Gnathostomata	ANCESTRAL SPECIES	572														ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515 #25
Euteleostomi	ANCESTRAL SPECIES	234	ENSGT00700000104550.a	ENSGT00940000158764	ENSGT00940000155581.A	ENSGT00950000182863.A.a.b	ENSGT00950000183176.a	ENSGT00940000159472	ENSGT00390000001562	ENSGT00390000000546	ENSGT00940000154663	ENSGT00940000157601	ENSGT00390000001804	ENSGT00940000154258.a	ENSGT00950000182981.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22
Sarcopterygii	ANCESTRAL SPECIES	230														ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515 #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00740000116961	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589
Tetrapoda	ANCESTRAL SPECIES	19	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515 #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Amniota	ANCESTRAL SPECIES	19	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000164164	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Mammalia	ANCESTRAL SPECIES	15	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Theria	ANCESTRAL SPECIES	19	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Eutheria	ANCESTRAL SPECIES	11	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00390000018145.wc.a.a	ENSGT00940000161589
Cetacea	ANCESTRAL SPECIES	3	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853.l #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000168632 #36	ENSGT00940000154543.a #37
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853.l #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000168632 #36	ENSGT00940000154543.a #37
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853.l #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000168632 #36	ENSGT00940000154543.a #37
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853.l #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000168632 #36	ENSGT00940000154543.a #37
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853.l #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000168632 #36	ENSGT00940000154543.a #37
Narwhal	MODERN SPECIES	299	ARFGAP1 (ENSMMNG00015002472) #7	NKAIN4 (ENSMMNG00015002566) #8	BIRC7 (ENSMMNG00015002630) #9	YTHDF1 (ENSMMNG00015002665) #10	BHLHE23 (ENSMMNG00015002701) #11	SLC17A9 (ENSMMNG00015002717) #12	GID8 (ENSMMNG00015002735) #13	DIDO1 (ENSMMNG00015002766) #14	TCFL5 (ENSMMNG00015002807) #15	ENSMMNG00015002855 #16	OGFR (ENSMMNG00015002906) #17	MRGBP (ENSMMNG00015002936) #18	NTSR1 (ENSMMNG00015002962) #19	SLCO4A1 (ENSMMNG00015002992) #20	ENSMMNG00015003015 #21	GATA5 (ENSMMNG00015003060) #22	RBBP8NL (ENSMMNG00015003088) #23	CABLES2 (ENSMMNG00015003141) #24	RPS21 (ENSMMNG00015003199) #25	ENSMMNG00015003249 #26	ADRM1 (ENSMMNG00015003347) #27	OSBPL2 (ENSMMNG00015003407) #28	HRH3 (ENSMMNG00015003462) #29	MTG2 (ENSMMNG00015003488) #30	SS18L1 (ENSMMNG00015003519) #31	PSMA7 (ENSMMNG00015003566) #32	LSM14B (ENSMMNG00015003641) #33	TAF4 (ENSMMNG00015003692) #34	CDH4 (ENSMMNG00015003737) #35	ENSMMNG00015003795 #36	FAM217B (ENSMMNG00015003840) #37
Beluga whale	MODERN SPECIES	36	ENSDLEG00000006501	NKAIN4 (ENSDLEG00000006505) #8	BIRC7 (ENSDLEG00000006511) #9	YTHDF1 (ENSDLEG00000006539) #10	BHLHE23 (ENSDLEG00000006552) #11	SLC17A9 (ENSDLEG00000006561) #12	GID8 (ENSDLEG00000006569) #13	DIDO1 (ENSDLEG00000006572) #14	TCFL5 (ENSDLEG00000006581) #15	ENSDLEG00000006589 #16	OGFR (ENSDLEG00000006610) #17	MRGBP (ENSDLEG00000006615) #18	NTSR1 (ENSDLEG00000006619) #19	SLCO4A1 (ENSDLEG00000006657) #20	ENSDLEG00000006849 #21	GATA5 (ENSDLEG00000006862) #22	RBBP8NL (ENSDLEG00000006866) #23	CABLES2 (ENSDLEG00000006872) #24	RPS21 (ENSDLEG00000006898) ##25	LAMA5 (ENSDLEG00000006920) #26	ADRM1 (ENSDLEG00000007029) #27	OSBPL2 (ENSDLEG00000007046) #28	HRH3 (ENSDLEG00000007062) #29	MTG2 (ENSDLEG00000007066) #30	SS18L1 (ENSDLEG00000007157) #31	PSMA7 (ENSDLEG00000007179) #32	LSM14B (ENSDLEG00000007209) #33	TAF4 (ENSDLEG00000000226) #34	CDH4 (ENSDLEG00000000382) #35	FAM217B (ENSDLEG00000000421) #37	PPP1R3D (ENSDLEG00000000434)
Vaquita	MODERN SPECIES	6	ARFGAP1 (ENSPSNG00000020779) #7	NKAIN4 (ENSPSNG00000020851) #8	BIRC7 (ENSPSNG00000020957) #9	YTHDF1 (ENSPSNG00000021004) #10	BHLHE23 (ENSPSNG00000021049) #11	SLC17A9 (ENSPSNG00000021073) #12	GID8 (ENSPSNG00000021145) #13	DIDO1 (ENSPSNG00000021175) #14	TCFL5 (ENSPSNG00000021221) #15	COL9A3 (ENSPSNG00000021251)	OGFR (ENSPSNG00000021362) #17	MRGBP (ENSPSNG00000021374) #18	NTSR1 (ENSPSNG00000021395) #19	SLCO4A1 (ENSPSNG00000021425) #20	ENSPSNG00000021451 #21	GATA5 (ENSPSNG00000021484) #22	RBBP8NL (ENSPSNG00000021519) #23	CABLES2 (ENSPSNG00000021622) #24	ENSPSNG00000009820 #25	ADRM1 (ENSPSNG00000013077) #27	OSBPL2 (ENSPSNG00000013262) #28	HRH3 (ENSPSNG00000013409) #29	MTG2 (ENSPSNG00000013478) #30	SS18L1 (ENSPSNG00000013560) #31	PSMA7 (ENSPSNG00000013641) #32	LSM14B (ENSPSNG00000013767) #33	TAF4 (ENSPSNG00000013933) #34	CDH4 (ENSPSNG00000014451) #35	ENSPSNG00000014879 #36	FAM217B (ENSPSNG00000014948) #37	PPP1R3D (ENSPSNG00000014976)
Dolphin	MODERN SPECIES	1008																GATA5 (ENSTTRG00000011109) #22	RBBP8NL (ENSTTRG00000011108) #23	CABLES2 (ENSTTRG00000011107) #24	ENSTTRG00000011105 ##25	LAMA5 (ENSTTRG00000011095) #26	ADRM1 (ENSTTRG00000011089) #27	OSBPL2 (ENSTTRG00000011082) #28	ENSTTRG00000011077	HRH3 (ENSTTRG00000011074) #29	MTG2 (ENSTTRG00000011070) #30	SS18L1 (ENSTTRG00000011062) #31	PSMA7 (ENSTTRG00000011050) #32	LSM14B (ENSTTRG00000011043) #33
Sperm whale	MODERN SPECIES	5	NKAIN4 (ENSPCTG00005009376) #8	BIRC7 (ENSPCTG00005009624) #9	YTHDF1 (ENSPCTG00005009694) #10	ENSPCTG00005009752 #11	ENSPCTG00005009792 #11	SLC17A9 (ENSPCTG00005009878) #12	GID8 (ENSPCTG00005010283) #13	ENSPCTG00005010335 #14	ENSPCTG00005010449 #15	COL9A3 (ENSPCTG00005010512)	OGFR (ENSPCTG00005010786) #17	MRGBP (ENSPCTG00005010826) #18	NTSR1 (ENSPCTG00005010880) #19	SLCO4A1 (ENSPCTG00005010945) #20	ENSPCTG00005011020 #21	GATA5 (ENSPCTG00005011063) #22	RBBP8NL (ENSPCTG00005011159) #23	CABLES2 (ENSPCTG00005011308) #24	ENSPCTG00005011426 #25	ADRM1 (ENSPCTG00005014185) #27	OSBPL2 (ENSPCTG00005014366) #28	HRH3 (ENSPCTG00005014655) #29	MTG2 (ENSPCTG00005014701) #30	SS18L1 (ENSPCTG00005014758) #31	PSMA7 (ENSPCTG00005014933) #32	LSM14B (ENSPCTG00005015013) #33	TAF4 (ENSPCTG00005015206) #34	CDH4 (ENSPCTG00005015443) #35	ENSPCTG00005015819 #36	FAM217B (ENSPCTG00005015882) #37	PPP1R3D (ENSPCTG00005015919)
Blue whale	MODERN SPECIES	6	NKAIN4 (ENSBMSG00010011008) #8	BIRC7 (ENSBMSG00010011034) #9	YTHDF1 (ENSBMSG00010011055) #10	BHLHE23 (ENSBMSG00010011080) #11	SLC17A9 (ENSBMSG00010011094) #12	GID8 (ENSBMSG00010011118) #13	ENSBMSG00010011147 #14	ENSBMSG00010011180	TCFL5 (ENSBMSG00010011196) #15	ENSBMSG00010011229 #16	OGFR (ENSBMSG00010011267) #17	MRGBP (ENSBMSG00010011280) #18	NTSR1 (ENSBMSG00010011293) #19	SLCO4A1 (ENSBMSG00010011305) #20	ENSBMSG00010011317 #21	GATA5 (ENSBMSG00010011332) #22	RBBP8NL (ENSBMSG00010011353) #23	ENSBMSG00010011386 #24	RPS21 (ENSBMSG00010011407) #25	ADRM1 (ENSBMSG00010011687) #27	OSBPL2 (ENSBMSG00010011717) #28	HRH3 (ENSBMSG00010011747) #29	MTG2 (ENSBMSG00010011756) #30	SS18L1 (ENSBMSG00010011768) #31	PSMA7 (ENSBMSG00010011783) #32	LSM14B (ENSBMSG00010011814) #33	TAF4 (ENSBMSG00010011906) #34	CDH4 (ENSBMSG00010011951) #35	ENSBMSG00010011984 #36	FAM217B (ENSBMSG00010011998) #37	PPP1R3D (ENSBMSG00010012002)
Pecora	ANCESTRAL SPECIES	9	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00390000018145.wc.a.a	ENSGT00940000161589
Yarkand deer	MODERN SPECIES	15	COL20A1 (ENSCHYG00000023249)	ARFGAP1 (ENSCHYG00000023418) #7	BIRC7 (ENSCHYG00000024242) #9	YTHDF1 (ENSCHYG00000024279) #10	BHLHE23 (ENSCHYG00000024339) #11	SLC17A9 (ENSCHYG00000024379) #12	GID8 (ENSCHYG00000024609) #13	DIDO1 (ENSCHYG00000024645) #14	TCFL5 (ENSCHYG00000024725) #15	ENSCHYG00000024763 #16	OGFR (ENSCHYG00000024794) #17	MRGBP (ENSCHYG00000024816) #18	NTSR1 (ENSCHYG00000024836) #19	SLCO4A1 (ENSCHYG00000024856) #20	ENSCHYG00000024915 #21	GATA5 (ENSCHYG00000024947) #22	RBBP8NL (ENSCHYG00000025000) #23	ENSCHYG00000025117 #24	ENSCHYG00000025132 #25	ADRM1 (ENSCHYG00000025424) #27	OSBPL2 (ENSCHYG00000025489) #28	HRH3 (ENSCHYG00000025598) #29	MTG2 (ENSCHYG00000025616) #30	SS18L1 (ENSCHYG00000025661) #31	PSMA7 (ENSCHYG00000025756) #32	LSM14B (ENSCHYG00000025784) #33	TAF4 (ENSCHYG00000025826) #34	CDH4 (ENSCHYG00000025855) #35	ENSCHYG00000013703	CDH26 (ENSCHYG00000013755)	ENSCHYG00000014153 #37
Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Bovidae	ANCESTRAL SPECIES	10	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Caprinae	ANCESTRAL SPECIES	37	ENSGT00940000159329	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00990000203619.B	ENSGT00940000158925	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183202.b	ENSGT00950000183115.b.a	ENSGT00390000012063.a
Rambouillet Sheep	MODERN SPECIES	4	ENSOARG00020003728	EEF1A2 (ENSOARG00020003758)	KCNQ2 (ENSOARG00020003802)	CHRNA4 (ENSOARG00020004285)	ARFGAP1 (ENSOARG00020004787) #7	BIRC7 (ENSOARG00020005025) #9	YTHDF1 (ENSOARG00020005076) #10	BHLHE23 (ENSOARG00020005128) #11	SLC17A9 (ENSOARG00020005151) #12	GID8 (ENSOARG00020005239) #13	TCFL5 (ENSOARG00020005326) #15	COL9A3 (ENSOARG00020005388)	OGFR (ENSOARG00020005520) #17	MRGBP (ENSOARG00020005556) #18	NTSR1 (ENSOARG00020005581) #19	GATA5 (ENSOARG00020005701) #22	RBBP8NL (ENSOARG00020005734) #23	CABLES2 (ENSOARG00020005784) #24	RPS21 (ENSOARG00020005843) #25	LAMA5 (ENSOARG00020005901) #26	ADRM1 (ENSOARG00020006278) #27	OSBPL2 (ENSOARG00020006432) #28	HRH3 (ENSOARG00020006602) #29	MTG2 (ENSOARG00020006674) #30	SS18L1 (ENSOARG00020006781) #31	PSMA7 (ENSOARG00020007065) #32	ENSOARG00020007136 #33	TAF4 (ENSOARG00020007283) #34	CDH4 (ENSOARG00020007577) #35	CDH26 (ENSOARG00020007709)	FAM217B (ENSOARG00020007830) #37
Goat	MODERN SPECIES	4	CHRNA4 (ENSCHIG00000023125)	ENSCHIG00000013050	ARFGAP1 (ENSCHIG00000027204) #7	BIRC7 (ENSCHIG00000021634) #9	YTHDF1 (ENSCHIG00000026494) #10	BHLHE23 (ENSCHIG00000012514) #11	SLC17A9 (ENSCHIG00000021766) #12	GID8 (ENSCHIG00000023483) #13	DIDO1 (ENSCHIG00000010423) #14	TCFL5 (ENSCHIG00000019060) #15	ENSCHIG00000022644 #16	OGFR (ENSCHIG00000020689) #17	ENSCHIG00000014569 #18	NTSR1 (ENSCHIG00000026075) #19	SLCO4A1 (ENSCHIG00000020363) #20	GATA5 (ENSCHIG00000014469) #22	RBBP8NL (ENSCHIG00000025293) #23	CABLES2 (ENSCHIG00000016200) #24	RPS21 (ENSCHIG00000013467) #25	LAMA5 (ENSCHIG00000011048) #26	ADRM1 (ENSCHIG00000015510) #27	OSBPL2 (ENSCHIG00000021852) #28	HRH3 (ENSCHIG00000006885) #29	MTG2 (ENSCHIG00000022564) #30	SS18L1 (ENSCHIG00000024560) #31	PSMA7 (ENSCHIG00000014692) #32	ENSCHIG00000010284 #33	TAF4 (ENSCHIG00000012545) #34	CDH4 (ENSCHIG00000007626) #35	CDH26 (ENSCHIG00000027057)	FAM217B (ENSCHIG00000011525) #37
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00990000203619.B	ENSGT00940000158925	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183202.b	ENSGT00940000153244.B.z.c.b	ENSGT00950000183115.b.a
Bos	ANCESTRAL SPECIES	22	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00990000203619.B	ENSGT00940000158925	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183202.b	ENSGT00940000153244.B.z.c.b	ENSGT00950000183115.b.a
Bos_b	ANCESTRAL SPECIES	4	ENSGT00890000139515 #7	ENSGT00970000197151	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00990000203619.B	ENSGT00940000158925	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183202.b	ENSGT00940000153244.B.z.c.b	ENSGT00950000183115.b.a
Hybrid Bos Indicus	MODERN SPECIES	4	ARFGAP1 (ENSBIXG00005020213) #7	ENSBIXG00005006458	BIRC7 (ENSBIXG00005003370) #9	YTHDF1 (ENSBIXG00005003409) #10	BHLHE23 (ENSBIXG00005020315) #11	SLC17A9 (ENSBIXG00005005595) #12	GID8 (ENSBIXG00005003440) #13	DIDO1 (ENSBIXG00005020462) #14	TCFL5 (ENSBIXG00005003466) #15	COL9A3 (ENSBIXG00005020674)	OGFR (ENSBIXG00005006823) #17	MRGBP (ENSBIXG00005006040) #18	NTSR1 (ENSBIXG00005020774) #19	ENSBIXG00005020790 #21	SLCO4A1 (ENSBIXG00005020865) #20	GATA5 (ENSBIXG00005006262) #22	RBBP8NL (ENSBIXG00005020989) #23	CABLES2 (ENSBIXG00005006264) #24	RPS21 (ENSBIXG00005003553) #25	ADRM1 (ENSBIXG00005003573) #27	HRH3 (ENSBIXG00005007067) #29	MTG2 (ENSBIXG00005021227) #30	SS18L1 (ENSBIXG00005021240) #31	ENSBIXG00005021267 #32	LSM14B (ENSBIXG00005021304) #33	OSBPL2 (ENSBIXG00005021374) #28	TAF4 (ENSBIXG00005021394) #34	CDH4 (ENSBIXG00005021467) #35	CDH26 (ENSBIXG00005003632)	ENSBIXG00005021566 #37	PPP1R3D (ENSBIXG00005000015)
Cow	MODERN SPECIES	4	ARFGAP1 (ENSBTAG00000004916) #7	ENSBTAG00000051598	BIRC7 (ENSBTAG00000004911) #9	YTHDF1 (ENSBTAG00000010383) #10	BHLHE23 (ENSBTAG00000010873) #11	SLC17A9 (ENSBTAG00000001829) #12	GID8 (ENSBTAG00000001827) #13	DIDO1 (ENSBTAG00000006002) #14	TCFL5 (ENSBTAG00000046520) #15	COL9A3 (ENSBTAG00000015581) #16	OGFR (ENSBTAG00000031718) #17	MRGBP (ENSBTAG00000031716) #18	NTSR1 (ENSBTAG00000021727) #19	SLCO4A1 (ENSBTAG00000016388) #20	ENSBTAG00000051754 #21	GATA5 (ENSBTAG00000047944) #22	RBBP8NL (ENSBTAG00000003163) #23	CABLES2 (ENSBTAG00000020797) #24	RPS21 (ENSBTAG00000020795) #25	LAMA5 (ENSBTAG00000003061) #26	ADRM1 (ENSBTAG00000003058) #27	OSBPL2 (ENSBTAG00000017402) #28	HRH3 (ENSBTAG00000031625) #29	MTG2 (ENSBTAG00000014442) #30	SS18L1 (ENSBTAG00000014438) #31	PSMA7 (ENSBTAG00000005127) #32	LSM14B (ENSBTAG00000021558) #33	TAF4 (ENSBTAG00000047991) #34	CDH4 (ENSBTAG00000015058) #35	CDH26 (ENSBTAG00000020261)	FAM217B (ENSBTAG00000045509) #37
Bos_a	ANCESTRAL SPECIES	7	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00960000188905	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695.g #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Domestic yak	MODERN SPECIES	3	ARFGAP1 (ENSBGRG00000018203) #7	ENSBGRG00000018634	BIRC7 (ENSBGRG00000019380) #9	ENSBGRG00000019416 #10	BHLHE23 (ENSBGRG00000019503) #11	SLC17A9 (ENSBGRG00000019565) #12	GID8 (ENSBGRG00000020140) #13	DIDO1 (ENSBGRG00000020262) #14	TCFL5 (ENSBGRG00000020529) #15	COL9A3 (ENSBGRG00000020604)	OGFR (ENSBGRG00000020644) #17	MRGBP (ENSBGRG00000020678) #18	ENSBGRG00000020718	NTSR1 (ENSBGRG00000020731) #19	SLCO4A1 (ENSBGRG00000020768) #20	GATA5 (ENSBGRG00000020941) #22	ENSBGRG00000021000 #23	CABLES2 (ENSBGRG00000021073) #24	RPS21 (ENSBGRG00000021116) #25	LAMA5 (ENSBGRG00000021195) #26	ADRM1 (ENSBGRG00000022694) #27	OSBPL2 (ENSBGRG00000022810) #28	HRH3 (ENSBGRG00000022906) #29	MTG2 (ENSBGRG00000022940) #30	SS18L1 (ENSBGRG00000022962) #31	ENSBGRG00000023084 #32	LSM14B (ENSBGRG00000023122) #33	TAF4 (ENSBGRG00000023255) #34	CDH4 (ENSBGRG00000023355) #35	CDH26 (ENSBGRG00000024093)	FAM217B (ENSBGRG00000024168) #37
Wild yak	MODERN SPECIES	621						SLC17A9 (ENSBMUG00000022234) #12	GID8 (ENSBMUG00000022245) #13	ENSBMUG00000022288 #14	TCFL5 (ENSBMUG00000022308) #15	COL9A3 (ENSBMUG00000022351)	ENSBMUG00000022375 #17	ENSBMUG00000022392	NTSR1 (ENSBMUG00000022403) #19	SLCO4A1 (ENSBMUG00000022420) #20	ENSBMUG00000022435 #21	GATA5 (ENSBMUG00000022483) #22	ENSBMUG00000022504 #23	ENSBMUG00000022522 #24	RPS21 (ENSBMUG00000022528) #25	LAMA5 (ENSBMUG00000023329) #26	ADRM1 (ENSBMUG00000023715) #27	OSBPL2 (ENSBMUG00000023757) #28	HRH3 (ENSBMUG00000023821) #29	MTG2 (ENSBMUG00000023832) #30	SS18L1 (ENSBMUG00000023848) #31	ENSBMUG00000023856 #32	ENSBMUG00000023861 #33	ENSBMUG00000023866 #33
American bison	MODERN SPECIES	3089																GATA5 (ENSBBBG00000021683) #22	RBBP8NL (ENSBBBG00000021697) #23	CABLES2 (ENSBBBG00000007197) #24	RPS21 (ENSBBBG00000021727) #25	LAMA5 (ENSBBBG00000023435) #26	ADRM1 (ENSBBBG00000023624) #27	OSBPL2 (ENSBBBG00000023688) #28	ENSBBBG00000008484 #29	MTG2 (ENSBBBG00000023710) #30	SS18L1 (ENSBBBG00000023728) #31	ENSBBBG00000023734 #32	LSM14B (ENSBBBG00000023774) #33	TAF4 (ENSBBBG00000023791) #34	CDH4 (ENSBBBG00000023802) #35	CDH26 (ENSBBBG00000008691)	FAM217B (ENSBBBG00000008802) #37
Siberian musk deer	MODERN SPECIES	1193	ARFGAP1 (ENSMMSG00000021515) #7	BIRC7 (ENSMMSG00000021444) #9	YTHDF1 (ENSMMSG00000021404) #10	BHLHE23 (ENSMMSG00000021377) #11	SLC17A9 (ENSMMSG00000021281) #12	GID8 (ENSMMSG00000021243) #13	DIDO1 (ENSMMSG00000021079) #14	ENSMMSG00000021045	TCFL5 (ENSMMSG00000021020) #15	ENSMMSG00000020900 #16	OGFR (ENSMMSG00000020874) #17	MRGBP (ENSMMSG00000020847) #18	NTSR1 (ENSMMSG00000020812) #19	ENSMMSG00000020792 #21	SLCO4A1 (ENSMMSG00000020739) #20	GATA5 (ENSMMSG00000020681) #22	RBBP8NL (ENSMMSG00000020610) #23	CABLES2 (ENSMMSG00000020551) #24	RPS21 (ENSMMSG00000020504) #25	LAMA5 (ENSMMSG00000020211) #26	ADRM1 (ENSMMSG00000020092) #27	OSBPL2 (ENSMMSG00000020018) #28	HRH3 (ENSMMSG00000019990) #29	MTG2 (ENSMMSG00000019960) #30	SS18L1 (ENSMMSG00000019914) #31	PSMA7 (ENSMMSG00000019883) #32	LSM14B (ENSMMSG00000019784) #33	TAF4 (ENSMMSG00000019546) #34	CDH4 (ENSMMSG00000019459) #35	CDH26 (ENSMMSG00000019362)	FAM217B (ENSMMSG00000019344) #37
Camelidae	ANCESTRAL SPECIES	10	ENSGT00940000163709	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00390000013839 #27	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00530000063859.b	ENSGT00940000154543.a #37	ENSGT00940000161921	ENSGT00940000157562
Arabian camel	MODERN SPECIES	10	COL20A1 (ENSCDRG00005007791)	ARFGAP1 (ENSCDRG00005007544) #7	ENSCDRG00005007451 #8	YTHDF1 (ENSCDRG00005007257) #10	BHLHE23 (ENSCDRG00005007231) #11	SLC17A9 (ENSCDRG00005007165) #12	GID8 (ENSCDRG00005007119) #13	ENSCDRG00005007053 #14	TCFL5 (ENSCDRG00005006962) #15	ENSCDRG00005006839 #16	OGFR (ENSCDRG00005006813) #17	MRGBP (ENSCDRG00005006775) #18	NTSR1 (ENSCDRG00005006734) #19	ENSCDRG00005006702 #21	SLCO4A1 (ENSCDRG00005006674) #20	GATA5 (ENSCDRG00005006581) #22	ENSCDRG00005006256 #24	RPS21 (ENSCDRG00005006197) #25	ADRM1 (ENSCDRG00005005112) #27	HRH3 (ENSCDRG00005005077) #29	MTG2 (ENSCDRG00005005059) #30	SS18L1 (ENSCDRG00005005016) #31	PSMA7 (ENSCDRG00005004975) #32	LSM14B (ENSCDRG00005004926) #33	TAF4 (ENSCDRG00005004789) #34	CDH4 (ENSCDRG00005004411) #35	CDH26 (ENSCDRG00005004313)	ENSCDRG00005004290 #37	PPP1R3D (ENSCDRG00005004276)	PHACTR3 (ENSCDRG00005003583)	EDN3 (ENSCDRG00005003447)
Suina	ANCESTRAL SPECIES	9	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000161921
Pig	MODERN SPECIES	8	ARFGAP1 (ENSSSCG00000032235) #7	NKAIN4 (ENSSSCG00000036544) #8	ENSSSCG00000036109 #9	YTHDF1 (ENSSSCG00000040086) #10	BHLHE23 (ENSSSCG00000054477) #11	SLC17A9 (ENSSSCG00000040931) #12	GID8 (ENSSSCG00000034173) #13	ENSSSCG00000033946 #14	TCFL5 (ENSSSCG00000038631) #15	COL9A3 (ENSSSCG00000040554)	ENSSSCG00000056699 #17	MRGBP (ENSSSCG00000053677) #18	NTSR1 (ENSSSCG00000038278) #19	ENSSSCG00000040565 #21	SLCO4A1 (ENSSSCG00000039419) #20	GATA5 (ENSSSCG00000007538) #22	RBBP8NL (ENSSSCG00000007539) #23	CABLES2 (ENSSSCG00000007540) #24	RPS21 (ENSSSCG00000021825) #25	LAMA5 (ENSSSCG00000032761) #26	ADRM1 (ENSSSCG00000038718) #27	OSBPL2 (ENSSSCG00000036835) #28	HRH3 (ENSSSCG00000038578) #29	MTG2 (ENSSSCG00000037369) #30	SS18L1 (ENSSSCG00000035448) #31	PSMA7 (ENSSSCG00000033332) #32	LSM14B (ENSSSCG00000026052) #33	TAF4 (ENSSSCG00000024694) #34	ENSSSCG00000046508	CDH4 (ENSSSCG00000025784) #35	FAM217B (ENSSSCG00000007531) #37
Chacoan peccary	MODERN SPECIES	28																GATA5 (ENSCWAG00000000852) #22	RBBP8NL (ENSCWAG00000000819) #23	CABLES2 (ENSCWAG00000000782) #24	RPS21 (ENSCWAG00000000764) #25
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Carnivora	ANCESTRAL SPECIES	20	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000157562
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00930000152812	ENSGT00940000161589
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00930000152812	ENSGT00940000161589
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00930000152812	ENSGT00940000161589
leopard	MODERN SPECIES	105	CHRNA4 (ENSPPRG00000004145)	ENSPPRG00000003520	ARFGAP1 (ENSPPRG00000022748) #7	ENSPPRG00000023805 #8	BIRC7 (ENSPPRG00000024060) #9	YTHDF1 (ENSPPRG00000020805) #10	SLC17A9 (ENSPPRG00000019375) #12	GID8 (ENSPPRG00000015995) #13	ENSPPRG00000015125 #14	ENSPPRG00000010546 #15	COL9A3 (ENSPPRG00000010419)	ENSPPRG00000009399 #17	MRGBP (ENSPPRG00000008348) #18	NTSR1 (ENSPPRG00000007852) #19	SLCO4A1 (ENSPPRG00000007640) #20	GATA5 (ENSPPRG00000006784) #22	RBBP8NL (ENSPPRG00000005756) #23	CABLES2 (ENSPPRG00000005036) #24	RPS21 (ENSPPRG00000004689) #25	ADRM1 (ENSPPRG00000020760) #27	OSBPL2 (ENSPPRG00000018989) #28	HRH3 (ENSPPRG00000013350) #29	MTG2 (ENSPPRG00000010251) #30	SS18L1 (ENSPPRG00000010006) #31	PSMA7 (ENSPPRG00000009414) #32	LSM14B (ENSPPRG00000009197) #33	TAF4 (ENSPPRG00000007879) #34	CDH4 (ENSPPRG00000007638) #35	ENSPPRG00000003048	CDH26 (ENSPPRG00000001923)	PPP1R3D (ENSPPRG00000017666)
lion	MODERN SPECIES	3	CHRNA4 (ENSPLOG00000017836)	ENSPLOG00000017179	ARFGAP1 (ENSPLOG00000016829) #7	BIRC7 (ENSPLOG00000016713) #9	YTHDF1 (ENSPLOG00000016671) #10	BHLHE23 (ENSPLOG00000016645) #11	SLC17A9 (ENSPLOG00000016527) #12	GID8 (ENSPLOG00000016492) #13	DIDO1 (ENSPLOG00000016452) #14	TCFL5 (ENSPLOG00000016420) #15	COL9A3 (ENSPLOG00000016182)	OGFR (ENSPLOG00000016077) #17	MRGBP (ENSPLOG00000016026) #18	NTSR1 (ENSPLOG00000015983) #19	SLCO4A1 (ENSPLOG00000015950) #20	GATA5 (ENSPLOG00000015886) #22	ENSPLOG00000015816 #23	CABLES2 (ENSPLOG00000015700) #24	RPS21 (ENSPLOG00000015612) #25	ENSPLOG00000015480 #26	ADRM1 (ENSPLOG00000015368) #27	OSBPL2 (ENSPLOG00000015228) #28	HRH3 (ENSPLOG00000015155) #29	MTG2 (ENSPLOG00000015109) #30	SS18L1 (ENSPLOG00000015011) #31	PSMA7 (ENSPLOG00000014943) #32	LSM14B (ENSPLOG00000014849) #33	TAF4 (ENSPLOG00000014564) #34	CDH4 (ENSPLOG00000014187) #35	ENSPLOG00000014142	ENSPLOG00000014104
Cat	MODERN SPECIES	2	CHRNA4 (ENSFCAG00000030656)	COL20A1 (ENSFCAG00000008920)	ARFGAP1 (ENSFCAG00000008919) #7	BIRC7 (ENSFCAG00000008918) #9	YTHDF1 (ENSFCAG00000008917) #10	BHLHE23 (ENSFCAG00000048281) #11	SLC17A9 (ENSFCAG00000025163) #12	GID8 (ENSFCAG00000045255) #13	DIDO1 (ENSFCAG00000015588) #14	TCFL5 (ENSFCAG00000024469) #15	COL9A3 (ENSFCAG00000001332)	ENSFCAG00000043168 #17	MRGBP (ENSFCAG00000028818) #18	NTSR1 (ENSFCAG00000000383) #19	SLCO4A1 (ENSFCAG00000000381) #20	GATA5 (ENSFCAG00000001058) #22	RBBP8NL (ENSFCAG00000001057) #23	CABLES2 (ENSFCAG00000001056) #24	RPS21 (ENSFCAG00000033393) #25	LAMA5 (ENSFCAG00000018350) #26	OSBPL2 (ENSFCAG00000003247) #28	HRH3 (ENSFCAG00000026486) #29	MTG2 (ENSFCAG00000003250) #30	SS18L1 (ENSFCAG00000018839) #31	PSMA7 (ENSFCAG00000003249) #32	LSM14B (ENSFCAG00000003248) #33	TAF4 (ENSFCAG00000011994) #34	CDH4 (ENSFCAG00000011987) #35	TETY1 (ENSFCAG00000036141)	CDH26 (ENSFCAG00000005129)	FAM217B (ENSFCAG00000005128) #37
Caniformia	ANCESTRAL SPECIES		ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000157562
Canidae	ANCESTRAL SPECIES	41	ENSGT00940000157989.b #8	ENSGT00940000160406.c #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589
Canis_lupus	ANCESTRAL SPECIES	13	ENSGT00940000157989.b #8	ENSGT00940000160406.c #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589
Dingo	MODERN SPECIES	343	BIRC7 (ENSCAFG00020001235) #9	ENSCAFG00020001219	YTHDF1 (ENSCAFG00020001214) #10	BHLHE23 (ENSCAFG00020001194) #11	SLC17A9 (ENSCAFG00020001162) #12	GID8 (ENSCAFG00020001150) #13	ENSCAFG00020001136 #14	ENSCAFG00020001124 #14	TCFL5 (ENSCAFG00020001087) #15	ENSCAFG00020001056 #16	ENSCAFG00020001048 #17	MRGBP (ENSCAFG00020001037) #18	NTSR1 (ENSCAFG00020001009) #19	ENSCAFG00020001006 #21	SLCO4A1 (ENSCAFG00020000949) #20	GATA5 (ENSCAFG00020000926) #22	RBBP8NL (ENSCAFG00020000919) #23	CABLES2 (ENSCAFG00020000888) #24	ENSCAFG00020000870 ##25	ENSCAFG00020000144 #26	ADRM1 (ENSCAFG00020000118) #27	OSBPL2 (ENSCAFG00020000096) #28	HRH3 (ENSCAFG00020022208) #29	MTG2 (ENSCAFG00020022198) #30	SS18L1 (ENSCAFG00020022196) #31	PSMA7 (ENSCAFG00020022159) #32	LSM14B (ENSCAFG00020022150) #33	TAF4 (ENSCAFG00020022127) #34	CDH4 (ENSCAFG00020022116) #35	CDH26 (ENSCAFG00020022110)	FAM217B (ENSCAFG00020022109) #37
