Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629 #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Glires	ANCESTRAL SPECIES	1	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629 #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629 #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629 #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Muroidea	ANCESTRAL SPECIES	52	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629.b #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a.b #7	ENSGT00940000163158.a.a.a.b #10	ENSGT00510000050363 #13	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629.b #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a.a.a.a ##7	ENSGT00940000163158.a.a.a.b #10	ENSGT00510000050363 #13	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629.b #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Mus	ANCESTRAL SPECIES	4	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a.b.b #8	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629.b.a #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a.b.b #8	ENSGT00940000163158.a.a.b #9	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629.b.a #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001.a #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000162351	ENSGT00940000163158.a.b.a #7	ENSGT00940000163158.a.b.b #8	ENSGT00940000163158.a.a.b #9	ENSGT00940000163158.a.a.a.b.b #10	ENSGT00940000163158.a.a.a.b.a #11	ENSGT00510000050146.B ##12	ENSGT00510000050146.A.h #14	ENSGT01100000263629.b.a #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001.a #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936.a #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Mouse	MODERN SPECIES	18	Pate14 (ENSMUSG00000070313) #7	Pate8 (ENSMUSG00000091248) #8	Pate9 (ENSMUSG00000074448) #9	Pate11 (ENSMUSG00000090710) #10	Pate12 (ENSMUSG00000023093) #11	Gm5916 (ENSMUSG00000091411) #12	Pate13 (ENSMUSG00000078934) #13	Pate5 (ENSMUSG00000047980) #14	Pate6 (ENSMUSG00000032108) #15	Pate7 (ENSMUSG00000090738) #16	Pate10 (ENSMUSG00000091174) #17	Pate1 (ENSMUSG00000091215) #18	Pate3 (ENSMUSG00000094995) #19	Pate4 (ENSMUSG00000032099) #20	Pate2 (ENSMUSG00000074452) #21	Hyls1 (ENSMUSG00000050555) #22	Pus3 (ENSMUSG00000032103) #23	Ddx25 (ENSMUSG00000032101) #24	Gm1113 (ENSMUSG00000098590) #25	Cdon (ENSMUSG00000038119) #26	Rpusd4 (ENSMUSG00000032044) #27	Fam118b (ENSMUSG00000050471) #28	Foxred1 (ENSMUSG00000039048) #29	Srpr (ENSMUSG00000032042) #30	Tirap (ENSMUSG00000032041) #31	Dcps (ENSMUSG00000032040) #32	St3gal4 (ENSMUSG00000032038) #33	