	51	ENSGT00940000160809.k	ENSGT00390000017504.k.a.a	ENSGT00950000183213.a.a.a.d	ENSGT00390000017489.b.k.b	ENSGT00940000157340.k.a.d.a	ENSGT01030000234586.A.b.a.e	ENSGT00940000158046.a.b.a.a.a	ENSGT00940000158046.a.b.a.b	ENSGT00390000010231.c	ENSGT00940000156057.s.a.p.d.a	ENSGT00940000156448.a.a.d	ENSGT00940000160049.a.a	ENSGT00390000016730.r	ENSGT00390000003817.h.b.b #19	ENSGT00940000161361.j #20	ENSGT00940000161195.a.b.c #22	ENSGT00940000154277.b.b.a.a	ENSGT00940000159979.a.b.e.b
Chinook salmon	MODERN SPECIES	892																JUNB (ENSOTSG00005015471) #22	prdx2 (ENSOTSG00005015470)	ENSOTSG00005015469
Coho salmon	MODERN SPECIES		serhl (ENSOKIG00005004846)	mb (ENSOKIG00005004850)	ENSOKIG00005004860	zgc:158803 (ENSOKIG00005004888)	ENSOKIG00005004980	ENSOKIG00005004987	KCNJ4 (ENSOKIG00005004991)	SOX10 (ENSOKIG00005004993)	ENSOKIG00005005000	MICALL1 (ENSOKIG00005005013)	gga1 (ENSOKIG00005005072)	ddx17 (ENSOKIG00005005486)	ENSOKIG00005007993	get3 (ENSOKIG00005008089) #19	BEST2 (ENSOKIG00005008107) #20	JUNB (ENSOKIG00005008153) #22	prdx2 (ENSOKIG00005008164)	ENSOKIG00005008216	ENSOKIG00005008261	ENSOKIG00005008270	ENSOKIG00005008295	ptger1a (ENSOKIG00005008306)	ENSOKIG00005008316	ptger1a (ENSOKIG00005008328)	acp5a (ENSOKIG00005008337)	ENSOKIG00005008354	gcdha (ENSOKIG00005008398) #29	SLC44A2 (ENSOKIG00005009049)	ENSOKIG00005009656	odad3 (ENSOKIG00005009672)	ENSOKIG00005009733
Rainbow trout	MODERN SPECIES	8	mb (ENSOMYG00000011303)	ENSOMYG00000011282	zgc:158803 (ENSOMYG00000011244)	ENSOMYG00000011226	ENSOMYG00000011221	ENSOMYG00000007119	ENSOMYG00000007176	ENSOMYG00000007338	ENSOMYG00000008430	ENSOMYG00000010366	ntan1 (ENSOMYG00000011069)	GET3 (ENSOMYG00000011098) #19	ENSOMYG00000057973	ENSOMYG00000011139 #20	ENSOMYG00000077305	JUNB (ENSOMYG00000011179) #22	ENSOMYG00000011157	ENSOMYG00000011190	ptger1a (ENSOMYG00000054043)	ilf3a (ENSOMYG00000074925)	acp5a (ENSOMYG00000013273)	ENSOMYG00000058666	gcdha (ENSOMYG00000049177) #29	ENSOMYG00000056025	ENSOMYG00000012038	ENSOMYG00000076194	odad3 (ENSOMYG00000013377)	ENSOMYG00000069499	nfil3-5 (ENSOMYG00000057462)	ENSOMYG00000070441	klf1 (ENSOMYG00000063546)
Salmoninae_a	ANCESTRAL SPECIES	33	ENSGT00530000063960.f	ENSGT00940000160809	ENSGT00390000017504.k.a	ENSGT00950000183213.a.a.a	ENSGT00390000017489.b	ENSGT00940000157340.k.a	ENSGT01030000234586.A.b.a	ENSGT00940000158046.a.b.a.a	ENSGT00390000010231	ENSGT00940000156057.s.a.p	ENSGT00940000156448.a.a.d	ENSGT00940000160049.a	ENSGT00390000016730.r	ENSGT00390000003817.h.b #19	ENSGT00940000161361 #20	ENSGT00940000161195.a.b.d #22	ENSGT00940000154277.b.b.a.b	ENSGT00940000159979.a.b.e.a	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A.d	ENSGT00390000016735.gb.a.a	ENSGT00940000162148.t	ENSGT00940000154687.A.c	ENSGT00390000016735.fb	ENSGT00940000168682.j	ENSGT00940000158116.a.a.a #29	ENSGT00940000158178.b.b	ENSGT01000000216566	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A.c.b
Salmo	ANCESTRAL SPECIES	75	ENSGT00940000157340.k.a.a	ENSGT01030000234586.A.b.a.c	ENSGT00940000158046.a.b.b.b	ENSGT00390000010231.a	ENSGT00940000156057.s.a.p	ENSGT00940000158046.a.b.b.a	ENSGT00390000010231.b	ENSGT00940000156057.s.a.o.a.a	ENSGT00940000156448.a.a.c	ENSGT00940000160049.b	ENSGT00390000016730.q.b	ENSGT00940000154705.B.a.a	ENSGT00390000016730.r	ENSGT00390000003817.h.a #19	ENSGT00940000161361.h #20	ENSGT00940000161195.a.b.d #22	ENSGT00940000154277.b.b.a.b	ENSGT00940000159979.a.b.e.a.a	ENSGT01030000234559.a.a.b.a.a.a.f	ENSGT00940000154687.A.d	ENSGT00390000016735.fb.b	ENSGT00940000168682.j.d	ENSGT00940000158116.a.a.a #29	ENSGT00940000158178.b.b.h	ENSGT01000000216566	ENSGT00940000153116.C.b.f	ENSGT00940000165438.a.b.e	ENSGT00940000164623.A.c.a	ENSGT00940000164623.A.d	ENSGT00940000164108.a.b.e	ENSGT00940000163957.e.b.d
