Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Glires	ANCESTRAL SPECIES	1	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629 #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629 #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00950000183160.A #21	ENSGT00390000008848 #22	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b	ENSGT01080000257365.b.a.b.a.b
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629.c #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00950000183160.A #21	ENSGT00390000008848 #22	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b	ENSGT01080000257365.b.a.b.a.b
Eurasian red squirrel	MODERN SPECIES	2	EI24 (ENSSVLG00005017492) #7	ENSSVLG00005017870 #8	ENSSVLG00005018204 #9	ACRV1 (ENSSVLG00005018355) #10	ENSSVLG00005018441 #11	ENSSVLG00005018489 #12	ENSSVLG00005018542 #13	ENSSVLG00005018577 #14	ENSSVLG00005018628 #15	ENSSVLG00005018662 #16	ENSSVLG00005018759 #17	PATE1 (ENSSVLG00005018811) #18	PATE2 (ENSSVLG00005018933) #19	PATE3 (ENSSVLG00005019015) #20	PUS3 (ENSSVLG00005019054) #21	HYLS1 (ENSSVLG00005019099) #22	DDX25 (ENSSVLG00005019148) #23	ENSSVLG00005019300 #24	ENSSVLG00005019361 #25	VSIG10L2 (ENSSVLG00005019476) #26	CDON (ENSSVLG00005019551) #27	ENSSVLG00005019624 #28	RPUSD4 (ENSSVLG00005019658) #29	FAM118B (ENSSVLG00005019758) #30	SRPRA (ENSSVLG00005019885) #31	FOXRED1 (ENSSVLG00005020162) #32	TIRAP (ENSSVLG00005020272) #33	DCPS (ENSSVLG00005020312) #34	ST3GAL4 (ENSSVLG00005020349) #35	KIRREL3 (ENSSVLG00005020503) #36	ETS1 (ENSSVLG00005020912) #37
Marmotini	ANCESTRAL SPECIES	20	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00950000183160.A #21	ENSGT00390000008848 #22	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b	ENSGT01080000257365.b.a.b.a.b
Marmotini_b	ANCESTRAL SPECIES	75	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00950000183160.A #21	ENSGT00390000008848 #22	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT01100000266206	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Squirrel	MODERN SPECIES	172										ENSSTOG00000032564 #13	ENSSTOG00000025629 #17	PATE1 (ENSSTOG00000014544) #18	PATE2 (ENSSTOG00000030211) #19	PATE3 (ENSSTOG00000027450) #20	ENSSTOG00000026387	HYLS1 (ENSSTOG00000003743) #22	PUS3 (ENSSTOG00000003721) #21	DDX25 (ENSSTOG00000003749) #23	VSIG10L2 (ENSSTOG00000033011) #26	CDON (ENSSTOG00000003762) #27	ENSSTOG00000004754	ENSSTOG00000028178	RPUSD4 (ENSSTOG00000025280) #29	FAM118B (ENSSTOG00000009886) #30	SRPRA (ENSSTOG00000009897) #31	FOXRED1 (ENSSTOG00000009915) #32	TIRAP (ENSSTOG00000009928) #33	DCPS (ENSSTOG00000009930) #34	ST3GAL4 (ENSSTOG00000020753) #35	KIRREL3 (ENSSTOG00000009951) #36	ETS1 (ENSSTOG00000009694) #37