Dog	MODERN SPECIES	16	NKAIN4 (ENSCAFG00845019207) #8	ENSCAFG00845019116 #9	ENSCAFG00845018982 #10	YTHDF1 (ENSCAFG00845018849) #10	BHLHE23 (ENSCAFG00845018744) #11	SLC17A9 (ENSCAFG00845018620) #12	GID8 (ENSCAFG00845018539) #13	DIDO1 (ENSCAFG00845018415) #14	TCFL5 (ENSCAFG00845018226) #15	COL9A3 (ENSCAFG00845018010) #16	ENSCAFG00845017856 #17	MRGBP (ENSCAFG00845017766) #18	NTSR1 (ENSCAFG00845017702) #19	ENSCAFG00845017679 #21	SLCO4A1 (ENSCAFG00845017528) #20	GATA5 (ENSCAFG00845017212) #22	RBBP8NL (ENSCAFG00845017078) #23	CABLES2 (ENSCAFG00845016981) #24	RPS21 (ENSCAFG00845016932) #25	ADRM1 (ENSCAFG00845016538) #27	OSBPL2 (ENSCAFG00845016342) #28	HRH3 (ENSCAFG00845016267) #29	MTG2 (ENSCAFG00845016227) #30	SS18L1 (ENSCAFG00845016170) #31	ENSCAFG00845016116 #32	LSM14B (ENSCAFG00845015999) #33	TAF4 (ENSCAFG00845015879) #34	CDH4 (ENSCAFG00845015748) #35	CDH26 (ENSCAFG00845015611)	ENSCAFG00845015558 #37	PPP1R3D (ENSCAFG00845015533)
Red fox	MODERN SPECIES	108	ARFGAP1 (ENSVVUG00000015255) #7	NKAIN4 (ENSVVUG00000015272) #8	ENSVVUG00000015273 #9	YTHDF1 (ENSVVUG00000015275) #10	ENSVVUG00000015283 #11	SLC17A9 (ENSVVUG00000015289) #12	GID8 (ENSVVUG00000015314) #13	DIDO1 (ENSVVUG00000015321) #14	TCFL5 (ENSVVUG00000015386) #15	ENSVVUG00000015387 #16	ENSVVUG00000015395 #17	MRGBP (ENSVVUG00000015402) #18	NTSR1 (ENSVVUG00000015408) #19	SLCO4A1 (ENSVVUG00000015410) #20	ENSVVUG00000015436 #21	GATA5 (ENSVVUG00000015452) #22	RBBP8NL (ENSVVUG00000015483) #23	ENSVVUG00000015488 #24	ENSVVUG00000015503 #26	ADRM1 (ENSVVUG00000015782) #27	OSBPL2 (ENSVVUG00000015789) #28	HRH3 (ENSVVUG00000015800) #29	MTG2 (ENSVVUG00000015810) #30	SS18L1 (ENSVVUG00000015825) #31	PSMA7 (ENSVVUG00000015857) #32	LSM14B (ENSVVUG00000015920) #33	TAF4 (ENSVVUG00000015939) #34	CDH4 (ENSVVUG00000016015) #35	CDH26 (ENSVVUG00000016039)	ENSVVUG00000016075 #37	PPP1R3D (ENSVVUG00000016077)
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Mustelinae	ANCESTRAL SPECIES	58	ENSGT00940000159329	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00530000063859.b
American mink	MODERN SPECIES	82	EEF1A2 (ENSNVIG00000019476)	KCNQ2 (ENSNVIG00000019509)	CHRNA4 (ENSNVIG00000019659)	ARFGAP1 (ENSNVIG00000019685) #7	BIRC7 (ENSNVIG00000019781) #9	YTHDF1 (ENSNVIG00000019799) #10	SLC17A9 (ENSNVIG00000019834) #12	GID8 (ENSNVIG00000019869) #13	ENSNVIG00000019894 #14	ENSNVIG00000019943 #15	COL9A3 (ENSNVIG00000019962)	MRGBP (ENSNVIG00000020047) #18	NTSR1 (ENSNVIG00000020055) #19	SLCO4A1 (ENSNVIG00000020066) #20	ENSNVIG00000020092 #21	GATA5 (ENSNVIG00000020102) #22	RBBP8NL (ENSNVIG00000020118) #23	CABLES2 (ENSNVIG00000020141) #24	RPS21 (ENSNVIG00000020157) #25	LAMA5 (ENSNVIG00000020229) #26	ADRM1 (ENSNVIG00000021284) #27	OSBPL2 (ENSNVIG00000021309) #28	HRH3 (ENSNVIG00000021366) #29	MTG2 (ENSNVIG00000021425) #30	SS18L1 (ENSNVIG00000021432) #31	PSMA7 (ENSNVIG00000021436) #32	LSM14B (ENSNVIG00000021449) #33	TAF4 (ENSNVIG00000021480) #34	CDH4 (ENSNVIG00000021602) #35	FAM217B (ENSNVIG00000021647) #37	SYCP2 (ENSNVIG00000021662)
Ferret	MODERN SPECIES	236	YTHDF1 (ENSMPUG00000008111) #10	ENSMPUG00000008107	SLC17A9 (ENSMPUG00000008097) #12	GID8 (ENSMPUG00000008060) #13	DIDO1 (ENSMPUG00000008006) #14	ENSMPUG00000008000 #15	COL9A3 (ENSMPUG00000007936)	ENSMPUG00000007934 #17	MRGBP (ENSMPUG00000007912) #18	ENSMPUG00000007908	ENSMPUG00000007904	NTSR1 (ENSMPUG00000007899) #19	SLCO4A1 (ENSMPUG00000007893) #20	ENSMPUG00000020176	ENSMPUG00000007889	GATA5 (ENSMPUG00000007886) #22	RBBP8NL (ENSMPUG00000007879) #23	CABLES2 (ENSMPUG00000007872) #24	ENSMPUG00000020175	LAMA5 (ENSMPUG00000007845) #26	ADRM1 (ENSMPUG00000007782) #27	OSBPL2 (ENSMPUG00000007774) #28	ENSMPUG00000007771	HRH3 (ENSMPUG00000007765) #29	MTG2 (ENSMPUG00000007761) #30	SS18L1 (ENSMPUG00000007669) #31	PSMA7 (ENSMPUG00000007664) #32	LSM14B (ENSMPUG00000007584) #33	TAF4 (ENSMPUG00000007569) #34	CDH4 (ENSMPUG00000007233) #35	ENSMPUG00000007229
Ursidae	ANCESTRAL SPECIES	14	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b.x #25	ENSGT00940000156537 #26	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695.d #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37	ENSGT00940000161921
Giant Panda	MODERN SPECIES	4	CHRNA4 (ENSAMEG00000001515)	ENSAMEG00000017307 #7	ENSAMEG00000026916 #7	NKAIN4 (ENSAMEG00000017310) #8	BIRC7 (ENSAMEG00000017319) #9	YTHDF1 (ENSAMEG00000017323) #10	SLC17A9 (ENSAMEG00000017329) #12	GID8 (ENSAMEG00000017333) #13	DIDO1 (ENSAMEG00000017335) #14	ENSAMEG00000017341 #15	COL9A3 (ENSAMEG00000017342)	ENSAMEG00000029718 #17	ENSAMEG00000025015 #18	SLCO4A1 (ENSAMEG00000023949) #20	ENSAMEG00000025108	GATA5 (ENSAMEG00000028627) #22	RBBP8NL (ENSAMEG00000017386) #23	ENSAMEG00000017392 #24	ENSAMEG00000024061 ##25	ENSAMEG00000013512 #28	HRH3 (ENSAMEG00000013427) #29	MTG2 (ENSAMEG00000026455) #30	SS18L1 (ENSAMEG00000013466) #31	PSMA7 (ENSAMEG00000013451) #32	LSM14B (ENSAMEG00000013430) #33	TAF4 (ENSAMEG00000024016) #34	CDH4 (ENSAMEG00000012866) #35	CDH26 (ENSAMEG00000012384)	SYCP2 (ENSAMEG00000012412)	PHACTR3 (ENSAMEG00000027213)	EDN3 (ENSAMEG00000012458)
Ursus	ANCESTRAL SPECIES	377																ENSGT00940000160139 #22	ENSGT00530000063835.a #23
Polar bear	MODERN SPECIES	148	EEF1A2 (ENSUMAG00000022209)	ENSUMAG00000022217	ENSUMAG00000022242	ARFGAP1 (ENSUMAG00000022278) #7	BIRC7 (ENSUMAG00000022285) #9	YTHDF1 (ENSUMAG00000022290) #10	ENSUMAG00000022294	SLC17A9 (ENSUMAG00000022304) #12	GID8 (ENSUMAG00000022317) #13	DIDO1 (ENSUMAG00000022326) #14	ENSUMAG00000022355 #15	ENSUMAG00000022356 #16	ENSUMAG00000022360 #18	NTSR1 (ENSUMAG00000022365) #19	ENSUMAG00000022371 #21	ENSUMAG00000022375 #22	CABLES2 (ENSUMAG00000022377) #24	ENSUMAG00000022396 #28	MTG2 (ENSUMAG00000022407) #30	SS18L1 (ENSUMAG00000000050) #31	PSMA7 (ENSUMAG00000000149) #32	LSM14B (ENSUMAG00000000480) #33	TAF4 (ENSUMAG00000000503) #34	CDH4 (ENSUMAG00000000805) #35	CDH26 (ENSUMAG00000000888)	ENSUMAG00000001001 #37	SYCP2 (ENSUMAG00000001014)	PHACTR3 (ENSUMAG00000001100)
American black bear	MODERN SPECIES	6608																GATA5 (ENSUAMG00000014916) #22	RBBP8NL (ENSUAMG00000014918) #23
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Equus	ANCESTRAL SPECIES	8	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00390000018266.r
Horse	MODERN SPECIES	14	NKAIN4 (ENSECAG00000039065) #8	BIRC7 (ENSECAG00000020286) #9	YTHDF1 (ENSECAG00000019475) #10	BHLHE23 (ENSECAG00000031478) #11	SLC17A9 (ENSECAG00000012252) #12	GID8 (ENSECAG00000011992) #13	DIDO1 (ENSECAG00000007150) #14	ENSECAG00000004464 #15	ENSECAG00000056017 #15	COL9A3 (ENSECAG00000023357) #16	OGFR (ENSECAG00000021836) #17	MRGBP (ENSECAG00000021079) #18	NTSR1 (ENSECAG00000019337) #19	ENSECAG00000030764 #21	SLCO4A1 (ENSECAG00000016658) #20	GATA5 (ENSECAG00000034866) #22	RBBP8NL (ENSECAG00000015475) #23	CABLES2 (ENSECAG00000013898) #24	ENSECAG00000044360 #25	LAMA5 (ENSECAG00000023274) #26	ADRM1 (ENSECAG00000052775) #27	OSBPL2 (ENSECAG00000010200) #28	HRH3 (ENSECAG00000008149) #29	MTG2 (ENSECAG00000020567) #30	SS18L1 (ENSECAG00000018310) #31	PSMA7 (ENSECAG00000014168) #32	LSM14B (ENSECAG00000010659) #33	TAF4 (ENSECAG00000023048) #34	CDH4 (ENSECAG00000023333) #35	CDH26 (ENSECAG00000020738)	ENSECAG00000036432
Donkey	MODERN SPECIES	6	ENSEASG00005023177	ARFGAP1 (ENSEASG00005023181) #7	NKAIN4 (ENSEASG00005023184) #8	BIRC7 (ENSEASG00005023185) #9	YTHDF1 (ENSEASG00005023186) #10	SLC17A9 (ENSEASG00005023189) #12	GID8 (ENSEASG00005023190) #13	ENSEASG00005023191 #14	ENSEASG00005023192 #15	ENSEASG00005036171 #15	ENSEASG00005034582 #16	OGFR (ENSEASG00005023195) #17	MRGBP (ENSEASG00005026220) #18	NTSR1 (ENSEASG00005023199) #19	SLCO4A1 (ENSEASG00005023200) #20	GATA5 (ENSEASG00005023204) #22	RBBP8NL (ENSEASG00005023205) #23	CABLES2 (ENSEASG00005023206) #24	ENSEASG00005032761 #25	LAMA5 (ENSEASG00005023208) #26	ADRM1 (ENSEASG00005023210) #27	OSBPL2 (ENSEASG00005023211) #28	HRH3 (ENSEASG00005034836) #29	MTG2 (ENSEASG00005033789) #30	SS18L1 (ENSEASG00005023216) #31	PSMA7 (ENSEASG00005023217) #32	LSM14B (ENSEASG00005023218) #33	TAF4 (ENSEASG00005023219) #34	ENSEASG00005023220 #35	CDH26 (ENSEASG00005023223)	ENSEASG00005038533
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Megabat	MODERN SPECIES	494																GATA5 (ENSPVAG00000011581) #22
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Microbat	MODERN SPECIES	1489															SLCO4A1 (ENSMLUG00000012879) #20	GATA5 (ENSMLUG00000000363) #22	RBBP8NL (ENSMLUG00000000353) #23	CABLES2 (ENSMLUG00000000350) #24	RPS21 (ENSMLUG00000000346) #25	LAMA5 (ENSMLUG00000000325) #26	ADRM1 (ENSMLUG00000000322) #27	OSBPL2 (ENSMLUG00000000316) #28	HRH3 (ENSMLUG00000000314) #29	MTG2 (ENSMLUG00000000311) #30	SS18L1 (ENSMLUG00000015710) #31	PSMA7 (ENSMLUG00000000308) #32	LSM14B (ENSMLUG00000000304) #33	TAF4 (ENSMLUG00000010291) #34
Greater horseshoe bat	MODERN SPECIES	15	ARFGAP1 (ENSRFEG00010015968) #7	NKAIN4 (ENSRFEG00010016435) #8	BIRC7 (ENSRFEG00010016554) #9	YTHDF1 (ENSRFEG00010016741) #10	BHLHE23 (ENSRFEG00010016835) #11	SLC17A9 (ENSRFEG00010016863) #12	GID8 (ENSRFEG00010017068) #13	ENSRFEG00010017096 #14	TCFL5 (ENSRFEG00010017418) #15	ENSRFEG00010017452 #16	OGFR (ENSRFEG00010017492) #17	MRGBP (ENSRFEG00010017510) #18	NTSR1 (ENSRFEG00010017545) #19	SLCO4A1 (ENSRFEG00010017567) #20	ENSRFEG00010017737 #21	GATA5 (ENSRFEG00010017774) #22	RBBP8NL (ENSRFEG00010017852) #23	CABLES2 (ENSRFEG00010017891) #24	RPS21 (ENSRFEG00010018046) #25	ADRM1 (ENSRFEG00010019448) #27	OSBPL2 (ENSRFEG00010019536) #28	HRH3 (ENSRFEG00010019606) #29	MTG2 (ENSRFEG00010019620) #30	SS18L1 (ENSRFEG00010019636) #31	PSMA7 (ENSRFEG00010019679) #32	LSM14B (ENSRFEG00010019740) #33	TAF4 (ENSRFEG00010019851) #34	CDH4 (ENSRFEG00010020057) #35	CDH26 (ENSRFEG00010020152)	FAM217B (ENSRFEG00010020258) #37	PPP1R3D (ENSRFEG00010020266)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000160139 #22
Hedgehog	MODERN SPECIES	8471																GATA5 (ENSEEUG00000004590) #22
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Primates	ANCESTRAL SPECIES	17	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00910000147450	ENSGT00940000161589
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00910000147787	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00910000148312	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34
Hominidae	ANCESTRAL SPECIES	18	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00910000147787	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00910000148312	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00910000147787	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00910000148312	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00910000147787	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00910000148312	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35
Pan	ANCESTRAL SPECIES	15	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247.a	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00910000147787	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00910000148312	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b.c #34	ENSGT00940000158073 #35
Chimpanzee	MODERN SPECIES	11	NKAIN4 (ENSPTRG00000013732) #8	BIRC7 (ENSPTRG00000013731) #9	YTHDF1 (ENSPTRG00000013730) #10	BHLHE23 (ENSPTRG00000013728) #11	SLC17A9 (ENSPTRG00000013727) #12	GID8 (ENSPTRG00000013726) #13	DIDO1 (ENSPTRG00000013725) #14	ENSPTRG00000049832	TCFL5 (ENSPTRG00000023366) #15	COL9A3 (ENSPTRG00000013721) #16	OGFR (ENSPTRG00000013720) #17	MRGBP (ENSPTRG00000013719) #18	NTSR1 (ENSPTRG00000013718) #19	ENSPTRG00000042677 #21	SLCO4A1 (ENSPTRG00000013715) #20	GATA5 (ENSPTRG00000013711) #22	ENSPTRG00000045349	RBBP8NL (ENSPTRG00000013710) #23	CABLES2 (ENSPTRG00000013709) #24	ENSPTRG00000013708 ##25	ENSPTRG00000052490	ENSPTRG00000049805 #26	ADRM1 (ENSPTRG00000013704) #27	OSBPL2 (ENSPTRG00000013703) #28	HRH3 (ENSPTRG00000013702) #29	MTG2 (ENSPTRG00000013701) #30	SS18L1 (ENSPTRG00000013700) #31	PSMA7 (ENSPTRG00000013699) #32	LSM14B (ENSPTRG00000013696) #33	TAF4 (ENSPTRG00000013695) #34	CDH4 (ENSPTRG00000013693) #35
Bonobo	MODERN SPECIES	11	BIRC7 (ENSPPAG00000027746) #9	YTHDF1 (ENSPPAG00000023277) #10	SLC17A9 (ENSPPAG00000015837) #12	GID8 (ENSPPAG00000041274) #13	DIDO1 (ENSPPAG00000035601) #14	ENSPPAG00000034363	ENSPPAG00000033377 #15	COL9A3 (ENSPPAG00000031491)	OGFR (ENSPPAG00000026028) #17	ENSPPAG00000011919 #18	ENSPPAG00000039273 #18	ENSPPAG00000041361	NTSR1 (ENSPPAG00000043046) #19	ENSPPAG00000039222 #21	SLCO4A1 (ENSPPAG00000040142) #20	GATA5 (ENSPPAG00000033487) #22	ENSPPAG00000013876	RBBP8NL (ENSPPAG00000020970) #23	ENSPPAG00000041254 #24	ENSPPAG00000043545 ##25	ENSPPAG00000014667	LAMA5 (ENSPPAG00000030723) #26	ADRM1 (ENSPPAG00000025509) #27	OSBPL2 (ENSPPAG00000013340) #28	HRH3 (ENSPPAG00000025470) #29	MTG2 (ENSPPAG00000042468) #30	SS18L1 (ENSPPAG00000035700) #31	PSMA7 (ENSPPAG00000026506) #32	LSM14B (ENSPPAG00000035799) #33	ENSPPAG00000028916 #34	CDH4 (ENSPPAG00000031709) #35
Human	MODERN SPECIES	12	COL20A1 (ENSG00000101203)	ARFGAP1 (ENSG00000101199) #7	NKAIN4 (ENSG00000101198) #8	BIRC7 (ENSG00000101197) #9	YTHDF1 (ENSG00000149658) #10	BHLHE23 (ENSG00000125533) #11	SLC17A9 (ENSG00000101194) #12	GID8 (ENSG00000101193) #13	DIDO1 (ENSG00000101191) #14	TCFL5 (ENSG00000101190) #15	COL9A3 (ENSG00000092758)	OGFR (ENSG00000060491) #17	MRGBP (ENSG00000101189) #18	NTSR1 (ENSG00000101188) #19	SLCO4A1 (ENSG00000101187) #20	GATA5 (ENSG00000130700) #22	RBBP8NL (ENSG00000130701) #23	CABLES2 (ENSG00000149679) #24	RPS21 (ENSG00000171858) #25	LAMA5 (ENSG00000130702) #26	ADRM1 (ENSG00000130706) #27	OSBPL2 (ENSG00000130703) #28	HRH3 (ENSG00000101180) #29	MTG2 (ENSG00000101181) #30	SS18L1 (ENSG00000184402) #31	PSMA7 (ENSG00000101182) #32	LSM14B (ENSG00000149657) #33	TAF4 (ENSG00000130699) #34	CDH4 (ENSG00000179242) #35	CDH26 (ENSG00000124215)	PPP1R3D (ENSG00000132825)
Gorilla	MODERN SPECIES	11	BIRC7 (ENSGGOG00000008343) #9	YTHDF1 (ENSGGOG00000008340) #10	BHLHE23 (ENSGGOG00000040834) #11	SLC17A9 (ENSGGOG00000001599) #12	GID8 (ENSGGOG00000036471) #13	DIDO1 (ENSGGOG00000001594) #14	ENSGGOG00000027339	TCFL5 (ENSGGOG00000017041) #15	COL9A3 (ENSGGOG00000017028)	OGFR (ENSGGOG00000017022) #17	MRGBP (ENSGGOG00000017018) #18	ENSGGOG00000042663	NTSR1 (ENSGGOG00000017017) #19	ENSGGOG00000042804 #21	SLCO4A1 (ENSGGOG00000007516) #20	GATA5 (ENSGGOG00000000120) #22	ENSGGOG00000043681	RBBP8NL (ENSGGOG00000000119) #23	CABLES2 (ENSGGOG00000000117) #24	ENSGGOG00000023745 ##25	LAMA5 (ENSGGOG00000008462) #26	ADRM1 (ENSGGOG00000008457) #27	OSBPL2 (ENSGGOG00000008445) #28	HRH3 (ENSGGOG00000005654) #29	MTG2 (ENSGGOG00000005648) #30	SS18L1 (ENSGGOG00000005638) #31	PSMA7 (ENSGGOG00000005634) #32	LSM14B (ENSGGOG00000005630) #33	ENSGGOG00000002111 #34	CDH4 (ENSGGOG00000000182) #35	ENSGGOG00000036542
Orangutan	MODERN SPECIES	11	COL20A1 (ENSPPYG00000011230)	ARFGAP1 (ENSPPYG00000011229) #7	NKAIN4 (ENSPPYG00000011228) #8	BIRC7 (ENSPPYG00000011227) #9	YTHDF1 (ENSPPYG00000011226) #10	BHLHE23 (ENSPPYG00000033782) #11	SLC17A9 (ENSPPYG00000011222) #12	GID8 (ENSPPYG00000011221) #13	DIDO1 (ENSPPYG00000011220) #14	TCFL5 (ENSPPYG00000011219) #15	COL9A3 (ENSPPYG00000037415)	ENSPPYG00000011218 #17	ENSPPYG00000011217 #18	NTSR1 (ENSPPYG00000011216) #19	SLCO4A1 (ENSPPYG00000011213) #20	GATA5 (ENSPPYG00000011208) #22	RBBP8NL (ENSPPYG00000011207) #23	CABLES2 (ENSPPYG00000011206) #24	ENSPPYG00000011205 ##25	OSBPL2 (ENSPPYG00000011201) #28	HRH3 (ENSPPYG00000011199) #29	MTG2 (ENSPPYG00000011198) #30	SS18L1 (ENSPPYG00000011197) #31	PSMA7 (ENSPPYG00000034580) #32	LSM14B (ENSPPYG00000011194) #33	TAF4 (ENSPPYG00000029916) #34	CDH4 (ENSPPYG00000011193) #35	CDH26 (ENSPPYG00000011189)	FAM217B (ENSPPYG00000011188) #37	PPP1R3D (ENSPPYG00000011187)	SYCP2 (ENSPPYG00000011186)
Gibbon	MODERN SPECIES	3	BIRC7 (ENSNLEG00000009978) #9	ENSNLEG00000028421 #10	ENSNLEG00000031234	ENSNLEG00000009969 #12	GID8 (ENSNLEG00000009967) #13	DIDO1 (ENSNLEG00000009953) #14	ENSNLEG00000032503 #15	ENSNLEG00000009920 #16	ENSNLEG00000009914 #17	ENSNLEG00000009904 #18	ENSNLEG00000032112 #18	NTSR1 (ENSNLEG00000009910) #19	ENSNLEG00000030128	SLCO4A1 (ENSNLEG00000009897) #20	ENSNLEG00000031811 #21	GATA5 (ENSNLEG00000015926) #22	ENSNLEG00000034192	RBBP8NL (ENSNLEG00000015942) #23	CABLES2 (ENSNLEG00000015932) #24	ENSNLEG00000028252 ##25	ENSNLEG00000027234	LAMA5 (ENSNLEG00000028345) #26	ADRM1 (ENSNLEG00000015858) #27	OSBPL2 (ENSNLEG00000015814) #28	HRH3 (ENSNLEG00000026621) #29	MTG2 (ENSNLEG00000015799) #30	ENSNLEG00000015795 #31	PSMA7 (ENSNLEG00000015772) #32	LSM14B (ENSNLEG00000015757) #33	TAF4 (ENSNLEG00000015722) #34	CDH4 (ENSNLEG00000015745) #35
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00910000148025	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00910000147450
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00910000148025	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00910000147450
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00910000147201	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00910000148025	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00910000147450
Macaca	ANCESTRAL SPECIES	16	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00910000147201	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00910000147450	ENSGT00940000161589
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00390000017515.p ##25	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Rhesus	MODERN SPECIES	1	ARFGAP1 (ENSMMUG00000015911) #7	NKAIN4 (ENSMMUG00000009231) #8	BIRC7 (ENSMMUG00000009229) #9	YTHDF1 (ENSMMUG00000009227) #10	BHLHE23 (ENSMMUG00000037896) #11	SLC17A9 (ENSMMUG00000005713) #12	GID8 (ENSMMUG00000050053) #13	DIDO1 (ENSMMUG00000019310) #14	TCFL5 (ENSMMUG00000008229) #15	ENSMMUG00000016859 #16	OGFR (ENSMMUG00000016856) #17	MRGBP (ENSMMUG00000046848) #18	NTSR1 (ENSMMUG00000016854) #19	ENSMMUG00000016851 #21	SLCO4A1 (ENSMMUG00000016848) #20	GATA5 (ENSMMUG00000017584) #22	RBBP8NL (ENSMMUG00000020933) #23	CABLES2 (ENSMMUG00000005011) #24	RPS21 (ENSMMUG00000005006) #25	OSBPL2 (ENSMMUG00000012623) #28	HRH3 (ENSMMUG00000050324) #29	MTG2 (ENSMMUG00000012607) #30	SS18L1 (ENSMMUG00000012606) #31	PSMA7 (ENSMMUG00000018354) #32	LSM14B (ENSMMUG00000014084) #33	TAF4 (ENSMMUG00000008696) #34	CDH4 (ENSMMUG00000012314) #35	ENSMMUG00000052443	CDH26 (ENSMMUG00000008123)	PPP1R3D (ENSMMUG00000019469)	FAM217B (ENSMMUG00000057303) #37
Crab-eating macaque	MODERN SPECIES	1	NKAIN4 (ENSMFAG00000003175) #8	ENSMFAG00000045233 #9	ENSMFAG00000050102	YTHDF1 (ENSMFAG00000042868) #10	ENSMFAG00000060017	SLC17A9 (ENSMFAG00000044450) #12	GID8 (ENSMFAG00000064422) #13	DIDO1 (ENSMFAG00000000130) #14	ENSMFAG00000002692 #15	ENSMFAG00000002720 #16	OGFR (ENSMFAG00000037888) #17	MRGBP (ENSMFAG00000058768) #18	ENSMFAG00000030438 #19	ENSMFAG00000001871 #21	SLCO4A1 (ENSMFAG00000041624) #20	GATA5 (ENSMFAG00000041967) #22	RBBP8NL (ENSMFAG00000037646) #23	CABLES2 (ENSMFAG00000016607) #24	RPS21 (ENSMFAG00000002515) ##25	OSBPL2 (ENSMFAG00000030160) #28	HRH3 (ENSMFAG00000040768) #29	MTG2 (ENSMFAG00000045680) #30	ADRM1 (ENSMFAG00000042099) #27	SS18L1 (ENSMFAG00000038339) #31	PSMA7 (ENSMFAG00000000723) #32	LSM14B (ENSMFAG00000041479) #33	TAF4 (ENSMFAG00000002330) #34	CDH4 (ENSMFAG00000042158) #35	ENSMFAG00000063149	CDH26 (ENSMFAG00000034675)	FAM217B (ENSMFAG00000030015) #37
Pig-tailed macaque	MODERN SPECIES	462	BIRC7 (ENSMNEG00000040250) #9	YTHDF1 (ENSMNEG00000030851) #10	ENSMNEG00000025670	BHLHE23 (ENSMNEG00000001627) #11	SLC17A9 (ENSMNEG00000028689) #12	GID8 (ENSMNEG00000037263) #13	DIDO1 (ENSMNEG00000035888) #14	TCFL5 (ENSMNEG00000041869) #15	ENSMNEG00000037036 #16	OGFR (ENSMNEG00000014861) #17	MRGBP (ENSMNEG00000038652) #18	NTSR1 (ENSMNEG00000030073) #19	ENSMNEG00000027467	SLCO4A1 (ENSMNEG00000031292) #20	ENSMNEG00000037283 #21	GATA5 (ENSMNEG00000041625) #22	RBBP8NL (ENSMNEG00000034032) #23	CABLES2 (ENSMNEG00000032286) #24	ENSMNEG00000045270 #25	LAMA5 (ENSMNEG00000040397) #26	ADRM1 (ENSMNEG00000025734) #27	OSBPL2 (ENSMNEG00000032024) #28	ENSMNEG00000034576	HRH3 (ENSMNEG00000044771) #29	MTG2 (ENSMNEG00000035874) #30	SS18L1 (ENSMNEG00000039319) #31	PSMA7 (ENSMNEG00000027997) #32	LSM14B (ENSMNEG00000045573) #33	TAF4 (ENSMNEG00000035762) #34	CDH4 (ENSMNEG00000020065) #35	ENSMNEG00000036031
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00910000147201	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00910000148025	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589
Olive baboon	MODERN SPECIES	7	ARFGAP1 (ENSPANG00000033349) #7	NKAIN4 (ENSPANG00000011180) #8	BIRC7 (ENSPANG00000021470) #9	YTHDF1 (ENSPANG00000021472) #10	BHLHE23 (ENSPANG00000042385) #11	SLC17A9 (ENSPANG00000011749) #12	GID8 (ENSPANG00000011748) #13	DIDO1 (ENSPANG00000026186) #14	TCFL5 (ENSPANG00000021056) #15	ENSPANG00000024126 #16	OGFR (ENSPANG00000048448) #17	MRGBP (ENSPANG00000043588) #18	NTSR1 (ENSPANG00000014255) #19	ENSPANG00000030177 #21	SLCO4A1 (ENSPANG00000014254) #20	GATA5 (ENSPANG00000035220) #22	RBBP8NL (ENSPANG00000018571) #23	CABLES2 (ENSPANG00000018573) #24	ENSPANG00000021054 ##25	ADRM1 (ENSPANG00000021463) #27	OSBPL2 (ENSPANG00000011171) #28	HRH3 (ENSPANG00000011170) #29	MTG2 (ENSPANG00000024124) #30	ENSPANG00000040229 #31	PSMA7 (ENSPANG00000020513) #32	LSM14B (ENSPANG00000011747) #33	TAF4 (ENSPANG00000022570) #34	CDH4 (ENSPANG00000011746) #35	CDH26 (ENSPANG00000021462)	FAM217B (ENSPANG00000015362) #37	PPP1R3D (ENSPANG00000018275)
Cercopithecinae_d	ANCESTRAL SPECIES	47	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00910000147201	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00910000148025	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589
Sooty mangabey	MODERN SPECIES	187	BIRC7 (ENSCATG00000015429) #9	YTHDF1 (ENSCATG00000033272) #10	ENSCATG00000021474	BHLHE23 (ENSCATG00000022765) #11	SLC17A9 (ENSCATG00000040220) #12	GID8 (ENSCATG00000038096) #13	DIDO1 (ENSCATG00000032733) #14	TCFL5 (ENSCATG00000016160) #15	COL9A3 (ENSCATG00000030703)	OGFR (ENSCATG00000034931) #17	MRGBP (ENSCATG00000036826) #18	NTSR1 (ENSCATG00000043092) #19	ENSCATG00000021769	SLCO4A1 (ENSCATG00000031528) #20	ENSCATG00000036195 #21	GATA5 (ENSCATG00000036346) #22	RBBP8NL (ENSCATG00000011302) #23	CABLES2 (ENSCATG00000008047) #24	RPS21 (ENSCATG00000031953) #25	LAMA5 (ENSCATG00000014362) #26	ADRM1 (ENSCATG00000042561) #27	OSBPL2 (ENSCATG00000012207) #28	HRH3 (ENSCATG00000028495) #29	MTG2 (ENSCATG00000032978) #30	SS18L1 (ENSCATG00000038095) #31	PSMA7 (ENSCATG00000012259) #32	LSM14B (ENSCATG00000036006) #33	TAF4 (ENSCATG00000002458) #34	CDH4 (ENSCATG00000042334) #35
Drill	MODERN SPECIES	1087	BIRC7 (ENSMLEG00000008457) #9	YTHDF1 (ENSMLEG00000009252) #10	ENSMLEG00000004545	SLC17A9 (ENSMLEG00000036356) #12	GID8 (ENSMLEG00000042442) #13	DIDO1 (ENSMLEG00000034306) #14	ENSMLEG00000007821 #15	COL9A3 (ENSMLEG00000041767)	OGFR (ENSMLEG00000040857) #17	ENSMLEG00000040901 #18	ENSMLEG00000041581 #18	ENSMLEG00000006099	NTSR1 (ENSMLEG00000036433) #19	ENSMLEG00000031976 #21	SLCO4A1 (ENSMLEG00000026008) #20	GATA5 (ENSMLEG00000032309) #22	RBBP8NL (ENSMLEG00000031990) #23	CABLES2 (ENSMLEG00000042843) #24	ENSMLEG00000036605 #25	LAMA5 (ENSMLEG00000036374) #26	ADRM1 (ENSMLEG00000041503) #27	ENSMLEG00000042538	OSBPL2 (ENSMLEG00000043090) #28	HRH3 (ENSMLEG00000027666) #29	MTG2 (ENSMLEG00000040729) #30	SS18L1 (ENSMLEG00000037833) #31	PSMA7 (ENSMLEG00000033853) #32	LSM14B (ENSMLEG00000040895) #33	TAF4 (ENSMLEG00000041573) #34	CDH4 (ENSMLEG00000040626) #35	CDH26 (ENSMLEG00000033250)
Vervet Monkey	MODERN SPECIES	11	NKAIN4 (ENSCSAG00000016293) #8	BIRC7 (ENSCSAG00000016275) #9	YTHDF1 (ENSCSAG00000016266) #10	BHLHE23 (ENSCSAG00000018736) #11	SLC17A9 (ENSCSAG00000016249) #12	GID8 (ENSCSAG00000016219) #13	DIDO1 (ENSCSAG00000016212) #14	ENSCSAG00000016203 #15	ENSCSAG00000018737	ENSCSAG00000016170 #16	OGFR (ENSCSAG00000016119) #17	MRGBP (ENSCSAG00000016107) #18	NTSR1 (ENSCSAG00000016088) #19	SLCO4A1 (ENSCSAG00000016079) #20	ENSCSAG00000016074	GATA5 (ENSCSAG00000016070) #22	RBBP8NL (ENSCSAG00000016058) #23	CABLES2 (ENSCSAG00000016030) #24	RPS21 (ENSCSAG00000016013) #25	LAMA5 (ENSCSAG00000015940) #26	ADRM1 (ENSCSAG00000015796) #27	OSBPL2 (ENSCSAG00000015788) #28	HRH3 (ENSCSAG00000015781) #29	MTG2 (ENSCSAG00000015774) #30	SS18L1 (ENSCSAG00000015769) #31	PSMA7 (ENSCSAG00000015753) #32	LSM14B (ENSCSAG00000015729) #33	TAF4 (ENSCSAG00000015714) #34	CDH4 (ENSCSAG00000015698) #35	ENSCSAG00000015691	ENSCSAG00000015686