Kirrel3 (ENSMUSG00000032036) #34	Ets1 (ENSMUSG00000032035) #35	Fli1 (ENSMUSG00000016087) #36	Kcnj1 (ENSMUSG00000041248) #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a.b.a #7	ENSGT00940000163158.a.b.b #8	ENSGT00940000163158.a.a.b #9	ENSGT00940000163158.a.a.a.b.b #10	ENSGT00940000163158.a.a.a.b.a #11	ENSGT00510000050146.B ##12	ENSGT00510000050146.A.h #14	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001.a #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936.a #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Steppe mouse	MODERN SPECIES	3337														ENSMSIG00000008934 #13	ENSMSIG00000008954 ##20	Hyls1 (ENSMSIG00000008977) #22	Pus3 (ENSMSIG00000008983) #23	Ddx25 (ENSMSIG00000009002) #24	ENSMSIG00000009021	Gm1113 (ENSMSIG00000009064) #25	Cdon (ENSMSIG00000009081) #26	Rpusd4 (ENSMSIG00000009157) #27	Fam118b (ENSMSIG00000009187) #28	Srpr (ENSMSIG00000009265) #30	Foxred1 (ENSMSIG00000009311) #29	Tirap (ENSMSIG00000009381) #31	Dcps (ENSMSIG00000009452) #32	St3gal4 (ENSMSIG00000009536) #33	Kirrel3 (ENSMSIG00000009576) #34	Ets1 (ENSMSIG00000009911) #35	ENSMSIG00000010061 #36
spretus	MODERN SPECIES	18	Acrv1 (MGP_SPRETEiJ_G0033097)	Pate14 (MGP_SPRETEiJ_G0033096) #7	Pate8 (MGP_SPRETEiJ_G0033095) #8	Pate9 (MGP_SPRETEiJ_G0033094) #9	Pate11 (MGP_SPRETEiJ_G0033093) #10	MGP_SPRETEiJ_G0033092 #12	MGP_SPRETEiJ_G0033091 #12	Pate6 (MGP_SPRETEiJ_G0033090) #15	MGP_SPRETEiJ_G0033088 ##15	Pate7 (MGP_SPRETEiJ_G0033089) #16	Pate10 (MGP_SPRETEiJ_G0033087) #17	Pate1 (MGP_SPRETEiJ_G0033086) #18	Pate3 (MGP_SPRETEiJ_G0033085) #19	Pate4 (MGP_SPRETEiJ_G0033084) #20	Pate2 (MGP_SPRETEiJ_G0033083) #21	Hyls1 (MGP_SPRETEiJ_G0033082) #22	Pus3 (MGP_SPRETEiJ_G0033081) #23	Ddx25 (MGP_SPRETEiJ_G0033080) #24	Cdon (MGP_SPRETEiJ_G0033079) #26	Rpusd4 (MGP_SPRETEiJ_G0033078) #27	Fam118b (MGP_SPRETEiJ_G0033077) #28	Foxred1 (MGP_SPRETEiJ_G0033076) #29	Srpr (MGP_SPRETEiJ_G0033075) #30	Tirap (MGP_SPRETEiJ_G0033074) #31	Dcps (MGP_SPRETEiJ_G0033073) #32	St3gal4 (MGP_SPRETEiJ_G0033072) #33	Kirrel3 (MGP_SPRETEiJ_G0033071) #34	Ets1 (MGP_SPRETEiJ_G0033070) #35	Fli1 (MGP_SPRETEiJ_G0033069) #36	Kcnj1 (MGP_SPRETEiJ_G0033068) #37	Kcnj5 (MGP_SPRETEiJ_G0033067)
Ryukyu mouse	MODERN SPECIES	18	Stt3a (MGP_CAROLIEiJ_G0031973)	Chek1 (MGP_CAROLIEiJ_G0031972)	Acrv1 (MGP_CAROLIEiJ_G0031971)	Pate8 (MGP_CAROLIEiJ_G0031970) #8	MGP_CAROLIEiJ_G0031969 #9	MGP_CAROLIEiJ_G0031968 #12	MGP_CAROLIEiJ_G0031967 #12	Pate6 (MGP_CAROLIEiJ_G0031966) #15	MGP_CAROLIEiJ_G0031964 ##15	Pate7 (MGP_CAROLIEiJ_G0031965) #16	Pate10 (MGP_CAROLIEiJ_G0031963) #17	Pate1 (MGP_CAROLIEiJ_G0031962) #18	