Atlantic salmon	MODERN SPECIES	3	septin3 (ENSSSAG00000007203)	serhl (ENSSSAG00000006190)	ENSSSAG00000098294	ENSSSAG00000006130	ENSSSAG00000006119	ENSSSAG00000006223	SOX10 (ENSSSAG00000097602)	cssa12h22orf23 (ENSSSAG00000006283)	ENSSSAG00000084974	ENSSSAG00000083081	ENSSSAG00000007431	ENSSSAG00000117336	ENSSSAG00000006888	GET3 (ENSSSAG00000108477) #19	ENSSSAG00000006768 #20	JUNB (ENSSSAG00000006975) #22	PRDX1 (ENSSSAG00000006941)	ENSSSAG00000006980	ptger1a (ENSSSAG00000003939)	ilf3a (ENSSSAG00000005921)	ppa5 (ENSSSAG00000084718)	ENSSSAG00000101918	gcdha (ENSSSAG00000093126) #29	ENSSSAG00000007613	odad3 (ENSSSAG00000008204)	ENSSSAG00000008248	nfil3-5 (ENSSSAG00000100910)	ENSSSAG00000086485	ENSSSAG00000089431	ENSSSAG00000116916	ENSSSAG00000000319
River trout	MODERN SPECIES	5	ENSSTUG00000047712	serhl (ENSSTUG00000047714)	mb (ENSSTUG00000047716)	pane1 (ENSSTUG00000030374)	zgc:158803 (ENSSTUG00000030388)	ENSSTUG00000030402	KCNJ4 (ENSSTUG00000030406)	SOX10 (ENSSTUG00000030409)	si:dkey-43k4.3 (ENSSTUG00000030419)	MICALL1 (ENSSTUG00000030425)	gga1 (ENSSTUG00000030442)	ddx17 (ENSSTUG00000030738)	ENSSTUG00000033654	get3 (ENSSTUG00000033692) #19	BEST2 (ENSSTUG00000033744) #20	JUNB (ENSSTUG00000033765) #22	prdx2 (ENSSTUG00000033776)	ENSSTUG00000033836	ptger1a (ENSSTUG00000033886)	ilf3a (ENSSTUG00000033893)	acp5a (ENSSTUG00000033927)	ENSSTUG00000033946	gcdha (ENSSTUG00000033985) #29	SLC44A2 (ENSSTUG00000034356)	ENSSTUG00000037762	odad3 (ENSSTUG00000037794)	ENSSTUG00000037983	nfil3-5 (ENSSTUG00000038032)	ENSSTUG00000038034	ENSSTUG00000038038	klf1 (ENSSTUG00000038051)
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00390000017504.k.a.a	ENSGT00950000183213.a.a.a.d	ENSGT00390000017489.b.k.b	ENSGT00940000157340.k.a.d	ENSGT01030000234586.A.b.a.e	ENSGT00940000158046.a.b.a.a.a	ENSGT00940000156057.s.a.p.d.b	ENSGT00940000158046.a.b.a.b	ENSGT00390000010231	ENSGT00940000156057.s.a.p.c	ENSGT00940000156448.a.a.c	ENSGT00940000160049.a.b	ENSGT00390000016730.q.b	ENSGT00390000003817.h.b.a #19	ENSGT00940000161361.i #20	ENSGT00940000161195.a.b.d #22	ENSGT00940000154277.b.b.a.b	ENSGT00940000159979.a.b.e.a	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A.d	ENSGT00390000016735.gb.a.a	ENSGT00940000168682.j	ENSGT00940000158116.a.a.a #29	ENSGT00940000158178.b.b.i	ENSGT01000000216566	ENSGT00940000158178.b.b.j	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A.c.b	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000077161	ENSOMYG00000017502	zgc:158803 (ENSOMYG00000017487)	ENSOMYG00000017476	ENSOMYG00000017470	ENSOMYG00000016404	ENSOMYG00000016411	ENSOMYG00000016427	ENSOMYG00000075056	ENSOMYG00000016446	ENSOMYG00000016479	ENSOMYG00000017268	ENSOMYG00000017313	GET3 (ENSOMYG00000017327) #19	ENSOMYG00000017333 #20	JUNB (ENSOMYG00000017399) #22	ENSOMYG00000017411	ENSOMYG00000017442	ptger1a (ENSOMYG00000013344)	ilf3a (ENSOMYG00000013317)	acp5a (ENSOMYG00000016384)	ENSOMYG00000013230	gcdha (ENSOMYG00000013024) #29	ENSOMYG00000016206	ENSOMYG00000013718	odad3 (ENSOMYG00000011834)	ENSOMYG00000068927	nfil3-5 (ENSOMYG00000011785)	ENSOMYG00000062433	klf1 (ENSOMYG00000069651)	ENSOMYG00000011763
Oncorhynchus_a	ANCESTRAL SPECIES	38	ENSGT00530000063960.f.a	ENSGT00940000160809.l	ENSGT00390000017504.k.a.b	ENSGT00950000183213.a.a.a.c	ENSGT00390000017489.b.k.a	ENSGT00940000157340.k.a.c	ENSGT01030000234586.A.b.a.f	ENSGT00940000158046.a.b.a.a.b	ENSGT00390000010231.d	ENSGT00940000156057.s.a.p.c	ENSGT00940000156448.a.a.c	ENSGT00940000160049.a.b	ENSGT00390000016730.q.b	ENSGT00390000003817.h.b.a #19	ENSGT00940000161361.i #20	ENSGT00940000161195.a.b.d #22	ENSGT00940000154277.b.b.a.b	ENSGT00940000159979.a.b.e.a	ENSGT00940000159979.a.b.f	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00940000154687.A.d	ENSGT00390000016735.gb.a.a	ENSGT00940000168682.j	ENSGT00940000158116.a.a.a #29	ENSGT00940000158178.b.b.i	ENSGT01000000216566	ENSGT00940000153116.C.b	ENSGT00940000165438.a.b	ENSGT00940000164623.A.c.b	ENSGT00940000164108.a.b	ENSGT00940000163957.e.b