Rhinopithecus	ANCESTRAL SPECIES	13	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT00910000147247	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00910000148025	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000168632 #36
Golden snub-nosed monkey	MODERN SPECIES	1209	BIRC7 (ENSRROG00000039594) #9	YTHDF1 (ENSRROG00000033014) #10	BHLHE23 (ENSRROG00000038786) #11	SLC17A9 (ENSRROG00000041713) #12	GID8 (ENSRROG00000037608) #13	DIDO1 (ENSRROG00000044763) #14	ENSRROG00000004971	ENSRROG00000042285 #15	ENSRROG00000029777 #16	OGFR (ENSRROG00000012775) #17	ENSRROG00000034485 #18	ENSRROG00000013236	NTSR1 (ENSRROG00000029419) #19	ENSRROG00000043466 #21	SLCO4A1 (ENSRROG00000036205) #20	GATA5 (ENSRROG00000031877) #22	RBBP8NL (ENSRROG00000040315) #23	CABLES2 (ENSRROG00000043457) #24	RPS21 (ENSRROG00000038602) #25	LAMA5 (ENSRROG00000035759) #26	ADRM1 (ENSRROG00000019480) #27	ENSRROG00000038495	OSBPL2 (ENSRROG00000029664) #28	HRH3 (ENSRROG00000042867) #29	MTG2 (ENSRROG00000030772) #30	SS18L1 (ENSRROG00000040133) #31	PSMA7 (ENSRROG00000043126) #32	LSM14B (ENSRROG00000042949) #33	TAF4 (ENSRROG00000043238) #34	CDH4 (ENSRROG00000029814) #35	ENSRROG00000044130 #36
Black snub-nosed monkey	MODERN SPECIES	671	NKAIN4 (ENSRBIG00000044975) #8	BIRC7 (ENSRBIG00000044970) #9	YTHDF1 (ENSRBIG00000044959) #10	BHLHE23 (ENSRBIG00000026436) #11	SLC17A9 (ENSRBIG00000044949) #12	GID8 (ENSRBIG00000044944) #13	DIDO1 (ENSRBIG00000028408) #14	TCFL5 (ENSRBIG00000033479) #15	ENSRBIG00000034671 #16	OGFR (ENSRBIG00000030910) #17	MRGBP (ENSRBIG00000035316) #18	ENSRBIG00000030344	NTSR1 (ENSRBIG00000034200) #19	ENSRBIG00000033976 #21	SLCO4A1 (ENSRBIG00000027762) #20	GATA5 (ENSRBIG00000043083) #22	RBBP8NL (ENSRBIG00000041927) #23	CABLES2 (ENSRBIG00000039825) #24	RPS21 (ENSRBIG00000023738) #25	LAMA5 (ENSRBIG00000020450) #26	ADRM1 (ENSRBIG00000032506) #27	OSBPL2 (ENSRBIG00000008547) #28	HRH3 (ENSRBIG00000036605) #29	MTG2 (ENSRBIG00000039343) #30	SS18L1 (ENSRBIG00000043216) #31	PSMA7 (ENSRBIG00000030294) #32	LSM14B (ENSRBIG00000033461) #33	TAF4 (ENSRBIG00000039196) #34
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00940000163709	ENSGT00890000139515.e #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000168632 #36	ENSGT00940000154543.a #37
Mas night monkey	MODERN SPECIES	628	CHRNA4 (ENSANAG00000009699)	COL20A1 (ENSANAG00000023543)	ENSANAG00000036435 #7	ENSANAG00000033769 #8	BIRC7 (ENSANAG00000036822) #9	ENSANAG00000034786 #10	SLC17A9 (ENSANAG00000037919) #12	GID8 (ENSANAG00000038136) #13	DIDO1 (ENSANAG00000036369) #14	ENSANAG00000033851 #15	COL9A3 (ENSANAG00000029986)	OGFR (ENSANAG00000023834) #17	ENSANAG00000020630 #18	NTSR1 (ENSANAG00000028125) #19	SLCO4A1 (ENSANAG00000025751) #20	GATA5 (ENSANAG00000032190) #22	RBBP8NL (ENSANAG00000026519) #23	CABLES2 (ENSANAG00000032007) #24	RPS21 (ENSANAG00000026964) #25	LAMA5 (ENSANAG00000030209) #26	ENSANAG00000022779 #27	OSBPL2 (ENSANAG00000000648) #28	HRH3 (ENSANAG00000037989) #29	MTG2 (ENSANAG00000038077) #30	SS18L1 (ENSANAG00000037732) #31	PSMA7 (ENSANAG00000010130) #32	LSM14B (ENSANAG00000037915) #33	TAF4 (ENSANAG00000025843) #34	CDH4 (ENSANAG00000021592) #35
Cebidae	ANCESTRAL SPECIES	13	ENSGT00940000159329	ENSGT00940000163709	ENSGT00890000139515.e #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000168632 #36	ENSGT00940000154543.a #37
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00940000159329	ENSGT00940000163709	ENSGT00890000139515.e #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00530000063859.b
Capuchin	MODERN SPECIES	311						SLC17A9 (ENSCCAG00000025278) #12	GID8 (ENSCCAG00000033031) #13	DIDO1 (ENSCCAG00000034787) #14	TCFL5 (ENSCCAG00000034782) #15	COL9A3 (ENSCCAG00000026899)	OGFR (ENSCCAG00000035981) #17	ENSCCAG00000021432 #18	ENSCCAG00000034861 #18	NTSR1 (ENSCCAG00000014565) #19	SLCO4A1 (ENSCCAG00000020112) #20	GATA5 (ENSCCAG00000015339) #22	RBBP8NL (ENSCCAG00000030370) #23	CABLES2 (ENSCCAG00000029965) #24	ENSCCAG00000036700 #25	LAMA5 (ENSCCAG00000021643) #26	ADRM1 (ENSCCAG00000027146) #27	OSBPL2 (ENSCCAG00000035550) #28	HRH3 (ENSCCAG00000033589) #29	MTG2 (ENSCCAG00000035332) #30	SS18L1 (ENSCCAG00000034514) #31	PSMA7 (ENSCCAG00000019388) #32	LSM14B (ENSCCAG00000021267) #33	TAF4 (ENSCCAG00000020328) #34	CDH4 (ENSCCAG00000022146) #35	CDH26 (ENSCCAG00000020268)	SYCP2 (ENSCCAG00000016906)
Bolivian squirrel monkey	MODERN SPECIES	93	CHRNA4 (ENSSBOG00000029663)	COL20A1 (ENSSBOG00000028118)	ARFGAP1 (ENSSBOG00000030523) #7	NKAIN4 (ENSSBOG00000022021) #8	BIRC7 (ENSSBOG00000030127) #9	YTHDF1 (ENSSBOG00000027278) #10	SLC17A9 (ENSSBOG00000029063) #12	GID8 (ENSSBOG00000020603) #13	DIDO1 (ENSSBOG00000028181) #14	ENSSBOG00000026416 #15	ENSSBOG00000032867 #16	OGFR (ENSSBOG00000027155) #17	ENSSBOG00000023786 #18	NTSR1 (ENSSBOG00000001221) #19	SLCO4A1 (ENSSBOG00000030164) #20	GATA5 (ENSSBOG00000034203) #22	RBBP8NL (ENSSBOG00000028400) #23	CABLES2 (ENSSBOG00000032273) #24	RPS21 (ENSSBOG00000021410) #25	LAMA5 (ENSSBOG00000032418) #26	ADRM1 (ENSSBOG00000026290) #27	OSBPL2 (ENSSBOG00000021294) #28	HRH3 (ENSSBOG00000032318) #29	MTG2 (ENSSBOG00000029055) #30	SS18L1 (ENSSBOG00000021541) #31	PSMA7 (ENSSBOG00000030036) #32	LSM14B (ENSSBOG00000032820) #33	TAF4 (ENSSBOG00000017534) #34	CDH4 (ENSSBOG00000028115) #35	ENSSBOG00000014792 #36	SYCP2 (ENSSBOG00000030028)
Tarsier	MODERN SPECIES	4271																GATA5 (ENSTSYG00000030932) #22	RBBP8NL (ENSTSYG00000034370) #23	CABLES2 (ENSTSYG00000007069) #24	RPS21 (ENSTSYG00000007061) #25	LAMA5 (ENSTSYG00000030913) #26	ADRM1 (ENSTSYG00000026096) #27	OSBPL2 (ENSTSYG00000012007) #28	HRH3 (ENSTSYG00000033763) #29	ENSTSYG00000030198 #30	SS18L1 (ENSTSYG00000034160) #31	PSMA7 (ENSTSYG00000010932) #32	LSM14B (ENSTSYG00000031914) #33
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00940000159329	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Lemuriformes	ANCESTRAL SPECIES	10	ENSGT00940000159329	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Lemuriformes_a	ANCESTRAL SPECIES	139	ENSGT00940000159329	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35
Coquerels sifaka	MODERN SPECIES	594	EEF1A2 (ENSPCOG00000018056)	KCNQ2 (ENSPCOG00000013133)	CHRNA4 (ENSPCOG00000017991)	ARFGAP1 (ENSPCOG00000027176) #7	BIRC7 (ENSPCOG00000015457) #9	YTHDF1 (ENSPCOG00000025969) #10	SLC17A9 (ENSPCOG00000014828) #12	GID8 (ENSPCOG00000019546) #13	DIDO1 (ENSPCOG00000023499) #14	TCFL5 (ENSPCOG00000017126) #15	ENSPCOG00000024112 #16	OGFR (ENSPCOG00000020031) #17	MRGBP (ENSPCOG00000023597) #18	NTSR1 (ENSPCOG00000015702) #19	SLCO4A1 (ENSPCOG00000021209) #20	GATA5 (ENSPCOG00000007837) #22	RBBP8NL (ENSPCOG00000028470) #23	CABLES2 (ENSPCOG00000025315) #24	RPS21 (ENSPCOG00000013052) #25	LAMA5 (ENSPCOG00000019475) #26	ADRM1 (ENSPCOG00000021357) #27	OSBPL2 (ENSPCOG00000016868) #28	HRH3 (ENSPCOG00000026734) #29	MTG2 (ENSPCOG00000022764) #30	SS18L1 (ENSPCOG00000013363) #31	PSMA7 (ENSPCOG00000012673) #32	LSM14B (ENSPCOG00000013625) #33	TAF4 (ENSPCOG00000028002) #34	CDH4 (ENSPCOG00000027008) #35
Greater bamboo lemur	MODERN SPECIES	803		ARFGAP1 (ENSPSMG00000017014) #7	BIRC7 (ENSPSMG00000016930) #9	YTHDF1 (ENSPSMG00000016924) #10	BHLHE23 (ENSPSMG00000016882) #11	SLC17A9 (ENSPSMG00000016878) #12	GID8 (ENSPSMG00000016856) #13	DIDO1 (ENSPSMG00000016842) #14	TCFL5 (ENSPSMG00000016807) #15	COL9A3 (ENSPSMG00000016799)	OGFR (ENSPSMG00000016781) #17	MRGBP (ENSPSMG00000016757) #18	NTSR1 (ENSPSMG00000016746) #19	ENSPSMG00000016742 #21	SLCO4A1 (ENSPSMG00000016739) #20	GATA5 (ENSPSMG00000016732) #22	RBBP8NL (ENSPSMG00000016729) #23	CABLES2 (ENSPSMG00000016724) #24
Mouse lemur	MODERN SPECIES	9	EEF1A2 (ENSMICG00000015319)	KCNQ2 (ENSMICG00000031055)	CHRNA4 (ENSMICG00000035086)	ARFGAP1 (ENSMICG00000013625) #7	BIRC7 (ENSMICG00000008469) #9	YTHDF1 (ENSMICG00000032266) #10	SLC17A9 (ENSMICG00000045180) #12	GID8 (ENSMICG00000046912) #13	DIDO1 (ENSMICG00000006217) #14	TCFL5 (ENSMICG00000030702) #15	ENSMICG00000043180 #16	OGFR (ENSMICG00000045669) #17	MRGBP (ENSMICG00000048156) #18	NTSR1 (ENSMICG00000026504) #19	SLCO4A1 (ENSMICG00000001139) #20	GATA5 (ENSMICG00000037048) #22	RBBP8NL (ENSMICG00000031675) #23	ENSMICG00000006412 #24	RPS21 (ENSMICG00000046562) #25	LAMA5 (ENSMICG00000013411) #26	ADRM1 (ENSMICG00000013395) #27	OSBPL2 (ENSMICG00000013373) #28	HRH3 (ENSMICG00000003541) #29	MTG2 (ENSMICG00000035055) #30	SS18L1 (ENSMICG00000032545) #31	PSMA7 (ENSMICG00000014687) #32	LSM14B (ENSMICG00000014675) #33	TAF4 (ENSMICG00000004029) #34	CDH4 (ENSMICG00000004615) #35	CDH26 (ENSMICG00000002587)	FAM217B (ENSMICG00000002583) #37
Bushbaby	MODERN SPECIES	138	KCNQ2 (ENSOGAG00000009901)	CHRNA4 (ENSOGAG00000003054)	ARFGAP1 (ENSOGAG00000031121) #7	BIRC7 (ENSOGAG00000027612) #9	YTHDF1 (ENSOGAG00000000480) #10	ENSOGAG00000031010 #11	SLC17A9 (ENSOGAG00000013837) #12	GID8 (ENSOGAG00000013834) #13	DIDO1 (ENSOGAG00000013822) #14	TCFL5 (ENSOGAG00000013819) #15	ENSOGAG00000011190 #16	OGFR (ENSOGAG00000011186) #17	MRGBP (ENSOGAG00000011183) #18	NTSR1 (ENSOGAG00000027155) #19	SLCO4A1 (ENSOGAG00000005124) #20	GATA5 (ENSOGAG00000025085) #22	RBBP8NL (ENSOGAG00000000946) #23	CABLES2 (ENSOGAG00000000945) #24	RPS21 (ENSOGAG00000016673) #25	LAMA5 (ENSOGAG00000000942) #26	ADRM1 (ENSOGAG00000000941) #27	OSBPL2 (ENSOGAG00000000939) #28	HRH3 (ENSOGAG00000027837) #29	MTG2 (ENSOGAG00000000933) #30	SS18L1 (ENSOGAG00000034040) #31	ENSOGAG00000000931 #32	LSM14B (ENSOGAG00000003915) #33	TAF4 (ENSOGAG00000024820) #34	ENSOGAG00000028531	CDH4 (ENSOGAG00000007919) #35	ENSOGAG00000026737
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Glires	ANCESTRAL SPECIES	17	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b.e.a.b #25	ENSGT00390000017515.o.b.f #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37	ENSGT00940000161921	ENSGT00530000063859.b
Golden Hamster	MODERN SPECIES	664	Chrna4 (ENSMAUG00000001465)	ENSMAUG00000021616	Arfgap1 (ENSMAUG00000015799) #7	Nkain4 (ENSMAUG00000011539) #8	Birc7 (ENSMAUG00000019324) #9	Ythdf1 (ENSMAUG00000017660) #10	Bhlhe23 (ENSMAUG00000009252) #11	Slc17a9 (ENSMAUG00000019462) #12	Dido1 (ENSMAUG00000016487) #14	Tcfl5 (ENSMAUG00000015318) #15	Col9a3 (ENSMAUG00000012721) #16	Ogfr (ENSMAUG00000018534) #17	Mrgbp (ENSMAUG00000017237) #18	Ntsr1 (ENSMAUG00000017871) #19	Slco4a1 (ENSMAUG00000009594) #20	Gata5 (ENSMAUG00000004902) #22	Rbbp8nl (ENSMAUG00000009217) #23	Lama5 (ENSMAUG00000015139) #26	ENSMAUG00000021991 #27	Osbpl2 (ENSMAUG00000014762) #28	Hrh3 (ENSMAUG00000012652) #29	Mtg2 (ENSMAUG00000018040) #30	Ss18l1 (ENSMAUG00000016777) #31	Psma7 (ENSMAUG00000011223) #32	Lsm14b (ENSMAUG00000020700) #33	Taf4 (ENSMAUG00000015258) #34	Cdh4 (ENSMAUG00000001328) #35	Cdh26 (ENSMAUG00000000843)	Fam217b (ENSMAUG00000018766) #37	Ppp1r3d (ENSMAUG00000008145)	ENSMAUG00000006215
Chinese hamster chok1gshd	MODERN SPECIES	185																Gata5 (ENSCGRG00001007839) #22	Rbbp8nl (ENSCGRG00001007442) #23
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b.f #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Prairie vole	MODERN SPECIES	357	ENSMOCG00000022336	Arfgap1 (ENSMOCG00000000921) #7	Nkain4 (ENSMOCG00000021378) #8	Birc7 (ENSMOCG00000007072) #9	Ythdf1 (ENSMOCG00000013573) #10	Bhlhe23 (ENSMOCG00000010535) #11	Slc17a9 (ENSMOCG00000021060) #12	Gid8 (ENSMOCG00000022789) #13	Dido1 (ENSMOCG00000016348) #14	Tcfl5 (ENSMOCG00000013113) #15	Col9a3 (ENSMOCG00000008409) #16	Ogfr (ENSMOCG00000014592) #17	Mrgbp (ENSMOCG00000000356) #18	Ntsr1 (ENSMOCG00000006208) #19	Slco4a1 (ENSMOCG00000018880) #20	Gata5 (ENSMOCG00000017810) #22	Rbbp8nl (ENSMOCG00000019010) #23	Cables2 (ENSMOCG00000022984) #24	ENSMOCG00000021976 #25	Lama5 (ENSMOCG00000017230) #26	ENSMOCG00000014522 #27	Osbpl2 (ENSMOCG00000021030) #28	Hrh3 (ENSMOCG00000019433) #29	Mtg2 (ENSMOCG00000018038) #30	Ss18l1 (ENSMOCG00000015419) #31	ENSMOCG00000000346 #32	ENSMOCG00000020600 #33	Taf4 (ENSMOCG00000007554) #34	Cdh4 (ENSMOCG00000021512) #35	Cdh26 (ENSMOCG00000015531)	Fam217b (ENSMOCG00000014566) #37
Northern American deer mouse	MODERN SPECIES	17	Arfgap1 (ENSPEMG00000020266) #7	Nkain4 (ENSPEMG00000020232) #8	Birc7 (ENSPEMG00000020215) #9	Ythdf1 (ENSPEMG00000020199) #10	Bhlhe23 (ENSPEMG00000013766) #11	Slc17a9 (ENSPEMG00000020148) #12	Gid8 (ENSPEMG00000020136) #13	Dido1 (ENSPEMG00000020026) #14	Tcfl5 (ENSPEMG00000019973) #15	Col9a3 (ENSPEMG00000019951) #16	Ogfr (ENSPEMG00000019927) #17	Mrgbp (ENSPEMG00000030337) #18	Ntsr1 (ENSPEMG00000019912) #19	ENSPEMG00000031188 #21	Slco4a1 (ENSPEMG00000019875) #20	Gata5 (ENSPEMG00000009349) #22	Rbbp8nl (ENSPEMG00000008846) #23	Cables2 (ENSPEMG00000014665) #24	ENSPEMG00000012806 #25	ENSPEMG00000026336 #26	ENSPEMG00000020024 #27	Osbpl2 (ENSPEMG00000019925) #28	Hrh3 (ENSPEMG00000008738) #29	Mtg2 (ENSPEMG00000008216) #30	Ss18l1 (ENSPEMG00000002000) #31	ENSPEMG00000000274 #32	Lsm14b (ENSPEMG00000017688) #33	Taf4 (ENSPEMG00000015031) #34	Cdh4 (ENSPEMG00000013577) #35	Cdh26 (ENSPEMG00000001082)	Fam217b (ENSPEMG00000026646) #37
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Mus	ANCESTRAL SPECIES	1	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Mus_A	ANCESTRAL SPECIES		ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Mouse	MODERN SPECIES	11	Col20a1 (ENSMUSG00000016356)	Arfgap1 (ENSMUSG00000027575) #7	Nkain4 (ENSMUSG00000027574) #8	Birc7 (ENSMUSG00000038840) #9	Ythdf1 (ENSMUSG00000038848) #10	Bhlhe23 (ENSMUSG00000045493) #11	Slc17a9 (ENSMUSG00000023393) #12	Gid8 (ENSMUSG00000027573) #13	Dido1 (ENSMUSG00000038914) #14	Tcfl5 (ENSMUSG00000038932) #15	Col9a3 (ENSMUSG00000027570) #16	Ogfr (ENSMUSG00000049401) #17	Mrgbp (ENSMUSG00000027569) #18	Ntsr1 (ENSMUSG00000027568) #19	Slco4a1 (ENSMUSG00000038963) #20	Gata5 (ENSMUSG00000015627) #22	Rbbp8nl (ENSMUSG00000038980) #23	Cables2 (ENSMUSG00000038990) #24	Rps21 (ENSMUSG00000039001) #25	Lama5 (ENSMUSG00000015647) #26	Adrm1 (ENSMUSG00000039041) #27	Osbpl2 (ENSMUSG00000039050) #28	Hrh3 (ENSMUSG00000039059) #29	Mtg2 (ENSMUSG00000039069) #30	Ss18l1 (ENSMUSG00000039086) #31	Psma7 (ENSMUSG00000027566) #32	Lsm14b (ENSMUSG00000039108) #33	Taf4 (ENSMUSG00000039117) #34	Cdh4 (ENSMUSG00000000305) #35	Cdh26 (ENSMUSG00000039155)	Fam217b (ENSMUSG00000070476) #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00960000192285	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Steppe mouse	MODERN SPECIES	3150						Slc17a9 (ENSMSIG00000017823) #12	Gid8 (ENSMSIG00000017793) #13	Dido1 (ENSMSIG00000017715) #14	ENSMSIG00000017707 #15	Col9a3 (ENSMSIG00000017585) #16	Ogfr (ENSMSIG00000017554) #17	Mrgbp (ENSMSIG00000017522) #18	Ntsr1 (ENSMSIG00000017500) #19	Slco4a1 (ENSMSIG00000017476) #20	ENSMSIG00000017437	Gata5 (ENSMSIG00000017417) #22	Rbbp8nl (ENSMSIG00000017371) #23	Cables2 (ENSMSIG00000017347) #24	ENSMSIG00000017324 #25	ENSMSIG00000016398 #28	ENSMSIG00000016249 #29	ENSMSIG00000016190 #30	ENSMSIG00000016142 #31	Psma7 (ENSMSIG00000016080) #32	ENSMSIG00000016029 #33	ENSMSIG00000015731 #34	ENSMSIG00000015713	Cdh4 (ENSMSIG00000015601) #35	ENSMSIG00000015591	Cdh26 (ENSMSIG00000015463)	Fam217b (ENSMSIG00000015440) #37
spretus	MODERN SPECIES	11	Col20a1 (MGP_SPRETEiJ_G0025719)	Arfgap1 (MGP_SPRETEiJ_G0025718) #7	Nkain4 (MGP_SPRETEiJ_G0025717) #8	Birc7 (MGP_SPRETEiJ_G0025716) #9	Ythdf1 (MGP_SPRETEiJ_G0025715) #10	Bhlhe23 (MGP_SPRETEiJ_G0025714) #11	Slc17a9 (MGP_SPRETEiJ_G0025713) #12	Gid8 (MGP_SPRETEiJ_G0025712) #13	Dido1 (MGP_SPRETEiJ_G0025711) #14	Tcfl5 (MGP_SPRETEiJ_G0025710) #15	Col9a3 (MGP_SPRETEiJ_G0025709) #16	Ogfr (MGP_SPRETEiJ_G0025708) #17	Mrgbp (MGP_SPRETEiJ_G0025707) #18	Ntsr1 (MGP_SPRETEiJ_G0025706) #19	Slco4a1 (MGP_SPRETEiJ_G0025705) #20	Gata5 (MGP_SPRETEiJ_G0025704) #22	Rbbp8nl (MGP_SPRETEiJ_G0025703) #23	Cables2 (MGP_SPRETEiJ_G0025702) #24	Rps21 (MGP_SPRETEiJ_G0025701) #25	Lama5 (MGP_SPRETEiJ_G0025700) #26	MGP_SPRETEiJ_G0025699 #27	Osbpl2 (MGP_SPRETEiJ_G0025698) #28	Hrh3 (MGP_SPRETEiJ_G0025697) #29	MGP_SPRETEiJ_G0025696 #30	Ss18l1 (MGP_SPRETEiJ_G0025695) #31	Psma7 (MGP_SPRETEiJ_G0025694) #32	Lsm14b (MGP_SPRETEiJ_G0025693) #33	MGP_SPRETEiJ_G0025692 #34	Cdh4 (MGP_SPRETEiJ_G0025691) #35	Cdh26 (MGP_SPRETEiJ_G0025690)	Fam217b (MGP_SPRETEiJ_G0025689) #37
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0024794	Arfgap1 (MGP_CAROLIEiJ_G0024793) #7	Nkain4 (MGP_CAROLIEiJ_G0024792) #8	Birc7 (MGP_CAROLIEiJ_G0024791) #9	Ythdf1 (MGP_CAROLIEiJ_G0024790) #10	Bhlhe23 (MGP_CAROLIEiJ_G0024789) #11	Slc17a9 (MGP_CAROLIEiJ_G0024788) #12	Gid8 (MGP_CAROLIEiJ_G0024787) #13	MGP_CAROLIEiJ_G0024786 #14	Tcfl5 (MGP_CAROLIEiJ_G0024785) #15	Col9a3 (MGP_CAROLIEiJ_G0024784) #16	Ogfr (MGP_CAROLIEiJ_G0024783) #17	Mrgbp (MGP_CAROLIEiJ_G0024782) #18	Ntsr1 (MGP_CAROLIEiJ_G0024781) #19	MGP_CAROLIEiJ_G0024780 #20	Gata5 (MGP_CAROLIEiJ_G0024779) #22	MGP_CAROLIEiJ_G0024778 #24	MGP_CAROLIEiJ_G0024777 #26	MGP_CAROLIEiJ_G0024776 #27	MGP_CAROLIEiJ_G0024775 #28	Hrh3 (MGP_CAROLIEiJ_G0024774) #29	MGP_CAROLIEiJ_G0024773 #30	Ss18l1 (MGP_CAROLIEiJ_G0024772) #31	Psma7 (MGP_CAROLIEiJ_G0024771) #32	Lsm14b (MGP_CAROLIEiJ_G0024770) #33	MGP_CAROLIEiJ_G0024769 #34	Cdh4 (MGP_CAROLIEiJ_G0024768) #35	Ppp1r3d (MGP_CAROLIEiJ_G0024767)	Phactr3 (MGP_CAROLIEiJ_G0024765)	Edn3 (MGP_CAROLIEiJ_G0024764)	Zfp831 (MGP_CAROLIEiJ_G0024763)
Shrew mouse	MODERN SPECIES	16	Col20a1 (MGP_PahariEiJ_G0026241)	Arfgap1 (MGP_PahariEiJ_G0026240) #7	Nkain4 (MGP_PahariEiJ_G0026239) #8	Birc7 (MGP_PahariEiJ_G0026238) #9	Ythdf1 (MGP_PahariEiJ_G0026237) #10	Bhlhe23 (MGP_PahariEiJ_G0026236) #11	Slc17a9 (MGP_PahariEiJ_G0026235) #12	Gid8 (MGP_PahariEiJ_G0026234) #13	Dido1 (MGP_PahariEiJ_G0026233) #14	Tcfl5 (MGP_PahariEiJ_G0026232) #15	Col9a3 (MGP_PahariEiJ_G0026231) #16	Ogfr (MGP_PahariEiJ_G0026230) #17	Mrgbp (MGP_PahariEiJ_G0026229) #18	Ntsr1 (MGP_PahariEiJ_G0026228) #19	Slco4a1 (MGP_PahariEiJ_G0026227) #20	Gata5 (MGP_PahariEiJ_G0026226) #22	Rbbp8nl (MGP_PahariEiJ_G0026225) #23	Cables2 (MGP_PahariEiJ_G0026224) #24	Rps21 (MGP_PahariEiJ_G0026223) #25	Lama5 (MGP_PahariEiJ_G0026222) #26	MGP_PahariEiJ_G0026221 #27	MGP_PahariEiJ_G0026220 #27	Osbpl2 (MGP_PahariEiJ_G0026219) #28	Hrh3 (MGP_PahariEiJ_G0026218) #29	MGP_PahariEiJ_G0026217 #30	Ss18l1 (MGP_PahariEiJ_G0026216) #31	Psma7 (MGP_PahariEiJ_G0026215) #32	Lsm14b (MGP_PahariEiJ_G0026214) #33	MGP_PahariEiJ_G0026213 #34	Cdh4 (MGP_PahariEiJ_G0026212) #35	Cdh26 (MGP_PahariEiJ_G0026211)
Rat	MODERN SPECIES	13	Nkain4 (ENSRNOG00000031834) #8	Birc7 (ENSRNOG00000043311) #9	Ythdf1 (ENSRNOG00000027015) #10	Bhlhe23 (ENSRNOG00000010312) #11	Slc17a9 (ENSRNOG00000010275) #12	Gid8 (ENSRNOG00000065606) #13	Dido1 (ENSRNOG00000009936) #14	Tcfl5 (ENSRNOG00000061199) #15	Col9a3 (ENSRNOG00000009531) #16	Ogfr (ENSRNOG00000009355) #17	Mrgbp (ENSRNOG00000059891) #18	Ntsr1 (ENSRNOG00000028708) #19	ENSRNOG00000064180 #21	Slco4a1 (ENSRNOG00000053430) #20	AC115322.1 (ENSRNOG00000054405)	Gata5 (ENSRNOG00000058983) #22	Rbbp8nl (ENSRNOG00000057245) #23	Cables2 (ENSRNOG00000051420) #24	Rps21 (ENSRNOG00000060449) #25	Lama5 (ENSRNOG00000053691) #26	Adrm1 (ENSRNOG00000055984) #27	Osbpl2 (ENSRNOG00000057756) #28	Hrh3 (ENSRNOG00000061153) #29	Mtg2 (ENSRNOG00000059919) #30	Ss18l1 (ENSRNOG00000060010) #31	Psma7 (ENSRNOG00000056853) #32	Lsm14b (ENSRNOG00000054557) #33	Taf4 (ENSRNOG00000054497) #34	Cdh4 (ENSRNOG00000052405) #35	Cdh26 (ENSRNOG00000053332)	Ppp1r3d (ENSRNOG00000053869)
Lesser Egyptian jerboa	MODERN SPECIES	171	Arfgap1 (ENSJJAG00000015383) #7	Nkain4 (ENSJJAG00000014525) #8	Birc7 (ENSJJAG00000014210) #9	Ythdf1 (ENSJJAG00000013589) #10	Bhlhe23 (ENSJJAG00000013438) #11	ENSJJAG00000001169	Slc17a9 (ENSJJAG00000000563) #12	Gid8 (ENSJJAG00000000120) #13	Dido1 (ENSJJAG00000022740) #14	ENSJJAG00000022001 #15	Col9a3 (ENSJJAG00000020792) #16	Ogfr (ENSJJAG00000020054) #17	Mrgbp (ENSJJAG00000019784) #18	Ntsr1 (ENSJJAG00000019264) #19	Slco4a1 (ENSJJAG00000018715) #20	Gata5 (ENSJJAG00000018164) #22	Cables2 (ENSJJAG00000017409) #24	Rps21 (ENSJJAG00000016454) #25	Lama5 (ENSJJAG00000014033) #26	ENSJJAG00000011363 #27	Osbpl2 (ENSJJAG00000011104) #28	Hrh3 (ENSJJAG00000010764) #29	Mtg2 (ENSJJAG00000010435) #30	Ss18l1 (ENSJJAG00000009378) #31	ENSJJAG00000008311 #32	Lsm14b (ENSJJAG00000012728) #33	Taf4 (ENSJJAG00000011875) #34	Cdh4 (ENSJJAG00000010912) #35	Cdh26 (ENSJJAG00000007415)	Fam217b (ENSJJAG00000004859) #37	ENSJJAG00000002434
Kangaroo rat	MODERN SPECIES	448	Kcnq2 (ENSDORG00000011128)	Chrna4 (ENSDORG00000023973)	ENSDORG00000015431	Arfgap1 (ENSDORG00000010660) #7	Nkain4 (ENSDORG00000001799) #8	Birc7 (ENSDORG00000025467) #9	Ythdf1 (ENSDORG00000002879) #10	Gid8 (ENSDORG00000003411) #13	ENSDORG00000011113 #14	Tcfl5 (ENSDORG00000004511) #15	Col9a3 (ENSDORG00000004509) #16	ENSDORG00000030204 #17	ENSDORG00000027453 #18	Ntsr1 (ENSDORG00000025445) #19	Slco4a1 (ENSDORG00000001161) #20	ENSDORG00000026178 #22	Rbbp8nl (ENSDORG00000007635) #23	ENSDORG00000025770 #24	Rps21 (ENSDORG00000007632) ##25	Lama5 (ENSDORG00000016589) #26	ENSDORG00000016587 #27	Osbpl2 (ENSDORG00000016585) #28	Hrh3 (ENSDORG00000003326) #29	Mtg2 (ENSDORG00000003325) #30	Ss18l1 (ENSDORG00000003324) #31	Psma7 (ENSDORG00000016684) #32	Lsm14b (ENSDORG00000016683) #33	Taf4 (ENSDORG00000006800) #34	Cdh4 (ENSDORG00000000209) #35
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00940000163709	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.o.b.i.b #25	ENSGT00390000017515.o.b.j #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00940000159329	ENSGT00940000163709	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000161921
Marmotini	ANCESTRAL SPECIES	5	ENSGT00940000159329	ENSGT00940000163709	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379.a #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000161921
Marmotini_b	ANCESTRAL SPECIES	25	ENSGT00940000159329	ENSGT00940000163709	ENSGT00890000139515 #7	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379.a #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000161921
Arctic ground squirrel	MODERN SPECIES	372					YTHDF1 (ENSUPAG00010009771) #10	BHLHE23 (ENSUPAG00010009763) #11	SLC17A9 (ENSUPAG00010009742) #12	GID8 (ENSUPAG00010009732) #13	DIDO1 (ENSUPAG00010009662) #14	TCFL5 (ENSUPAG00010009652) #15	ENSUPAG00010009608 #16	OGFR (ENSUPAG00010009496) #17	MRGBP (ENSUPAG00010009485) #18	NTSR1 (ENSUPAG00010009468) #19	SLCO4A1 (ENSUPAG00010009439) #20	GATA5 (ENSUPAG00010009409) #22	RBBP8NL (ENSUPAG00010009390) #23	CABLES2 (ENSUPAG00010009371) #24	ENSUPAG00010009364 ##25	ADRM1 (ENSUPAG00010008614) #27	OSBPL2 (ENSUPAG00010008572) #28	HRH3 (ENSUPAG00010008523) #29	MTG2 (ENSUPAG00010008487) #30	SS18L1 (ENSUPAG00010008474) #31	PSMA7 (ENSUPAG00010008463) #32	LSM14B (ENSUPAG00010008440) #33	TAF4 (ENSUPAG00010008419) #34	CDH4 (ENSUPAG00010008395) #35
Squirrel	MODERN SPECIES	114	CHRNA4 (ENSSTOG00000028017)	COL20A1 (ENSSTOG00000014595)	ARFGAP1 (ENSSTOG00000022151) #7	BIRC7 (ENSSTOG00000034074) #9	YTHDF1 (ENSSTOG00000023001) #10	ENSSTOG00000030778 #11	SLC17A9 (ENSSTOG00000008798) #12	GID8 (ENSSTOG00000025077) #13	DIDO1 (ENSSTOG00000012318) #14	TCFL5 (ENSSTOG00000026350) #15	ENSSTOG00000021578 #16	ENSSTOG00000020474 #17	MRGBP (ENSSTOG00000012953) #18	NTSR1 (ENSSTOG00000026120) #19	SLCO4A1 (ENSSTOG00000019826) #20	GATA5 (ENSSTOG00000010454) #22	RBBP8NL (ENSSTOG00000024557) #23	CABLES2 (ENSSTOG00000001031) #24	RPS21 (ENSSTOG00000001029) ##25	LAMA5 (ENSSTOG00000026668) #26	ADRM1 (ENSSTOG00000002691) #27	OSBPL2 (ENSSTOG00000011355) #28	HRH3 (ENSSTOG00000021350) #29	MTG2 (ENSSTOG00000024521) #30	SS18L1 (ENSSTOG00000022485) #31	PSMA7 (ENSSTOG00000012489) #32	LSM14B (ENSSTOG00000020482) #33	TAF4 (ENSSTOG00000014768) #34	CDH4 (ENSSTOG00000024476) #35	FAM217B (ENSSTOG00000028925) #37	PPP1R3D (ENSSTOG00000027059)