Arctic ground squirrel	MODERN SPECIES	304	FEZ1 (ENSUPAG00010023824)	EI24 (ENSUPAG00010023825) #7	STT3A (ENSUPAG00010023827) #8	CHEK1 (ENSUPAG00010023830) #9	ACRV1 (ENSUPAG00010023832) #10	ENSUPAG00010023834 #11	ENSUPAG00010023835 #12	ENSUPAG00010023837 #13	ENSUPAG00010023838	ENSUPAG00010023839 #16	ENSUPAG00010023840 #17	PATE1 (ENSUPAG00010023842) #18	PATE2 (ENSUPAG00010023843) #19	PATE3 (ENSUPAG00010023845) #20	PUS3 (ENSUPAG00010023850) #21	HYLS1 (ENSUPAG00010023852) #22	DDX25 (ENSUPAG00010023854) #23	VSIG10L2 (ENSUPAG00010023855) #26	CDON (ENSUPAG00010023856) #27	ENSUPAG00010023857	ENSUPAG00010023858	RPUSD4 (ENSUPAG00010023860) #29	FAM118B (ENSUPAG00010023861) #30	SRPRA (ENSUPAG00010023863) #31	FOXRED1 (ENSUPAG00010023864) #32	TIRAP (ENSUPAG00010023865) #33	DCPS (ENSUPAG00010023866) #34	ST3GAL4 (ENSUPAG00010023867) #35	KIRREL3 (ENSUPAG00010023869) #36
Alpin marmot	MODERN SPECIES	58	FEZ1 (ENSMMMG00000001000)	EI24 (ENSMMMG00000001036) #7	STT3A (ENSMMMG00000001086) #8	CHEK1 (ENSMMMG00000001124) #9	ACRV1 (ENSMMMG00000001181) #10	ENSMMMG00000001194 #11	ENSMMMG00000001205 #12	ENSMMMG00000001219 #13	ENSMMMG00000001245	ENSMMMG00000001253 #16	ENSMMMG00000001275 #17	PATE1 (ENSMMMG00000001290) #18	PATE2 (ENSMMMG00000001297) #19	PATE3 (ENSMMMG00000001314) #20	PUS3 (ENSMMMG00000001366) #21	HYLS1 (ENSMMMG00000001378) #22	DDX25 (ENSMMMG00000001387) #23	VSIG10L2 (ENSMMMG00000001415) #26	CDON (ENSMMMG00000001450) #27	RPUSD4 (ENSMMMG00000001550) #29	FAM118B (ENSMMMG00000001569) #30	SRPRA (ENSMMMG00000001623) #31	FOXRED1 (ENSMMMG00000001639) #32	TIRAP (ENSMMMG00000001698) #33	ENSMMMG00000001701 #34	ST3GAL4 (ENSMMMG00000001723) #35	KIRREL3 (ENSMMMG00000001768) #36	ETS1 (ENSMMMG00000001971) #37	FLI1 (ENSMMMG00000002046)	KCNJ1 (ENSMMMG00000002066)	KCNJ5 (ENSMMMG00000002079)
Hystricomorpha	ANCESTRAL SPECIES	58	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00510000050146.A #13	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	63	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00510000050146.A #13	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00950000183160.A #21	ENSGT00390000008848 #22	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b	ENSGT01080000257365.b.a.b.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	77	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00510000050146.A #13	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Degu	DUPLICATION
Degu	MODERN SPECIES	177	TMEM218 (ENSODEG00000003550)	ENSODEG00000018922	PKNOX2 (ENSODEG00000003565)	FEZ1 (ENSODEG00000003678)	ENSODEG00000003729 #7	STT3A (ENSODEG00000003877) #8	ENSODEG00000003985 #9	ACRV1 (ENSODEG00000004018) #10	ENSODEG00000004060 #13	ENSODEG00000004035 #17	PATE1 (ENSODEG00000004044) #18	PATE2 (ENSODEG00000004054) #19	ENSODEG00000004259	PATE3 (ENSODEG00000004269) #20	PUS3 (ENSODEG00000004280) #21	ENSODEG00000019020 #22	DDX25 (ENSODEG00000004301) #23	VSIG10L2 (ENSODEG00000004355) #26	CDON (ENSODEG00000004426) #27	RPUSD4 (ENSODEG00000004577) #29	FAM118B (ENSODEG00000004700) #30	SRPRA (ENSODEG00000004730) #31	FOXRED1 (ENSODEG00000004744) #32	TIRAP (ENSODEG00000003079) #33	DCPS (ENSODEG00000003139) #34	ST3GAL4 (ENSODEG00000003168) #35	KIRREL3 (ENSODEG00000003375) #36	ETS1 (ENSODEG00000003638) #37	FLI1 (ENSODEG00000003815)	KCNJ1 (ENSODEG00000003852)	ENSODEG00000003913