Coho salmon	MODERN SPECIES	12	fdx2 (ENSOKIG00005021030)	ENSOKIG00005021022	fdx2 (ENSOKIG00005021008)	PDGFA (ENSOKIG00005020981)	ENSOKIG00005020826	yju2b (ENSOKIG00005020810)	ENSOKIG00005020804	PSPN (ENSOKIG00005020798)	wdr83 (ENSOKIG00005020770) #14	wdr83os (ENSOKIG00005020745)	GGA1 (ENSOKIG00005020336)	DDX17 (ENSOKIG00005018358)	ENSOKIG00005018272	GET3 (ENSOKIG00005018253) #19	BEST2 (ENSOKIG00005018213) #20	JUNB (ENSOKIG00005018202) #22	ENSOKIG00005018180	ENSOKIG00005018158	si:dkey-43k4.3 (ENSOKIG00005018146)	SOX10 (ENSOKIG00005018131)	KCNJ4 (ENSOKIG00005018125)	ENSOKIG00005018115	ENSOKIG00005018106	zgc:158803 (ENSOKIG00005018052)	ENSOKIG00005018029	mb (ENSOKIG00005017999)	ENSOKIG00005017990	atf7ip (ENSOKIG00005017974)	grin2bb (ENSOKIG00005037615)	si:ch211-243a20.3 (ENSOKIG00005037600)	f8a (ENSOKIG00005037536)
Chinook salmon	MODERN SPECIES	25	ENSOTSG00005044992	ENSOTSG00005044993	ENSOTSG00005045011	ap1m2 (ENSOTSG00005046503)	CDKN2D (ENSOTSG00005036322)	ENSOTSG00005036339	keap1b (ENSOTSG00005036359)	KCNJ4 (ENSOTSG00005036361)	SOX10 (ENSOTSG00005036362)	si:dkey-43k4.3 (ENSOTSG00005036363)	ENSOTSG00005036364	gga1 (ENSOTSG00005036367)	ENSOTSG00005037691	get3 (ENSOTSG00005037717) #19	BEST2 (ENSOTSG00005037719) #20	JUNB (ENSOTSG00005037721) #22	prdx2 (ENSOTSG00005037722)	ENSOTSG00005037725	ptger1a (ENSOTSG00005037726)	ilf3a (ENSOTSG00005037729)	acp5a (ENSOTSG00005037730)	ENSOTSG00005037731	ENSOTSG00005037732	ENSOTSG00005037733	zgc:158803 (ENSOTSG00005037734)	ENSOTSG00005037735	ENSOTSG00005037736	serhl (ENSOTSG00005037760)	ENSOTSG00005037761	atf7ip (ENSOTSG00005037762)	ENSOTSG00005037763
Huchen	DUPLICATION
Huchen	MODERN SPECIES	1537																JUNB (ENSHHUG00000031386) #22	prdx2 (ENSHHUG00000031391)	ENSHHUG00000031487	ptger1a (ENSHHUG00000031488)	ENSHHUG00000031489	ENSHHUG00000031496	acp5a (ENSHHUG00000031503)	ENSHHUG00000031537 #29	ENSHHUG00000031539	gcdha (ENSHHUG00000031552) #29	SLC44A2 (ENSHHUG00000031567)	odad3 (ENSHHUG00000031746)	ENSHHUG00000031760	ENSHHUG00000031764	nfil3-5 (ENSHHUG00000031771)	ENSHHUG00000031774
Huchen	MODERN SPECIES	517		pane1 (ENSHHUG00000025211)	zgc:158803 (ENSHHUG00000025175)	ENSHHUG00000025173	ENSHHUG00000025156	KCNJ4 (ENSHHUG00000025148)	SOX10 (ENSHHUG00000025143)	si:dkey-43k4.3 (ENSHHUG00000025128)	ENSHHUG00000025125	ENSHHUG00000025068	gga1 (ENSHHUG00000024982)	ddx17 (ENSHHUG00000024870)	ENSHHUG00000024774	get3 (ENSHHUG00000024763) #19	BEST2 (ENSHHUG00000024747) #20	JUNB (ENSHHUG00000024745) #22	prdx2 (ENSHHUG00000024700)	ENSHHUG00000024697	ptger1a (ENSHHUG00000024695)	ilf3a (ENSHHUG00000024690)	acp5a (ENSHHUG00000024683)	ENSHHUG00000024673	gcdha (ENSHHUG00000024317) #29	SLC44A2 (ENSHHUG00000023886)	odad3 (ENSHHUG00000023859)	ENSHHUG00000023840	nfil3-5 (ENSHHUG00000023834)	ENSHHUG00000023831	klf1 (ENSHHUG00000023826)	ENSHHUG00000023823	ENSHHUG00000023817
Northern pike	MODERN SPECIES	8	mb (ENSELUG00000003039)	cenpm (ENSELUG00000002959)	zgc:158803 (ENSELUG00000002946)	smdt1b (ENSELUG00000002938)	ENSELUG00000002910	KCNJ4 (ENSELUG00000002877)	SOX10 (ENSELUG00000002872)	si:dkey-43k4.3 (ENSELUG00000002861)	ENSELUG00000031165	MICALL1 (ENSELUG00000001627)	gga1 (ENSELUG00000002835)	ENSELUG00000024602	NTAN1 (ENSELUG00000024528)	get3 (ENSELUG00000024519) #19	BEST2 (ENSELUG00000024468) #20	JUNB (ENSELUG00000001033) #22	prdx2 (ENSELUG00000024424)	ENSELUG00000024368	ptger1a (ENSELUG00000024325)	ilf3a (ENSELUG00000024309)	ENSELUG00000001019	SLC44A2 (ENSELUG00000024173)	odad3 (ENSELUG00000024076)	ENSELUG00000024001	nfil3-5 (ENSELUG00000023904)	ENSELUG00000023901	klf1 (ENSELUG00000023894)	ENSELUG00000023878	ENSELUG00000023825	PLPPR2 (ENSELUG00000023801)	elof1 (ENSELUG00000001403)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000161195.b #22