Alpin marmot	MODERN SPECIES		KCNQ2 (ENSMMMG00000002019)	CHRNA4 (ENSMMMG00000002798)	COL20A1 (ENSMMMG00000002849)	ARFGAP1 (ENSMMMG00000003181) #7	BIRC7 (ENSMMMG00000003407) #9	YTHDF1 (ENSMMMG00000003425) #10	SLC17A9 (ENSMMMG00000003461) #12	GID8 (ENSMMMG00000003488) #13	DIDO1 (ENSMMMG00000003510) #14	TCFL5 (ENSMMMG00000003663) #15	ENSMMMG00000003673 #16	OGFR (ENSMMMG00000003753) #17	MRGBP (ENSMMMG00000003862) #18	NTSR1 (ENSMMMG00000003907) #19	SLCO4A1 (ENSMMMG00000003911) #20	GATA5 (ENSMMMG00000003966) #22	RBBP8NL (ENSMMMG00000004035) #23	CABLES2 (ENSMMMG00000004085) #24	RPS21 (ENSMMMG00000004100) ##25	ADRM1 (ENSMMMG00000004549) #27	OSBPL2 (ENSMMMG00000004561) #28	HRH3 (ENSMMMG00000004618) #29	ENSMMMG00000004646 #30	SS18L1 (ENSMMMG00000004657) #31	ENSMMMG00000004668 #32	LSM14B (ENSMMMG00000004672) #33	ENSMMMG00000004719 #34	CDH4 (ENSMMMG00000004760) #35	FAM217B (ENSMMMG00000004800) #37	PPP1R3D (ENSMMMG00000004802)	ENSMMMG00000004806
Eurasian red squirrel	MODERN SPECIES	11	CHRNA4 (ENSSVLG00005004453)	ENSSVLG00005004184	ARFGAP1 (ENSSVLG00005003989) #7	BIRC7 (ENSSVLG00005003913) #9	YTHDF1 (ENSSVLG00005003892) #10	BHLHE23 (ENSSVLG00005003872) #11	SLC17A9 (ENSSVLG00005003839) #12	GID8 (ENSSVLG00005003819) #13	ENSSVLG00005003753 #14	TCFL5 (ENSSVLG00005003713) #15	COL9A3 (ENSSVLG00005003650)	ENSSVLG00005003605 #17	MRGBP (ENSSVLG00005003577) #18	NTSR1 (ENSSVLG00005003558) #19	SLCO4A1 (ENSSVLG00005003525) #20	GATA5 (ENSSVLG00005003441) #22	RBBP8NL (ENSSVLG00005003383) #23	CABLES2 (ENSSVLG00005003344) #24	ENSSVLG00005003318 #25	ENSSVLG00005003084 #27	OSBPL2 (ENSSVLG00005003034) #28	HRH3 (ENSSVLG00005003009) #29	ENSSVLG00005002984 #30	SS18L1 (ENSSVLG00005002951) #31	ENSSVLG00005002918 #32	LSM14B (ENSSVLG00005002868) #33	TAF4 (ENSSVLG00005002767) #34	CDH4 (ENSSVLG00005002684) #35	ENSSVLG00005002662 #37	PPP1R3D (ENSSVLG00005002650)	ENSSVLG00005002613
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000159329	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b.i #24	ENSGT00390000017515.o.b.i.b #25	ENSGT00400000022086.b.b.j #24	ENSGT00390000017515.o.b.j #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000042444	PPDPF (ENSHGLG00000014857)	EEF1A2 (ENSHGLG00000014996)	ENSHGLG00000016521	ARFGAP1 (ENSHGLG00000008445) #7	ENSHGLG00000041458	YTHDF1 (ENSHGLG00000006585) #10	BHLHE23 (ENSHGLG00000020693) #11	GID8 (ENSHGLG00000013122) #13	ENSHGLG00000014809 #14	TCFL5 (ENSHGLG00000011606) #15	ENSHGLG00000005944 #16	ENSHGLG00000046607 #17	MRGBP (ENSHGLG00000042672) #18	NTSR1 (ENSHGLG00000037154) #19	ENSHGLG00000006232 #22	ENSHGLG00000040253 #22	ENSHGLG00000044047 #24	RPS21 (ENSHGLG00000040061) #25	ADRM1 (ENSHGLG00000005649) #27	OSBPL2 (ENSHGLG00000015027) #28	ENSHGLG00000046738 #29	ENSHGLG00000049601 #30	SS18L1 (ENSHGLG00000006752) #31	ENSHGLG00000013634 #32	LSM14B (ENSHGLG00000015055) #33	ENSHGLG00000038944 #35	PPP1R3D (ENSHGLG00000033683)	EDN3 (ENSHGLG00000018677)	ZNF831 (ENSHGLG00000010468)	ENSHGLG00000009253
Naked mole-rat female	MODERN SPECIES	6	PPDPF (ENSHGLG00000014857)	EEF1A2 (ENSHGLG00000014996)	ENSHGLG00000016521	ARFGAP1 (ENSHGLG00000008445) #7	ENSHGLG00000041458	YTHDF1 (ENSHGLG00000006585) #10	BHLHE23 (ENSHGLG00000020693) #11	GID8 (ENSHGLG00000013122) #13	ENSHGLG00000014809 #14	TCFL5 (ENSHGLG00000011606) #15	ENSHGLG00000005944 #16	ENSHGLG00000046607 #17	MRGBP (ENSHGLG00000042672) #18	NTSR1 (ENSHGLG00000037154) #19	ENSHGLG00000006232 #22	ENSHGLG00000040253 #22	ENSHGLG00000044047 #24	RPS21 (ENSHGLG00000040061) #25	ADRM1 (ENSHGLG00000005649) #27	OSBPL2 (ENSHGLG00000015027) #28	ENSHGLG00000046738 #29	ENSHGLG00000049601 #30	SS18L1 (ENSHGLG00000006752) #31	ENSHGLG00000013634 #32	LSM14B (ENSHGLG00000015055) #33	ENSHGLG00000038944 #35	PPP1R3D (ENSHGLG00000033683)	EDN3 (ENSHGLG00000018677)	ZNF831 (ENSHGLG00000010468)	ENSHGLG00000009253	ENSHGLG00000008231
Hystricomorpha_a	ANCESTRAL SPECIES	66	ENSGT00940000159329	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b.i #24	ENSGT00390000017515.o.b.i.b #25	ENSGT00390000017515.o.b.j #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37
Hystricomorpha_b	ANCESTRAL SPECIES	83	ENSGT00940000159329	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b.i #24	ENSGT00390000017515.o.b.i.b #25	ENSGT00390000017515.o.b.j #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37
Long-tailed chinchilla	MODERN SPECIES	235	ENSCLAG00000002569	ARFGAP1 (ENSCLAG00000003171) #7	NKAIN4 (ENSCLAG00000003530) #8	BIRC7 (ENSCLAG00000003588) #9	YTHDF1 (ENSCLAG00000005989) #10	SLC17A9 (ENSCLAG00000006378) #12	GID8 (ENSCLAG00000006562) #13	DIDO1 (ENSCLAG00000006615) #14	ENSCLAG00000007594 #15	ENSCLAG00000007710 #16	OGFR (ENSCLAG00000008130) #17	ENSCLAG00000002627 #18	NTSR1 (ENSCLAG00000002645) #19	SLCO4A1 (ENSCLAG00000007190) #20	CABLES2 (ENSCLAG00000007291) #24	GATA5 (ENSCLAG00000007559) #22	RBBP8NL (ENSCLAG00000006833) #23	RPS21 (ENSCLAG00000007566) #25	LAMA5 (ENSCLAG00000009241) #26	ADRM1 (ENSCLAG00000005222) #27	OSBPL2 (ENSCLAG00000005408) #28	HRH3 (ENSCLAG00000005909) #29	MTG2 (ENSCLAG00000002886) #30	SS18L1 (ENSCLAG00000003078) #31	PSMA7 (ENSCLAG00000003150) #32	LSM14B (ENSCLAG00000003186) #33	TAF4 (ENSCLAG00000003706) #34	CDH4 (ENSCLAG00000003861) #35	SYCP2 (ENSCLAG00000004302)	PHACTR3 (ENSCLAG00000002652)
Degu	MODERN SPECIES	235	ENSODEG00000004143	ARFGAP1 (ENSODEG00000004250) #7	NKAIN4 (ENSODEG00000004313) #8	BIRC7 (ENSODEG00000004350) #9	ENSODEG00000004380 #10	SLC17A9 (ENSODEG00000004413) #12	ENSODEG00000004429 #13	DIDO1 (ENSODEG00000004463) #14	TCFL5 (ENSODEG00000004537) #15	ENSODEG00000004560	ENSODEG00000004588 #16	OGFR (ENSODEG00000004656) #17	MRGBP (ENSODEG00000004674) #18	NTSR1 (ENSODEG00000004689) #19	SLCO4A1 (ENSODEG00000004720) #20	GATA5 (ENSODEG00000003615) #22	RBBP8NL (ENSODEG00000003634) #23	CABLES2 (ENSODEG00000003674) #24	ENSODEG00000003715 #25	LAMA5 (ENSODEG00000003782) #26	ADRM1 (ENSODEG00000003910) #27	OSBPL2 (ENSODEG00000003927) #28	HRH3 (ENSODEG00000003961) #29	MTG2 (ENSODEG00000004006) #30	SS18L1 (ENSODEG00000004038) #31	PSMA7 (ENSODEG00000004073) #32	LSM14B (ENSODEG00000004099) #33	TAF4 (ENSODEG00000004136) #34	CDH4 (ENSODEG00000004169) #35	FAM217B (ENSODEG00000004205) #37	PPP1R3D (ENSODEG00000004216)
Guinea pig	MODERN SPECIES	119	CHRNA4 (ENSCPOG00000010559)	ENSCPOG00000021624	ARFGAP1 (ENSCPOG00000025055) #7	NKAIN4 (ENSCPOG00000005586) #8	BIRC7 (ENSCPOG00000020366) #9	YTHDF1 (ENSCPOG00000010202) #10	SLC17A9 (ENSCPOG00000001082) #12	GID8 (ENSCPOG00000007888) #13	DIDO1 (ENSCPOG00000004884) #14	TCFL5 (ENSCPOG00000020307) #15	ENSCPOG00000002720 #16	OGFR (ENSCPOG00000003143) #17	MRGBP (ENSCPOG00000020272) #18	NTSR1 (ENSCPOG00000033878) #19	SLCO4A1 (ENSCPOG00000015749) #20	GATA5 (ENSCPOG00000030979) #22	RBBP8NL (ENSCPOG00000030864) #23	CABLES2 (ENSCPOG00000001967) #24	RPS21 (ENSCPOG00000001965) #25	LAMA5 (ENSCPOG00000009593) #26	ADRM1 (ENSCPOG00000009588) #27	OSBPL2 (ENSCPOG00000006907) #28	HRH3 (ENSCPOG00000007127) #29	MTG2 (ENSCPOG00000023202) #30	SS18L1 (ENSCPOG00000002513) #31	PSMA7 (ENSCPOG00000014168) #32	LSM14B (ENSCPOG00000038080) #33	TAF4 (ENSCPOG00000030707) #34	CDH4 (ENSCPOG00000005520) #35	FAM217B (ENSCPOG00000032600) #37	ENSCPOG00000009549
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000160139 #22
Pika	MODERN SPECIES	1058																GATA5 (ENSOPRG00000013119) #22
Tree shrew	MODERN SPECIES	1337																ENSTBEG00000006150 #22
Atlantogenata	ANCESTRAL SPECIES	78	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537.e #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35
Afrotheria	ANCESTRAL SPECIES	86	ENSGT00940000159329	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537.e #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35
Afrotheria_a	ANCESTRAL SPECIES	88	ENSGT00940000159329	ENSGT00940000153769.G	ENSGT00890000139515 #7	ENSGT00940000157989.b #8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537.e #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35
Hyrax	MODERN SPECIES	10115																GATA5 (ENSPCAG00000000112) #22
Elephant	MODERN SPECIES	52	CHRNA4 (ENSLAFG00000005402)	ENSLAFG00000027493	ARFGAP1 (ENSLAFG00000015786) #7	NKAIN4 (ENSLAFG00000013477) #8	BIRC7 (ENSLAFG00000031254) #9	YTHDF1 (ENSLAFG00000008884) #10	ENSLAFG00000002108 #12	GID8 (ENSLAFG00000014167) #13	DIDO1 (ENSLAFG00000005671) #14	TCFL5 (ENSLAFG00000014903) #15	ENSLAFG00000010016 #16	ENSLAFG00000022322 #17	MRGBP (ENSLAFG00000018296) #18	NTSR1 (ENSLAFG00000008862) #19	SLCO4A1 (ENSLAFG00000007102) #20	GATA5 (ENSLAFG00000002741) #22	RBBP8NL (ENSLAFG00000029543) #23	CABLES2 (ENSLAFG00000023040) #24	RPS21 (ENSLAFG00000015793) ##25	ENSLAFG00000028993 #26	ADRM1 (ENSLAFG00000003207) #27	OSBPL2 (ENSLAFG00000009506) #28	HRH3 (ENSLAFG00000021662) #29	MTG2 (ENSLAFG00000011420) #30	ENSLAFG00000031634 #31	PSMA7 (ENSLAFG00000030070) #32	LSM14B (ENSLAFG00000007492) #33	TAF4 (ENSLAFG00000001807) #34	CDH4 (ENSLAFG00000008770) #35
Tenrec	MODERN SPECIES	2672																GATA5 (ENSETEG00000019185) #22
Xenarthra	ANCESTRAL SPECIES	1361															ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00400000022086.b.b #24
Armadillo	MODERN SPECIES	1416															SLCO4A1 (ENSDNOG00000048368) #20	GATA5 (ENSDNOG00000044134) #22	ENSDNOG00000039564 #24
Marsupialia	ANCESTRAL SPECIES	15	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b.a #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a.q #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b.a #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a.q #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b.a #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532.b #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT00390000014718 #21	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a.q #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b.a #34	ENSGT00990000204247	ENSGT00940000158073 #35	ENSGT00940000161589
koala	MODERN SPECIES	11	ENSPCIG00000017168 #9	YTHDF1 (ENSPCIG00000017170) #10	BHLHE23 (ENSPCIG00000017180) #11	SLC17A9 (ENSPCIG00000017181) #12	GID8 (ENSPCIG00000017182) #13	ENSPCIG00000017185 #14	ENSPCIG00000036461 #14	ENSPCIG00000017186 #15	ENSPCIG00000037454 #15	ENSPCIG00000017187 #16	ENSPCIG00000017189 #17	MRGBP (ENSPCIG00000017191) #18	NTSR1 (ENSPCIG00000017192) #19	ENSPCIG00000009708 #21	SLCO4A1 (ENSPCIG00000009707) #20	GATA5 (ENSPCIG00000013193) #22	ENSPCIG00000013194 #23	CABLES2 (ENSPCIG00000013195) #24	ENSPCIG00000013196 ##25	LAMA5 (ENSPCIG00000013197) #26	ADRM1 (ENSPCIG00000013388) #27	OSBPL2 (ENSPCIG00000013390) #28	HRH3 (ENSPCIG00000037430) #29	MTG2 (ENSPCIG00000013399) #30	SS18L1 (ENSPCIG00000013402) #31	PSMA7 (ENSPCIG00000013403) #32	LSM14B (ENSPCIG00000013405) #33	ENSPCIG00000013407 #34	ENSPCIG00000029897	CDH4 (ENSPCIG00000013421) #35	ENSPCIG00000005030
Common wonbat	MODERN SPECIES	35	ENSVURG00010016978	ENSVURG00010017017 #7	ENSVURG00010017663 ##8	ENSVURG00010017671 #9	YTHDF1 (ENSVURG00010017681) #10	BHLHE23 (ENSVURG00010017694) #11	SLC17A9 (ENSVURG00010017698) #12	GID8 (ENSVURG00010017708) #13	ENSVURG00010017716 #14	ENSVURG00010017730 #15	ENSVURG00010017735 #17	MRGBP (ENSVURG00010017741) #18	NTSR1 (ENSVURG00010017743) #19	SLCO4A1 (ENSVURG00010017751) #20	ENSVURG00010017753	GATA5 (ENSVURG00010017761) #22	ENSVURG00010017765 #23	ENSVURG00010017777 ##25	ENSVURG00010017789 #24	LAMA5 (ENSVURG00010017852) #26	ADRM1 (ENSVURG00010018150) #27	OSBPL2 (ENSVURG00010018163) #28	ENSVURG00010018174	HRH3 (ENSVURG00010018176) #29	MTG2 (ENSVURG00010018180) #30	SS18L1 (ENSVURG00010018186) #31	PSMA7 (ENSVURG00010018194) #32	LSM14B (ENSVURG00010018211) #33	TAF4 (ENSVURG00010018221) #34	ENSVURG00010018232	CDH4 (ENSVURG00010018245) #35
Wallaby	MODERN SPECIES	3623																ENSMEUG00000010443 #22
Tasmanian devil	MODERN SPECIES	1	KCNQ2 (ENSSHAG00000000392)	CHRNA4 (ENSSHAG00000005283)	ENSSHAG00000008158	ARFGAP1 (ENSSHAG00000008569) #7	NKAIN4 (ENSSHAG00000009407) ##8	ENSSHAG00000010237 #9	YTHDF1 (ENSSHAG00000010430) #10	BHLHE23 (ENSSHAG00000008128) #11	SLC17A9 (ENSSHAG00000008884) #12	DIDO1 (ENSSHAG00000009621) #14	TCFL5 (ENSSHAG00000009928) #15	ENSSHAG00000025084 #16	ENSSHAG00000010685 #17	NTSR1 (ENSSHAG00000025949) #19	SLCO4A1 (ENSSHAG00000007017) #20	GATA5 (ENSSHAG00000012125) #22	ENSSHAG00000013047 #23	CABLES2 (ENSSHAG00000029271) #24	ENSSHAG00000028487 ##25	ENSSHAG00000014512 #28	HRH3 (ENSSHAG00000030195) #29	ENSSHAG00000015339 #31	PSMA7 (ENSSHAG00000021848) #32	LSM14B (ENSSHAG00000022375) #33	TAF4 (ENSSHAG00000030211) #34	ENSSHAG00000030481	CDH4 (ENSSHAG00000016271) #35	CDH26 (ENSSHAG00000004232)	ENSSHAG00000026572 #37	PPP1R3D (ENSSHAG00000028027)	SYCP2 (ENSSHAG00000005477)
Opossum	MODERN SPECIES		ARFGAP1 (ENSMODG00000016848) #7	ENSMODG00000016845 ##8	ENSMODG00000016844 #9	YTHDF1 (ENSMODG00000016842) #10	BHLHE23 (ENSMODG00000023267) #11	SLC17A9 (ENSMODG00000016838) #12	GID8 (ENSMODG00000016835) #13	DIDO1 (ENSMODG00000016832) #14	TCFL5 (ENSMODG00000016827) #15	ENSMODG00000016823 #16	ENSMODG00000043896 #17	ENSMODG00000016803 #18	NTSR1 (ENSMODG00000016798) #19	SLCO4A1 (ENSMODG00000016783) #20	ENSMODG00000047181	GATA5 (ENSMODG00000016774) #22	ENSMODG00000023265 #23	CABLES2 (ENSMODG00000023264) #24	ENSMODG00000016769 ##25	LAMA5 (ENSMODG00000016753) #26	ADRM1 (ENSMODG00000016715) #27	OSBPL2 (ENSMODG00000016709) #28	HRH3 (ENSMODG00000016705) #29	MTG2 (ENSMODG00000016699) #30	SS18L1 (ENSMODG00000016697) #31	ENSMODG00000016692 #32	LSM14B (ENSMODG00000016690) #33	ENSMODG00000045678	ENSMODG00000016684 #34	CDH4 (ENSMODG00000016675) #35	ENSMODG00000043435
Platypus	MODERN SPECIES	19	ENSOANG00000003728	ENSOANG00000003727	ARFGAP1 (ENSOANG00000045856) #7	ENSOANG00000003724 ##8	ENSOANG00000031992 #9	YTHDF1 (ENSOANG00000003723) #10	SLC17A9 (ENSOANG00000004970) #12	GID8 (ENSOANG00000004972) #13	ENSOANG00000004973 #14	TCFL5 (ENSOANG00000004974) #15	ENSOANG00000051322 #16	ENSOANG00000004976 #17	MRGBP (ENSOANG00000050356) #18	NTSR1 (ENSOANG00000004978) #19	SLCO4A1 (ENSOANG00000004979) #20	GATA5 (ENSOANG00000004981) #22	ENSOANG00000038125 #24	ENSOANG00000003361 ##25	LAMA5 (ENSOANG00000003362) #26	ADRM1 (ENSOANG00000003363) #27	OSBPL2 (ENSOANG00000036569) #28	HRH3 (ENSOANG00000037021) #29	MTG2 (ENSOANG00000046024) #30	SS18L1 (ENSOANG00000003368) #31	PSMA7 (ENSOANG00000003369) #32	LSM14B (ENSOANG00000003370) #33	TAF4 (ENSOANG00000003371) #34	CDH4 (ENSOANG00000003373) #35	ENSOANG00000009286 #37	PPP1R3D (ENSOANG00000038878)	ENSOANG00000009282
Sauria	ANCESTRAL SPECIES	16	ENSGT00940000180601	ENSGT00940000164164	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01020000230601	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Archelosauria	ANCESTRAL SPECIES		ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Cryptodira	ANCESTRAL SPECIES	26	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Testudinoidea	ANCESTRAL SPECIES	25	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Testudinidae	ANCESTRAL SPECIES	28	ENSGT00940000153769.G	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37	ENSGT00940000161921
Goode s thornscrub tortoise	MODERN SPECIES	5	ENSGEVG00005006261	ARFGAP1 (ENSGEVG00005006291) #7	ENSGEVG00005006342 ##8	BIRC7 (ENSGEVG00005006406) #9	YTHDF1 (ENSGEVG00005006447) #10	BHLHE23 (ENSGEVG00005006472) #11	SLC17A9 (ENSGEVG00005006485) #12	GID8 (ENSGEVG00005006543) #13	DIDO1 (ENSGEVG00005006576) #14	TCFL5 (ENSGEVG00005006612) #15	OGFR (ENSGEVG00005006667) #17	MRGBP (ENSGEVG00005006691) #18	NTSR1 (ENSGEVG00005006730) #19	SLCO4A1 (ENSGEVG00005006781) #20	ENSGEVG00005006884	GATA5 (ENSGEVG00005006923) #22	CABLES2 (ENSGEVG00005006972) #24	RPS21 (ENSGEVG00005007045) ##25	LAMA5 (ENSGEVG00005007203) #26	ADRM1 (ENSGEVG00005007944) #27	OSBPL2 (ENSGEVG00005007990) #28	HRH3 (ENSGEVG00005008097) #29	MTG2 (ENSGEVG00005008248) #30	SS18L1 (ENSGEVG00005008266) #31	PSMA7 (ENSGEVG00005008318) #32	LSM14B (ENSGEVG00005008338) #33	TAF4 (ENSGEVG00005008424) #34	CDH4 (ENSGEVG00005008691) #35	CDH26 (ENSGEVG00005008809)	FAM217B (ENSGEVG00005008881) #37	PPP1R3D (ENSGEVG00005008930)
Abingdon island giant tortoise	MODERN SPECIES	2211												ENSCABG00000004407 #17	MRGBP (ENSCABG00000004395) #18	NTSR1 (ENSCABG00000004391) #19	SLCO4A1 (ENSCABG00000004384) #20	GATA5 (ENSCABG00000004377) #22	CABLES2 (ENSCABG00000004375) #24	RPS21 (ENSCABG00000004374) ##25	ENSCABG00000004369 #26	ADRM1 (ENSCABG00000004366) #27	OSBPL2 (ENSCABG00000004242) #28	HRH3 (ENSCABG00000004142) #29	MTG2 (ENSCABG00000004040) #30	ENSCABG00000004025 #31	PSMA7 (ENSCABG00000004021) #32	LSM14B (ENSCABG00000004016) #33	TAF4 (ENSCABG00000004009) #34	CDH4 (ENSCABG00000003998) #35
Emydidae	ANCESTRAL SPECIES	31	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000164405.f	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Three-toed box turtle	MODERN SPECIES	60	ENSTMTG00000001502	ARFGAP1 (ENSTMTG00000001592) #7	ENSTMTG00000001608 ##8	BIRC7 (ENSTMTG00000001619) #9	YTHDF1 (ENSTMTG00000001634) #10	BHLHE23 (ENSTMTG00000001651) #11	ENSTMTG00000001654	SLC17A9 (ENSTMTG00000001662) #12	GID8 (ENSTMTG00000001679) #13	DIDO1 (ENSTMTG00000001693) #14	TCFL5 (ENSTMTG00000001714) #15	OGFR (ENSTMTG00000001726) #17	MRGBP (ENSTMTG00000001733) #18	NTSR1 (ENSTMTG00000001739) #19	SLCO4A1 (ENSTMTG00000001763) #20	GATA5 (ENSTMTG00000001881) #22	CABLES2 (ENSTMTG00000001905) #24	RPS21 (ENSTMTG00000001966) ##25	LAMA5 (ENSTMTG00000002020) #26	ADRM1 (ENSTMTG00000002296) #27	OSBPL2 (ENSTMTG00000002303) #28	HRH3 (ENSTMTG00000002329) #29	MTG2 (ENSTMTG00000002360) #30	SS18L1 (ENSTMTG00000002365) #31	PSMA7 (ENSTMTG00000002377) #32	LSM14B (ENSTMTG00000002386) #33	TAF4 (ENSTMTG00000002398) #34	CDH4 (ENSTMTG00000002415) #35	CDH26 (ENSTMTG00000002435)	FAM217B (ENSTMTG00000002444) #37	ENSTMTG00000002448
painted turtle	MODERN SPECIES	2365	BIRC7 (ENSCPBG00000027185) #9	YTHDF1 (ENSCPBG00000027183) #10	BHLHE23 (ENSCPBG00000027173) #11	ENSCPBG00000027172	SLC17A9 (ENSCPBG00000027170) #12	GID8 (ENSCPBG00000027168) #13	DIDO1 (ENSCPBG00000027166) #14	TCFL5 (ENSCPBG00000027164) #15	ENSCPBG00000027162 #16	OGFR (ENSCPBG00000027160) #17	MRGBP (ENSCPBG00000027159) #18	NTSR1 (ENSCPBG00000027157) #19	ENSCPBG00000027156	ENSCPBG00000027155	SLCO4A1 (ENSCPBG00000027154) #20	GATA5 (ENSCPBG00000027143) #22	RBBP8NL (ENSCPBG00000027139) #23	CABLES2 (ENSCPBG00000027134) #24	RPS21 (ENSCPBG00000027132) ##25	LAMA5 (ENSCPBG00000027113) #26	ADRM1 (ENSCPBG00000027092) #27	OSBPL2 (ENSCPBG00000027086) #28	HRH3 (ENSCPBG00000027081) #29	MTG2 (ENSCPBG00000027075) #30	SS18L1 (ENSCPBG00000027069) #31	PSMA7 (ENSCPBG00000027066) #32	LSM14B (ENSCPBG00000027065) #33	TAF4 (ENSCPBG00000027063) #34	ENSCPBG00000027060	CDH4 (ENSCPBG00000027058) #35	CDH26 (ENSCPBG00000027050)
Chinese turtle	MODERN SPECIES	1282					DHX35 (ENSPSIG00000005552)	YTHDF1 (ENSPSIG00000005529) #10	SLC17A9 (ENSPSIG00000005292) #12	GID8 (ENSPSIG00000005271) #13	DIDO1 (ENSPSIG00000005191) #14	TCFL5 (ENSPSIG00000005171) #15	COL9A3 (ENSPSIG00000004702)	OGFR (ENSPSIG00000004673) #17	MRGBP (ENSPSIG00000004671) #18	NTSR1 (ENSPSIG00000004655) #19	SLCO4A1 (ENSPSIG00000004478) #20	GATA5 (ENSPSIG00000004394) #22	RBBP8NL (ENSPSIG00000004354) #23	CABLES2 (ENSPSIG00000004339) #24	RPS21 (ENSPSIG00000004333) ##25	LAMA5 (ENSPSIG00000003797) #26	ADRM1 (ENSPSIG00000003713) #27	OSBPL2 (ENSPSIG00000003694) #28	HRH3 (ENSPSIG00000003664) #29	MTG2 (ENSPSIG00000003651) #30	SS18L1 (ENSPSIG00000016427) #31	PSMA7 (ENSPSIG00000016150) #32	LSM14B (ENSPSIG00000014762) #33	TAF4 (ENSPSIG00000013059) #34	CDH4 (ENSPSIG00000009585) #35	ENSPSIG00000000044	CDH26 (ENSPSIG00000007630)
Archosauria	ANCESTRAL SPECIES	13	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Aves	ANCESTRAL SPECIES	16	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Neognathae	ANCESTRAL SPECIES	16	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Neognathae_b	ANCESTRAL SPECIES	17	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01020000230601	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Neognathae_c	ANCESTRAL SPECIES	20	ENSGT00940000153769.G	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37	ENSGT00940000161921
Golden eagle	MODERN SPECIES	19	COL20A1 (ENSACCG00020001583)	ENSACCG00020001634	ARFGAP1 (ENSACCG00020001667) #7	NKAIN4 (ENSACCG00020001746) ##8	ENSACCG00020001773	YTHDF1 (ENSACCG00020001782) #10	BHLHE23 (ENSACCG00020001799) #11	SLC17A9 (ENSACCG00020001822) #12	GID8 (ENSACCG00020001847) #13	DIDO1 (ENSACCG00020001862) #14	TCFL5 (ENSACCG00020001900) #15	OGFR (ENSACCG00020001936) #17	MRGBP (ENSACCG00020001964) #18	NTSR1 (ENSACCG00020001989) #19	SLCO4A1 (ENSACCG00020002023) #20	GATA5 (ENSACCG00020002058) #22	CABLES2 (ENSACCG00020002089) #24	RPS21 (ENSACCG00020002111) ##25	LAMA5 (ENSACCG00020002277) #26	ADRM1 (ENSACCG00020002454) #27	OSBPL2 (ENSACCG00020002481) #28	HRH3 (ENSACCG00020002540) #29	MTG2 (ENSACCG00020002568) #30	SS18L1 (ENSACCG00020002584) #31	PSMA7 (ENSACCG00020002600) #32	LSM14B (ENSACCG00020002620) #33	TAF4 (ENSACCG00020002670) #34	CDH4 (ENSACCG00020003105) #35	CDH26 (ENSACCG00020003451)	FAM217B (ENSACCG00020003465) #37	PPP1R3D (ENSACCG00020003480)
Kakapo	MODERN SPECIES	5	ENSSHBG00005010860	ARFGAP1 (ENSSHBG00005010826) #7	ENSSHBG00005010765 ##8	BIRC7 (ENSSHBG00005010714) #9	YTHDF1 (ENSSHBG00005010688) #10	BHLHE23 (ENSSHBG00005010567) #11	SLC17A9 (ENSSHBG00005010502) #12	GID8 (ENSSHBG00005000701) #13	DIDO1 (ENSSHBG00005017886) #14	ENSSHBG00005017876 #15	ENSSHBG00005017865 #15	OGFR (ENSSHBG00005017855) #17	MRGBP (ENSSHBG00005017850) #18	NTSR1 (ENSSHBG00005017846) #19	SLCO4A1 (ENSSHBG00005017837) #20	GATA5 (ENSSHBG00005017822) #22	CABLES2 (ENSSHBG00005017818) #24	RPS21 (ENSSHBG00005017812) ##25	LAMA5 (ENSSHBG00005017731) #26	ADRM1 (ENSSHBG00005017710) #27	OSBPL2 (ENSSHBG00005017699) #28	HRH3 (ENSSHBG00005017696) #29	MTG2 (ENSSHBG00005017692) #30	SS18L1 (ENSSHBG00005017686) #31	PSMA7 (ENSSHBG00005017680) #32	LSM14B (ENSSHBG00005017664) #33	TAF4 (ENSSHBG00005017650) #34	ENSSHBG00005017632	CPNE1 (ENSSHBG00005017622)	RBM12 (ENSSHBG00005017618)	NFS1 (ENSSHBG00005017616)
Passeriformes	ANCESTRAL SPECIES	19	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01020000230601	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Passeriformes_d	ANCESTRAL SPECIES	19	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01020000230601	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Passeriformes_g	ANCESTRAL SPECIES	19	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01020000230601	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000161921
Passeroidea	ANCESTRAL SPECIES	18	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00390000014718 #21	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000161921
Zebra finch	MODERN SPECIES	13	ARFGAP1 (ENSTGUG00000007518) #7	NKAIN4 (ENSTGUG00000007547) ##8	BIRC7 (ENSTGUG00000007560) #9	YTHDF1 (ENSTGUG00000007565) #10	BHLHE23 (ENSTGUG00000007576) #11	SLC17A9 (ENSTGUG00000007577) #12	GID8 (ENSTGUG00000027933) #13	DIDO1 (ENSTGUG00000007595) #14	TCFL5 (ENSTGUG00000022221) #15	COL9A3 (ENSTGUG00000007624)	OGFR (ENSTGUG00000022732) #17	MRGBP (ENSTGUG00000007684) #18	NTSR1 (ENSTGUG00000029344) #19	SLCO4A1 (ENSTGUG00000007700) #20	ENSTGUG00000024863 #21	GATA5 (ENSTGUG00000007723) #22	RBBP8NL (ENSTGUG00000007735) #23	CABLES2 (ENSTGUG00000007738) #24	RPS21 (ENSTGUG00000007750) ##25	LAMA5 (ENSTGUG00000007752) #26	ADRM1 (ENSTGUG00000007836) #27	OSBPL2 (ENSTGUG00000021939) #28	HRH3 (ENSTGUG00000007816) #29	MTG2 (ENSTGUG00000007823) #30	PSMA7 (ENSTGUG00000007864) #32	LSM14B (ENSTGUG00000007884) #33	TAF4 (ENSTGUG00000007892) #34	CDH4 (ENSTGUG00000007909) #35	ENSTGUG00000028411 #37	PPP1R3D (ENSTGUG00000023326)	SYCP2 (ENSTGUG00000018179)