Degu	MODERN SPECIES	92	ENSODEG00000006793	DLEU7 (ENSODEG00000006775)	ENSODEG00000006650	ENSODEG00000006325	ENSODEG00000019247	TRIM13 (ENSODEG00000005624)	ENSODEG00000006101	ENSODEG00000005796	ENSODEG00000006427	EBPL (ENSODEG00000006022)	RCBTB1 (ENSODEG00000009239)	SETDB2 (ENSODEG00000005653)	CAB39L (ENSODEG00000005405)	CDADC1 (ENSODEG00000005355)	MLNR (ENSODEG00000005947)	ENSODEG00000019344 #22	FNDC3A (ENSODEG00000005882)	ENSODEG00000005498	CYSLTR2 (ENSODEG00000005345)	ENSODEG00000019363	ENSODEG00000006804	RCBTB2 (ENSODEG00000007840)	LPAR6 (ENSODEG00000019536)	RB1 (ENSODEG00000007075)	ENSODEG00000005765	ENSODEG00000006829	NUDT15 (ENSODEG00000006598)	ENSODEG00000006404	ENSODEG00000005873	ENSODEG00000019388	ENSODEG00000005886
Long-tailed chinchilla	MODERN SPECIES	119	CCDC15 (ENSCLAG00000015010)	SLC37A2 (ENSCLAG00000017318)	TMEM218 (ENSCLAG00000015737)	PKNOX2 (ENSCLAG00000014511)	FEZ1 (ENSCLAG00000013933)	ENSCLAG00000017926	EI24 (ENSCLAG00000015350) #7	STT3A (ENSCLAG00000015037) #8	ENSCLAG00000014393 #9	ACRV1 (ENSCLAG00000015258) #10	ENSCLAG00000014886 #17	PATE1 (ENSCLAG00000017379) #18	PATE2 (ENSCLAG00000014213) #19	PATE3 (ENSCLAG00000016189) #20	ENSCLAG00000013836	HYLS1 (ENSCLAG00000015931) #22	PUS3 (ENSCLAG00000014947) #21	DDX25 (ENSCLAG00000015793) #23	VSIG10L2 (ENSCLAG00000015314) #26	CDON (ENSCLAG00000017248) #27	RPUSD4 (ENSCLAG00000016553) #29	FAM118B (ENSCLAG00000016883) #30	SRPRA (ENSCLAG00000016839) #31	ENSCLAG00000013314 #32	ENSCLAG00000014019	TIRAP (ENSCLAG00000014439) #33	DCPS (ENSCLAG00000015708) #34	ST3GAL4 (ENSCLAG00000016327) #35	KIRREL3 (ENSCLAG00000016134) #36	ENSCLAG00000015617	ETS1 (ENSCLAG00000016564) #37
Guinea pig	MODERN SPECIES	19	HEPACAM (ENSCPOG00000007623)	ENSCPOG00000037998	SLC37A2 (ENSCPOG00000004719)	TMEM218 (ENSCPOG00000040775)	PKNOX2 (ENSCPOG00000034080)	FEZ1 (ENSCPOG00000003163)	EI24 (ENSCPOG00000007272) #7	STT3A (ENSCPOG00000007283) #8	ENSCPOG00000026175 #9	ACRV1 (ENSCPOG00000007297) #10	ENSCPOG00000036264 #13	ENSCPOG00000031135 #17	PATE1 (ENSCPOG00000030186) #18	PATE2 (ENSCPOG00000012758) #19	PATE3 (ENSCPOG00000037646) #20	HYLS1 (ENSCPOG00000011455) #22	PUS3 (ENSCPOG00000032587) #21	DDX25 (ENSCPOG00000011456) #23	VSIG10L2 (ENSCPOG00000033995) #26	CDON (ENSCPOG00000005460) #27	RPUSD4 (ENSCPOG00000014971) #29	FAM118B (ENSCPOG00000014974) #30	SRPRA (ENSCPOG00000014976) #31	FOXRED1 (ENSCPOG00000014979) #32	TIRAP (ENSCPOG00000005834) #33	DCPS (ENSCPOG00000014358) #34	ST3GAL4 (ENSCPOG00000005968) #35	KIRREL3 (ENSCPOG00000014982) #36	ETS1 (ENSCPOG00000039277) #37	FLI1 (ENSCPOG00000030795)	KCNJ1 (ENSCPOG00000020661)
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000032791	CLMP (ENSHGLG00000001841)	ENSHGLG00000001884	BSX (ENSHGLG00000042535)	JHY (ENSHGLG00000001981)	CRTAM (ENSHGLG00000002032)	UBASH3B (ENSHGLG00000001126)	ENSHGLG00000034719	ENSHGLG00000045413	ENSHGLG00000037002	SORL1 (ENSHGLG00000001265)	SC5D (ENSHGLG00000044088)	TECTA (ENSHGLG00000001489)	TBCEL (ENSHGLG00000040222)	GRIK4 (ENSHGLG00000001757)	HYLS1 (ENSHGLG00000032168) #22	ENSHGLG00000000565 #21	DDX25 (ENSHGLG00000000748) #23	CDON (ENSHGLG00000001508) #27	ENSHGLG00000041999	RPUSD4 (ENSHGLG00000002285) #29	FAM118B (ENSHGLG00000000409) #30	ENSHGLG00000001597 #31	FOXRED1 (ENSHGLG00000044040) #32	TIRAP (ENSHGLG00000032073) #33	DCPS (ENSHGLG00000041279) #34	ST3GAL4 (ENSHGLG00000046104) #35	KIRREL3 (ENSHGLG00000006857) #36	ETS1 (ENSHGLG00000009624) #37	FLI1 (ENSHGLG00000001522)	KCNJ1 (ENSHGLG00000038536)