Osteoglossocephalai	ANCESTRAL SPECIES	128	ENSGT00940000157552.s.b	ENSGT00940000160315	ENSGT00940000167287	ENSGT00940000160257	ENSGT00940000164506.b.b	ENSGT00950000182917.a.b.b	ENSGT00390000013719 #33	ENSGT00950000182916.a.b.a.a.a.b.a.b ##35	ENSGT00940000177692	ENSGT00390000012078.a.b #32	ENSGT00940000163721	ENSGT00390000012267 #18	ENSGT00390000003817 #19	ENSGT00940000161361 #20	ENSGT00940000160152 #21	ENSGT00940000161195.b #22	ENSGT00940000159089	ENSGT00940000159801.B	ENSGT00390000005605	ENSGT00390000005584	ENSGT01050000244887.A.a.a.a	ENSGT00940000157140.b.b.a
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000161195.b #22
Otomorpha	ANCESTRAL SPECIES	19	ENSGT00940000155858.e	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.v	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611	ENSGT00950000183036.b.f	ENSGT00390000000976	ENSGT00940000158718.a.b	ENSGT00940000160152 #21	ENSGT00940000161195.b #22	ENSGT00940000159979.a.a	ENSGT01030000234559.a.a.b.a.a.b	ENSGT00940000156719	ENSGT00390000006387 #30	ENSGT00940000166067.a	ENSGT00940000168682	ENSGT00940000158116.a.b #29	ENSGT00970000193546	ENSGT00940000158178.b.a	ENSGT00940000165438.a.a	ENSGT00940000164623.B	ENSGT00940000164108.a.a.f.a	ENSGT01060000251158	ENSGT00940000158145.b	ENSGT01010000222313.A.b.a.c
Otophysi	ANCESTRAL SPECIES	253						ENSGT00390000004368	ENSGT00940000157552.s.a	ENSGT00940000164506.b.a.a.a	ENSGT00940000164506.b.a.a.b	ENSGT00940000161361 #20	ENSGT00390000003817 #19	ENSGT00940000163721	ENSGT00390000012078.a.b #32	ENSGT00950000182916.a.b.a.a.a.b.a.a ##35	ENSGT00530000063926.b #34	ENSGT00940000161195.b #22	ENSGT00940000154277.b.b.a	ENSGT00390000010768 #24	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00390000010591	ENSGT00390000012248	ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b.e.a	ENSGT00390000009597.d	ENSGT00940000156327.l	ENSGT00940000156841.a.b	ENSGT00940000154556.c.a	ENSGT00530000063000.a.a.b.j	ENSGT00940000157700.c #26
Characiphysae	ANCESTRAL SPECIES	32	ENSGT00940000159160	ENSGT00550000075118	ENSGT00390000009001	ENSGT00940000156552.c.b	ENSGT00390000004368	ENSGT00940000157552.s.a	ENSGT00940000164506.b.a.a.a	ENSGT00940000164506.b.a.a.b	ENSGT00940000161361 #20	ENSGT00390000003817 #19	ENSGT00940000163721	ENSGT00390000012078.a.b #32	ENSGT00950000182916.a.b.a.a.a.b.a.a ##35	ENSGT00940000163149.b.c.b.b.a.a.b	ENSGT00530000063926.b #34	ENSGT00940000161195.b #22	ENSGT00940000154277.b.b.a	ENSGT00940000153430.b	ENSGT00390000010768 #24	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00390000010591	ENSGT00390000012248	ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b.e.a	ENSGT00390000009597.d	ENSGT00940000156327.l	ENSGT00940000156841.a.b	ENSGT00940000154556.c.a	ENSGT00530000063000.a.a.b.j	ENSGT00940000157700.c #26
Channel catfish	MODERN SPECIES	18	KLF5 (ENSIPUG00000024245)	pibf1 (ENSIPUG00000024246)	gpalpp1 (ENSIPUG00000024248)	gtf2f2a (ENSIPUG00000024249)	tpt1 (ENSIPUG00000024253)	zgc:172122 (ENSIPUG00000024257)	ENSIPUG00000024259	ENSIPUG00000024263	ENSIPUG00000024265	BEST2 (ENSIPUG00000024266) #20	asna1 (ENSIPUG00000024268) #19	rnf11a (ENSIPUG00000024270)	NFIX (ENSIPUG00000024283) ##35	ENSIPUG00000024286	dand5 (ENSIPUG00000024287) #34	junb (ENSIPUG00000024288) #22	PRDX1 (ENSIPUG00000024290)	ENSIPUG00000024292	ENSIPUG00000024296	ctsh (ENSIPUG00000024294)	ENSIPUG00000024298	rnaseh2a (ENSIPUG00000024299) #24	snrpb2 (ENSIPUG00000024300)	prokr1a (ENSIPUG00000024305)	aplf (ENSIPUG00000024306)	fbxo48 (ENSIPUG00000024307)	Cnrip1 (ENSIPUG00000024308)	Ppp3r1 (ENSIPUG00000024309)	etaa1 (ENSIPUG00000024335)	MEIS1 (ENSIPUG00000024342)	SPRED2 (ENSIPUG00000024350)