Common canary	MODERN SPECIES	21	ENSSCAG00000014739	ARFGAP1 (ENSSCAG00000014752) #7	NKAIN4 (ENSSCAG00000014769) ##8	BIRC7 (ENSSCAG00000014776) #9	YTHDF1 (ENSSCAG00000014786) #10	BHLHE23 (ENSSCAG00000014796) #11	SLC17A9 (ENSSCAG00000014804) #12	GID8 (ENSSCAG00000014826) #13	DIDO1 (ENSSCAG00000014834) #14	TCFL5 (ENSSCAG00000014842) #15	OGFR (ENSSCAG00000014846) #17	MRGBP (ENSSCAG00000014854) #18	NTSR1 (ENSSCAG00000014863) #19	SLCO4A1 (ENSSCAG00000014874) #20	ENSSCAG00000014901	GATA5 (ENSSCAG00000014913) #22	RBBP8NL (ENSSCAG00000014918) #23	CABLES2 (ENSSCAG00000014923) #24	RPS21 (ENSSCAG00000014930) ##25	LAMA5 (ENSSCAG00000015010) #26	ADRM1 (ENSSCAG00000015218) #27	OSBPL2 (ENSSCAG00000015222) #28	HRH3 (ENSSCAG00000015240) #29	MTG2 (ENSSCAG00000015244) #30	ENSSCAG00000015247 #31	PSMA7 (ENSSCAG00000015249) #32	ENSSCAG00000015251 #33	ENSSCAG00000015252 #33	TAF4 (ENSSCAG00000015255) #34	ENSSCAG00000015262	CDH4 (ENSSCAG00000015267) #35
Medium ground finch	MODERN SPECIES	40	ENSGFOG00000009879	ARFGAP1 (ENSGFOG00000009862) #7	NKAIN4 (ENSGFOG00000009843) ##8	BIRC7 (ENSGFOG00000009835) #9	YTHDF1 (ENSGFOG00000009828) #10	SLC17A9 (ENSGFOG00000009808) #12	GID8 (ENSGFOG00000009803) #13	DIDO1 (ENSGFOG00000009796) #14	TCFL5 (ENSGFOG00000009771) #15	ENSGFOG00000009753 #16	OGFR (ENSGFOG00000009747) #17	MRGBP (ENSGFOG00000009739) #18	NTSR1 (ENSGFOG00000009733) #19	ENSGFOG00000009731	SLCO4A1 (ENSGFOG00000009715) #20	GATA5 (ENSGFOG00000009642) #22	CABLES2 (ENSGFOG00000009634) #24	RPS21 (ENSGFOG00000009631) ##25
Flycatcher	MODERN SPECIES	12	ARFGAP1 (ENSFALG00000026353) #7	NKAIN4 (ENSFALG00000010455) ##8	BIRC7 (ENSFALG00000010458) #9	YTHDF1 (ENSFALG00000010463) #10	BHLHE23 (ENSFALG00000010468) #11	SLC17A9 (ENSFALG00000010473) #12	GID8 (ENSFALG00000010483) #13	DIDO1 (ENSFALG00000010488) #14	TCFL5 (ENSFALG00000024225) #15	ENSFALG00000010500 #16	OGFR (ENSFALG00000025576) #17	MRGBP (ENSFALG00000028338) #18	ENSFALG00000026281 #19	SLCO4A1 (ENSFALG00000025971) #20	ENSFALG00000025679 #21	GATA5 (ENSFALG00000010551) #22	RBBP8NL (ENSFALG00000024573) #23	CABLES2 (ENSFALG00000028862) #24	ENSFALG00000010558 ##25	LAMA5 (ENSFALG00000010560) #26	ADRM1 (ENSFALG00000010566) #27	OSBPL2 (ENSFALG00000010580) #28	HRH3 (ENSFALG00000024557) #29	MTG2 (ENSFALG00000010600) #30	SS18L1 (ENSFALG00000010601) #31	PSMA7 (ENSFALG00000010605) #32	ENSFALG00000010618 #33	ENSFALG00000023683 #33	TAF4 (ENSFALG00000010629) #34	CDH4 (ENSFALG00000010639) #35	CDH26 (ENSFALG00000010655)
Great tit	MODERN SPECIES	12	ENSPMJG00000007294	ARFGAP1 (ENSPMJG00000007302) #7	NKAIN4 (ENSPMJG00000007318) ##8	BIRC7 (ENSPMJG00000007326) #9	YTHDF1 (ENSPMJG00000007329) #10	BHLHE23 (ENSPMJG00000007353) #11	SLC17A9 (ENSPMJG00000007357) #12	GID8 (ENSPMJG00000007358) #13	DIDO1 (ENSPMJG00000007359) #14	TCFL5 (ENSPMJG00000007361) #15	OGFR (ENSPMJG00000007365) #17	MRGBP (ENSPMJG00000007370) #18	NTSR1 (ENSPMJG00000007373) #19	SLCO4A1 (ENSPMJG00000007375) #20	ENSPMJG00000007384	GATA5 (ENSPMJG00000007390) #22	RBBP8NL (ENSPMJG00000007392) #23	CABLES2 (ENSPMJG00000007397) #24	LAMA5 (ENSPMJG00000007407) #26	ADRM1 (ENSPMJG00000007633) #27	OSBPL2 (ENSPMJG00000007636) #28	HRH3 (ENSPMJG00000007640) #29	MTG2 (ENSPMJG00000007641) #30	SS18L1 (ENSPMJG00000007653) #31	PSMA7 (ENSPMJG00000007654) #32	LSM14B (ENSPMJG00000007655) #33	TAF4 (ENSPMJG00000007656) #34	CDH4 (ENSPMJG00000007666) #35	CDH26 (ENSPMJG00000008768)	FAM217B (ENSPMJG00000008769) #37	PPP1R3D (ENSPMJG00000008770)
Galloanserae	ANCESTRAL SPECIES	15	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Anatidae	ANCESTRAL SPECIES	22	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Pink-footed goose	MODERN SPECIES	10	ARFGAP1 (ENSABRG00000006095) #7	NKAIN4 (ENSABRG00000006089) ##8	BIRC7 (ENSABRG00000006077) #9	YTHDF1 (ENSABRG00000006064) #10	ENSABRG00000006061	ENSABRG00000006034	BHLHE23 (ENSABRG00000006028) #11	SLC17A9 (ENSABRG00000005983) #12	GID8 (ENSABRG00000005950) #13	DIDO1 (ENSABRG00000005803) #14	TCFL5 (ENSABRG00000005756) #15	OGFR (ENSABRG00000005699) #17	MRGBP (ENSABRG00000005636) #18	NTSR1 (ENSABRG00000005630) #19	SLCO4A1 (ENSABRG00000005623) #20	GATA5 (ENSABRG00000005608) #22	RBBP8NL (ENSABRG00000005586) #23	CABLES2 (ENSABRG00000005562) #24	RPS21 (ENSABRG00000005539) ##25	LAMA5 (ENSABRG00000004759) #26	ADRM1 (ENSABRG00000003927) #27	OSBPL2 (ENSABRG00000002290) #28	HRH3 (ENSABRG00000001122) #29	MTG2 (ENSABRG00000000672) #30	SS18L1 (ENSABRG00000000648) #31	PSMA7 (ENSABRG00000000632) #32	LSM14B (ENSABRG00000000552) #33	CDH4 (ENSABRG00000000345) #35	CDH26 (ENSABRG00000000281)	FAM217B (ENSABRG00000000262) #37	PPP1R3D (ENSABRG00000000254)
Duck	MODERN SPECIES	1624																GATA5 (ENSAPLG00000015144) #22
Phasianidae	ANCESTRAL SPECIES	15	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01090000262302	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000161921
Japanese quail	MODERN SPECIES	12	BIRC7 (ENSCJPG00005003125) #9	YTHDF1 (ENSCJPG00005003123) #10	BHLHB4 (ENSCJPG00005003114) #11	SLC17A9 (ENSCJPG00005003112) #12	GID8 (ENSCJPG00005003111) #13	DIDO1 (ENSCJPG00005003105) #14	TCFL5 (ENSCJPG00005003103) #15	ENSCJPG00005003099 #16	OGFR (ENSCJPG00005003095) #17	MRGBP (ENSCJPG00005003093) #18	NTSR1 (ENSCJPG00005003089) #19	ENSCJPG00005003088	ENSCJPG00005003087	ENSCJPG00005003085	SLCO4A1 (ENSCJPG00005003076) #20	GATA5 (ENSCJPG00005003073) #22	RBBP8NL (ENSCJPG00005003069) #23	CABLES2 (ENSCJPG00005003062) #24	RPS21 (ENSCJPG00005003060) ##25	LAMA5 (ENSCJPG00005003027) #26	ADRM1 (ENSCJPG00005003018) #27	OSBPL2 (ENSCJPG00005003003) #28	HRH3 (ENSCJPG00005002991) #29	MTG2 (ENSCJPG00005002986) #30	SS18L1 (ENSCJPG00005002978) #31	PSMA7 (ENSCJPG00005002975) #32	LSM14B (ENSCJPG00005002974) #33	TAF4 (ENSCJPG00005002970) #34	CDH4 (ENSCJPG00005002963) #35	FAM217B (ENSCJPG00005002957) #37	PPP1R3D (ENSCJPG00005002953)
Phasianidae_b	ANCESTRAL SPECIES	15	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000163687	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000154543.a #37	ENSGT00940000161921
Turkey	MODERN SPECIES	14	ENSMGAG00000022482	ENSMGAG00000005220 #35	ENSMGAG00000005271 #34	ENSMGAG00000005300 #33	ENSMGAG00000005318 #32	SS18L1 (ENSMGAG00000005356) #31	ENSMGAG00000005442 #29	ENSMGAG00000005418 #30	OSBPL2 (ENSMGAG00000005451) #28	ENSMGAG00000019345 #27	ENSMGAG00000005514 #26	ENSMGAG00000005506 #27	ENSMGAG00000005698 ##25	ENSMGAG00000005708 #24	ENSMGAG00000005727 #23	ENSMGAG00000005744 #22	ENSMGAG00000005776 #20	ENSMGAG00000005841 #19	MRGBP (ENSMGAG00000005847) #18	TCFL5 (ENSMGAG00000021882) #15	ENSMGAG00000005875	ENSMGAG00000005862 #17	DIDO1 (ENSMGAG00000006090) #14	ENSMGAG00000006105 #13	ENSMGAG00000006123 #12	ENSMGAG00000018427 #12	ENSMGAG00000006134 #11	YTHDF1 (ENSMGAG00000006139) #10	ENSMGAG00000006181 ##8	ENSMGAG00000006164 #9	ARFGAP1 (ENSMGAG00000021728) #7
Chicken	MODERN SPECIES	12	DEPTOR (ENSGALG00010023069)	ARFGAP1 (ENSGALG00010023048) #7	NKAIN4 (ENSGALG00010024194) ##8	BIRC7 (ENSGALG00010024168) #9	YTHDF1 (ENSGALG00010024141) #10	BHLHE23 (ENSGALG00010024982) #11	SLC17A9 (ENSGALG00010021754) #12	GID8 (ENSGALG00010024129) #13	DIDO1 (ENSGALG00010024124) #14	TCFL5 (ENSGALG00010022356) #15	COL9A3 (ENSGALG00010022320)	OGFR (ENSGALG00010022308) #17	MRGBP (ENSGALG00010022299) #18	NTSR1 (ENSGALG00010021510) #19	SLCO4A1 (ENSGALG00010022597) #20	GATA5 (ENSGALG00010022343) #22	RBBP8NL (ENSGALG00010022609) #23	CABLES2 (ENSGALG00010021350) #24	RPS21 (ENSGALG00010021346) ##25	LAMA5 (ENSGALG00010022979) #26	ADRM1 (ENSGALG00010022954) #27	OSBPL2 (ENSGALG00010022888) #28	HRH3 (ENSGALG00010022833) #29	MTG2 (ENSGALG00010022830) #30	SS18L1 (ENSGALG00010022825) #31	PSMA7 (ENSGALG00010022808) #32	LSM14B (ENSGALG00010022801) #33	TAF4 (ENSGALG00010022795) #34	CDH4 (ENSGALG00010022776) #35	FAM217B (ENSGALG00010024565) #37	PPP1R3D (ENSGALG00010024564)
Australian saltwater crocodile	MODERN SPECIES	59	KCNQ2 (ENSCPRG00005005896)	CHRNA4 (ENSCPRG00005005873)	ENSCPRG00005005854	ENSCPRG00005005795	ENSCPRG00005005780 ##8	ENSCPRG00005005771	YTHDF1 (ENSCPRG00005005766) #10	SLC17A9 (ENSCPRG00005005743) #12	GID8 (ENSCPRG00005005740) #13	DIDO1 (ENSCPRG00005005723) #14	TCFL5 (ENSCPRG00005005722) #15	ENSCPRG00005005699 #18	NTSR1 (ENSCPRG00005005694) #19	ENSCPRG00005005684	SLCO4A1 (ENSCPRG00005005674) #20	GATA5 (ENSCPRG00005005663) #22	RBBP8NL (ENSCPRG00005005655) #23	CABLES2 (ENSCPRG00005005641) #24	RPS21 (ENSCPRG00005005632) ##25	LAMA5 (ENSCPRG00005005529) #26	ADRM1 (ENSCPRG00005005435) #27	OSBPL2 (ENSCPRG00005005417) #28	HRH3 (ENSCPRG00005005411) #29	SS18L1 (ENSCPRG00005005399) #31	PSMA7 (ENSCPRG00005005389) #32	LSM14B (ENSCPRG00005005381) #33	TAF4 (ENSCPRG00005005323) #34	CDH4 (ENSCPRG00005005277) #35	CDH26 (ENSCPRG00005005229)	FAM217B (ENSCPRG00005005224) #37	PPP1R3D (ENSCPRG00005005223)
Lepidosauria	ANCESTRAL SPECIES	6	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000180601	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Episquamata	ANCESTRAL SPECIES	1	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Laterata	ANCESTRAL SPECIES	14	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01020000230601	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Common wall lizard	MODERN SPECIES	14	YTHDF1 (ENSPMRG00000003853) #10	ENSPMRG00000003847	ENSPMRG00000004755	BHLHE23 (ENSPMRG00000004753) #11	SLC17A9 (ENSPMRG00000004747) #12	GID8 (ENSPMRG00000004738) #13	DIDO1 (ENSPMRG00000004709) #14	TCFL5 (ENSPMRG00000004692) #15	ENSPMRG00000004660 #16	OGFR (ENSPMRG00000004647) #17	MRGBP (ENSPMRG00000004639) #18	NTSR1 (ENSPMRG00000004632) #19	ENSPMRG00000004626	ENSPMRG00000004622	SLCO4A1 (ENSPMRG00000004613) #20	GATA5 (ENSPMRG00000004600) #22	RBBP8NL (ENSPMRG00000004595) #23	CABLES2 (ENSPMRG00000004586) #24	ENSPMRG00000004578 ##25	ENSPMRG00000004576	LAMA5 (ENSPMRG00000004278) #26	ADRM1 (ENSPMRG00000004214) #27	OSBPL2 (ENSPMRG00000004161) #28	ENSPMRG00000004148	HRH3 (ENSPMRG00000004103) #29	MTG2 (ENSPMRG00000004089) #30	SS18L1 (ENSPMRG00000004078) #31	PSMA7 (ENSPMRG00000004069) #32	LSM14B (ENSPMRG00000004055) #33	TAF4 (ENSPMRG00000003939) #34	CDH4 (ENSPMRG00000003908) #35
Argentine black and white tegu	MODERN SPECIES	49	NKAIN4 (ENSSMRG00000012686) ##8	BIRC7 (ENSSMRG00000012684) #9	YTHDF1 (ENSSMRG00000012683) #10	BHLHE23 (ENSSMRG00000012675) #11	ENSSMRG00000012673	SLC17A9 (ENSSMRG00000012672) #12	GID8 (ENSSMRG00000012671) #13	DIDO1 (ENSSMRG00000012669) #14	ENSSMRG00000012668 #15	ENSSMRG00000012667 #15	ENSSMRG00000012665 #16	OGFR (ENSSMRG00000012661) #17	MRGBP (ENSSMRG00000012660) #18	NTSR1 (ENSSMRG00000012659) #19	SLCO4A1 (ENSSMRG00000012647) #20	GATA5 (ENSSMRG00000012640) #22	RBBP8NL (ENSSMRG00000012639) #23	CABLES2 (ENSSMRG00000012638) #24	RPS21 (ENSSMRG00000012637) ##25	LAMA5 (ENSSMRG00000012631) #26	ADRM1 (ENSSMRG00000012629) #27	OSBPL2 (ENSSMRG00000012628) #28	HRH3 (ENSSMRG00000012624) #29	MTG2 (ENSSMRG00000012623) #30	SS18L1 (ENSSMRG00000012622) #31	PSMA7 (ENSSMRG00000012621) #32	LSM14B (ENSSMRG00000012615) #33	TAF4 (ENSSMRG00000012607) #34	CDH4 (ENSSMRG00000012600) #35	CDH26 (ENSSMRG00000012589)	FAM217B (ENSSMRG00000012588) #37
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Elapidae	ANCESTRAL SPECIES	1	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762.b #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589.w	ENSGT00940000154543.a #37
Elapidae_a	ANCESTRAL SPECIES	3	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762.b #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589.w	ENSGT00940000154543.a #37
Acanthophiinae	ANCESTRAL SPECIES	2	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406 #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT01020000230601	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515.p ##25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762.b #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589.w	ENSGT00940000154543.a #37
Mainland tiger snake	MODERN SPECIES	10													NTSR1 (ENSNSUG00000014059) #19	SLCO4A1 (ENSNSUG00000014060) #20	ENSNSUG00000014062	GATA5 (ENSNSUG00000014066) #22	CABLES2 (ENSNSUG00000014090) #24	RPS21 (ENSNSUG00000014091) ##25	ENSNSUG00000014092 #26	ADRM1 (ENSNSUG00000014093) #27	OSBPL2 (ENSNSUG00000014095) #28	HRH3 (ENSNSUG00000014096) #29	MTG2 (ENSNSUG00000014143) #30	ENSNSUG00000014144 #31	PSMA7 (ENSNSUG00000014145) #32	LSM14B (ENSNSUG00000014146) #33	TAF4 (ENSNSUG00000014148) #34	CDH4 (ENSNSUG00000014149) #35	CDH26 (ENSNSUG00000014151)	FAM217B (ENSNSUG00000014152) #37	PPP1R3D (ENSNSUG00000014154)
Eastern brown snake	MODERN SPECIES	8	ENSPTXG00000013190	ENSPTXG00000013191	ARFGAP1 (ENSPTXG00000013192) #7	ENSPTXG00000013193 ##8	BIRC7 (ENSPTXG00000013194) #9	YTHDF1 (ENSPTXG00000013195) #10	BHLHE23 (ENSPTXG00000013197) #11	SLC17A9 (ENSPTXG00000013198) #12	GID8 (ENSPTXG00000013206) #13	DIDO1 (ENSPTXG00000013207) #14	TCFL5 (ENSPTXG00000013209) #15	OGFR (ENSPTXG00000013210) #17	MRGBP (ENSPTXG00000013211) #18	NTSR1 (ENSPTXG00000013212) #19	SLCO4A1 (ENSPTXG00000013213) #20	GATA5 (ENSPTXG00000013216) #22	RBBP8NL (ENSPTXG00000013217) #23	CABLES2 (ENSPTXG00000000034) #24	RPS21 (ENSPTXG00000000063) ##25	LAMA5 (ENSPTXG00000000396) #26	ADRM1 (ENSPTXG00000001974) #27	OSBPL2 (ENSPTXG00000001975) #28	HRH3 (ENSPTXG00000001977) #29	MTG2 (ENSPTXG00000001990) #30	SS18L1 (ENSPTXG00000001994) #31	PSMA7 (ENSPTXG00000001998) #32	LSM14B (ENSPTXG00000002004) #33	TAF4 (ENSPTXG00000002009) #34	CDH4 (ENSPTXG00000002014) #35	CDH26 (ENSPTXG00000002018)	FAM217B (ENSPTXG00000002019) #37
Blue-lipped sea krait	MODERN SPECIES	4376																ENSLLTG00000016543 #22
Indian cobra	MODERN SPECIES	2	ENSNNAG00000003135	ARFGAP1 (ENSNNAG00000003264) #7	BIRC7 (ENSNNAG00000003288) #9	YTHDF1 (ENSNNAG00000003299) #10	BHLHE23 (ENSNNAG00000003313) #11	SLC17A9 (ENSNNAG00000000826) #12	GID8 (ENSNNAG00000000846) #13	DIDO1 (ENSNNAG00000000882) #14	TCFL5 (ENSNNAG00000000936) #15	OGFR (ENSNNAG00000000952) #17	NTSR1 (ENSNNAG00000000967) #19	SLCO4A1 (ENSNNAG00000000979) #20	ENSNNAG00000001003	ENSNNAG00000001023	ENSNNAG00000001032	GATA5 (ENSNNAG00000001050) #22	RBBP8NL (ENSNNAG00000001075) #23	CABLES2 (ENSNNAG00000001114) #24	LAMA5 (ENSNNAG00000001168) #26	ADRM1 (ENSNNAG00000001451) #27	OSBPL2 (ENSNNAG00000001487) #28	HRH3 (ENSNNAG00000001540) #29	MTG2 (ENSNNAG00000001619) #30	SS18L1 (ENSNNAG00000001633) #31	PSMA7 (ENSNNAG00000001644) #32	LSM14B (ENSNNAG00000001657) #33	TAF4 (ENSNNAG00000001673) #34	CDH4 (ENSNNAG00000001810) #35	ENSNNAG00000002410	ENSNNAG00000002425	FAM217B (ENSNNAG00000002449) #37
Lizard	MODERN SPECIES	3	NKAIN4 (ENSACAG00000026860) ##8	BIRC7 (ENSACAG00000043634) #9	YTHDF1 (ENSACAG00000005560) #10	ENSACAG00000044252	ENSACAG00000042736	SLC17A9 (ENSACAG00000005516) #12	GID8 (ENSACAG00000005506) #13	DIDO1 (ENSACAG00000005462) #14	TCFL5 (ENSACAG00000005435) #15	ENSACAG00000005213 #16	OGFR (ENSACAG00000005168) #17	MRGBP (ENSACAG00000005153) #18	NTSR1 (ENSACAG00000025612) #19	ENSACAG00000044153	SLCO4A1 (ENSACAG00000005096) #20	GATA5 (ENSACAG00000005064) #22	CABLES2 (ENSACAG00000005032) #24	RPS21 (ENSACAG00000037786) ##25	ENSACAG00000039758	LAMA5 (ENSACAG00000004758) #26	ADRM1 (ENSACAG00000004732) #27	OSBPL2 (ENSACAG00000004657) #28	ENSACAG00000039986 #29	ENSACAG00000004624 #29	ENSACAG00000043437	MTG2 (ENSACAG00000016072) #30	SS18L1 (ENSACAG00000016087) #31	PSMA7 (ENSACAG00000016158) #32	LSM14B (ENSACAG00000016195) #33	TAF4 (ENSACAG00000016214) #34	CDH4 (ENSACAG00000016236) #35
tuatara	MODERN SPECIES	1214	ENSSPUG00000015313	ARFGAP1 (ENSSPUG00000015233) #7	ENSSPUG00000015182 ##8	BIRC7 (ENSSPUG00000015159) #9	ENSSPUG00000015147	YTHDF1 (ENSSPUG00000015143) #10	BHLHE23 (ENSSPUG00000015090) #11	SLC17A9 (ENSSPUG00000015070) #12	GID8 (ENSSPUG00000015056) #13	ENSSPUG00000015045 #14	ENSSPUG00000015028 #14	OGFR (ENSSPUG00000014989) #17	MRGBP (ENSSPUG00000014844) #18	NTSR1 (ENSSPUG00000014802) #19	SLCO4A1 (ENSSPUG00000014790) #20	GATA5 (ENSSPUG00000014763) #22	CABLES2 (ENSSPUG00000014749) #24	ENSSPUG00000014739 ##25	LAMA5 (ENSSPUG00000014592) #26	ADRM1 (ENSSPUG00000014518) #27	OSBPL2 (ENSSPUG00000014462) #28	MTG2 (ENSSPUG00000014422) #30	SS18L1 (ENSSPUG00000014410) #31	ENSSPUG00000014401 #31	PSMA7 (ENSSPUG00000014388) #32	LSM14B (ENSSPUG00000014360) #33	TAF4 (ENSSPUG00000014338) #34	CDH4 (ENSSPUG00000014313) #35
Anura	ANCESTRAL SPECIES	31	ENSGT00940000164411	ENSGT00890000139515 #7	ENSGT00940000157989.a.b ##8	ENSGT00940000160406.a #9	ENSGT00940000156911 #10	ENSGT00940000162992 #11	ENSGT00940000158186 #12	ENSGT00390000015162 #13	ENSGT00940000155532 #14	ENSGT00390000002821 #15	ENSGT00940000161930 #16	ENSGT00390000018730.A #17	ENSGT00390000007823 #18	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00400000022086.b.b #24	ENSGT00390000017515 #25	ENSGT00940000156537 #26	ENSGT00390000013839 #27	ENSGT00940000158762 #28	ENSGT00940000161502 #29	ENSGT00940000157379 #30	ENSGT00940000159853 #31	ENSGT00940000159695 #32	ENSGT00940000156010 #33	ENSGT00390000011620.a.a.b #34	ENSGT00940000158073 #35	ENSGT00940000161589	ENSGT00940000154543.a #37
Leishan spiny toad	MODERN SPECIES	3	ZNF341 (ENSLLEG00000028995)	CHMP4B (ENSLLEG00000029024)	RALY (ENSLLEG00000029052)	ENSLLEG00000029071	EIF2S2 (ENSLLEG00000029102)	DIDO1 (ENSLLEG00000029275) #14	ENSLLEG00000029306	TCFL5 (ENSLLEG00000029320) #15	ENSLLEG00000029342 #16	ENSLLEG00000029403 #17	ENSLLEG00000029473 #17	MRGBP (ENSLLEG00000029499) #18	NTSR1 (ENSLLEG00000029511) #19	ENSLLEG00000029519	SLCO4A1 (ENSLLEG00000029528) #20	GATA5 (ENSLLEG00000029551) #22	ENSLLEG00000029575 #23	CABLES2 (ENSLLEG00000029586) #24	LAMA5 (ENSLLEG00000029653) #26	ADRM1 (ENSLLEG00000029790) #27	OSBPL2 (ENSLLEG00000029968) #28	HRH3 (ENSLLEG00000030077) #29	MTG2 (ENSLLEG00000030106) #30	SS18L1 (ENSLLEG00000030159) #31	PSMA7 (ENSLLEG00000030206) #32	ENSLLEG00000030338 #33	TAF4 (ENSLLEG00000030383) #34	CDH4 (ENSLLEG00000014748) #35	ENSLLEG00000017422	ENSLLEG00000017493	CDH26 (ENSLLEG00000018521)
Frog	MODERN SPECIES	1	gcnt7 (ENSXETG00000033795)	rtf2 (ENSXETG00000012028)	tfap2c (ENSXETG00000012025)	bmp7.1 (ENSXETG00000011272)	spo11 (ENSXETG00000011271)	rae1 (ENSXETG00000048683)	rbm38 (ENSXETG00000043310)	pck1 (ENSXETG00000011266)	ENSXETG00000011265	zbp1 (ENSXETG00000043182)	pmepa1 (ENSXETG00000044040)	ENSXETG00000041597	c20orf85 (ENSXETG00000011262)	ENSXETG00000011260	slco4a1 (ENSXETG00000011257) #20	gata5 (ENSXETG00000005127) #22	rbbp8nl (ENSXETG00000002015) #23	cables2 (ENSXETG00000002013) #24	rps21 (ENSXETG00000002012) #25	ENSXETG00000002008 #26	ENSXETG00000048930 #26	adrm1 (ENSXETG00000002006) #28	hrh3 (ENSXETG00000049145)	mtg2 (ENSXETG00000002001) #30	ss18l1 (ENSXETG00000039365) #31	psma7 (ENSXETG00000001998) #32	lsm14b (ENSXETG00000001997) #33	ENSXETG00000047018	taf4 (ENSXETG00000001996) #34	ENSXETG00000045999	ENSXETG00000047028
Coelacanth	MODERN SPECIES	544														SLCO4A1 (ENSLACG00000016459) #20	sh3bgrl (ENSLACG00000016177)	GATA5 (ENSLACG00000014444) #22	ENSLACG00000013497 #23	CABLES2 (ENSLACG00000012872) #24	rps21 (ENSLACG00000012753) #25	LAMA5 (ENSLACG00000009138) #26	ADRM1 (ENSLACG00000008853) #27	OSBPL2 (ENSLACG00000008076) #28	HRH3 (ENSLACG00000006816) #29	ENSLACG00000006466	MTG2 (ENSLACG00000006066) #30	SS18L1 (ENSLACG00000005205) #31	PSMA7 (ENSLACG00000004628) #32	LSM14B (ENSLACG00000003849) #33	TAF4 (ENSLACG00000000501) #34
Actinopterygii	ANCESTRAL SPECIES	81				ENSGT00390000009842	ENSGT01090000260003.a.b.b.a.a.b.b.a	ENSGT00390000002407.c	ENSGT00950000183056.B.a	ENSGT00520000055567.a.a.a	ENSGT00390000005318.b.a	ENSGT00940000153311.b	ENSGT00940000164997	ENSGT00520000055634.b	ENSGT00940000177392	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00520000055578.a.a.c	ENSGT00940000157729	ENSGT00390000012419	ENSGT00940000156928	ENSGT00940000166425	ENSGT00490000043329.a.a.a	ENSGT00940000163617	ENSGT00940000156358	ENSGT00950000182982.B
Neopterygii	ANCESTRAL SPECIES	82				ENSGT00390000009842	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a	ENSGT00520000055567.a.a.a	ENSGT00390000005318.b.a	ENSGT00940000153311.b	ENSGT00940000164997	ENSGT00520000055634.b	ENSGT00940000154655.b	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00520000055578.a.a.c	ENSGT00940000157729	ENSGT00390000012419	ENSGT00940000156928	ENSGT00940000166425	ENSGT00490000043329.a.a.a	ENSGT00940000163617	ENSGT00940000156358	ENSGT00950000182982.B
Osteoglossocephalai	ANCESTRAL SPECIES	84	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a
Osteoglossiformes	ANCESTRAL SPECIES	66	ENSGT00940000153481.B	ENSGT00530000063631.b.m	ENSGT00950000183211.a.a.a.kb	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.a	ENSGT00390000002407.c.d.a	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a.t	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198.ab	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364	ENSGT00940000163127	ENSGT00940000160661	ENSGT00940000173560	ENSGT00940000160391.c	ENSGT01070000253766.B.f.b	ENSGT00400000022086.b.a.b ##24
Asian bonytongue	MODERN SPECIES	11	ADNP (ENSSFOG00015017648)	pard6b (ENSSFOG00015017642)	ARFGEF2 (ENSSFOG00015017513)	bcl2l1 (ENSSFOG00015030261)	cox4i2 (ENSSFOG00015024531)	FAM110A (ENSSFOG00015017472)	nsfl1c (ENSSFOG00015017459)	ENSSFOG00015017438	fkbp1aa (ENSSFOG00015026589)	sdcbp2 (ENSSFOG00015017396)	SNPH (ENSSFOG00015017374)	NTSR1 (ENSSFOG00015017357) #19	SLCO4A1 (ENSSFOG00015017248) #20	ENSSFOG00015017348	ENSSFOG00015030590	gata5 (ENSSFOG00015017161) #22	ENSSFOG00015017138 #23	HCK (ENSSFOG00015017090)	tm9sf4 (ENSSFOG00015025033)	plagl2 (ENSSFOG00015032815)	pofut1 (ENSSFOG00015030426)	kif3b (ENSSFOG00015016947)	pcmtd2a (ENSSFOG00015016938)	MYT1 (ENSSFOG00015016732)	NPBWR1 (ENSSFOG00015025715)	oprl1 (ENSSFOG00015016672)	rgs19 (ENSSFOG00015016616)	tcea2 (ENSSFOG00015016584)	ENSSFOG00015025708	XKR7 (ENSSFOG00015030891)	CCM2L (ENSSFOG00015016545)
P. kingsleyae	MODERN SPECIES	364													NTSR1 (ENSPKIG00000006216) #19	ENSPKIG00000006209	SLCO4A1 (ENSPKIG00000006158) #20	gata5 (ENSPKIG00000006112) #22	ENSPKIG00000006076 #23	HCK (ENSPKIG00000006025)	tm9sf4 (ENSPKIG00000005977)	plagl2 (ENSPKIG00000005933)	pofut1 (ENSPKIG00000005881)	kif3b (ENSPKIG00000005846)	PCMTD2 (ENSPKIG00000005817)	MYT1 (ENSPKIG00000005600)
Clupeocephala	ANCESTRAL SPECIES	53	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000163127	ENSGT00940000160661	ENSGT00940000160391	ENSGT00940000153739.a.a	ENSGT00940000159974	ENSGT00940000162709	ENSGT01070000253766.B.f.a
Euteleosteomorpha	ANCESTRAL SPECIES	44	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00390000004735.C
Acanthomorphata	ANCESTRAL SPECIES	3	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000154502	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000178928	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Pinecone sodierfish	MODERN SPECIES	21	ENSMMDG00005005928	ENSMMDG00005005923	ENSMMDG00005005919	ENSMMDG00005005917	ENSMMDG00005005913	ENSMMDG00005005911	ENSMMDG00005005909	ENSMMDG00005005907	ENSMMDG00005005905	ENSMMDG00005005904	ENSMMDG00005005902	ENSMMDG00005005898	ENSMMDG00005005897	ENSMMDG00005005895	ENSMMDG00005005893	gata5 (ENSMMDG00005005885) #22	HCK (ENSMMDG00005005694)	tm9sf4 (ENSMMDG00005004951)	plagl2 (ENSMMDG00005004928)	pofut1 (ENSMMDG00005004914)	kif3b (ENSMMDG00005004912)	PCMTD2 (ENSMMDG00005004909)	ENSMMDG00005004903	ENSMMDG00005004898	ENSMMDG00005004888	ENSMMDG00005004885	snrpg (ENSMMDG00005004881)	plpbp (ENSMMDG00005004869)	tmed4 (ENSMMDG00005004854)	ikbkg (ENSMMDG00005004838)	sephs3 (ENSMMDG00005004799)
Percomorphaceae	ANCESTRAL SPECIES	25	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000178928	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Tiger tail seahorse	MODERN SPECIES	90	RNF223 (ENSHCOG00000003924)	DENND2C (ENSHCOG00000003932)	ampd1 (ENSHCOG00000003972)	ENSHCOG00000004041	csde1 (ENSHCOG00000004158)	SIKE1 (ENSHCOG00000004187)	ENSHCOG00000004202	HTR6 (ENSHCOG00000004211)	TMCO4 (ENSHCOG00000004214)	vwa1 (ENSHCOG00000004227)	ENSHCOG00000004319	PREX1 (ENSHCOG00000004400)	kcnq2a (ENSHCOG00000004440)	ENSHCOG00000000840	SLCO4A1 (ENSHCOG00000004468) #20	gata5 (ENSHCOG00000004480) #22	ENSHCOG00000004491 #23	HCK (ENSHCOG00000004526)	tm9sf4 (ENSHCOG00000004563)	chrna4b (ENSHCOG00000004588)	zgpat (ENSHCOG00000004674)	TTI1 (ENSHCOG00000004687)	VSTM2L (ENSHCOG00000004711)	ctnnbl1 (ENSHCOG00000004778)	ENSHCOG00000004837	ENSHCOG00000004848	znf341 (ENSHCOG00000004879)	itchb (ENSHCOG00000004956)	ENSHCOG00000004979	VDR (ENSHCOG00000005359)	HDAC7 (ENSHCOG00000005407)