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629 #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629 #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Muroidea	ANCESTRAL SPECIES	52	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629.b #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a.b #11	ENSGT00940000163158.a.a.a.b #11	ENSGT00510000050363	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629.b #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a.a.a.b #11	ENSGT00510000050363	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629.b #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00510000050363	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629.b #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Prairie vole	MODERN SPECIES	13	Fez1 (ENSMOCG00000009218)	Ei24 (ENSMOCG00000006270) #7	Stt3a (ENSMOCG00000017001) #8	Chek1 (ENSMOCG00000003709) #9	Acrv1 (ENSMOCG00000019968) #10	ENSMOCG00000018756	Pate13 (ENSMOCG00000017438)	ENSMOCG00000013726 #13	Pate6 (ENSMOCG00000010226) #16	Pate7 (ENSMOCG00000005821) #16	Pate10 (ENSMOCG00000000729) #17	Pate1 (ENSMOCG00000021037) #18	ENSMOCG00000018699 #19	Pate3 (ENSMOCG00000014788) #20	Pate4 (ENSMOCG00000014916)	Hyls1 (ENSMOCG00000013294) #22	Pus3 (ENSMOCG00000004901) #21	Ddx25 (ENSMOCG00000002484) #23	Gm1113 (ENSMOCG00000019686) #26	Cdon (ENSMOCG00000013628) #27	ENSMOCG00000007218	Rpusd4 (ENSMOCG00000000661) #29	ENSMOCG00000015597 #30	Srpr (ENSMOCG00000008311) #31	Foxred1 (ENSMOCG00000021906) #32	Tirap (ENSMOCG00000012995) #33	Dcps (ENSMOCG00000006978) #34	St3gal4 (ENSMOCG00000020666) #35	Kirrel3 (ENSMOCG00000001172) #36	Ets1 (ENSMOCG00000013935) #37	Fli1 (ENSMOCG00000000967)
Northern American deer mouse	MODERN SPECIES	20	ENSPEMG00000028506	ENSPEMG00000026343	ENSPEMG00000027854	ENSPEMG00000029505 #13	ENSPEMG00000011339 #17	Pate13 (ENSPEMG00000014238)	ENSPEMG00000031218 #12	ENSPEMG00000012021 #13	Pate6 (ENSPEMG00000011844) #16	Pate7 (ENSPEMG00000011589) #16	Pate1 (ENSPEMG00000011105) #18	ENSPEMG00000010488 #19	Pate3 (ENSPEMG00000010421) #20	Pate4 (ENSPEMG00000010185)	Pus3 (ENSPEMG00000009602) #21	Hyls1 (ENSPEMG00000010075) #22	Ddx25 (ENSPEMG00000009334) #23	Gm1113 (ENSPEMG00000008734) #26	Cdon (ENSPEMG00000004669) #27	Rpusd4 (ENSPEMG00000000278) #29	Fam118b (ENSPEMG00000000058) #30	Srpr (ENSPEMG00000018279) #31	Foxred1 (ENSPEMG00000017785) #32	Tirap (ENSPEMG00000017279) #33	ENSPEMG00000016481 #34	St3gal4 (ENSPEMG00000015869) #35	Kirrel3 (ENSPEMG00000012376) #36	ENSPEMG00000027772	Ets1 (ENSPEMG00000009193) #37	Fli1 (ENSPEMG00000005402)	Kcnj1 (ENSPEMG00000001892)
Cricetinae	ANCESTRAL SPECIES	30	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a.a.a.b #11	ENSGT00510000050363	ENSGT00510000050146.A #13	ENSGT01100000263629.b #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001	ENSGT00950000183160.A #21	ENSGT00390000008848 #22	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b	ENSGT01080000257365.b.a.b.a.b