Characiphysae_b	ANCESTRAL SPECIES	49	ENSGT00730000111163	ENSGT00940000159160	ENSGT00550000075118	ENSGT00390000009001	ENSGT00940000156552.c.b	ENSGT00390000004368	ENSGT00940000157552.s.a	ENSGT00940000164506.b.a.a.a	ENSGT00940000161361 #20	ENSGT00390000003817 #19	ENSGT00940000163721	ENSGT00390000012078.a.b #32	ENSGT00950000182916.a.b.a.a.a.b.a.a ##35	ENSGT00940000163149.b.c.b.b.a.a.b	ENSGT00530000063926.b #34	ENSGT00940000161195.b #22	ENSGT00940000154277.b.b.a	ENSGT00390000010768 #24	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00390000010591	ENSGT00390000012248	ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b.e.a	ENSGT00390000009597.d	ENSGT00390000009597.c	ENSGT00940000156327.l	ENSGT00940000156841.a.b	ENSGT00940000154556.c.a	ENSGT00530000063000.a.a.b.j	ENSGT00940000157700.c #26
Characoidei	ANCESTRAL SPECIES	259									ENSGT01100000263475.f.b.h	ENSGT00940000173852	ENSGT00940000163721	ENSGT00390000012078.a.b #32	ENSGT00950000182916.a.b.a.a.a.b.a.a ##35	ENSGT00940000163149.b.c.b.b.a.a.b	ENSGT00530000063926.b #34	ENSGT00940000161195.b #22	ENSGT00940000154277.b.b.a	ENSGT00390000010768 #24	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00390000010591	ENSGT00390000012248	ENSGT00940000161361 #20	ENSGT00390000003817 #19
Red-bellied piranha	MODERN SPECIES	391									ENSPNAG00000021268	ENSPNAG00000021258	rnf11a (ENSPNAG00000021240)	rad23aa (ENSPNAG00000021223) #32	NFIX (ENSPNAG00000021168) ##35	ENSPNAG00000021109	dand5 (ENSPNAG00000021090) #34	junba (ENSPNAG00000021060) #22	prdx2 (ENSPNAG00000021025)	rnaseh2a (ENSPNAG00000021017) #24	snrpb2 (ENSPNAG00000020984)	prokr1a (ENSPNAG00000020941)	ENSPNAG00000020934	fbxo48 (ENSPNAG00000020921)	ENSPNAG00000020913	BEST2 (ENSPNAG00000020903) #20	ENSPNAG00000020873	get3 (ENSPNAG00000020848) #19	ENSPNAG00000020815	ENSPNAG00000020707	ENSPNAG00000020581	ENSPNAG00000020553	ENSPNAG00000020515
Mexicana tetra	MODERN SPECIES	3	cnrip1a (ENSAMXG00000039764)	ENSAMXG00000034099	ENSAMXG00000037034	ENSAMXG00000033547	ENSAMXG00000003502	ENSAMXG00000003518	ENSAMXG00000003509	ENSAMXG00000003539	ENSAMXG00000036035	ENSAMXG00000031403	ENSAMXG00000003529	rnf11a (ENSAMXG00000018505)	rad23aa (ENSAMXG00000003562) #32	ENSAMXG00000003579 ##35	dand5 (ENSAMXG00000030931) #34	junba (ENSAMXG00000025030) #22	ENSAMXG00000018995	rnaseh2a (ENSAMXG00000000436) #24	snrpb2 (ENSAMXG00000037263)	prokr1a (ENSAMXG00000000449)	fbxo48 (ENSAMXG00000031002)	BEST2 (ENSAMXG00000029576) #20	get3 (ENSAMXG00000000478) #19	ENSAMXG00000035498	ENSAMXG00000000481	lbx1b (ENSAMXG00000000484)	cenpk (ENSAMXG00000042770)	RIMS1 (ENSAMXG00000000491)	ENSAMXG00000000507	eef1a1b (ENSAMXG00000020651)	ENSAMXG00000034633
Electric eel	MODERN SPECIES	218	atp6v1f (ENSEEEG00000009402)	lamtor4 (ENSEEEG00000009405)	ARF5 (ENSEEEG00000009408)	gcc1 (ENSEEEG00000009511)	dennd6b (ENSEEEG00000009517)	ppp6r2a (ENSEEEG00000009557)	fam3c (ENSEEEG00000009755)	ENSEEEG00000009757	CEP83 (ENSEEEG00000009760)	lrrc17 (ENSEEEG00000009769)	fgl2a (ENSEEEG00000009770)	ENSEEEG00000009771	ENSEEEG00000009773	ENSEEEG00000009774	ENSEEEG00000009779	junba (ENSEEEG00000009780) #22
Cyprinoidei	ANCESTRAL SPECIES	30	ENSGT00390000001189.b.j	ENSGT00390000002596.b.a	ENSGT00950000182942.a.a	ENSGT00390000017281	ENSGT01000000214715	ENSGT01060000250057	ENSGT00940000165237.b.b	ENSGT00940000157552.s.a	ENSGT00940000164506.b.a.a.b	ENSGT00940000161361 #20	ENSGT00390000003817 #19	ENSGT00940000163721	ENSGT00390000012078.a.b #32	ENSGT00950000182916.a.b.a.a.a.b.a.a ##35	ENSGT00530000063926.b #34	ENSGT00940000161195.b #22	ENSGT00940000154277.b.b.a	ENSGT00390000010768 #24	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00390000010591	ENSGT00390000012248	ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b.e.a	ENSGT00390000009597.d	ENSGT00940000156327.l	ENSGT00940000156841.a.b	ENSGT00940000154556.c.a	ENSGT00530000063000.a.a.b.j	ENSGT00940000157700.c #26	ENSGT00940000162838.g.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	38								ENSGT00940000165237.b.b.b	ENSGT00940000157552.s.a.g	ENSGT00940000161361.c #20	ENSGT00390000003817.m #19	ENSGT00940000163721.d.b	ENSGT00390000012078.a.b.a #32	ENSGT00950000182916.a.b.a.a.a.b.a.a.e.a.b ##35	ENSGT00530000063926.b.b #34	ENSGT00940000161195.b.a #22	ENSGT00940000154277.b.b.a.f	ENSGT00390000010768.b #24	ENSGT00390000007046.a.h	ENSGT00940000170452.a	ENSGT00390000010591.j	ENSGT00390000012248.o	ENSGT00390000004284.f.d	ENSGT00940000156530.c.`b.b.e.a.a.a.b.a	ENSGT00390000009597.d	ENSGT00940000156327.l.j.b	ENSGT00940000156841.a.b.h.a.a	ENSGT00940000154556.c.a.b	ENSGT00530000063000.a.a.b.j.a	ENSGT00940000157700.c.t #26	ENSGT00940000162838.g.a.b