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000178928	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.j.b	ENSGT00940000164374.A.j.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Carangaria	ANCESTRAL SPECIES	2	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.j.b	ENSGT00990000210396	ENSGT00940000164374.A.j.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Carangaria_A	ANCESTRAL SPECIES	54	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.j.b	ENSGT00990000210396	ENSGT00940000164374.A.j.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Seriola	ANCESTRAL SPECIES	113																ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Greater amberjack	MODERN SPECIES	191				NPHP4 (ENSSDUG00000014703)	dffb (ENSSDUG00000014683)	ENSSDUG00000014676	b3gnt7l (ENSSDUG00000014661)	CEP104 (ENSSDUG00000014643)	lrrc47 (ENSSDUG00000014618)	ENSSDUG00000014603	ENSSDUG00000014586	casp9 (ENSSDUG00000014565)	DNAJC16 (ENSSDUG00000014510)	SOGA1 (ENSSDUG00000014436)	osbpl2b (ENSSDUG00000014389) #28	gata5 (ENSSDUG00000014340) #22	HCK (ENSSDUG00000014320)	tm9sf4 (ENSSDUG00000014290)	plagl2 (ENSSDUG00000014274)	pofut1 (ENSSDUG00000014252)	kif3b (ENSSDUG00000014212)	PCMTD2 (ENSSDUG00000014186)	ENSSDUG00000014174	ENSSDUG00000014167	ENSSDUG00000014152	TBC1D22B (ENSSDUG00000014121)	ENSSDUG00000014114	snrpg (ENSSDUG00000014103)	plpbp (ENSSDUG00000014056)	tmed4 (ENSSDUG00000014040)	ikbkg (ENSSDUG00000014012)
Yellowtail amberjack	MODERN SPECIES	2481																gata5 (ENSSLDG00000003007) #22	ENSSLDG00000003034 #23	HCK (ENSSLDG00000003055)	tm9sf4 (ENSSLDG00000003079)
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	15	bcl2l1 (ENSLCAG00010000879)	cox4i2 (ENSLCAG00010000883)	FAM110A (ENSLCAG00010000885)	nsfl1c (ENSLCAG00010000889)	fkbp1ab (ENSLCAG00010000896)	sdcbp2 (ENSLCAG00010000910)	SNPH (ENSLCAG00010000923)	NTSR1 (ENSLCAG00010000926) #19	SLCO4A1 (ENSLCAG00010000935) #20	ENSLCAG00010000944	ENSLCAG00010000945	ENSLCAG00010000948	ENSLCAG00010000957	ENSLCAG00010000959	ENSLCAG00010000966	gata5 (ENSLCAG00010000982) #22	HCK (ENSLCAG00010001041)	tm9sf4 (ENSLCAG00010001557)	plagl2 (ENSLCAG00010001655)	pofut1 (ENSLCAG00010001658)	kif3b (ENSLCAG00010001662)	PCMTD2 (ENSLCAG00010001665)	MYT1 (ENSLCAG00010001677)	TBC1D22B (ENSLCAG00010001720)	ENSLCAG00010001768	snrpg (ENSLCAG00010001773)	plpbp (ENSLCAG00010001799)	tmed4 (ENSLCAG00010001803)
Barramundi perch	MODERN SPECIES	1406																gata5 (ENSLCAG00010007433) #22
Pleuronectoidei	ANCESTRAL SPECIES	41													ENSGT01080000257410.C #20	ENSGT00940000164374.A.j.b	ENSGT00940000164374.A.j.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Tongue sole	MODERN SPECIES	1	ENSCSEG00000003515	znf341 (ENSCSEG00000003536)	itchb (ENSCSEG00000003548)	ENSCSEG00000003575	VDR (ENSCSEG00000003582)	HDAC7 (ENSCSEG00000003593)	twist3 (ENSCSEG00000003645)	ENSCSEG00000003648	ENSCSEG00000003650	ENSCSEG00000003656	NTSR1 (ENSCSEG00000003659) #19	ENSCSEG00000003661	ENSCSEG00000003667	ENSCSEG00000003674	ENSCSEG00000003681	gata5 (ENSCSEG00000003690) #22	ENSCSEG00000003698 #23	HCK (ENSCSEG00000003708)	tm9sf4 (ENSCSEG00000003729)	plagl2 (ENSCSEG00000003764)	pofut1 (ENSCSEG00000003767)	kif3b (ENSCSEG00000003774)	ENSCSEG00000003783	ENSCSEG00000003796	ENSCSEG00000003799	ENSCSEG00000003803	GABRD (ENSCSEG00000003808)	ENSCSEG00000003829	gnb1a (ENSCSEG00000003839)	nadka (ENSCSEG00000003849)	ENSCSEG00000003868
Turbot	MODERN SPECIES	2	ENSSMAG00000002693	ENSSMAG00000002667	stk35 (ENSSMAG00000002624)	ENSSMAG00000002615	ENSSMAG00000002593	ENSSMAG00000002567	ENSSMAG00000034923	ENSSMAG00000033237	ENSSMAG00000011129	ENSSMAG00000011105	ENSSMAG00000011091	ENSSMAG00000011080	SLCO4A1 (ENSSMAG00000011046) #20	ENSSMAG00000000977	ENSSMAG00000023086	gata5 (ENSSMAG00000000905) #22	ENSSMAG00000000889 #23	HCK (ENSSMAG00000000875)	tm9sf4 (ENSSMAG00000000839)	plagl2 (ENSSMAG00000036259)	pofut1 (ENSSMAG00000000831)	kif3b (ENSSMAG00000000775)	ENSSMAG00000000746	ENSSMAG00000000997	ENSSMAG00000001033	ENSSMAG00000001108	ENSSMAG00000001166	snrpg (ENSSMAG00000034866)	plpbp (ENSSMAG00000001176)	tmed4 (ENSSMAG00000001198)	ENSSMAG00000001223
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.j.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Zig-zag eel	MODERN SPECIES	21	pard6b (ENSMAMG00000026219)	ENSMAMG00000016675	bcl2l1 (ENSMAMG00000016668)	cox4i2 (ENSMAMG00000016662)	ENSMAMG00000016661	ENSMAMG00000028297	nsfl1c (ENSMAMG00000016630)	fkbp1ab (ENSMAMG00000016625)	sdcbp2 (ENSMAMG00000016603)	SNPH (ENSMAMG00000016588)	NTSR1 (ENSMAMG00000016571) #19	ENSMAMG00000026791	SLCO4A1 (ENSMAMG00000016505) #20	ENSMAMG00000016553	ENSMAMG00000016483	gata5 (ENSMAMG00000016476) #22	ENSMAMG00000016459 #23	HCK (ENSMAMG00000025337)	tm9sf4 (ENSMAMG00000016369)	plagl2 (ENSMAMG00000016331)	pofut1 (ENSMAMG00000016307)	kif3b (ENSMAMG00000016267)	ENSMAMG00000016242	ENSMAMG00000016167	ENSMAMG00000016101	snrpg (ENSMAMG00000016077)	PROSC (ENSMAMG00000028031)	tmed4 (ENSMAMG00000016029)	ENSMAMG00000015953	ENSMAMG00000028686	ENSMAMG00000015914
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.j.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Siamese fighting fish	MODERN SPECIES	18	slc35c2 (ENSBSLG00000020874)	dpm1 (ENSBSLG00000020877)	adnpb (ENSBSLG00000020878)	pard6b (ENSBSLG00000020879)	ARFGEF2 (ENSBSLG00000020887)	bcl2l1 (ENSBSLG00000022135)	cox4i2 (ENSBSLG00000022139)	FAM110A (ENSBSLG00000022204)	nsfl1c (ENSBSLG00000022206)	fkbp1ab (ENSBSLG00000022217)	sdcbp2 (ENSBSLG00000022222)	SNPH (ENSBSLG00000022231)	NTSR1 (ENSBSLG00000022248) #19	SLCO4A1 (ENSBSLG00000022255) #20	ENSBSLG00000022277	gata5 (ENSBSLG00000022284) #22	HCK (ENSBSLG00000022294)	tm9sf4 (ENSBSLG00000022650)	plagl2 (ENSBSLG00000022661)	pofut1 (ENSBSLG00000022665)	kif3b (ENSBSLG00000022683)	PCMTD2 (ENSBSLG00000022702)	ENSBSLG00000022714	TBC1D22B (ENSBSLG00000023100)	ENSBSLG00000023121	snrpg (ENSBSLG00000023125)	plpbp (ENSBSLG00000023134)	tmed4 (ENSBSLG00000023181)	ikbkg (ENSBSLG00000023201)	sephs3 (ENSBSLG00000023212)	ap4b1 (ENSBSLG00000023226)
Climbing perch	MODERN SPECIES	20	ENSATEG00000000879	bcl2l1 (ENSATEG00000000873)	cox4i2 (ENSATEG00000025472)	ENSATEG00000000842	nsfl1c (ENSATEG00000000786)	fkbp1ab (ENSATEG00000000780)	sdcbp2 (ENSATEG00000000742)	SNPH (ENSATEG00000000711)	ENSATEG00000000694	ENSATEG00000000645	NTSR1 (ENSATEG00000000622) #19	SLCO4A1 (ENSATEG00000000561) #20	ENSATEG00000028545	ENSATEG00000026469	ENSATEG00000000516	gata5 (ENSATEG00000000420) #22	ENSATEG00000000407 #23	HCK (ENSATEG00000000402)	tm9sf4 (ENSATEG00000000321)	plagl2 (ENSATEG00000000282)	pofut1 (ENSATEG00000000259)	kif3b (ENSATEG00000000211)	ENSATEG00000027687	ENSATEG00000000172	ENSATEG00000000159	ENSATEG00000000069	ENSATEG00000000036	snrpg (ENSATEG00000023229)	plpbp (ENSATEG00000023221)	tmed4 (ENSATEG00000023216)	ENSATEG00000023184
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Tetraodontidae	ANCESTRAL SPECIES	2	ENSGT00940000165955	ENSGT00890000139436.A.b.a	ENSGT00940000160063.h	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a.e	ENSGT00940000156364.a.b	ENSGT00520000055578.a.a.c	ENSGT00940000164771.b	ENSGT00390000013727.c	ENSGT00940000156504.j	ENSGT00390000012058.c.b	ENSGT00940000153541.B	ENSGT00390000008714.a	ENSGT00940000157867.a.b	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00940000157472	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ENSTNIG00000002736	gas8 (ENSTNIG00000002737)	ndufaf5 (ENSTNIG00000002738)	ENSTNIG00000002739	ENSTNIG00000002744	ENSTNIG00000002745	ENSTNIG00000001539	ENSTNIG00000002748	rpf2 (ENSTNIG00000002749)	amd1 (ENSTNIG00000002751)	amd1 (ENSTNIG00000002750)	CDK19 (ENSTNIG00000002752)	ENSTNIG00000002760	NTSR1 (ENSTNIG00000002761) #19	nsfl1c (ENSTNIG00000002762)	gata5 (ENSTNIG00000002769) #22	ENSTNIG00000002774	ENSTNIG00000002775	ENSTNIG00000002777	ENSTNIG00000002785	ENSTNIG00000002830	gpx7 (ENSTNIG00000002786)	ENSTNIG00000002787	pomgnt1 (ENSTNIG00000002788)	TSPAN1 (ENSTNIG00000000821)	GRM6 (ENSTNIG00000002806)	SRPK3 (ENSTNIG00000002807)	UBL3 (ENSTNIG00000009908)	ENSTNIG00000002831	uqcc1 (ENSTNIG00000002832)	fam83c (ENSTNIG00000002833)
Tetraodon	MODERN SPECIES	26	PAX9 (ENSTNIG00000002104)	ACVR1B (ENSTNIG00000002103)	ENSTNIG00000002102	blmh (ENSTNIG00000002101)	ENSTNIG00000002100	ENSTNIG00000002099	ENSTNIG00000002098	ENSTNIG00000002094	ENSTNIG00000002093	NADK (ENSTNIG00000002092)	ENSTNIG00000002091	ENSTNIG00000002090	ENSTNIG00000001600	ENSTNIG00000002089	naprt (ENSTNIG00000002087)	gata5 (ENSTNIG00000002085) #22	ENSTNIG00000002084	ENSTNIG00000002083	ENSTNIG00000002082	ENSTNIG00000002081	ENSTNIG00000002080	crlf3 (ENSTNIG00000011283)	ENSTNIG00000002079	ENSTNIG00000002078	gmppb (ENSTNIG00000002077)	panx1a (ENSTNIG00000002076)	ENSTNIG00000002075	ENSTNIG00000019753	TOB2 (ENSTNIG00000002073)	ENSTNIG00000002071	ENSTNIG00000002070
Fugu	MODERN SPECIES	12													dedd (ENSTRUG00000001620)	SLCO4A1 (ENSTRUG00000002381) #20	ENSTRUG00000020558	gata5 (ENSTRUG00000030694) #22	ENSTRUG00000032559	tm9sf4 (ENSTRUG00000003184)	plagl2 (ENSTRUG00000027238)	TBC1D22B (ENSTRUG00000027134)	snrpg (ENSTRUG00000004040)	plpbp (ENSTRUG00000003881)	tmed4 (ENSTRUG00000003446)	ENSTRUG00000029875	ikbkg (ENSTRUG00000002414)	ccdc22 (ENSTRUG00000001754)	slc38a5b (ENSTRUG00000001541)	mthfr (ENSTRUG00000002976)	ENSTRUG00000026532	cnp-3 (ENSTRUG00000004003)	ENSTRUG00000000954
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Ballan wrasse	MODERN SPECIES	4559																gata5 (ENSLBEG00000029014) #22
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Eupecaria_C	ANCESTRAL SPECIES	5															ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Gilthead seabream	MODERN SPECIES	21	ENSSAUG00010012658	ENSSAUG00010012657	ENSSAUG00010012655	dennd2da (ENSSAUG00010012643)	stk38a (ENSSAUG00010012621)	ccdc22 (ENSSAUG00010012571)	tbc1d25 (ENSSAUG00010012561)	NDUFA11 (ENSSAUG00010012559)	rtel1 (ENSSAUG00010010664)	icmt (ENSSAUG00010010644)	rpl22 (ENSSAUG00010010635)	rcc2 (ENSSAUG00010010629)	LRRC38 (ENSSAUG00010010625)	EPHB2 (ENSSAUG00010009411)	ENSSAUG00010009389	gata5 (ENSSAUG00010009386) #22	ENSSAUG00010009382 #23	HCK (ENSSAUG00010004842)	tm9sf4 (ENSSAUG00010004728)	plagl2 (ENSSAUG00010004721)	pofut1 (ENSSAUG00010004719)	kif3b (ENSSAUG00010004715)	PCMTD2 (ENSSAUG00010004712)	MYT1 (ENSSAUG00010004691)	TBC1D22B (ENSSAUG00010002754)	ENSSAUG00010002706	snrpg (ENSSAUG00010002701)	plpbp (ENSSAUG00010002695)	tmed4 (ENSSAUG00010002684)	ENSSAUG00010002676	ikbkg (ENSSAUG00010002650)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000160063.h	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a.e	ENSGT00940000156364.a.b	ENSGT00520000055578.a.a.c	ENSGT00940000164771.b	ENSGT00390000013727.c	ENSGT00940000156759.a.a	ENSGT00390000012058.c.b	ENSGT00390000011228.b.a.f	ENSGT00940000153541.B	ENSGT00940000162660.a	ENSGT00390000008714.a	ENSGT00940000157867.a.b	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
European seabass	MODERN SPECIES	14	ENSDLAG00005010389	ENSDLAG00005012719	ENSDLAG00005033313	ENSDLAG00005027222	ENSDLAG00005010348	ENSDLAG00005027029	ENSDLAG00005033693	ENSDLAG00005010341	ENSDLAG00005010327	ENSDLAG00005009713	ENSDLAG00005032901	ENSDLAG00005021777	SLCO4A1 (ENSDLAG00005009570) #20	ENSDLAG00005009548	ENSDLAG00005008469	gata5 (ENSDLAG00005009520) #22	ENSDLAG00005009495 #23	HCK (ENSDLAG00005007005)	ENSDLAG00005031335	tm9sf4 (ENSDLAG00005006772)	plagl2 (ENSDLAG00005032122)	pofut1 (ENSDLAG00005006734)	ENSDLAG00005006724	kif3b (ENSDLAG00005006718)	ENSDLAG00005035005	ENSDLAG00005006546	ENSDLAG00005006318	ENSDLAG00005034960	plpbp (ENSDLAG00005006138)	tmed4 (ENSDLAG00005027237)	ENSDLAG00005006018
Large yellow croaker	MODERN SPECIES	487	porcnl (ENSLCRG00005021971)	MYT1 (ENSLCRG00005021923)	ENSLCRG00005021920	ENSLCRG00005021918	asxl1 (ENSLCRG00005021910)	ENSLCRG00005021909	mfn2 (ENSLCRG00005021864)	ENSLCRG00005021689	efhd2 (ENSLCRG00005021565)	ENSLCRG00005021556	tnnc1b (ENSLCRG00005021553)	tnnc1b (ENSLCRG00005021542)	dedd (ENSLCRG00005021516)	kcnab2b (ENSLCRG00005021512)	SLCO4A1 (ENSLCRG00005021507) #20	gata5 (ENSLCRG00005021474) #22	HCK (ENSLCRG00005020401)	tm9sf4 (ENSLCRG00005019815)	plagl2 (ENSLCRG00005019700)	pofut1 (ENSLCRG00005019697)	ENSLCRG00005019688	kif3b (ENSLCRG00005019673)	PCMTD2 (ENSLCRG00005019663)	MYT1 (ENSLCRG00005019604)	TBC1D22B (ENSLCRG00005019489)	snrpg (ENSLCRG00005019429)	plpbp (ENSLCRG00005019407)	tmed4 (ENSLCRG00005019365)	tmed4 (ENSLCRG00005019358)	ikbkg (ENSLCRG00005019345)	sephs3 (ENSLCRG00005019304)
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B	ENSGT00950000182945.b.a.a.a.b.b.c.b	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183042.b.a	ENSGT00940000156977.f	ENSGT00940000159659.d.a	ENSGT00990000203541.a.b.b.e.b	ENSGT00940000157877.a	ENSGT00940000166426	ENSGT00940000161090.B.c.b.a.a.a	ENSGT00940000161090.B.c.a.a	ENSGT00940000163961.a.a.a
Lumpfish	MODERN SPECIES	22	skia (ENSCLMG00005000147)	ENSCLMG00005000162	si:ch211-251b21.1 (ENSCLMG00005000200)	plch2a (ENSCLMG00005000378)	pex10 (ENSCLMG00005000580)	renbp (ENSCLMG00005000583)	ENSCLMG00005000601	dennd2da (ENSCLMG00005000603)	MTCH1 (ENSCLMG00005000614)	stk38a (ENSCLMG00005000627)	stk35 (ENSCLMG00005000630)	pdyn (ENSCLMG00005000635)	GMEB2 (ENSCLMG00005000637)	tpk2 (ENSCLMG00005000638)	ENSCLMG00005000641	gata5 (ENSCLMG00005000651) #22	ENSCLMG00005000654 #23	HCK (ENSCLMG00005000714)	tm9sf4 (ENSCLMG00005006255)	plagl2 (ENSCLMG00005007515)	pofut1 (ENSCLMG00005007517)	kif3b (ENSCLMG00005007518)	ENSCLMG00005007521	SLC41A3 (ENSCLMG00005007522)	KLF15 (ENSCLMG00005007525)	CPNE9 (ENSCLMG00005007529)	LHFPL4 (ENSCLMG00005007536)	ENSCLMG00005007556	zgc:171775 (ENSCLMG00005007582)	krt8 (ENSCLMG00005007585)	krt5 (ENSCLMG00005007587)
Stickleback	MODERN SPECIES	11	slc16a7 (ENSGACG00000003483)	ENSGACG00000003497	ENSGACG00000003501	NFASC (ENSGACG00000003505)	ENSGACG00000003535	ENSGACG00000003565	dennd2da (ENSGACG00000003580)	stk38a (ENSGACG00000003596)	MTCH1 (ENSGACG00000003602)	ENSGACG00000003612	stk35 (ENSGACG00000003613)	pdyn (ENSGACG00000003616)	GMEB2 (ENSGACG00000003620)	tpk2 (ENSGACG00000003625)	ENSGACG00000003630	gata5 (ENSGACG00000003649) #22	ENSGACG00000003654 #23	ENSGACG00000003657	HCK (ENSGACG00000003658)	tm9sf4 (ENSGACG00000003663)	plagl2 (ENSGACG00000003704)	pofut1 (ENSGACG00000003706)	kif3b (ENSGACG00000003708)	SLC41A3 (ENSGACG00000003711)	klf15 (ENSGACG00000003717)	CPNE9 (ENSGACG00000003721)	LHFPL4 (ENSGACG00000003739)	ENSGACG00000003742	ENSGACG00000003767	zgc:171775 (ENSGACG00000003777)	krt5 (ENSGACG00000003787)
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A	ENSGT00940000160139 #22	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.b	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Pike perch	MODERN SPECIES	7	dpm1 (ENSSLUG00000004871)	adnpb (ENSSLUG00000004864)	pard6b (ENSSLUG00000004861)	ARFGEF2 (ENSSLUG00000001182)	bcl2l1 (ENSSLUG00000000966)	cox4i2 (ENSSLUG00000000964)	FAM110A (ENSSLUG00000000961)	nsfl1c (ENSSLUG00000000959)	fkbp1ab (ENSSLUG00000000958)	sdcbp2 (ENSSLUG00000000957)	SNPH (ENSSLUG00000000955)	NTSR1 (ENSSLUG00000000953) #19	ENSSLUG00000000952	SLCO4A1 (ENSSLUG00000000938) #20	ENSSLUG00000000932	gata5 (ENSSLUG00000000925) #22	HCK (ENSSLUG00000000341)	tm9sf4 (ENSSLUG00000000099)	plagl2 (ENSSLUG00000017050)	pofut1 (ENSSLUG00000017041)	ENSSLUG00000017033	kif3b (ENSSLUG00000017017)	PCMTD2 (ENSSLUG00000017005)	MYT1 (ENSSLUG00000016915)	TBC1D22B (ENSSLUG00000015893)	ENSSLUG00000015849	snrpg (ENSSLUG00000015841)	plpbp (ENSSLUG00000015830)	tmed4 (ENSSLUG00000015797)	ikbkg (ENSSLUG00000015767)	tm2d2 (ENSSLUG00000015756)
Channel bull blenny	MODERN SPECIES	21	pard6b (ENSCGOG00000014515)	ARFGEF2 (ENSCGOG00000014537)	bcl2l1 (ENSCGOG00000015487)	ENSCGOG00000015490	cox4i2 (ENSCGOG00000015492)	FAM110A (ENSCGOG00000015494)	ENSCGOG00000015495	nsfl1c (ENSCGOG00000015499)	fkbp1ab (ENSCGOG00000015553)	sdcbp2 (ENSCGOG00000015588)	SNPH (ENSCGOG00000015695)	ENSCGOG00000015699	NTSR1 (ENSCGOG00000015702) #19	SLCO4A1 (ENSCGOG00000015709) #20	ENSCGOG00000015780	gata5 (ENSCGOG00000015782) #22	HCK (ENSCGOG00000015901)	tm9sf4 (ENSCGOG00000019036)	plagl2 (ENSCGOG00000020125)	pofut1 (ENSCGOG00000020138)	ENSCGOG00000020189	kif3b (ENSCGOG00000020192)	ENSCGOG00000020208	PCMTD2 (ENSCGOG00000020209)	ENSCGOG00000020211	TBC1D22B (ENSCGOG00000020228)	ENSCGOG00000020619	snrpg (ENSCGOG00000020620)	plpbp (ENSCGOG00000020621)	tmed4 (ENSCGOG00000020646)	ikbkg (ENSCGOG00000020664)
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000178928	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Oryzias	ANCESTRAL SPECIES	4	ENSGT00940000154285.a.a.c.b.b.a.b.a.a.a	ENSGT00940000154285.a.a.c.b.b.a.b.a.a.b	ENSGT00530000063489.b	ENSGT00510000048078	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00990000210396	ENSGT00940000164374.A.g	ENSGT00940000164374.A.h	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00940000154285.a.a.c.b.b.a.b.a.b.a	ENSGT00940000154285.a.a.c.b.b.a.b.a.a.a	ENSGT00940000154285.a.a.c.b.b.a.b.a.a.b.b	ENSGT00530000063489.b	ENSGT00510000048078	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g.d	ENSGT00940000164374.A.h	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Indian medaka	MODERN SPECIES	23	fkbp1ab (ENSOMEG00000009113)	sdcbp2 (ENSOMEG00000009126)	SNPH (ENSOMEG00000009147)	NTSR1 (ENSOMEG00000001003) #19	ENSOMEG00000009186	SLCO4A1 (ENSOMEG00000009213) #20	ENSOMEG00000009230	ENSOMEG00000009244	ENSOMEG00000009285	ENSOMEG00000009306	ENSOMEG00000000236	ENSOMEG00000009363	ENSOMEG00000009377	ENSOMEG00000009568	ENSOMEG00000009816	gata5 (ENSOMEG00000009884) #22	ENSOMEG00000009940 #23	HCK (ENSOMEG00000009994)	tm9sf4 (ENSOMEG00000010088)	plagl2 (ENSOMEG00000010123)	pofut1 (ENSOMEG00000010164)	klhl7 (ENSOMEG00000010186)	kif3b (ENSOMEG00000010213)	ENSOMEG00000010234	MYT1 (ENSOMEG00000010463)	TBC1D22B (ENSOMEG00000010558)	ENSOMEG00000010574	snrpg (ENSOMEG00000010583)	plpbp (ENSOMEG00000010622)	tmed4 (ENSOMEG00000010648)	ikbkg (ENSOMEG00000010755)
Javanese ricefish	MODERN SPECIES	21	lrrc47 (ENSOJAG00000010847)	slc35c2 (ENSOJAG00000010814)	ENSOJAG00000010802	FAM110A (ENSOJAG00000010799)	ENSOJAG00000010797	nsfl1c (ENSOJAG00000010771)	fkbp1ab (ENSOJAG00000010751)	sdcbp2 (ENSOJAG00000010745)	SNPH (ENSOJAG00000010727)	NTSR1 (ENSOJAG00000010713) #19	SLCO4A1 (ENSOJAG00000010653) #20	ENSOJAG00000010616	ENSOJAG00000010609	ENSOJAG00000010582	ENSOJAG00000010573	gata5 (ENSOJAG00000010551) #22	ENSOJAG00000010540	ENSOJAG00000010531	ENSOJAG00000010518 #23	HCK (ENSOJAG00000008197)	tm9sf4 (ENSOJAG00000007384)	plagl2 (ENSOJAG00000007333)	pofut1 (ENSOJAG00000007313)	klhl7 (ENSOJAG00000007072)	ENSOJAG00000007027	kif3b (ENSOJAG00000006992)	PCMTD2 (ENSOJAG00000006965)	MYT1 (ENSOJAG00000006598)	TBC1D22B (ENSOJAG00000006121)	ENSOJAG00000006065	snrpg (ENSOJAG00000006035)
Oryzias_a	ANCESTRAL SPECIES		ENSGT00940000154285.a.a.c.b.b.a.b.a.a.a	ENSGT00940000154285.a.a.c.b.b.a.b.a.a.b	ENSGT00530000063489.b	ENSGT00510000048078	ENSGT00390000012981.d	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g	ENSGT00940000164374.A.h	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Chinese medaka	MODERN SPECIES	230				ENSOSIG00000009113	slc35c2 (ENSOSIG00000009110)	taf13 (ENSOSIG00000009109)	FAM110A (ENSOSIG00000009108)	nsfl1c (ENSOSIG00000009107)	fkbp1ab (ENSOSIG00000009102)	sdcbp2 (ENSOSIG00000009097)	SNPH (ENSOSIG00000009092)	NTSR1 (ENSOSIG00000009087) #19	SLCO4A1 (ENSOSIG00000009084) #20	ENSOSIG00000009081	ENSOSIG00000009075	gata5 (ENSOSIG00000009071) #22	ENSOSIG00000009070 #23	HCK (ENSOSIG00000000624)	tm9sf4 (ENSOSIG00000000166)	plagl2 (ENSOSIG00000018702)	pofut1 (ENSOSIG00000018692)	kif3b (ENSOSIG00000018680)	PCMTD2 (ENSOSIG00000018675)	MYT1 (ENSOSIG00000018621)	TBC1D22B (ENSOSIG00000018369)	ENSOSIG00000018354	snrpg (ENSOSIG00000018352)	plpbp (ENSOSIG00000018345)	tmed4 (ENSOSIG00000018338)	ikbkg (ENSOSIG00000018324)	sephs3 (ENSOSIG00000018314)
Japanese Medaka HdrR	MODERN SPECIES	21	slc35c2 (ENSORLG00000002523)	TAF13 (ENSORLG00000029069)	FAM110A (ENSORLG00000002513)	nsfl1c (ENSORLG00000002498)	fkbp1ab (ENSORLG00000029721)	sdcbp2 (ENSORLG00000002449)	SNPH (ENSORLG00000026695)	NTSR1 (ENSORLG00000002419) #19	ENSORLG00000029167	SLCO4A1 (ENSORLG00000002407) #20	ENSORLG00000029701	ENSORLG00000022472	ENSORLG00000027741	ENSORLG00000002383	ENSORLG00000025432	gata5 (ENSORLG00000030387) #22	ENSORLG00000002376 #23	HCK (ENSORLG00000002368)	tm9sf4 (ENSORLG00000002348)	plagl2 (ENSORLG00000002338)	pofut1 (ENSORLG00000002329)	ENSORLG00000025817	kif3b (ENSORLG00000002305)	PCMTD2 (ENSORLG00000002280)	MYT1 (ENSORLG00000002252)	TBC1D22B (ENSORLG00000002203)	ENSORLG00000024620	snrpg (ENSORLG00000025456)	PROSC (ENSORLG00000002148)	tmed4 (ENSORLG00000002130)	ikbkg (ENSORLG00000002119)
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g.b	ENSGT00940000164374.A.g.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.c.b	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g.b	ENSGT00940000164374.A.g.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Poecilia	ANCESTRAL SPECIES	26	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.c.b	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g.b	ENSGT00940000164374.A.g.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198.o	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
NAME_6	ANCESTRAL SPECIES	179												ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g.b	ENSGT00940000164374.A.g.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198.o	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	495												NTSR1 (ENSPFOG00000015596) #19	SLCO4A1 (ENSPFOG00000015625) #20	ENSPFOG00000024049	ENSPFOG00000015692	gata5 (ENSPFOG00000015696) #22	ENSPFOG00000023832 #23	HCK (ENSPFOG00000015724)	tm9sf4 (ENSPFOG00000015806)	plagl2 (ENSPFOG00000015862)	pofut1 (ENSPFOG00000015874)	klhl7 (ENSPFOG00000015916)	kif3b (ENSPFOG00000015985)	ENSPFOG00000016011	MYT1 (ENSPFOG00000016047)	TBC1D22B (ENSPFOG00000016120)	snrpg (ENSPFOG00000016200)	plpbp (ENSPFOG00000016204)	tmed4 (ENSPFOG00000016236)	ikbkg (ENSPFOG00000016262)	sephs3 (ENSPFOG00000016280)
Amazon molly	MODERN SPECIES	109																gata5 (ENSPFOG00000008088) #22
Sailfin molly	MODERN SPECIES	490										MAP3K15 (ENSPLAG00000018168)	ENSPLAG00000018098	tlr22 (ENSPLAG00000018025)	tlr22 (ENSPLAG00000017920)	ENSPLAG00000017857	ENSPLAG00000017840	gata5 (ENSPLAG00000017804) #22
Guppy	MODERN SPECIES	459	dpm1 (ENSPREG00000004118)	adnpb (ENSPREG00000004249)	pard6b (ENSPREG00000004259)	ARFGEF2 (ENSPREG00000004286)	bcl2l1 (ENSPREG00000004394)	cox4i2 (ENSPREG00000004428)	ENSPREG00000004435	nsfl1c (ENSPREG00000004454)	ENSPREG00000004473	fkbp1ab (ENSPREG00000004479)	sdcbp2 (ENSPREG00000004494)	SNPH (ENSPREG00000004525)	NTSR1 (ENSPREG00000004554) #19	SLCO4A1 (ENSPREG00000004586) #20	ENSPREG00000004623	gata5 (ENSPREG00000004653) #22	HCK (ENSPREG00000004723)	tm9sf4 (ENSPREG00000005105)	plagl2 (ENSPREG00000005130)	pofut1 (ENSPREG00000005143)	klhl7 (ENSPREG00000005163)	kif3b (ENSPREG00000005196)	ENSPREG00000005221	PCMTD2 (ENSPREG00000005234)	MYT1 (ENSPREG00000005256)	ENSPREG00000005304	TBC1D22B (ENSPREG00000005317)	snrpg (ENSPREG00000005370)	plpbp (ENSPREG00000005413)	tmed4 (ENSPREG00000005427)	ikbkg (ENSPREG00000005446)