Chinese hamster chok1gshd	MODERN SPECIES	189	Chek1 (ENSCGRG00001018583) #9	Acrv1 (ENSCGRG00001014068) #10	ENSCGRG00001004726	ENSCGRG00001012002	Pate9 (ENSCGRG00001022197) #11	Pate13 (ENSCGRG00001020068)	ENSCGRG00001017623 #13	Pate6 (ENSCGRG00001019285) #16	ENSCGRG00001018035 #16	Pate10 (ENSCGRG00001007452) #17	Pate1 (ENSCGRG00001001631) #18	ENSCGRG00001024234 #19	Pate3 (ENSCGRG00001020653) #20	Pate4 (ENSCGRG00001018757)	Pus3 (ENSCGRG00001019842) #21	Hyls1 (ENSCGRG00001013942) #22	Ddx25 (ENSCGRG00001021499) #23	Gm1113 (ENSCGRG00001018198) #26	Cdon (ENSCGRG00001002126) #27	Rpusd4 (ENSCGRG00001024141) #29	Fam118b (ENSCGRG00001022035) #30	Srpr (ENSCGRG00001017670) #31	Foxred1 (ENSCGRG00001004784) #32	Tirap (ENSCGRG00001020991) #33	Dcps (ENSCGRG00001022394) #34	St3gal4 (ENSCGRG00001006222) #35	Kirrel3 (ENSCGRG00001015550) #36	Ets1 (ENSCGRG00001017138) #37	Fli1 (ENSCGRG00001007326)	Kcnj1 (ENSCGRG00001024296)	Kcnj5 (ENSCGRG00001023866)
Golden Hamster	MODERN SPECIES	457																ENSMAUG00000008515 #22
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a.a.a.a #11	ENSGT00940000163158.a.a.a.b #11	ENSGT00510000050363	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629.b #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Mus	ANCESTRAL SPECIES	4	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a.b.b #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629.b.a #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a.b.b #11	ENSGT00940000163158.a.a.b #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629.b.a #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001.a	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000162351 #10	ENSGT00940000163158.a.b.a #11	ENSGT00940000163158.a.b.b #11	ENSGT00940000163158.a.a.b #11	ENSGT00940000163158.a.a.a.b.b #11	ENSGT00940000163158.a.a.a.b.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A.h #13	ENSGT01100000263629.b.a #16	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001.a	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936.a #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a.b.a #11	ENSGT00940000163158.a.b.b #11	ENSGT00940000163158.a.a.b #11	ENSGT00940000163158.a.a.a.b.b #11	ENSGT00940000163158.a.a.a.b.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A.h #13	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00550000076001.a	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000163088 #26	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936.a #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b
Steppe mouse	MODERN SPECIES	3337														ENSMSIG00000008934	ENSMSIG00000008954	Hyls1 (ENSMSIG00000008977) #22	Pus3 (ENSMSIG00000008983) #21	Ddx25 (ENSMSIG00000009002) #23	ENSMSIG00000009021 #24	Gm1113 (ENSMSIG00000009064) #26	Cdon (ENSMSIG00000009081) #27	Rpusd4 (ENSMSIG00000009157) #29	Fam118b (ENSMSIG00000009187) #30	Srpr (ENSMSIG00000009265) #31	Foxred1 (ENSMSIG00000009311) #32	Tirap (ENSMSIG00000009381) #33	Dcps (ENSMSIG00000009452) #34	St3gal4 (ENSMSIG00000009536) #35	Kirrel3 (ENSMSIG00000009576) #36	Ets1 (ENSMSIG00000009911) #37	ENSMSIG00000010061