Goldfish	MODERN SPECIES	914								ENSCARG00000053563	rab3da (ENSCARG00000053532)	get3 (ENSCARG00000053488) #19	rnf11a (ENSCARG00000053462)	rad23aa (ENSCARG00000053451) #32	NFIX (ENSCARG00000053081) ##35	ENSCARG00000053047	dand5 (ENSCARG00000046326) #34	junba (ENSCARG00000046304) #22
Cyprininae_a	ANCESTRAL SPECIES	66								ENSGT01060000250057.a	ENSGT00940000165237.b.b.b	ENSGT00940000157552.s.a.g	ENSGT00940000161361.c #20	ENSGT00390000003817.m #19	ENSGT00940000163721.d.a	ENSGT00390000012078.a.b.a #32	ENSGT00950000182916.a.b.a.a.a.b.a.a.e.a.b ##35	ENSGT00940000161195.b.a #22	ENSGT00940000154277.b.b.a.f	ENSGT00390000010768.b #24	ENSGT00390000007046.a.h	ENSGT00940000170452.a	ENSGT00390000010591.j	ENSGT00390000012248.o	ENSGT00390000004284.f.d	ENSGT00940000156530.c.`b.b.e.a.a.a.b.a	ENSGT00390000009597.d.b	ENSGT00940000156327.l.j.b.a	ENSGT00940000156841.a.b.g	ENSGT00940000154556.c.a.a.b	ENSGT00940000156327.l.j.a.a	ENSGT00940000156841.a.b.h.a.a	ENSGT00940000154556.c.a.b
Common carp reference	MODERN SPECIES	22	abca1a (ENSCCRG00000021525)	tacr3l (ENSCCRG00000018652)	ENSCCRG00000050755	cldnd1b (ENSCCRG00000066473)	ccdc86 (ENSCCRG00000071868)	glb1 (ENSCCRG00000018962)	ENSCCRG00000018630	ENSCCRG00000069520	ENSCCRG00000000754	rab3da (ENSCCRG00000024640)	ENSCCRG00000059098 #20	get3 (ENSCCRG00000027319) #19	rnf11a (ENSCCRG00000046170)	rad23aa (ENSCCRG00000027343) #32	ENSCCRG00000049624 ##35	junba (ENSCCRG00000070741) #22	prdx2 (ENSCCRG00000081562)	snrpb2 (ENSCCRG00000007265)	prokr1a (ENSCCRG00000007264)	ENSCCRG00000000428	ppp3r1b (ENSCCRG00000061499)	etaa1a (ENSCCRG00000073575)	meis1a (ENSCCRG00000000380)	ENSCCRG00000073155	actr2a (ENSCCRG00000082302)	atg4da (ENSCCRG00000053920)	ENSCCRG00000061116 #26	ENSCCRG00000064320	ndufaf5 (ENSCCRG00000053140)	esf1 (ENSCCRG00000020205)	btbd3a (ENSCCRG00000057036)
Golden-line barbel	MODERN SPECIES	50								ENSSGRG00000015771	rab3da (ENSSGRG00000015770)	ENSSGRG00000015769 #20	ENSSGRG00000015767 #20	get3 (ENSSGRG00000015760) #19	rnf11a (ENSSGRG00000015759)	rad23aa (ENSSGRG00000015758) #32	NFIX (ENSSGRG00000015756) ##35	junba (ENSSGRG00000015754) #22	prdx2 (ENSSGRG00000015663)	rnaseh2a (ENSSGRG00000015662) #24	snrpb2 (ENSSGRG00000015650)	prokr1a (ENSSGRG00000015648)	fbxo48 (ENSSGRG00000015644)	cnrip1a (ENSSGRG00000015643)	ppp3r1b (ENSSGRG00000015625)	etaa1a (ENSSGRG00000015624)	meis1a (ENSSGRG00000015623)	SPRED2 (ENSSGRG00000015617)	actr2a (ENSSGRG00000015543)	atg4da (ENSSGRG00000015527)	MAST1 (ENSSGRG00000015521) #26	KIF16B (ENSSGRG00000015518)	ndufaf5 (ENSSGRG00000015458)
Cyprininae	ANCESTRAL SPECIES	546					ENSGT00940000165237.b.b.a	ENSGT00940000159680.r	ENSGT00390000004368	ENSGT00940000157552.s.a.h	ENSGT00940000164506.b.a.a.b	ENSGT00940000161361.d #20	ENSGT00390000003817.n #19	ENSGT00940000163721.d.a	ENSGT00390000012078.a.b.b #32	ENSGT00950000182916.a.b.a.a.a.b.a.a.e.a.a ##35	ENSGT00530000063926.b.a #34	ENSGT00940000161195.b.b #22	ENSGT00940000154277.b.b.a.e	ENSGT00390000010768.a #24	ENSGT00390000007046.a.g	ENSGT00940000170452.b	ENSGT00390000010591.i	ENSGT00390000012248.p	ENSGT00390000004284.f.c	ENSGT00940000156530.c.`b.b.e.a.