Pate3 (MGP_CAROLIEiJ_G0031961) #19	MGP_CAROLIEiJ_G0031960 #20	Pate2 (MGP_CAROLIEiJ_G0031959) #21	Hyls1 (MGP_CAROLIEiJ_G0031958) #22	Pus3 (MGP_CAROLIEiJ_G0031957) #23	Ddx25 (MGP_CAROLIEiJ_G0031956) #24	Cdon (MGP_CAROLIEiJ_G0031955) #26	Rpusd4 (MGP_CAROLIEiJ_G0031954) #27	Fam118b (MGP_CAROLIEiJ_G0031953) #28	Foxred1 (MGP_CAROLIEiJ_G0031952) #29	Srpr (MGP_CAROLIEiJ_G0031951) #30	Tirap (MGP_CAROLIEiJ_G0031950) #31	Dcps (MGP_CAROLIEiJ_G0031949) #32	St3gal4 (MGP_CAROLIEiJ_G0031948) #33	Kirrel3 (MGP_CAROLIEiJ_G0031947) #34	Ets1 (MGP_CAROLIEiJ_G0031946) #35	Fli1 (MGP_CAROLIEiJ_G0031945) #36	Kcnj1 (MGP_CAROLIEiJ_G0031944) #37	Kcnj5 (MGP_CAROLIEiJ_G0031943)
Shrew mouse	MODERN SPECIES	1	MGP_PahariEiJ_G0014838	Stt3a (MGP_PahariEiJ_G0014837)	Chek1 (MGP_PahariEiJ_G0014836)	Acrv1 (MGP_PahariEiJ_G0014835)	Pate14 (MGP_PahariEiJ_G0014834) #7	MGP_PahariEiJ_G0014833 #12	MGP_PahariEiJ_G0014832 #12	Pate6 (MGP_PahariEiJ_G0014831) #15	MGP_PahariEiJ_G0014829 ##15	Pate7 (MGP_PahariEiJ_G0014830) #16	MGP_PahariEiJ_G0014828 #17	Pate1 (MGP_PahariEiJ_G0014827) #18	MGP_PahariEiJ_G0014826 #21	Pate3 (MGP_PahariEiJ_G0014825) #19	MGP_PahariEiJ_G0014824 #20	Hyls1 (MGP_PahariEiJ_G0014823) #22	Pus3 (MGP_PahariEiJ_G0014822) #23	Ddx25 (MGP_PahariEiJ_G0014821) #24	Cdon (MGP_PahariEiJ_G0014820) #26	Rpusd4 (MGP_PahariEiJ_G0014819) #27	Fam118b (MGP_PahariEiJ_G0014818) #28	Foxred1 (MGP_PahariEiJ_G0014817) #29	Srpr (MGP_PahariEiJ_G0014816) #30	Tirap (MGP_PahariEiJ_G0014815) #31	Dcps (MGP_PahariEiJ_G0014814) #32	St3gal4 (MGP_PahariEiJ_G0014813) #33	Kirrel3 (MGP_PahariEiJ_G0014812) #34	Ets1 (MGP_PahariEiJ_G0014811) #35	Fli1 (MGP_PahariEiJ_G0014810) #36	Kcnj1 (MGP_PahariEiJ_G0014809) #37	Kcnj5 (MGP_PahariEiJ_G0014808)
Rat	MODERN SPECIES	18	LOC100362690 (ENSRNOG00000063953) ##7	LOC100360095 (ENSRNOG00000043131) #10	LOC100360049 (ENSRNOG00000066595) #10	Pate14 (ENSRNOG00000066040) #10	LOC103693040 (ENSRNOG00000030188) #13	Pate-f (ENSRNOG00000049588) ##12	Pate5 (ENSRNOG00000024026) #12	LOC100361828 (ENSRNOG00000039445) #15	Pate7 (ENSRNOG00000042925) #16	LOC100359924 (ENSRNOG00000049218) #17	Pate1 (ENSRNOG00000049600) #18	Pate2 (ENSRNOG00000033981) #21	Pate3 (ENSRNOG00000046243) #19	Pate4 (ENSRNOG00000070114) #20	Pate4b (ENSRNOG00000065914) #20	Hyls1 (ENSRNOG00000012980) #22	Pus3 (ENSRNOG00000012994) #23	Ddx25 (ENSRNOG00000012260) #24	Vsig10l2 (ENSRNOG00000055680) #25	Cdon (ENSRNOG00000011789) #26	Rpusd4 (ENSRNOG00000011567) #27	Fam118b (ENSRNOG00000011543) #28	Srpra (ENSRNOG00000010543) #30	Foxred1 (ENSRNOG00000060379) #29	Tirap (ENSRNOG00000021420) #31	ENSRNOG00000069075	Dcps (ENSRNOG00000009850) #33	Kirrel3 (ENSRNOG00000009772) #34	Ets1 (ENSRNOG00000008941) #35	Fli1 (ENSRNOG00000008904) #36	Kcnj1 (ENSRNOG00000059005) #37