spretus	MODERN SPECIES	18	Acrv1 (MGP_SPRETEiJ_G0033097) #10	Pate14 (MGP_SPRETEiJ_G0033096) #11	Pate8 (MGP_SPRETEiJ_G0033095) #11	Pate9 (MGP_SPRETEiJ_G0033094) #11	Pate11 (MGP_SPRETEiJ_G0033093) #11	MGP_SPRETEiJ_G0033092 #13	MGP_SPRETEiJ_G0033091 #13	Pate6 (MGP_SPRETEiJ_G0033090) #16	MGP_SPRETEiJ_G0033088 #16	Pate7 (MGP_SPRETEiJ_G0033089) #16	Pate10 (MGP_SPRETEiJ_G0033087) #17	Pate1 (MGP_SPRETEiJ_G0033086) #18	Pate3 (MGP_SPRETEiJ_G0033085) #20	Pate4 (MGP_SPRETEiJ_G0033084)	Pate2 (MGP_SPRETEiJ_G0033083) #19	Hyls1 (MGP_SPRETEiJ_G0033082) #22	Pus3 (MGP_SPRETEiJ_G0033081) #21	Ddx25 (MGP_SPRETEiJ_G0033080) #23	Cdon (MGP_SPRETEiJ_G0033079) #27	Rpusd4 (MGP_SPRETEiJ_G0033078) #29	Fam118b (MGP_SPRETEiJ_G0033077) #30	Foxred1 (MGP_SPRETEiJ_G0033076) #32	Srpr (MGP_SPRETEiJ_G0033075) #31	Tirap (MGP_SPRETEiJ_G0033074) #33	Dcps (MGP_SPRETEiJ_G0033073) #34	St3gal4 (MGP_SPRETEiJ_G0033072) #35	Kirrel3 (MGP_SPRETEiJ_G0033071) #36	Ets1 (MGP_SPRETEiJ_G0033070) #37	Fli1 (MGP_SPRETEiJ_G0033069)	Kcnj1 (MGP_SPRETEiJ_G0033068)	Kcnj5 (MGP_SPRETEiJ_G0033067)
Mouse	MODERN SPECIES	18	Pate14 (ENSMUSG00000070313) #11	Pate8 (ENSMUSG00000091248) #11	Pate9 (ENSMUSG00000074448) #11	Pate11 (ENSMUSG00000090710) #11	Pate12 (ENSMUSG00000023093) #11	Gm5916 (ENSMUSG00000091411) #13	Pate13 (ENSMUSG00000078934)	Pate5 (ENSMUSG00000047980) #13	Pate6 (ENSMUSG00000032108) #16	Pate7 (ENSMUSG00000090738) #16	Pate10 (ENSMUSG00000091174) #17	Pate1 (ENSMUSG00000091215) #18	Pate3 (ENSMUSG00000094995) #20	Pate4 (ENSMUSG00000032099)	Pate2 (ENSMUSG00000074452) #19	Hyls1 (ENSMUSG00000050555) #22	Pus3 (ENSMUSG00000032103) #21	Ddx25 (ENSMUSG00000032101) #23	Gm1113 (ENSMUSG00000098590) #26	Cdon (ENSMUSG00000038119) #27	Rpusd4 (ENSMUSG00000032044) #29	Fam118b (ENSMUSG00000050471) #30	Foxred1 (ENSMUSG00000039048) #32	Srpr (ENSMUSG00000032042) #31	Tirap (ENSMUSG00000032041) #33	Dcps (ENSMUSG00000032040) #34	St3gal4 (ENSMUSG00000032038) #35	Kirrel3 (ENSMUSG00000032036) #36	Ets1 (ENSMUSG00000032035) #37	Fli1 (ENSMUSG00000016087)	Kcnj1 (ENSMUSG00000041248)
Ryukyu mouse	MODERN SPECIES	18	Stt3a (MGP_CAROLIEiJ_G0031973) #8	Chek1 (MGP_CAROLIEiJ_G0031972) #9	Acrv1 (MGP_CAROLIEiJ_G0031971) #10	Pate8 (MGP_CAROLIEiJ_G0031970) #11	MGP_CAROLIEiJ_G0031969 #11	MGP_CAROLIEiJ_G0031968 #13	MGP_CAROLIEiJ_G0031967 #13	Pate6 (MGP_CAROLIEiJ_G0031966) #16	MGP_CAROLIEiJ_G0031964 #16	Pate7 (MGP_CAROLIEiJ_G0031965) #16	Pate10 (MGP_CAROLIEiJ_G0031963) #17	Pate1 (MGP_CAROLIEiJ_G0031962) #18	Pate3 (MGP_CAROLIEiJ_G0031961) #20	MGP_CAROLIEiJ_G0031960	Pate2 (MGP_CAROLIEiJ_G0031959) #19	Hyls1 (MGP_CAROLIEiJ_G0031958) #22	Pus3 (MGP_CAROLIEiJ_G0031957) #21	Ddx25 (MGP_CAROLIEiJ_G0031956) #23	Cdon (MGP_CAROLIEiJ_G0031955) #27	Rpusd4 (MGP_CAROLIEiJ_G0031954) #29	Fam118b (MGP_CAROLIEiJ_G0031953) #30	Foxred1 (MGP_CAROLIEiJ_G0031952) #32	Srpr (MGP_CAROLIEiJ_G0031951) #31	Tirap (MGP_CAROLIEiJ_G0031950) #33	Dcps (MGP_CAROLIEiJ_G0031949) #34	St3gal4 (MGP_CAROLIEiJ_G0031948) #35	Kirrel3 (MGP_CAROLIEiJ_G0031947) #36	Ets1 (MGP_CAROLIEiJ_G0031946) #37	Fli1 (MGP_CAROLIEiJ_G0031945)	Kcnj1 (MGP_CAROLIEiJ_G0031944)	Kcnj5 (MGP_CAROLIEiJ_G0031943)