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	18				ENSCARG00000023403	cnn1a (ENSCARG00000023410)	pld6 (ENSCARG00000023417)	ENSCARG00000023433	ENSCARG00000023466	ENSCARG00000023481	BEST2 (ENSCARG00000023490) #20	get3 (ENSCARG00000023496) #19	rnf11a (ENSCARG00000023499)	rad23aa (ENSCARG00000023507) #32	NFIX (ENSCARG00000023545) ##35	dand5 (ENSCARG00000023632) #34	junba (ENSCARG00000023638) #22	prdx2 (ENSCARG00000023646)	rnaseh2a (ENSCARG00000023660) #24	snrpb2 (ENSCARG00000023693)	prokr1a (ENSCARG00000023707)	APLF (ENSCARG00000023715)	fbxo48 (ENSCARG00000023742)	cnrip1a (ENSCARG00000023747)	ppp3r1b (ENSCARG00000023762)	etaa1a (ENSCARG00000023863)	meis1a (ENSCARG00000023885)	SPRED2 (ENSCARG00000023931)	actr2a (ENSCARG00000023942)	atg4da (ENSCARG00000024045)	MAST1 (ENSCARG00000024092) #26	KIF16B (ENSCARG00000024504)
Goldfish	MODERN SPECIES	18	ENSCARG00000016611	ENSCARG00000016622	ENSCARG00000016629	ENSCARG00000016639	cnn1a (ENSCARG00000016643)	pld6 (ENSCARG00000016655)	rab3da (ENSCARG00000016667)	ENSCARG00000016674	ENSCARG00000016684	BEST2 (ENSCARG00000016691) #20	get3 (ENSCARG00000016701) #19	rnf11a (ENSCARG00000016712)	rad23aa (ENSCARG00000016715) #32	NFIX (ENSCARG00000016755) ##35	dand5 (ENSCARG00000016828) #34	junba (ENSCARG00000016833) #22	prdx2 (ENSCARG00000016839)	rnaseh2a (ENSCARG00000016861) #24	snrpb2 (ENSCARG00000016906)	prokr1a (ENSCARG00000016916)	ENSCARG00000016923	fbxo48 (ENSCARG00000016937)	cnrip1a (ENSCARG00000016943)	ppp3r1b (ENSCARG00000016973)	etaa1a (ENSCARG00000017051)	meis1a (ENSCARG00000017082)	SPRED2 (ENSCARG00000003861)	actr2a (ENSCARG00000003899)	atg4da (ENSCARG00000004028)	MAST1 (ENSCARG00000004083) #26	KIF16B (ENSCARG00000004399)
Cyprininae_a	ANCESTRAL SPECIES	64	ENSGT01000000214715.a.a.a	ENSGT01000000214715.b.a	ENSGT01060000250057.b	ENSGT00940000165237.b.b.a	ENSGT00940000159680.r	ENSGT00390000004368	ENSGT00940000157552.s.a.h	ENSGT00940000164506.b.a.a.b	ENSGT00940000161361.d #20	ENSGT00390000003817.n #19	ENSGT00940000163721.d.b	ENSGT00390000012078.a.b.b #32	ENSGT00950000182916.a.b.a.a.a.b.a.a.e.b ##35	ENSGT00950000182916.a.b.a.a.a.b.a.a.e.a.a ##35	ENSGT00530000063926.b.a #34	ENSGT00940000161195.b.b #22	ENSGT00940000154277.b.b.a.e	ENSGT00390000010768.a #24	ENSGT00390000007046.a.g	ENSGT00940000170452.b	ENSGT00390000010591.i	ENSGT00390000012248.p	ENSGT00390000004284.f.c	ENSGT00940000156530.c.`b.b.e.a.a.b	ENSGT00390000009597.d.a	ENSGT00940000156327.l.j.b.b	ENSGT00940000156841.a.b.h.b	ENSGT00940000154556.c.a.a.a	ENSGT00530000063000.a.a.b.j.b	ENSGT00940000157700.c.s #26	ENSGT00940000162838.g.a.a
Common carp reference	MODERN SPECIES	27	ENSCCRG00000050778	ENSCCRG00000050779	ENSCCRG00000066169	ENSCCRG00000078248	ENSCCRG00000059022	ENSCCRG00000076987	cnn1a (ENSCCRG00000013135)	pld6 (ENSCCRG00000013139)	ENSCCRG00000079815	ENSCCRG00000024647 #20	get3 (ENSCCRG00000077731) #19	rnf11a (ENSCCRG00000070076)	rad23aa (ENSCCRG00000058608) #32	ENSCCRG00000066847 ##35	dand5 (ENSCCRG00000000059) #34	junba (ENSCCRG00000000065) #22	prdx2 (ENSCCRG00000064594)	rnaseh2a (ENSCCRG00000000063) #24	prokr1a (ENSCCRG00000000061)	APLF (ENSCCRG00000000068)	fbxo48 (ENSCCRG00000061231)	cnrip1a (ENSCCRG00000000742)	ppp3r1b (ENSCCRG00000018396)	etaa1a (ENSCCRG00000000686)	ENSCCRG00000052788	meis1a (ENSCCRG00000000669)	actr2a (ENSCCRG00000000090)	atg4da (ENSCCRG00000070945)	ENSCCRG00000033365 #26	ENSCCRG00000082256	ndufaf5 (ENSCCRG00000041111)
Golden-line barbel	MODERN SPECIES	182															ENSSGRG00000048476	junba (ENSSGRG00000048477) #22	prdx2 (ENSSGRG00000048489)	rnaseh2a (ENSSGRG00000048633) #24	snrpb2 (ENSSGRG00000048639)	prokr1a (ENSSGRG00000048641)	ENSSGRG00000048642	fbxo48 (ENSSGRG00000048645)	fbxo48 (ENSSGRG00000048646)	cnrip1a (ENSSGRG00000000093)	ppp3r1b (ENSSGRG00000000114)	etaa1a (ENSSGRG00000000156)	ENSSGRG00000000160	meis1a (ENSSGRG00000000171)	SPRED2 (ENSSGRG00000000188)	ACTR2 (ENSSGRG00000000200)	atg4da (ENSSGRG00000000210)