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a.a.a.b #10	ENSGT00510000050363 #13	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629.b #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050363 #13	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629.b #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Prairie vole	MODERN SPECIES	13	Fez1 (ENSMOCG00000009218)	Ei24 (ENSMOCG00000006270)	Stt3a (ENSMOCG00000017001)	Chek1 (ENSMOCG00000003709)	Acrv1 (ENSMOCG00000019968)	ENSMOCG00000018756	Pate13 (ENSMOCG00000017438) #13	ENSMOCG00000013726 #12	Pate6 (ENSMOCG00000010226) #15	Pate7 (ENSMOCG00000005821) #16	Pate10 (ENSMOCG00000000729) #17	Pate1 (ENSMOCG00000021037) #18	ENSMOCG00000018699 #21	Pate3 (ENSMOCG00000014788) #19	Pate4 (ENSMOCG00000014916) #20	Hyls1 (ENSMOCG00000013294) #22	Pus3 (ENSMOCG00000004901) #23	Ddx25 (ENSMOCG00000002484) #24	Gm1113 (ENSMOCG00000019686) #25	Cdon (ENSMOCG00000013628) #26	ENSMOCG00000007218	Rpusd4 (ENSMOCG00000000661) #27	ENSMOCG00000015597 #28	Srpr (ENSMOCG00000008311) #30	Foxred1 (ENSMOCG00000021906) #29	Tirap (ENSMOCG00000012995) #31	Dcps (ENSMOCG00000006978) #32	St3gal4 (ENSMOCG00000020666) #33	Kirrel3 (ENSMOCG00000001172) #34	Ets1 (ENSMOCG00000013935) #35	Fli1 (ENSMOCG00000000967) #36
Northern American deer mouse	MODERN SPECIES	20	ENSPEMG00000028506	ENSPEMG00000026343	ENSPEMG00000027854	ENSPEMG00000029505 #12	ENSPEMG00000011339 #17	Pate13 (ENSPEMG00000014238) #13	ENSPEMG00000031218 ##12	ENSPEMG00000012021 #12	Pate6 (ENSPEMG00000011844) #15	Pate7 (ENSPEMG00000011589) #16	Pate1 (ENSPEMG00000011105) #18	ENSPEMG00000010488 #21	Pate3 (ENSPEMG00000010421) #19	Pate4 (ENSPEMG00000010185) #20	Pus3 (ENSPEMG00000009602) #23	Hyls1 (ENSPEMG00000010075) #22	Ddx25 (ENSPEMG00000009334) #24	Gm1113 (ENSPEMG00000008734) #25	Cdon (ENSPEMG00000004669) #26	Rpusd4 (ENSPEMG00000000278) #27	Fam118b (ENSPEMG00000000058) #28	Srpr (ENSPEMG00000018279) #30	Foxred1 (ENSPEMG00000017785) #29	Tirap (ENSPEMG00000017279) #31	ENSPEMG00000016481 #32	St3gal4 (ENSPEMG00000015869) #33	Kirrel3 (ENSPEMG00000012376) #34	ENSPEMG00000027772	Ets1 (ENSPEMG00000009193) #35	Fli1 (ENSPEMG00000005402) #36	Kcnj1 (ENSPEMG00000001892) #37