Shrew mouse	MODERN SPECIES	1	MGP_PahariEiJ_G0014838	Stt3a (MGP_PahariEiJ_G0014837) #8	Chek1 (MGP_PahariEiJ_G0014836) #9	Acrv1 (MGP_PahariEiJ_G0014835) #10	Pate14 (MGP_PahariEiJ_G0014834) #11	MGP_PahariEiJ_G0014833 #13	MGP_PahariEiJ_G0014832 #13	Pate6 (MGP_PahariEiJ_G0014831) #16	MGP_PahariEiJ_G0014829 #16	Pate7 (MGP_PahariEiJ_G0014830) #16	MGP_PahariEiJ_G0014828 #17	Pate1 (MGP_PahariEiJ_G0014827) #18	MGP_PahariEiJ_G0014826 #19	Pate3 (MGP_PahariEiJ_G0014825) #20	MGP_PahariEiJ_G0014824	Hyls1 (MGP_PahariEiJ_G0014823) #22	Pus3 (MGP_PahariEiJ_G0014822) #21	Ddx25 (MGP_PahariEiJ_G0014821) #23	Cdon (MGP_PahariEiJ_G0014820) #27	Rpusd4 (MGP_PahariEiJ_G0014819) #29	Fam118b (MGP_PahariEiJ_G0014818) #30	Foxred1 (MGP_PahariEiJ_G0014817) #32	Srpr (MGP_PahariEiJ_G0014816) #31	Tirap (MGP_PahariEiJ_G0014815) #33	Dcps (MGP_PahariEiJ_G0014814) #34	St3gal4 (MGP_PahariEiJ_G0014813) #35	Kirrel3 (MGP_PahariEiJ_G0014812) #36	Ets1 (MGP_PahariEiJ_G0014811) #37	Fli1 (MGP_PahariEiJ_G0014810)	Kcnj1 (MGP_PahariEiJ_G0014809)	Kcnj5 (MGP_PahariEiJ_G0014808)
Rat	MODERN SPECIES	18	LOC100362690 (ENSRNOG00000063953) #11	LOC100360095 (ENSRNOG00000043131) #11	LOC100360049 (ENSRNOG00000066595) #11	Pate14 (ENSRNOG00000066040) #11	LOC103693040 (ENSRNOG00000030188)	Pate-f (ENSRNOG00000049588) #12	Pate5 (ENSRNOG00000024026) #13	LOC100361828 (ENSRNOG00000039445) #16	Pate7 (ENSRNOG00000042925) #16	LOC100359924 (ENSRNOG00000049218) #17	Pate1 (ENSRNOG00000049600) #18	Pate2 (ENSRNOG00000033981) #19	Pate3 (ENSRNOG00000046243) #20	Pate4 (ENSRNOG00000070114)	Pate4b (ENSRNOG00000065914)	Hyls1 (ENSRNOG00000012980) #22	Pus3 (ENSRNOG00000012994) #21	Ddx25 (ENSRNOG00000012260) #23	Vsig10l2 (ENSRNOG00000055680) #26	Cdon (ENSRNOG00000011789) #27	Rpusd4 (ENSRNOG00000011567) #29	Fam118b (ENSRNOG00000011543) #30	Srpra (ENSRNOG00000010543) #31	Foxred1 (ENSRNOG00000060379) #32	Tirap (ENSRNOG00000021420) #33	ENSRNOG00000069075	Dcps (ENSRNOG00000009850) #35	Kirrel3 (ENSRNOG00000009772) #36	Ets1 (ENSRNOG00000008941) #37	Fli1 (ENSRNOG00000008904)	Kcnj1 (ENSRNOG00000059005)
Upper Galilee mountains blind mole rat	MODERN SPECIES	424	Slc37a2 (ENSNGAG00000019054)	Tmem218 (ENSNGAG00000005428)	Pknox2 (ENSNGAG00000017813)	Fez1 (ENSNGAG00000011753)	Ei24 (ENSNGAG00000008005) #7	Stt3a (ENSNGAG00000001094) #8	Chek1 (ENSNGAG00000011330) #9	Acrv1 (ENSNGAG00000009796) #10	ENSNGAG00000007403 #13	Pate7 (ENSNGAG00000012302) #16	Pate10 (ENSNGAG00000008596) #17	Pate1 (ENSNGAG00000006866) #18	ENSNGAG00000004667 #19	Pate3 (ENSNGAG00000020278) #20	Pate13 (ENSNGAG00000018626)	Hyls1 (ENSNGAG00000014953) #22	Pus3 (ENSNGAG00000013868) #21	Ddx25 (ENSNGAG00000006246) #23	Gm1113 (ENSNGAG00000000664) #26	ENSNGAG00000019500	Cdon (ENSNGAG00000011006) #27	Rpusd4 (ENSNGAG00000020847) #29	Fam118b (ENSNGAG00000016309) #30	Srpr (ENSNGAG00000015686) #31	Foxred1 (ENSNGAG00000001740) #32	Tirap (ENSNGAG00000014783) #33	Dcps (ENSNGAG00000011482) #34	St3gal4 (ENSNGAG00000022937) #35	Kirrel3 (ENSNGAG00000022154) #36