Platyfish	MODERN SPECIES		bcl2l1 (ENSXMAG00000026765)	cox4i2 (ENSXMAG00000016678)	FAM110A (ENSXMAG00000022812)	nsfl1c (ENSXMAG00000016691)	ENSXMAG00000019608	fkbp1ab (ENSXMAG00000016714)	sdcbp2 (ENSXMAG00000016717)	SNPH (ENSXMAG00000021139)	NTSR1 (ENSXMAG00000004154) #19	ENSXMAG00000022770	SLCO4A1 (ENSXMAG00000022051) #20	ENSXMAG00000025738	ENSXMAG00000029676	ENSXMAG00000024726	ENSXMAG00000023879	gata5 (ENSXMAG00000004186) #22	ENSXMAG00000028090 #23	ENSXMAG00000022775	HCK (ENSXMAG00000004194)	tm9sf4 (ENSXMAG00000004229)	plagl2 (ENSXMAG00000029671)	pofut1 (ENSXMAG00000004262)	kif3b (ENSXMAG00000004280)	ENSXMAG00000027045	PCMTD2 (ENSXMAG00000004296)	ENSXMAG00000027801	TBC1D22B (ENSXMAG00000004320)	ENSXMAG00000028023	snrpg (ENSXMAG00000004353)	plpbp (ENSXMAG00000004354)	tmed4 (ENSXMAG00000004360)
NAME_4	ANCESTRAL SPECIES	145																ENSGT00940000160139 #22	ENSGT00940000158738.f	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Mummichog	MODERN SPECIES	2388																gata5 (ENSFHEG00000014334) #22	HCK (ENSFHEG00000014226)	ENSFHEG00000012422	tm9sf4 (ENSFHEG00000012405)	tm9sf4 (ENSFHEG00000012293)	plagl2 (ENSFHEG00000012270)	pofut1 (ENSFHEG00000012240)	kif3b (ENSFHEG00000012217)	PCMTD2 (ENSFHEG00000012167)	MYT1 (ENSFHEG00000012145)	TBC1D22B (ENSFHEG00000012072)	SNRPG (ENSFHEG00000012063)	plpbp (ENSFHEG00000012049)	tmed4 (ENSFHEG00000012012)	ikbkg (ENSFHEG00000011981)	sephs3 (ENSFHEG00000011966)
Sheepshead minnow	MODERN SPECIES	1833																gata5 (ENSCVAG00000019374) #22
Aplocheiloidei	ANCESTRAL SPECIES		ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a
Mangrove rivulus	MODERN SPECIES	197	dpm1 (ENSKMAG00000017799)	adnpb (ENSKMAG00000017774)	pard6b (ENSKMAG00000017759)	ARFGEF2 (ENSKMAG00000017651)	bcl2l1 (ENSKMAG00000017613)	cox4i2 (ENSKMAG00000017594)	FAM110A (ENSKMAG00000017580)	nsfl1c (ENSKMAG00000017532)	fkbp1ab (ENSKMAG00000017512)	sdcbp2 (ENSKMAG00000017492)	SNPH (ENSKMAG00000017460)	NTSR1 (ENSKMAG00000017439) #19	ENSKMAG00000017424	SLCO4A1 (ENSKMAG00000017360) #20	ENSKMAG00000017344	gata5 (ENSKMAG00000017318) #22	ENSKMAG00000017302 #23	HCK (ENSKMAG00000017277)	tm9sf4 (ENSKMAG00000017241)	plagl2 (ENSKMAG00000017225)
Turquoise killifish	MODERN SPECIES	300														ENSNFUG00015023451	ENSNFUG00015023449	gata5 (ENSNFUG00015023447) #22
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000178928	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000164374.A.g	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Pomacentridae	ANCESTRAL SPECIES	91	ENSGT00940000154307.D	ENSGT00940000160722	ENSGT00940000158956.c.k.a	ENSGT00940000160351	ENSGT00940000158208.a.a	ENSGT00940000155330.b	ENSGT01040000240451.a.b.a	ENSGT01050000244940.a.a	ENSGT00530000063607.a	ENSGT00940000155808	ENSGT00940000159544	ENSGT00390000002944	ENSGT00950000183188.A.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Pomacentridae_A	ANCESTRAL SPECIES	90	ENSGT00940000156890.a.b	ENSGT00940000154307.D	ENSGT00940000160722	ENSGT00940000158956.c.k.a	ENSGT00940000160351	ENSGT00940000158208.a.a	ENSGT00940000155330.b	ENSGT01040000240451.a.b.a	ENSGT01050000244940.a.a	ENSGT00530000063607.a	ENSGT00940000155808	ENSGT00940000159544	ENSGT00390000002944	ENSGT00950000183188.A.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Amphiprion	ANCESTRAL SPECIES	75	ENSGT00940000154307.D	ENSGT00940000160722	ENSGT00940000158956.c.k.a	ENSGT00940000160351	ENSGT00940000158208.a.a	ENSGT00940000155330.b	ENSGT01040000240451.a.b.a	ENSGT01050000244940.a.a	ENSGT00530000063607.a	ENSGT00940000155808	ENSGT00940000159544	ENSGT00390000002944	ENSGT00950000183188.A.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Orange clownfish	MODERN SPECIES	22	gpr182 (ENSAPEG00000016114)	ENSAPEG00000016120	agap2 (ENSAPEG00000016168)	tspan31 (ENSAPEG00000016316)	MARCHF9 (ENSAPEG00000016342)	SLC11A2 (ENSAPEG00000016358)	ctdsp2 (ENSAPEG00000016417)	TMBIM6 (ENSAPEG00000016442)	ENSAPEG00000016486	kansl2 (ENSAPEG00000016543)	ccnt1 (ENSAPEG00000016595)	sarnp (ENSAPEG00000016710)	pmelb (ENSAPEG00000016723)	tuba1c (ENSAPEG00000016751)	tuba1b (ENSAPEG00000016766)	gata5 (ENSAPEG00000016792) #22	ENSAPEG00000016813	HCK (ENSAPEG00000016838)	ENSAPEG00000016882	tm9sf4 (ENSAPEG00000016893)	plagl2 (ENSAPEG00000016968)	pofut1 (ENSAPEG00000016991)	kif3b (ENSAPEG00000017047)	PCMTD2 (ENSAPEG00000017093)	ENSAPEG00000017130	ENSAPEG00000017141	TBC1D22B (ENSAPEG00000017187)	ENSAPEG00000017245	snrpg (ENSAPEG00000017249)	plpbp (ENSAPEG00000017265)	tmed4 (ENSAPEG00000017297)
Clown anemonefish	MODERN SPECIES	360																gata5 (ENSAOCG00000021455) #22
Spiny chromis	MODERN SPECIES	508												sarnp (ENSAPOG00000005247)	pmelb (ENSAPOG00000005368)	ENSAPOG00000005391	ENSAPOG00000005400	gata5 (ENSAPOG00000005416) #22	HCK (ENSAPOG00000005487)	tm9sf4 (ENSAPOG00000005575)	plagl2 (ENSAPOG00000005615)	pofut1 (ENSAPOG00000005669)	kif3b (ENSAPOG00000005691)
Bicolor damselfish	MODERN SPECIES	1329								kansl2 (ENSSPAG00000013035)	ccnt1 (ENSSPAG00000013078)	ENSSPAG00000013096	ENSSPAG00000013110	pmelb (ENSSPAG00000013119)	ENSSPAG00000013160	ENSSPAG00000013166	ENSSPAG00000013177	gata5 (ENSSPAG00000013188) #22	ENSSPAG00000013239 #23	HCK (ENSSPAG00000013270)	tm9sf4 (ENSSPAG00000013312)
Cichlidae	ANCESTRAL SPECIES		ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000178928	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a.b	ENSGT01060000248556.A.a.a.a.b.a.b.j	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00510000048078	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a.b	ENSGT01060000248556.A.a.a.a.b.a.b.j	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	17	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT00970000194534	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a.b	ENSGT01060000248556.A.a.a.a.b.a.b.j	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Haplochromini	ANCESTRAL SPECIES	18	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT00970000194534	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00940000158738	ENSGT00940000157198.t.a	ENSGT00940000157198.s	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a.b	ENSGT01060000248556.A.a.a.a.b.a.b.j	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a
Haplochromini_A	ANCESTRAL SPECIES	36	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT00970000194534	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00940000158738	ENSGT00940000157198.s	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a.b	ENSGT01060000248556.A.a.a.a.b.a.b.j	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
P. nyererei	MODERN SPECIES	574																gata5 (ENSPNYG00000008158) #22	HCK (ENSPNYG00000008185)	tm9sf4 (ENSPNYG00000008234)	plagl2 (ENSPNYG00000008290)	pofut1 (ENSPNYG00000008322)	crata (ENSPNYG00000008437)	kif3b (ENSPNYG00000008721)	PCMTD2 (ENSPNYG00000008751)	MYT1 (ENSPNYG00000008802)	TBC1D22B (ENSPNYG00000008875)	snrpg (ENSPNYG00000008962)	plpbp (ENSPNYG00000008980)	tmed4 (ENSPNYG00000009011)	ikbkg (ENSPNYG00000009039)
Haplochromini_B	ANCESTRAL SPECIES	57	ENSGT00940000154923.C.x.b	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00940000164901	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT00970000194534	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00940000158738	ENSGT00940000157198.s	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000155602.r.a.b	ENSGT01060000248556.A.a.a.a.b.a.b.j	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Eastern happy	MODERN SPECIES	12	ENSACLG00000006951	ENSACLG00000006947	sdcbp2 (ENSACLG00000006938)	SNPH (ENSACLG00000006916)	ENSACLG00000006912	ENSACLG00000006905	ENSACLG00000006897	ENSACLG00000006889	NTSR1 (ENSACLG00000006863) #19	ENSACLG00000006850	SLCO4A1 (ENSACLG00000006818) #20	ENSACLG00000006805	ENSACLG00000006798	ENSACLG00000006726	ENSACLG00000006723	gata5 (ENSACLG00000006714) #22	HCK (ENSACLG00000006685)	tm9sf4 (ENSACLG00000006645)	ENSACLG00000006637	plagl2 (ENSACLG00000006625)	pofut1 (ENSACLG00000006613)	klhl7 (ENSACLG00000006581)	crata (ENSACLG00000006545)	kif3b (ENSACLG00000006525)	PCMTD2 (ENSACLG00000006501)	MYT1 (ENSACLG00000006368)	TBC1D22B (ENSACLG00000006330)	snrpg (ENSACLG00000006323)	plpbp (ENSACLG00000006312)	ENSACLG00000006307	tmed4 (ENSACLG00000006301)
Zebra mbuna	MODERN SPECIES	20														ENSMZEG00005022137	ENSMZEG00005022138	gata5 (ENSMZEG00005022142) #22	HCK (ENSMZEG00005022146)	tm9sf4 (ENSMZEG00005022157)	plagl2 (ENSMZEG00005022163)	pofut1 (ENSMZEG00005022170)	klhl7 (ENSMZEG00005022175)	crata (ENSMZEG00005022179)	kif3b (ENSMZEG00005022185)	PCMTD2 (ENSMZEG00005022189)	MYT1 (ENSMZEG00005022199)	TBC1D22B (ENSMZEG00005022225)	snrpg (ENSMZEG00005022235)	plpbp (ENSMZEG00005022238)	tmed4 (ENSMZEG00005022243)	ikbkg (ENSMZEG00005022250)	sephs3 (ENSMZEG00005022255)
Burton s mouthbrooder	MODERN SPECIES	905																gata5 (ENSHBUG00000014094) #22	HCK (ENSHBUG00000014137)	tm9sf4 (ENSHBUG00000014191)
Lyretail cichlid	MODERN SPECIES	404	dpm1 (ENSNBRG00000020446)	adnpb (ENSNBRG00000020439)	pard6b (ENSNBRG00000020433)	ARFGEF2 (ENSNBRG00000020356)	bcl2l1 (ENSNBRG00000020345)	cox4i2 (ENSNBRG00000020340)	FAM110A (ENSNBRG00000020328)	nsfl1c (ENSNBRG00000020284)	ENSNBRG00000020267	sdcbp2 (ENSNBRG00000020233)	SNPH (ENSNBRG00000020209)	NTSR1 (ENSNBRG00000020181) #19	ENSNBRG00000020170	SLCO4A1 (ENSNBRG00000020146) #20	ENSNBRG00000020071	gata5 (ENSNBRG00000020028) #22	HCK (ENSNBRG00000020008)	tm9sf4 (ENSNBRG00000019978)	plagl2 (ENSNBRG00000019964)	pofut1 (ENSNBRG00000019948)	klhl7 (ENSNBRG00000019935)
Nile tilapia	MODERN SPECIES	12	pard6b (ENSONIG00000001625)	ARFGEF2 (ENSONIG00000001628)	bcl2l1 (ENSONIG00000001632)	cox4i2 (ENSONIG00000027721)	FAM110A (ENSONIG00000029169)	nsfl1c (ENSONIG00000001637)	fkbp1ab (ENSONIG00000038643)	sdcbp2 (ENSONIG00000001641)	SNPH (ENSONIG00000029652)	las1l (ENSONIG00000001644)	las1l (ENSONIG00000037488)	NTSR1 (ENSONIG00000012097) #19	ENSONIG00000034610	SLCO4A1 (ENSONIG00000012098) #20	ENSONIG00000039997	gata5 (ENSONIG00000000458) #22	HCK (ENSONIG00000000464)	tm9sf4 (ENSONIG00000000465)	ENSONIG00000031323	plagl2 (ENSONIG00000000473)	ENSONIG00000039223	pofut1 (ENSONIG00000000474)	klhl7 (ENSONIG00000000478)	crata (ENSONIG00000000481)	kif3b (ENSONIG00000000490)	ENSONIG00000034834	PCMTD2 (ENSONIG00000000493)	MYT1 (ENSONIG00000000499)	TBC1D22B (ENSONIG00000000505)	ENSONIG00000034703	snrpg (ENSONIG00000041430)
Midas cichlid	MODERN SPECIES	1839																gata5 (ENSACIG00000014692) #22	HCK (ENSACIG00000013564)
Cod	MODERN SPECIES		ENSGMOG00000024809	ENSGMOG00000025852	ENSGMOG00000035691	ENSGMOG00000028698	ENSGMOG00000022950	ENSGMOG00000026088	ENSGMOG00000037158	ENSGMOG00000019137	ENSGMOG00000026865	ENSGMOG00000031239	ENSGMOG00000025840	fkbp1ab (ENSGMOG00000003078)	ENSGMOG00000003091	ENSGMOG00000031098	SLCO4A1 (ENSGMOG00000007021) #20	gata5 (ENSGMOG00000003817) #22	ENSGMOG00000027544 #23	HCK (ENSGMOG00000018342)	tm9sf4 (ENSGMOG00000018361)	plagl2 (ENSGMOG00000031773)	pofut1 (ENSGMOG00000018410)	kif3b (ENSGMOG00000018429)	ENSGMOG00000006335	ENSGMOG00000006265	ENSGMOG00000029041	ENSGMOG00000006225	ENSGMOG00000006193	ENSGMOG00000006177	ENSGMOG00000006144	ENSGMOG00000006132	ENSGMOG00000023762
Protacanthopterygii	ANCESTRAL SPECIES	73	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000177261	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000157472	ENSGT00940000167283.a	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00390000004735.C
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	89	ENSGT00390000012981.a	ENSGT00940000153769.G	ENSGT00940000153481.B.f.a	ENSGT00530000063631.b.n.b.a.b	ENSGT00950000183211.a.a.a.fb	ENSGT00940000158950.m	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00390000002407.c.i.a.a	ENSGT00950000183056.B.a.h.a	ENSGT00520000055567.a.a.a.r	ENSGT00940000153311.a.a.b.d	ENSGT00940000164997.d	ENSGT00520000055634.b.a.d	ENSGT01100000263518.A.a.a.a.c #19	ENSGT01080000257410.C.f #20	ENSGT00940000160139.i #22	ENSGT00530000063835.a.e #23	ENSGT00940000158738.d	ENSGT00390000012490.e	ENSGT00940000159291.o.b	ENSGT00940000159291.p	ENSGT00940000169392	ENSGT00940000154513.A	ENSGT00970000197149.a	ENSGT00530000065390.f	ENSGT00390000007643.l	ENSGT00940000162075.db.a	ENSGT00940000163056.d	ENSGT01090000260154	ENSGT00940000155360.A.c	ENSGT00940000157635.b
Huchen	MODERN SPECIES	17	ENSHHUG00000004815	ENSHHUG00000004814	efhd2 (ENSHHUG00000004794)	fhad1 (ENSHHUG00000004785)	ela2 (ENSHHUG00000004765)	ela2l (ENSHHUG00000004752)	TMEM51 (ENSHHUG00000004747)	kazna (ENSHHUG00000004731)	rimkla (ENSHHUG00000004724)	zmynd12 (ENSHHUG00000004716)	emp3b (ENSHHUG00000004703)	ENSHHUG00000004688	znf362b (ENSHHUG00000004672)	alas2 (ENSHHUG00000004484)	ENSHHUG00000004465	gata5 (ENSHHUG00000004445) #22	ENSHHUG00000004438 #23	HCK (ENSHHUG00000003899)	ENSHHUG00000003894	mthfr (ENSHHUG00000003738)	ENSHHUG00000003731	ENSHHUG00000003715	ENSHHUG00000003698	ENSHHUG00000003687	ENSHHUG00000003635	ENSHHUG00000003629	ENSHHUG00000003611	nppal (ENSHHUG00000003598)	si:dkeyp-104h9.5 (ENSHHUG00000003590)	ENSHHUG00000003463	her9 (ENSHHUG00000003439)
Salmoninae_a	ANCESTRAL SPECIES	14	ENSGT00390000012981.a	ENSGT00940000153769.G	ENSGT00940000153481.B.f.a	ENSGT00530000063631.b.n.b.a.b	ENSGT00950000183211.a.a.a.fb	ENSGT00940000158950.m	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00390000002407.c.i.a.a	ENSGT00950000183056.B.a.h.a	ENSGT00520000055567.a.a.a.r	ENSGT00940000153311.a.a.b.d	ENSGT00940000164997.d	ENSGT00520000055634.b.a.d	ENSGT01100000263518.A.a.a.a.c #19	ENSGT01080000257410.C.f #20	ENSGT00940000160139.i #22	ENSGT00530000063835.a.e #23	ENSGT00940000158738.d	ENSGT00390000012490.e	ENSGT00940000159291.o.b	ENSGT00940000159291.p	ENSGT00940000169392	ENSGT00940000154513.A.d	ENSGT00970000197149.a	ENSGT00530000065390.f	ENSGT00390000007643.l	ENSGT00940000156971.B.a.c.a	ENSGT00940000162075.db.a	ENSGT00940000163056.d	ENSGT01090000260154	ENSGT00940000155360.A.c
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00390000012981.a	ENSGT00940000153769.G	ENSGT00940000153481.B.f.a	ENSGT00530000063631.b.n.b.a.b	ENSGT00950000183211.a.a.a.fb	ENSGT00940000158950.m	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00390000002407.c.i.a.a	ENSGT00950000183056.B.a.h.a	ENSGT00520000055567.a.a.a.r	ENSGT00940000153311.a.a.b.d	ENSGT00940000164997.d	ENSGT00520000055634.b.a.d	ENSGT01100000263518.A.a.a.a.c #19	ENSGT01080000257410.C.f #20	ENSGT00940000160139.i #22	ENSGT00530000063835.a.e #23	ENSGT00940000158738.d	ENSGT00390000012490.e	ENSGT00940000159291.o.b	ENSGT00940000159291.p	ENSGT00940000169392	ENSGT00940000154513.A.d	ENSGT00970000197149.a	ENSGT00530000065390.f	ENSGT00390000007643.l	ENSGT00940000156971.B.a.c.a	ENSGT00940000163056.d	ENSGT01090000260154	ENSGT00940000155360.A.c	ENSGT00940000157635.b
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000008466	dpm1 (ENSOMYG00000013883)	adnpb (ENSOMYG00000013829)	pard6b (ENSOMYG00000057570)	ENSOMYG00000009630	bcl2l1 (ENSOMYG00000008424)	ENSOMYG00000075782	cox4i2 (ENSOMYG00000008357)	ENSOMYG00000008307	nsfl1c (ENSOMYG00000008262)	fkbp1ab (ENSOMYG00000008236)	sdcbp2 (ENSOMYG00000008116)	SNPH (ENSOMYG00000008025)	NTSR1 (ENSOMYG00000007977) #19	SLCO4A1 (ENSOMYG00000007867) #20	gata5 (ENSOMYG00000007576) #22	ENSOMYG00000007559 #23	ENSOMYG00000007353	MTHFR (ENSOMYG00000006954)	ENSOMYG00000006531	ENSOMYG00000006511	ENSOMYG00000006498	ENSOMYG00000006478	nppal (ENSOMYG00000006428)	KIAA2013 (ENSOMYG00000006399)	ENSOMYG00000006184	her9 (ENSOMYG00000005729)	ENSOMYG00000005701	ENSOMYG00000052911	ENSOMYG00000005650	KLHL17 (ENSOMYG00000005545)
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00390000012981.a	ENSGT00940000153769.G	ENSGT00940000153481.B.f.a	ENSGT00530000063631.b.n.b.a.b	ENSGT00950000183211.a.a.a.fb	ENSGT00940000158950.m	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00390000002407.c.i.a.a	ENSGT00950000183056.B.a.h.a	ENSGT00520000055567.a.a.a.r	ENSGT00940000153311.a.a.b.d	ENSGT00940000164997.d	ENSGT00520000055634.b.a.d	ENSGT01100000263518.A.a.a.a.c #19	ENSGT01080000257410.C.f #20	ENSGT00940000160139.i #22	ENSGT00530000063835.a.e #23	ENSGT00940000158738.d	ENSGT00390000012490.e	ENSGT00940000159291.o.b	ENSGT00940000159291.p	ENSGT00940000169392	ENSGT00940000154513.A.d	ENSGT00970000197149.a	ENSGT00530000065390.f	ENSGT00390000007643.l	ENSGT00940000156971.B.a.c.a	ENSGT00940000163056.d	ENSGT01090000260154	ENSGT00940000155360.A.c	ENSGT00940000157635.b
Chinook salmon	MODERN SPECIES	7	ENSOTSG00005010445	dpm1 (ENSOTSG00005010434)	adnpb (ENSOTSG00005010433)	pard6b (ENSOTSG00005010432)	ARFGEF2 (ENSOTSG00005009593)	bcl2l1 (ENSOTSG00005009579)	cox4i2 (ENSOTSG00005009576)	cox4i2 (ENSOTSG00005009573)	FAM110A (ENSOTSG00005009570)	nsfl1c (ENSOTSG00005009568)	fkbp1ab (ENSOTSG00005009567)	sdcbp2 (ENSOTSG00005009566)	SNPH (ENSOTSG00005009565)	NTSR1 (ENSOTSG00005009563) #19	SLCO4A1 (ENSOTSG00005009544) #20	gata5 (ENSOTSG00005009536) #22	ENSOTSG00005009535 #23	ENSOTSG00005004473	mthfr (ENSOTSG00005001962)	ENSOTSG00005001925	nppb (ENSOTSG00005001920)	ENSOTSG00005001917	nppal (ENSOTSG00005001914)	si:dkeyp-104h9.5 (ENSOTSG00005001912)	ENSOTSG00005001909	her9 (ENSOTSG00005001884)	ENSOTSG00005001877	ENSOTSG00005001867	KLHL17 (ENSOTSG00005001801)	noc2l (ENSOTSG00005045410)	SAMD11 (ENSOTSG00005045407)
Coho salmon	MODERN SPECIES	8	ENSOKIG00005032713	dpm1 (ENSOKIG00005032660)	adnpb (ENSOKIG00005032648)	pard6b (ENSOKIG00005032639)	ARFGEF2 (ENSOKIG00005031915)	bcl2l1 (ENSOKIG00005031838)	ENSOKIG00005031830	cox4i2 (ENSOKIG00005031796)	FAM110A (ENSOKIG00005031787)	nsfl1c (ENSOKIG00005031732)	fkbp1ab (ENSOKIG00005031682)	sdcbp2 (ENSOKIG00005031638)	SNPH (ENSOKIG00005031628)	NTSR1 (ENSOKIG00005031620) #19	SLCO4A1 (ENSOKIG00005031515) #20	gata5 (ENSOKIG00005031477) #22	ENSOKIG00005031454 #23	ENSOKIG00005027500	mthfr (ENSOKIG00005027067)	ENSOKIG00005027032	ENSOKIG00005027000	ENSOKIG00005026970	nppb (ENSOKIG00005026947)	ENSOKIG00005026924	nppal (ENSOKIG00005026909)	si:dkeyp-104h9.5 (ENSOKIG00005026901)	MEGF6 (ENSOKIG00005026848)	her9 (ENSOKIG00005026808)	ENSOKIG00005026796	ENSOKIG00005026730	KLHL17 (ENSOKIG00005026702)
Salmo	ANCESTRAL SPECIES	16	ENSGT00510000048078.c	ENSGT00940000153481.B.f.a	ENSGT00530000063631.b.n.b.a.a.a	ENSGT00530000063631.b.n.b.a.a.b	ENSGT00950000183211.a.a.a.fb	ENSGT00940000158950.m	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00390000002407.c.i.a.a	ENSGT00950000183056.B.a.h.a	ENSGT00520000055567.a.a.a.r	ENSGT00940000153311.a.a.b.d	ENSGT00940000164997.d	ENSGT00520000055634.b.a.d	ENSGT01100000263518.A.a.a.a.c #19	ENSGT01080000257410.C.f #20	ENSGT00940000160139.i #22	ENSGT00530000063835.a.e #23	ENSGT00940000158738.d	ENSGT00390000012490.e	ENSGT00940000159291.o.b	ENSGT00940000169392	ENSGT00940000154513.A.d	ENSGT00970000197149.a	ENSGT00530000065390.f	ENSGT00390000007643.l	ENSGT00940000156971.B.a.c.a	ENSGT00940000162075.db.a	ENSGT00940000163056.d	ENSGT01090000260154	ENSGT00940000155360.A.c	ENSGT00940000157635.b
River trout	MODERN SPECIES	20	slc35c2 (ENSSTUG00000032285)	dpm1 (ENSSTUG00000032328)	adnpb (ENSSTUG00000032577)	ENSSTUG00000032608	pard6b (ENSSTUG00000032613)	ARFGEF2 (ENSSTUG00000032656)	bcl2l1 (ENSSTUG00000034849)	cox4i2 (ENSSTUG00000034867)	FAM110A (ENSSTUG00000034894)	nsfl1c (ENSSTUG00000034899)	fkbp1ab (ENSSTUG00000034908)	sdcbp2 (ENSSTUG00000034955)	SNPH (ENSSTUG00000034987)	NTSR1 (ENSSTUG00000035008) #19	SLCO4A1 (ENSSTUG00000035025) #20	gata5 (ENSSTUG00000035211) #22	ENSSTUG00000035226 #23	ENSSTUG00000035272	mthfr (ENSSTUG00000036166)	ENSSTUG00000036212	ENSSTUG00000036215	nppb (ENSSTUG00000036314)	ENSSTUG00000036317	nppal (ENSSTUG00000036322)	si:dkeyp-104h9.5 (ENSSTUG00000036330)	MEGF6 (ENSSTUG00000036350)	her9 (ENSSTUG00000036507)	ENSSTUG00000036534	ENSSTUG00000036545	KLHL17 (ENSSTUG00000036612)	noc2l (ENSSTUG00000036663)
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000008159	ENSSSAG00000097729	pard6b (ENSSSAG00000105221)	arfgef2 (ENSSSAG00000007235)	cox4i2 (ENSSSAG00000007137)	bcl2l1 (ENSSSAG00000120738)	cox4i2 (ENSSSAG00000117776)	ENSSSAG00000103544	nsfl1c (ENSSSAG00000118708)	fkb1a (ENSSSAG00000088596)	sdcbp2 (ENSSSAG00000007056)	SNPH (ENSSSAG00000096547)	NTSR1 (ENSSSAG00000007030) #19	ENSSSAG00000083828	SLCO4A1 (ENSSSAG00000006763) #20	gata5 (ENSSSAG00000109623) #22	ENSSSAG00000006709 #23	ENSSSAG00000006566	ENSSSAG00000122038	MTHFR (ENSSSAG00000006434)	ENSSSAG00000103662	ENSSSAG00000006341	ENSSSAG00000105832	nppal (ENSSSAG00000006309)	KIAA2013 (ENSSSAG00000121109)	ENSSSAG00000006276	ENSSSAG00000005932	ENSSSAG00000110750	her9 (ENSSSAG00000090792)	ENSSSAG00000069232	ENSSSAG00000069227
Salmoninae	ANCESTRAL SPECIES	305	ENSGT00950000183211.a.a.a.gb	ENSGT00940000158950.n	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00390000002407.c.i.b	ENSGT00950000183056.B.a.h.b	ENSGT00520000055567.a.a.a.q.b	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b.c	ENSGT00940000164997.c	ENSGT00520000055634.b.a.c	ENSGT01100000263518.A.a.a.a.d #19	ENSGT01100000263723	ENSGT01080000257410.C.e #20	ENSGT00940000164374.A.k.b	ENSGT00530000063725.p.d	ENSGT00940000160139.j #22	ENSGT00530000063835.a.f #23	ENSGT00940000158738.c	ENSGT00940000157198.y	ENSGT00940000164771.a.e	ENSGT00390000015634.j	ENSGT00940000153739.a.a.g	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a.a.b	ENSGT00940000156364.a.a.d	ENSGT00940000157472.e.a.a
Salmoninae_a	ANCESTRAL SPECIES	26	ENSGT00950000183211.a.a.a.gb	ENSGT00940000158950.n	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00390000002407.c.i.b	ENSGT00950000183056.B.a.h.b	ENSGT00520000055567.a.a.a.q.b	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b.c	ENSGT00940000164997.c	ENSGT00520000055634.b.a.c	ENSGT01100000263518.A.a.a.a.d #19	ENSGT01100000263723	ENSGT01080000257410.C.e #20	ENSGT00940000164374.A.k.b	ENSGT00530000063725.p.d	ENSGT00940000160139.j #22	ENSGT00530000063835.a.f #23	ENSGT00940000158738.c	ENSGT00940000157198.y	ENSGT00940000164771.a.e	ENSGT00390000015634.j	ENSGT00940000153739.a.a.g	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a.a.b	ENSGT00940000156364.a.a.d	ENSGT00940000157472.e.a.a	ENSGT00940000167283.a.d	ENSGT00510000046985.o.d	ENSGT00510000046985.o.c.a.b	ENSGT00390000004928.y	ENSGT00940000159012.g
Salmo	ANCESTRAL SPECIES	4	ENSGT00950000183211.a.a.a.gb	ENSGT00940000158950.n	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00390000002407.c.i.b	ENSGT00950000183056.B.a.h.b	ENSGT00520000055567.a.a.a.q.a.a	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b.c	ENSGT00940000164997.c	ENSGT00520000055634.b.a.c	ENSGT01100000263518.A.a.a.a.d #19	ENSGT01100000263723	ENSGT01080000257410.C.e #20	ENSGT00940000164374.A.k.b	ENSGT00530000063725.p.d	ENSGT00940000160139.j #22	ENSGT00530000063835.a.f #23	ENSGT00940000158738.c	ENSGT00940000157198.y	ENSGT00940000164771.a.e	ENSGT00390000015634.j	ENSGT00940000153739.a.a.g	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a.a.b	ENSGT00940000156364.a.a.d	ENSGT00940000157472.e.a.a	ENSGT00940000167283.a.d	ENSGT00510000046985.o.d	ENSGT00390000004928.y	ENSGT00940000159012.g	ENSGT00940000156669.a
River trout	MODERN SPECIES	23	bcl2l1 (ENSSTUG00000034465)	cox4i2 (ENSSTUG00000034482)	ENSSTUG00000034520	ENSSTUG00000034526	nsfl1c (ENSSTUG00000034537)	ENSSTUG00000034563	nsfl1c (ENSSTUG00000034634)	fkbp1ab (ENSSTUG00000034658)	sdcbp2 (ENSSTUG00000034670)	SNPH (ENSSTUG00000034692)	NTSR1 (ENSSTUG00000034718) #19	SLCO4A1 (ENSSTUG00000034780) #20	ENSSTUG00000034916	ENSSTUG00000034921	ENSSTUG00000034929	gata5 (ENSSTUG00000034946) #22	ENSSTUG00000034958 #23	HCK (ENSSTUG00000035017)	tm9sf4 (ENSSTUG00000037093)	plagl2 (ENSSTUG00000037199)	ENSSTUG00000037212	kif3b (ENSSTUG00000037248)	ENSSTUG00000037277	ENSSTUG00000037283	ENSSTUG00000037288	TBC1D22B (ENSSTUG00000037300)	ENSSTUG00000037624	snrpg (ENSSTUG00000037628)	plpbp (ENSSTUG00000037644)	tmed4 (ENSSTUG00000037680)	ENSSTUG00000037720
Atlantic salmon	MODERN SPECIES	4	cox4i2 (ENSSSAG00000063792)	ENSSSAG00000081919	ENSSSAG00000087171	ENSSSAG00000063773	nsfl1c (ENSSSAG00000106914)	mfsd2 (ENSSSAG00000063720)	fkbp1ab (ENSSSAG00000063706)	sdcbp2 (ENSSSAG00000063667)	SNPH (ENSSSAG00000091280)	NTSR1 (ENSSSAG00000114572) #19	ENSSSAG00000063642	SLCO4A1 (ENSSSAG00000063615) #20	ENSSSAG00000063608	ENSSSAG00000063601	ENSSSAG00000063586	gata5 (ENSSSAG00000087389) #22	ENSSSAG00000063568 #23	HCK (ENSSSAG00000053065)	tm9sf4 (ENSSSAG00000050778)	plagl2 (ENSSSAG00000104563)	pofut1 (ENSSSAG00000048714)	kif3b (ENSSSAG00000048639)	ENSSSAG00000113516	ENSSSAG00000046146	ENSSSAG00000090781	ENSSSAG00000046219	ENSSSAG00000099913	snrpg (ENSSSAG00000048092)	plpbp (ENSSSAG00000048122)	tmed4 (ENSSSAG00000068451)	ENSSSAG00000048269