Zebrafish	MODERN SPECIES		ENSDARG00000088234	zgc:194101 (ENSDARG00000076828)	ENSDARG00000093494	ENSDARG00000095434	ENSDARG00000059948	cnn1a (ENSDARG00000017193)	pld6 (ENSDARG00000059951)	rab3da (ENSDARG00000018107)	BEST2 (ENSDARG00000079163) #20	get3 (ENSDARG00000018190) #19	rnf11a (ENSDARG00000010442)	ENSDARG00000113791	rad23aa (ENSDARG00000020001) #32	NFIX (ENSDARG00000043226) ##35	dand5 (ENSDARG00000036471) #34	junba (ENSDARG00000074378) #22	prdx2 (ENSDARG00000025350)	rnaseh2a (ENSDARG00000018891) #24	snrpb2 (ENSDARG00000039424)	prokr1a (ENSDARG00000074182)	ENSDARG00000096566	fbxo48 (ENSDARG00000086184)	cnrip1a (ENSDARG00000091683)	ppp3r1b (ENSDARG00000069360)	etaa1a (ENSDARG00000074915)	meis1a (ENSDARG00000002937)	SPRED2 (ENSDARG00000052435)	actr2a (ENSDARG00000052438)	atg4da (ENSDARG00000043548)	MAST1 (ENSDARG00000027497) #26	KIF16B (ENSDARG00000100225)
Clupeiformes	ANCESTRAL SPECIES	17	ENSGT00940000168611	ENSGT01100000263705	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000177829	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00940000155858.e	ENSGT00390000012267 #18	ENSGT00940000160152 #21	ENSGT00940000161195.b #22	ENSGT00940000161195.a.a #22	ENSGT00950000183144.B #25	ENSGT00940000157700.d #26	ENSGT00530000063000.a.a.b.i	ENSGT00940000156887.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605	ENSGT00940000154915	ENSGT00390000018266	ENSGT00940000159290	ENSGT00940000160393	ENSGT00390000018570.a.a.b	ENSGT00940000164377	ENSGT00390000004010.a.b.a.a.e	ENSGT00940000175471
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	13	polr3f (ENSDCDG00000002046)	ENSDCDG00000002057	ENSDCDG00000002064	ENSDCDG00000002068	ENSDCDG00000002071	ENSDCDG00000002074	ENSDCDG00000002077	dzank1 (ENSDCDG00000002084)	kat14 (ENSDCDG00000002098)	rrbp1b (ENSDCDG00000002144)	AARS2 (ENSDCDG00000002186)	ENSDCDG00000002193	ENSDCDG00000002206	rnf11a (ENSDCDG00000002240)	get3 (ENSDCDG00000002243) #19	junba (ENSDCDG00000002252) #22	ENSDCDG00000002258	ENSDCDG00000002271	ENSDCDG00000002272	ENSDCDG00000002274	ENSDCDG00000002276	ENSDCDG00000002280	prdx2 (ENSDCDG00000002286)	ENSDCDG00000002296	rnaseh2a (ENSDCDG00000002301) #24	ENSDCDG00000002305 #26	atg4da (ENSDCDG00000002325)	trappc5 (ENSDCDG00000002328)	mcoln1a (ENSDCDG00000002329)	rgs11 (ENSDCDG00000002352)	ints15 (ENSDCDG00000002479)
Denticle herring	MODERN SPECIES	17	ENSDCDG00000004711	ENSDCDG00000004717	ENSDCDG00000004707	ENSDCDG00000004705	ENSDCDG00000004704	pick1 (ENSDCDG00000004685)	plbd1a (ENSDCDG00000004593)	ENSDCDG00000004589	ENSDCDG00000004587	GUCY2C (ENSDCDG00000004520)	MYH9 (ENSDCDG00000004285)	slc25a38a (ENSDCDG00000004260)	ubn2b (ENSDCDG00000004254)	trir (ENSDCDG00000004249) #18	hook2 (ENSDCDG00000004051) #21	junba (ENSDCDG00000004036) #22	rtbdn (ENSDCDG00000004034) #25	MAST1 (ENSDCDG00000003154) #26	ATG4D (ENSDCDG00000002884)	ENSDCDG00000024261	smarca4a (ENSDCDG00000024187)	ldlra (ENSDCDG00000023175)	kri1 (ENSDCDG00000023148)	ENSDCDG00000023145	SDR42E2 (ENSDCDG00000023140)	CDR2 (ENSDCDG00000023138)	mfsd13al (ENSDCDG00000023137)	kdelr2a (ENSDCDG00000023136)	ENSDCDG00000023135	spag9a (ENSDCDG00000022986)	tob1b (ENSDCDG00000022972)
Reedfish	MODERN SPECIES	8	foxd7 (ENSECRG00000018952)	ENSECRG00000018941	prkcsh (ENSECRG00000018911)	elavl3 (ENSECRG00000018117)	DOCK6 (ENSECRG00000017288)	kank2 (ENSECRG00000017107)	ENSECRG00000017081	ENSECRG00000017071 #33	ENSECRG00000017009	rad23aa (ENSECRG00000016975) #32	rnf11a (ENSECRG00000016960)	trir (ENSECRG00000016949) #18	get3 (ENSECRG00000016877) #19	BEST2 (ENSECRG00000016838) #20	hook2 (ENSECRG00000016806) #21	junba (ENSECRG00000016788) #22	PRDX2 (ENSECRG00000016770) #23	rnaseh2a (ENSECRG00000016753) #24	rtbdn (ENSECRG00000016742) #25	MAST1 (ENSECRG00000022588) #26	atg4da (ENSECRG00000022566)	ENSECRG00000022550	kri1 (ENSECRG00000022529)	CDKN2D (ENSECRG00000022521)	ap1m2 (ENSECRG00000022504)	smarca4a (ENSECRG00000022404)	LDLR (ENSECRG00000022353)	nfixb (ENSECRG00000022267) ##35	tspan35 (ENSECRG00000022210)	ENSECRG00000022202	epor (ENSECRG00000022187)