Lesser Egyptian jerboa	MODERN SPECIES	120												Pate1 (ENSJJAG00000018220) #18	ENSJJAG00000018389 #19	Pate3 (ENSJJAG00000010973) #20	Pus3 (ENSJJAG00000011306) #21	Hyls1 (ENSJJAG00000011897) #22	Ddx25 (ENSJJAG00000012739) #23	Gm1113 (ENSJJAG00000013983) #26	Cdon (ENSJJAG00000016206) #27	Rpusd4 (ENSJJAG00000018673) #29	Fam118b (ENSJJAG00000020046) #30	Srpr (ENSJJAG00000020272) #31	Foxred1 (ENSJJAG00000018828) #32	Tirap (ENSJJAG00000020261) #33	Dcps (ENSJJAG00000020913) #34	St3gal4 (ENSJJAG00000021810) #35	Kirrel3 (ENSJJAG00000000302) #36	Ets1 (ENSJJAG00000011471) #37	Fli1 (ENSJJAG00000014106)	ENSJJAG00000017124	Kcnj1 (ENSJJAG00000017169)
Kangaroo rat	MODERN SPECIES	329	Robo4 (ENSDORG00000011561)	Hepacam (ENSDORG00000013112)	Ccdc15 (ENSDORG00000004976)	Slc37a2 (ENSDORG00000013140)	Tmem218 (ENSDORG00000028050)	Pknox2 (ENSDORG00000008635)	Fez1 (ENSDORG00000008636)	ENSDORG00000010644 #7	Stt3a (ENSDORG00000013036) #8	Chek1 (ENSDORG00000013040) #9	Acrv1 (ENSDORG00000004316) #10	Pate10 (ENSDORG00000025642) #17	Pate1 (ENSDORG00000009056) #18	ENSDORG00000023962 #19	Pate3 (ENSDORG00000028774) #20	Hyls1 (ENSDORG00000026551) #22	Pus3 (ENSDORG00000001819) #21	Ddx25 (ENSDORG00000001822) #23	Gm1113 (ENSDORG00000026304) #26	Cdon (ENSDORG00000001825) #27	Rpusd4 (ENSDORG00000016717) #29	ENSDORG00000016718 #30	Srpr (ENSDORG00000016719) #31	ENSDORG00000016720 #32	Dcps (ENSDORG00000000696) #34	St3gal4 (ENSDORG00000003992) #35	Kirrel3 (ENSDORG00000003993) #36	ENSDORG00000027604	Ets1 (ENSDORG00000007930) #37	Fli1 (ENSDORG00000025430)	Kcnj1 (ENSDORG00000030107)
Lagomorpha	ANCESTRAL SPECIES	59	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633 #7	ENSGT00940000156655 #8	ENSGT00940000159682 #9	ENSGT00940000162351 #10	ENSGT00940000163158.a #11	ENSGT00510000050146.B #12	ENSGT00510000050146.A #13	ENSGT01100000263629 #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #19	ENSGT00690000102487 #20	ENSGT00510000050363	ENSGT00390000008848 #22	ENSGT00950000183160.A #21	ENSGT00940000159712 #23	ENSGT00940000157114 #27	ENSGT00940000158436 #29	ENSGT00390000010215.B #30	ENSGT00550000074936 #31	ENSGT00390000006114 #32	ENSGT00510000048428 #33	ENSGT00390000003924 #34	ENSGT00940000158893 #35	ENSGT00940000157126 #36	ENSGT00940000159519 #37	ENSGT00940000158261	ENSGT00990000203615.b.b	ENSGT01080000257365.b.a.b.a.b
Rabbit	MODERN SPECIES		STT3A (ENSOCUG00000014703) #8	ENSOCUG00000037176	ACRV1 (ENSOCUG00000017103) #10	ENSOCUG00000027736 #11	ENSOCUG00000035040 #12	ENSOCUG00000037379 #13	ENSOCUG00000031254	ENSOCUG00000038989 #16	ENSOCUG00000033341 #17	PATE1 (ENSOCUG00000035330) #18	PATE2 (ENSOCUG00000012321) #19	ENSOCUG00000030804	PATE3 (ENSOCUG00000037052) #20	ENSOCUG00000035156	ENSOCUG00000030700	HYLS1 (ENSOCUG00000004473) #22	PUS3 (ENSOCUG00000004468) #21	DDX25 (ENSOCUG00000004476) #23	CDON (ENSOCUG00000012610) #27	RPUSD4 (ENSOCUG00000017039) #29	FAM118B (ENSOCUG00000017049) #30	SRPRA (ENSOCUG00000017057) #31	FOXRED1 (ENSOCUG00000026364) #32	TIRAP (ENSOCUG00000012519) #33	ENSOCUG00000012520 #34	ST3GAL4 (ENSOCUG00000012528) #35	KIRREL3 (ENSOCUG00000012544) #36	c-ets-1 (ENSOCUG00000010492) #37	FLI1 (ENSOCUG00000013415)	KCNJ1 (ENSOCUG00000013422)	KCNJ5 (ENSOCUG00000015565)