Oncorhynchus	ANCESTRAL SPECIES	7	ENSGT00530000063631.b.n.b.b	ENSGT00950000183211.a.a.a.gb	ENSGT00940000158950.n	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00390000002407.c.i.b	ENSGT00950000183056.B.a.h.b	ENSGT00520000055567.a.a.a.q.b	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b.c	ENSGT00940000164997.c	ENSGT00520000055634.b.a.c	ENSGT01100000263518.A.a.a.a.d #19	ENSGT01080000257410.C.e #20	ENSGT00940000164374.A.k.b	ENSGT00530000063725.p.d	ENSGT00940000160139.j #22	ENSGT00530000063835.a.f #23	ENSGT00940000158738.c	ENSGT00940000157198.y	ENSGT00940000164771.a.e	ENSGT00390000015634.j	ENSGT00940000153739.a.a.g	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a.a.b	ENSGT00940000156364.a.a.d	ENSGT00940000157472.e.a.a	ENSGT00940000167283.a.d	ENSGT00510000046985.o.c.a.b	ENSGT00390000004928.y	ENSGT00940000159012.g	ENSGT01000000221579
Rainbow trout	MODERN SPECIES	7	ENSOMYG00000043321	ENSOMYG00000069488	nsfl1c (ENSOMYG00000043332)	ENSOMYG00000005460	fkbp1ab (ENSOMYG00000005519)	sdcbp2 (ENSOMYG00000005692)	SNPH (ENSOMYG00000068941)	NTSR1 (ENSOMYG00000005938) #19	ENSOMYG00000054782	ENSOMYG00000065730	SLCO4A1 (ENSOMYG00000074202) #20	ENSOMYG00000065454	ENSOMYG00000009580	ENSOMYG00000009603	ENSOMYG00000075239	gata5 (ENSOMYG00000006035) #22	ENSOMYG00000058884 #23	HCK (ENSOMYG00000007383)	tm9sf4 (ENSOMYG00000008847)	plagl2 (ENSOMYG00000074223)	ENSOMYG00000059636	kif3b (ENSOMYG00000008913)	ENSOMYG00000008932	ENSOMYG00000061175	ENSOMYG00000009024	ENSOMYG00000057674	ENSOMYG00000009418	ENSOMYG00000009311	ENSOMYG00000009326	snrpg (ENSOMYG00000009296)	plpbp (ENSOMYG00000009277)
Oncorhynchus_a	ANCESTRAL SPECIES	9	ENSGT00530000063631.b.n.b.b	ENSGT00950000183211.a.a.a.gb	ENSGT00940000158950.n	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00390000002407.c.i.b	ENSGT00950000183056.B.a.h.b	ENSGT00520000055567.a.a.a.q.b	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b.c	ENSGT00940000164997.c	ENSGT00520000055634.b.a.c	ENSGT01100000263518.A.a.a.a.d #19	ENSGT01080000257410.C.e #20	ENSGT00940000164374.A.k.b	ENSGT00530000063725.p.d	ENSGT00940000160139.j #22	ENSGT00940000158738.c	ENSGT00940000157198.y	ENSGT00940000164771.a.e	ENSGT00390000015634.j	ENSGT00940000153739.a.a.g	ENSGT00950000183032.A.b.b.b.a.a.a.b	ENSGT00940000156364.a.a.d	ENSGT00940000157472.e.a.a	ENSGT00940000167283.a.d	ENSGT00510000046985.o.c.a.b	ENSGT00390000004928.y	ENSGT00940000159012.g	ENSGT01000000221579	ENSGT00940000156669.a	ENSGT00940000166975.d
Coho salmon	MODERN SPECIES	16	ENSOKIG00005036966	cox4i2 (ENSOKIG00005036989)	ENSOKIG00005037027	nsfl1c (ENSOKIG00005037040)	ENSOKIG00005037070	fkbp1ab (ENSOKIG00005037137)	sdcbp2 (ENSOKIG00005037115)	SNPH (ENSOKIG00005037125)	NTSR1 (ENSOKIG00005037138) #19	ENSOKIG00005037144 #20	ENSOKIG00005037157	ENSOKIG00005037164	ENSOKIG00005037244	ENSOKIG00005037270	ENSOKIG00005037304	gata5 (ENSOKIG00005037314) #22	HCK (ENSOKIG00005037504)	tm9sf4 (ENSOKIG00005040214)	plagl2 (ENSOKIG00005040789)	ENSOKIG00005040811	pofut1 (ENSOKIG00005040830)	kif3b (ENSOKIG00005040991)	ENSOKIG00005041021	ENSOKIG00005041035	PCMTD2 (ENSOKIG00005041047)	MYT1 (ENSOKIG00005041103)	ENSOKIG00005041646	TBC1D22B (ENSOKIG00005041670)	ENSOKIG00005042098	snrpg (ENSOKIG00005042109)	plpbp (ENSOKIG00005042169)
Chinook salmon	MODERN SPECIES	14	adnpb (ENSOTSG00005016960)	pard6b (ENSOTSG00005016962)	ARFGEF2 (ENSOTSG00005016970)	bcl2l1 (ENSOTSG00005017010)	cox4i2 (ENSOTSG00005017011)	FAM110A (ENSOTSG00005017013)	nsfl1c (ENSOTSG00005017014)	ENSOTSG00005017016	fkbp1ab (ENSOTSG00005017020)	sdcbp2 (ENSOTSG00005017029)	SNPH (ENSOTSG00005017031)	NTSR1 (ENSOTSG00005002847) #19	SLCO4A1 (ENSOTSG00005003255) #20	ENSOTSG00005003257	ENSOTSG00005003259	gata5 (ENSOTSG00005003264) #22	HCK (ENSOTSG00005003314)	tm9sf4 (ENSOTSG00005007014)	plagl2 (ENSOTSG00005007294)	pofut1 (ENSOTSG00005007295)	ENSOTSG00005007298	ENSOTSG00005007300	ENSOTSG00005007302	TBC1D22B (ENSOTSG00005007307)	ENSOTSG00005007865	snrpg (ENSOTSG00005007866)	plpbp (ENSOTSG00005007868)	tmed4 (ENSOTSG00005007873)	ENSOTSG00005007875	ENSOTSG00005007876	srpk1a (ENSOTSG00005007877)
Huchen	MODERN SPECIES	7888																gata5 (ENSHHUG00000021038) #22
Northern pike	MODERN SPECIES	11	dpm1 (ENSELUG00000010212)	adnpb (ENSELUG00000010188)	pard6b (ENSELUG00000010175)	ARFGEF2 (ENSELUG00000010151)	bcl2l1 (ENSELUG00000010095)	cox4i2 (ENSELUG00000010050)	ENSELUG00000029904	FAM110A (ENSELUG00000009881)	nsfl1c (ENSELUG00000009866)	ENSELUG00000009795	fkbp1ab (ENSELUG00000009735)	sdcbp2 (ENSELUG00000009535)	SNPH (ENSELUG00000009486)	NTSR1 (ENSELUG00000009446) #19	SLCO4A1 (ENSELUG00000009414) #20	gata5 (ENSELUG00000009306) #22	ENSELUG00000009279 #23	HCK (ENSELUG00000009250)	mthfr (ENSELUG00000009206)	CLCN6 (ENSELUG00000009140)	nppa (ENSELUG00000009047)	ENSELUG00000009021	nppal (ENSELUG00000008985)	si:dkeyp-104h9.5 (ENSELUG00000008903)	foxl2l (ENSELUG00000008881)	her9 (ENSELUG00000008872)	ENSELUG00000028064	ENSELUG00000008848	ENSELUG00000031783	ENSELUG00000008721	noc2l (ENSELUG00000008668)
Otomorpha	ANCESTRAL SPECIES	35	ENSGT00940000162989.f.a.b	ENSGT00940000156659	ENSGT00940000154098.b	ENSGT00530000063320.A.j	ENSGT00980000202345	ENSGT00940000165936	ENSGT00940000153675.a.b.b	ENSGT00940000159408	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997.b	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000163127	ENSGT00940000160661	ENSGT00390000009883	ENSGT00940000160391	ENSGT00940000159974	ENSGT01070000253766.B.f.b
Clupeiformes	ANCESTRAL SPECIES	7	ENSGT00940000157024.k.b	ENSGT00940000162989.f.a.b	ENSGT00940000156659	ENSGT00940000154098.b	ENSGT00530000063320.A.j	ENSGT00980000202345	ENSGT00940000165936	ENSGT00940000153675.a.b.b	ENSGT00940000159408	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997.b	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000163127	ENSGT00940000173560.a	ENSGT00940000160391	ENSGT00940000159974.a	ENSGT01070000253766.B.f.a	ENSGT00390000016168.b
Atlantic herring	MODERN SPECIES	20	MAGI1 (ENSCHAG00000025774)	rho (ENSCHAG00000025873)	ENSCHAG00000025875	ENSCHAG00000025879	ENSCHAG00000025886	ENSCHAG00000025895	qars1 (ENSCHAG00000026024)	espn (ENSCHAG00000026767)	HES2 (ENSCHAG00000026775)	hes2.2 (ENSCHAG00000026777)	acot7 (ENSCHAG00000026796)	GPR153 (ENSCHAG00000026905)	her3 (ENSCHAG00000026907)	ENSCHAG00000026909	ENSCHAG00000026911	gata5 (ENSCHAG00000026919) #22	HCK (ENSCHAG00000026993)	tm9sf4 (ENSCHAG00000027468)	plagl2 (ENSCHAG00000027476)	pofut1 (ENSCHAG00000027477)	kif3b (ENSCHAG00000027480)	ENSCHAG00000027483	PCMTD2 (ENSCHAG00000027484)	MYT1 (ENSCHAG00000027487)	ENSCHAG00000027500	NPBWR2 (ENSCHAG00000027501)	oprl1 (ENSCHAG00000027504)	ENSCHAG00000027505	ENSCHAG00000027506	ENSCHAG00000027508	rgs19 (ENSCHAG00000027509)
Denticle herring	MODERN SPECIES	1	ENSDCDG00000014685	pm20d1.2 (ENSDCDG00000014598)	lemd1 (ENSDCDG00000014593)	mfsd4ab (ENSDCDG00000014588)	ENSDCDG00000014587	ENSDCDG00000014580	ENSDCDG00000014562	fbxo44.7 (ENSDCDG00000014551)	ENSDCDG00000014547	fkbp1ab (ENSDCDG00000014544)	sdcbp2 (ENSDCDG00000014539)	SNPH (ENSDCDG00000014535)	ENSDCDG00000014531	NTSR1 (ENSDCDG00000014529) #19	SLCO4A1 (ENSDCDG00000014505) #20	gata5 (ENSDCDG00000029979) #22	ENSDCDG00000029975 #23	HCK (ENSDCDG00000027892)	tm9sf4 (ENSDCDG00000027694)	plagl2 (ENSDCDG00000027686)	pofut1 (ENSDCDG00000027685)	kif3b (ENSDCDG00000027678)	PCMTD2 (ENSDCDG00000027675)	MYT1 (ENSDCDG00000027649)	NPBWR2 (ENSDCDG00000027639)	oprl1 (ENSDCDG00000027637)	ENSDCDG00000027636	ENSDCDG00000027634	rgs19 (ENSDCDG00000027632)	tcea2 (ENSDCDG00000027626)	ENSDCDG00000027622
Otophysi	ANCESTRAL SPECIES	51	ENSGT00940000161518	ENSGT00940000164033	ENSGT00940000157729	ENSGT00390000012419	ENSGT00940000156928	ENSGT00490000043329.b	ENSGT00940000153675.a.b.b	ENSGT00940000159408	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997.b	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000163127.b.a.b	ENSGT00940000160661	ENSGT00390000009883	ENSGT00940000160391.f	ENSGT00940000159974	ENSGT01070000253766.B.f.a
Characiphysae	ANCESTRAL SPECIES	5	ENSGT00940000180163	ENSGT00940000157729	ENSGT00390000012419	ENSGT00940000156928	ENSGT00940000166923	ENSGT00940000153675.a.b.b	ENSGT00940000159408	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997.b	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00530000063725.p	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000163127.b.a.b	ENSGT00940000160661	ENSGT00390000009883	ENSGT00940000160391.f	ENSGT00940000159974	ENSGT01070000253766.B.f.a.c	ENSGT00390000016168.b.w
Channel catfish	MODERN SPECIES	6	nol4l (ENSIPUG00000011449)	commd7 (ENSIPUG00000011293)	dnmt3bb.1 (ENSIPUG00000011108)	ENSIPUG00000011078	ENSIPUG00000011028	ube2t (ENSIPUG00000010988)	zgc:194242 (ENSIPUG00000010973)	fbxo44.7 (ENSIPUG00000010934)	ENSIPUG00000010849	sdcbp2 (ENSIPUG00000010793)	snph (ENSIPUG00000010779)	NTSR1 (ENSIPUG00000010753) #19	ENSIPUG00000010742	slco4a1 (ENSIPUG00000010663) #20	ENSIPUG00000010650	gata5-a (ENSIPUG00000010604) #22	rbbp8nl (ENSIPUG00000010580) #23	HCK (ENSIPUG00000010530)	tm9sf4 (ENSIPUG00000010476)	plagl2 (ENSIPUG00000010440)	Pofut1 (ENSIPUG00000010399)	kif3b (ENSIPUG00000010360)	ENSIPUG00000010350	pcmtd2 (ENSIPUG00000010331)	MYT1 (ENSIPUG00000010235)	NPBWR2 (ENSIPUG00000010220)	oprl1 (ENSIPUG00000010202)	ENSIPUG00000010183	rgs19 (ENSIPUG00000010127)	tcea2 (ENSIPUG00000010069)	ENSIPUG00000009165
Characiphysae_b	ANCESTRAL SPECIES	41	ENSGT00940000180163	ENSGT00940000157729	ENSGT00390000012419	ENSGT00940000156928	ENSGT00940000166923	ENSGT00940000153675.a.b.b	ENSGT00940000159408	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997.b	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00530000063725.p	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000163127.b.a.b	ENSGT00940000163127.b.b	ENSGT00940000160661	ENSGT00390000009883	ENSGT00940000160391.f	ENSGT00940000159974	ENSGT01070000253766.B.f.a.c
Characoidei	ANCESTRAL SPECIES	51	ENSGT00940000157729	ENSGT00390000012419	ENSGT00940000156928	ENSGT00940000166923	ENSGT00940000153675.a.b.b	ENSGT00940000159408.l	ENSGT00940000159408.k	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997.b	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00530000063725.p	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a	ENSGT00940000163127.b.a.b	ENSGT00940000160661	ENSGT00390000009883	ENSGT00940000160391.f	ENSGT00940000159974	ENSGT01070000253766.B.f.a.c	ENSGT00390000016168.b.w
Red-bellied piranha	MODERN SPECIES	379																gata5 (ENSPNAG00000009127) #22	ENSPNAG00000009137 #23	HCK (ENSPNAG00000009153)	tm9sf4 (ENSPNAG00000009215)	ENSPNAG00000009228	plagl2 (ENSPNAG00000009241)	pofut1 (ENSPNAG00000009269)	kif3b (ENSPNAG00000009298)	PCMTD2 (ENSPNAG00000009325)	MYT1 (ENSPNAG00000009411)
Mexicana tetra	MODERN SPECIES	6	fbxo44.7 (ENSAMXG00000019871)	ENSAMXG00000038950	ENSAMXG00000019911	fkbp1ab (ENSAMXG00000036550)	sdcbp2 (ENSAMXG00000003567)	ENSAMXG00000039027	NTSR1 (ENSAMXG00000003510) #19	ENSAMXG00000035049	SLCO4A1 (ENSAMXG00000003400) #20	ENSAMXG00000030995	ENSAMXG00000037414	ENSAMXG00000040174	ENSAMXG00000026094	ENSAMXG00000040392	ENSAMXG00000037009	gata5 (ENSAMXG00000031119) #22	ENSAMXG00000003140 #23	HCK (ENSAMXG00000036151)	ENSAMXG00000038605	tm9sf4 (ENSAMXG00000002735)	plagl2 (ENSAMXG00000002660)	pofut1 (ENSAMXG00000002563)	kif3b (ENSAMXG00000002528)	PCMTD2 (ENSAMXG00000002506)	MYT1 (ENSAMXG00000002473)	ENSAMXG00000041831	NPBWR2 (ENSAMXG00000026093)	oprl1 (ENSAMXG00000036124)	LKAAEAR1 (ENSAMXG00000043421)	rgs19 (ENSAMXG00000002442)	tcea2 (ENSAMXG00000002373)
Electric eel	MODERN SPECIES	104	nol4lb (ENSEEEG00000006812)	commd7 (ENSEEEG00000006815)	dnmt3bb.1 (ENSEEEG00000006819)	dnmt3bb.2 (ENSEEEG00000006830)	ENSEEEG00000006974	fbxo44.7 (ENSEEEG00000006996)	ENSEEEG00000006998	ENSEEEG00000007003	fkbp1ab (ENSEEEG00000007005)	sdcbp2 (ENSEEEG00000007008)	SNPH (ENSEEEG00000007009)	NTSR1 (ENSEEEG00000007010) #19	ENSEEEG00000007012	SLCO4A1 (ENSEEEG00000007015) #20	ENSEEEG00000007018	gata5 (ENSEEEG00000007020) #22	HCK (ENSEEEG00000007150)	tm9sf4 (ENSEEEG00000010944)	plagl2 (ENSEEEG00000011492)	pofut1 (ENSEEEG00000011494)	kif3b (ENSEEEG00000011500)	PCMTD2 (ENSEEEG00000011504)	MYT1 (ENSEEEG00000011507)
Cyprinoidei	ANCESTRAL SPECIES		ENSGT00940000164033	ENSGT00940000157729	ENSGT00390000012419	ENSGT00940000156928	ENSGT00940000166923	ENSGT00940000163568	ENSGT00940000159408.o.a	ENSGT00940000159408.o.b.a	ENSGT00390000005318.b.a.g	ENSGT00940000153311.a.a.b	ENSGT00940000164997.b	ENSGT00520000055634.b.a	ENSGT01100000263518.A.a.a.a #19	ENSGT01100000263723	ENSGT01080000257410.C #20	ENSGT00940000160139 #22	ENSGT00530000063835.a #23	ENSGT00940000158738	ENSGT00940000157198	ENSGT00940000164771.a	ENSGT00390000015634	ENSGT00940000153739.a.a	ENSGT00940000177261	ENSGT00950000183032.A.b.b.b.a.a	ENSGT00940000156364.a.a.a	ENSGT00940000163127.b.a.a	ENSGT00940000160661	ENSGT00940000160391.f	ENSGT00940000159974	ENSGT00940000156694	ENSGT01070000253766.B.f.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	315	ENSGT00390000009113.c.c.b	ENSGT00390000009113.c.c.a.a	ENSGT00940000161218.j.a	ENSGT00940000164033	ENSGT00940000157729.d.a	ENSGT00390000012419.r	ENSGT00940000156928.t	ENSGT00940000166923.x	ENSGT00940000159408.o.a	ENSGT00390000005318.b.a.g.b	ENSGT00940000153311.a.a.b.a.a	ENSGT00940000164997.b.b	ENSGT00520000055634.b.a.b	ENSGT01100000263518.A.a.a.a.i.b #19	ENSGT01080000257410.C.a #20	ENSGT00940000160139.k #22	ENSGT00530000063835.a.d #23	ENSGT00940000159408.o.b.a.c	ENSGT00940000158738.b	ENSGT00940000157198.n	ENSGT00940000164771.a.b	ENSGT00390000015634.d	ENSGT00940000177261	ENSGT00940000153739.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.p	ENSGT00940000156364.a.a.a.a	ENSGT00940000163127.b.a.b	ENSGT00940000160661.o.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2324																gata5 (ENSCARG00000051708) #22	ENSCARG00000051742 #23	HCK (ENSCARG00000051806)	tm9sf4 (ENSCARG00000052670)	plagl2 (ENSCARG00000052948)	kif3b (ENSCARG00000052962)	ENSCARG00000053033	PCMTD2 (ENSCARG00000053048)	MYT1 (ENSCARG00000053074)	NPBWR2 (ENSCARG00000053177)	oprl1 (ENSCARG00000053185)
Goldfish	MODERN SPECIES	265																gata5 (ENSCARG00000064799) #22
Cyprininae_a	ANCESTRAL SPECIES	421							ENSGT00940000166923.x	ENSGT00940000159408.o.a	ENSGT00940000159408.o.b.a.c	ENSGT00390000005318.b.a.g.b	ENSGT00940000153311.a.a.b.a.a	ENSGT00940000164997.b.b	ENSGT00520000055634.b.a.b	ENSGT01100000263518.A.a.a.a.i.b #19	ENSGT01080000257410.C.a #20	ENSGT00940000160139.k #22	ENSGT00530000063835.a.d #23	ENSGT00940000158738.b	ENSGT00940000157198.n	ENSGT00940000164771.a.b	ENSGT00390000015634.d	ENSGT00940000177261	ENSGT00940000153739.a.a.a	ENSGT00950000183032.A.b.b.b.a.a.p	ENSGT00940000156364.a.a.a.a	ENSGT00940000163127.b.a.a.b	ENSGT00940000160661.o.a
Common carp reference	MODERN SPECIES	11	ENSCCRG00000070915	ENSCCRG00000002724	cdc42l2 (ENSCCRG00000015460)	ENSCCRG00000015463	ENSCCRG00000073215	ENSCCRG00000051271	ENSCCRG00000058138	ENSCCRG00000006183	fkbp1ab (ENSCCRG00000056138)	sdcbp2 (ENSCCRG00000011931)	ENSCCRG00000006228	NTSR1 (ENSCCRG00000082695) #19	ENSCCRG00000081146	ENSCCRG00000045292	SLCO4A1 (ENSCCRG00000045280) #20	gata5 (ENSCCRG00000055114) #22	ENSCCRG00000023999 #23	HCK (ENSCCRG00000024012)	tm9sf4 (ENSCCRG00000027895)	plagl2 (ENSCCRG00000060902)	pofut1 (ENSCCRG00000018825)	ENSCCRG00000078323	ENSCCRG00000076924	MYT1 (ENSCCRG00000014035)	ENSCCRG00000057707	ENSCCRG00000053803	NPBWR2 (ENSCCRG00000056401)	ENSCCRG00000080932	ENSCCRG00000068636	oprl1 (ENSCCRG00000060454)	ENSCCRG00000061319
Golden-line barbel	MODERN SPECIES	685							ENSSGRG00000043278	ENSSGRG00000043314	ENSSGRG00000043318	ENSSGRG00000043374	fkbp1ab (ENSSGRG00000043376)	sdcbp2 (ENSSGRG00000043387)	ENSSGRG00000043388	NTSR1 (ENSSGRG00000043389) #19	SLCO4A1 (ENSSGRG00000043390) #20	gata5 (ENSSGRG00000043424) #22	HCK (ENSSGRG00000043428)	tm9sf4 (ENSSGRG00000043465)	plagl2 (ENSSGRG00000044588)	pofut1 (ENSSGRG00000044590)	kif3b (ENSSGRG00000044592)	PCMTD2 (ENSSGRG00000044596)	ENSSGRG00000044615	NPBWR2 (ENSSGRG00000044637)	ENSSGRG00000044638
Cyprininae	ANCESTRAL SPECIES	114	ENSGT00940000157729.d.b	ENSGT00390000012419.q	ENSGT00940000156928.s	ENSGT00940000166923.w	ENSGT00940000163568	ENSGT00940000159408.o.b.a.d	ENSGT00390000005318.b.a.g.a.b	ENSGT00390000005318.b.a.g.a.a	ENSGT00940000153311.a.a.b.b	ENSGT00940000164997.b.a.a	ENSGT00520000055634.b.a.a	ENSGT00940000165908.a	ENSGT01100000263518.A.a.a.a.i.a #19	ENSGT01100000263723.a.b	ENSGT01080000257410.C.b #20	ENSGT00940000160139.l #22	ENSGT00530000063835.a.c #23	ENSGT00940000158738.a	ENSGT00940000157198.m	ENSGT00940000164771.a.a	ENSGT00390000015634.c	ENSGT00940000153739.a.a.b	ENSGT00950000183032.A.b.b.b.a.a.q	ENSGT00940000156364.a.a.a.b	ENSGT00940000163127.b.a.a.a.a	ENSGT00940000160661.o.b	ENSGT00940000160391.f.b	ENSGT00940000159974.c	ENSGT00940000156694.n.b.b	ENSGT01070000253766.B.f.a.b	ENSGT00390000016168.b.u.a
Goldfish	MODERN SPECIES	15	commd7 (ENSCARG00000005290)	dnmt3bb.1 (ENSCARG00000004081)	ENSCARG00000022879	cdc42l2 (ENSCARG00000022830)	ENSCARG00000022705	ENSCARG00000022695	ENSCARG00000022650	ENSCARG00000022640	fkbp1ab (ENSCARG00000022634)	sdcbp2 (ENSCARG00000022625)	ENSCARG00000022615	ENSCARG00000022605	NTSR1 (ENSCARG00000022598) #19	ENSCARG00000022592	SLCO4A1 (ENSCARG00000022569) #20	gata5 (ENSCARG00000022548) #22	ENSCARG00000022540 #23	HCK (ENSCARG00000018406)	tm9sf4 (ENSCARG00000017690)	plagl2 (ENSCARG00000017639)	pofut1 (ENSCARG00000017625)	kif3b (ENSCARG00000017587)	PCMTD2 (ENSCARG00000017571)	MYT1 (ENSCARG00000017394)	NPBWR2 (ENSCARG00000017357)	oprl1 (ENSCARG00000017347)	rgs19 (ENSCARG00000017337)	tcea2 (ENSCARG00000017299)	ENSCARG00000017290	ENSCARG00000017284	xkr7b (ENSCARG00000017268)
Cyprininae_a	ANCESTRAL SPECIES	69	ENSGT00940000157729.d.b	ENSGT00390000012419.q	ENSGT00940000156928.s	ENSGT00940000166923.w	ENSGT00940000163568	ENSGT00940000159408.o.b.a.d	ENSGT00390000005318.b.a.g.a.b	ENSGT00390000005318.b.a.g.a.a	ENSGT00940000153311.a.a.b.b	ENSGT00940000164997.b.a.a	ENSGT00520000055634.b.a.a	ENSGT00940000165908.a	ENSGT01100000263518.A.a.a.a.i.a #19	ENSGT01100000263723.a.b	ENSGT01080000257410.C.b #20	ENSGT00940000160139.l #22	ENSGT00530000063835.a.c #23	ENSGT00940000158738.a	ENSGT00940000157198.m	ENSGT00940000164771.a.a	ENSGT00390000015634.c	ENSGT00940000153739.a.a.b	ENSGT00950000183032.A.b.b.b.a.a.q	ENSGT00940000156364.a.a.a.b	ENSGT00940000163127.b.a.a.a.a	ENSGT00940000160661.o.b	ENSGT00940000160391.f.b	ENSGT00940000159974.c	ENSGT00940000156694.n.b.a	ENSGT00940000159974.d.b	ENSGT00940000156694.m
Common carp reference	MODERN SPECIES	49	commd7 (ENSCCRG00000045166)	ENSCCRG00000006493	cdc42l2 (ENSCCRG00000007868)	ENSCCRG00000000993	ENSCCRG00000068199	ENSCCRG00000033314	ENSCCRG00000006187	ENSCCRG00000064803	fkbp1ab (ENSCCRG00000079183)	sdcbp2 (ENSCCRG00000006215)	ENSCCRG00000012005	ENSCCRG00000051194	NTSR1 (ENSCCRG00000012061) #19	ENSCCRG00000058491	SLCO4A1 (ENSCCRG00000012072) #20	gata5 (ENSCCRG00000075107) #22	ENSCCRG00000026944 #23	HCK (ENSCCRG00000026958)	tm9sf4 (ENSCCRG00000067991)	plagl2 (ENSCCRG00000082482)	pofut1 (ENSCCRG00000029205)	kif3b (ENSCCRG00000064228)	ENSCCRG00000068966	MYT1 (ENSCCRG00000029216)	ENSCCRG00000061585	NPBWR2 (ENSCCRG00000059227)	oprl1 (ENSCCRG00000059650)	rgs19 (ENSCCRG00000056632)	tcea2 (ENSCCRG00000017822)	ENSCCRG00000017830	ENSCCRG00000056780
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	635																gata5 (ENSSGRG00000021751) #22	ENSSGRG00000021749 #23	HCK (ENSSGRG00000018116)	tm9sf4 (ENSSGRG00000017222)	plagl2 (ENSSGRG00000017206)	pofut1 (ENSSGRG00000017181)	kif3b (ENSSGRG00000017154)	PCMTD2 (ENSSGRG00000017151)	ENSSGRG00000017148	MYT1 (ENSSGRG00000017147)	dcun1d3 (ENSSGRG00000017146)	NPBWR2 (ENSSGRG00000017145)	oprl1 (ENSSGRG00000017143)
Golden-line barbel	MODERN SPECIES	340	commd7 (ENSSGRG00000040690)	dnmt3bb.1 (ENSSGRG00000040533)	ENSSGRG00000040515	ENSSGRG00000040512	cdc42l2 (ENSSGRG00000040406)	ENSSGRG00000040373	ENSSGRG00000040371	ENSSGRG00000040370	ENSSGRG00000040364	fkbp1ab (ENSSGRG00000040363)	sdcbp2 (ENSSGRG00000040362)	ENSSGRG00000040361	NTSR1 (ENSSGRG00000040358) #19	ENSSGRG00000040357	SLCO4A1 (ENSSGRG00000040308) #20	gata5 (ENSSGRG00000040305) #22
Zebrafish	MODERN SPECIES	15	mipb (ENSDARG00000013963)	ENSDARG00000103927	baz2a (ENSDARG00000102974)	ptges3b (ENSDARG00000089626)	p4htma (ENSDARG00000071233)	ENSDARG00000110967	ENSDARG00000071235	ENSDARG00000095864	ENSDARG00000071238	trim35-39 (ENSDARG00000071241)	ENSDARG00000058738	ENSDARG00000090179	edem2 (ENSDARG00000028448)	prpf6 (ENSDARG00000091367)	SLCO4A1 (ENSDARG00000075948) #20	gata5 (ENSDARG00000017821) #22	ENSDARG00000087032 #23	HCK (ENSDARG00000058647)	tm9sf4 (ENSDARG00000002536)	plagl2 (ENSDARG00000076657)	pofut1 (ENSDARG00000008953)	kif3b (ENSDARG00000101120)	PCMTD2 (ENSDARG00000104883)	MYT1 (ENSDARG00000102879)	oprl1 (ENSDARG00000071209)	rgs19 (ENSDARG00000077385)	tcea2 (ENSDARG00000012927)	ENSDARG00000058598	xkr7b (ENSDARG00000026333)	CCM2L (ENSDARG00000063089)	ENSDARG00000017154 ##24
Spotted gar	MODERN SPECIES	656	ENSLOCG00000006171	ENSLOCG00000006159	ENSLOCG00000006150	tpx2 (ENSLOCG00000006128)	bcl2l1 (ENSLOCG00000006112)	cox4i2 (ENSLOCG00000006091)	FAM110A (ENSLOCG00000006076)	nsfl1c (ENSLOCG00000006055)	mfsd2al2 (ENSLOCG00000006039)	fkbp1aa (ENSLOCG00000006019)	ENSLOCG00000005990	SNPH (ENSLOCG00000005971)	rad21l1 (ENSLOCG00000005965)	NTSR1 (ENSLOCG00000005946) #19	SLCO4A1 (ENSLOCG00000005933) #20	gata5 (ENSLOCG00000005910) #22	ENSLOCG00000005890 #23	HCK (ENSLOCG00000005873)	tm9sf4 (ENSLOCG00000005859)	plagl2 (ENSLOCG00000005839)	pofut1 (ENSLOCG00000005824)	kif3b (ENSLOCG00000005800)	asxl1 (ENSLOCG00000005771)	nol4lb (ENSLOCG00000005753)	commd7 (ENSLOCG00000005720)	dnmt3bb.1 (ENSLOCG00000005701)	dnmt3ba (ENSLOCG00000005655)	mapre1a (ENSLOCG00000005626)	ENSLOCG00000005610	ENSLOCG00000005596	acss2 (ENSLOCG00000005576)
Reedfish	MODERN SPECIES	1	ENSECRG00000010519	ENSECRG00000010620	ctbs (ENSECRG00000010655)	SPATA1 (ENSECRG00000010664)	gng5 (ENSECRG00000010670)	rpf1 (ENSECRG00000010678)	ENSECRG00000010687	DNASE2B (ENSECRG00000010698)	uox (ENSECRG00000010715)	samd13 (ENSECRG00000010732)	prkacbb (ENSECRG00000010778)	ASF1A (ENSECRG00000010850)	ttll7 (ENSECRG00000010855)	ENSECRG00000010862	ADGRL2 (ENSECRG00000010912)	gata5 (ENSECRG00000011030) #22	ENSECRG00000011051 #23	HCK (ENSECRG00000011059)	tm9sf4 (ENSECRG00000011076)	plagl2 (ENSECRG00000011097)	pofut1 (ENSECRG00000011101)	kif3b (ENSECRG00000011105)	nol4lb (ENSECRG00000011110)	commd7 (ENSECRG00000011117)	dnmt3bb.1 (ENSECRG00000011126)	ENSECRG00000011169	mapre1a (ENSECRG00000011238)	snai1b (ENSECRG00000011271)	samhd1 (ENSECRG00000011287)	gss (ENSECRG00000011336)	gss (ENSECRG00000011403)
Elephant shark	MODERN SPECIES	1491	L3MBTL1 (ENSCMIG00000015926)	srsf6a (ENSCMIG00000015921)	ENSCMIG00000015914	aar2 (ENSCMIG00000015906)	DLGAP4 (ENSCMIG00000015900)	ENSCMIG00000015893	ENSCMIG00000015891	myl12.1 (ENSCMIG00000015846)	ENSCMIG00000015795	EMILIN3 (ENSCMIG00000015772)	rpn2 (ENSCMIG00000015623)	ENSCMIG00000015562	manbal (ENSCMIG00000015559)	NTSR1 (ENSCMIG00000015551) #19	SLCO4A1 (ENSCMIG00000015549) #20	gata5 (ENSCMIG00000015548) #22	ENSCMIG00000015545 #23	CABLES2 (ENSCMIG00000015542) #24	rps21 (ENSCMIG00000015530) #25	PLTP (ENSCMIG00000015525)	ube2c (ENSCMIG00000015518)	DNTTIP1 (ENSCMIG00000015514)	pcif1 (ENSCMIG00000015497)	bmp7a (ENSCMIG00000015490)	eapp (ENSCMIG00000015488)	ENSCMIG00000015482	ENSCMIG00000015477	ENSCMIG00000015476	ENSCMIG00000015474	GPR42 (ENSCMIG00000015473)	ENSCMIG00000015471