Cricetinae	ANCESTRAL SPECIES	30	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a.a.a.b #10	ENSGT00510000050363 #13	ENSGT00510000050146.A #12	ENSGT01100000263629.b #15	ENSGT01100000263629.a #16	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Chinese hamster chok1gshd	MODERN SPECIES	189	Chek1 (ENSCGRG00001018583)	Acrv1 (ENSCGRG00001014068)	ENSCGRG00001004726	ENSCGRG00001012002	Pate9 (ENSCGRG00001022197) #9	Pate13 (ENSCGRG00001020068) #13	ENSCGRG00001017623 #12	Pate6 (ENSCGRG00001019285) #15	ENSCGRG00001018035 #16	Pate10 (ENSCGRG00001007452) #17	Pate1 (ENSCGRG00001001631) #18	ENSCGRG00001024234 #21	Pate3 (ENSCGRG00001020653) #19	Pate4 (ENSCGRG00001018757) #20	Pus3 (ENSCGRG00001019842) #23	Hyls1 (ENSCGRG00001013942) #22	Ddx25 (ENSCGRG00001021499) #24	Gm1113 (ENSCGRG00001018198) #25	Cdon (ENSCGRG00001002126) #26	Rpusd4 (ENSCGRG00001024141) #27	Fam118b (ENSCGRG00001022035) #28	Srpr (ENSCGRG00001017670) #30	Foxred1 (ENSCGRG00001004784) #29	Tirap (ENSCGRG00001020991) #31	Dcps (ENSCGRG00001022394) #32	St3gal4 (ENSCGRG00001006222) #33	Kirrel3 (ENSCGRG00001015550) #34	Ets1 (ENSCGRG00001017138) #35	Fli1 (ENSCGRG00001007326) #36	Kcnj1 (ENSCGRG00001024296) #37	Kcnj5 (ENSCGRG00001023866)
Golden Hamster	MODERN SPECIES	457																ENSMAUG00000008515 #22
Upper Galilee mountains blind mole rat	MODERN SPECIES	424	Slc37a2 (ENSNGAG00000019054)	Tmem218 (ENSNGAG00000005428)	Pknox2 (ENSNGAG00000017813)	Fez1 (ENSNGAG00000011753)	Ei24 (ENSNGAG00000008005)	Stt3a (ENSNGAG00000001094)	Chek1 (ENSNGAG00000011330)	Acrv1 (ENSNGAG00000009796)	ENSNGAG00000007403 #12	Pate7 (ENSNGAG00000012302) #16	Pate10 (ENSNGAG00000008596) #17	Pate1 (ENSNGAG00000006866) #18	ENSNGAG00000004667 #21	Pate3 (ENSNGAG00000020278) #19	Pate13 (ENSNGAG00000018626) #13	Hyls1 (ENSNGAG00000014953) #22	Pus3 (ENSNGAG00000013868) #23	Ddx25 (ENSNGAG00000006246) #24	Gm1113 (ENSNGAG00000000664) #25	ENSNGAG00000019500	Cdon (ENSNGAG00000011006) #26	Rpusd4 (ENSNGAG00000020847) #27	Fam118b (ENSNGAG00000016309) #28	Srpr (ENSNGAG00000015686) #30	Foxred1 (ENSNGAG00000001740) #29	Tirap (ENSNGAG00000014783) #31	Dcps (ENSNGAG00000011482) #32	St3gal4 (ENSNGAG00000022937) #33	Kirrel3 (ENSNGAG00000022154) #34
Lesser Egyptian jerboa	MODERN SPECIES	120												Pate1 (ENSJJAG00000018220) #18	ENSJJAG00000018389 #21	Pate3 (ENSJJAG00000010973) #19	Pus3 (ENSJJAG00000011306) #23	Hyls1 (ENSJJAG00000011897) #22	Ddx25 (ENSJJAG00000012739) #24	Gm1113 (ENSJJAG00000013983) #25	Cdon (ENSJJAG00000016206) #26	Rpusd4 (ENSJJAG00000018673) #27	Fam118b (ENSJJAG00000020046) #28	Srpr (ENSJJAG00000020272) #30	Foxred1 (ENSJJAG00000018828) #29	Tirap (ENSJJAG00000020261) #31	Dcps (ENSJJAG00000020913) #32	St3gal4 (ENSJJAG00000021810) #33	Kirrel3 (ENSJJAG00000000302) #34	Ets1 (ENSJJAG00000011471) #35	Fli1 (ENSJJAG00000014106) #36	ENSJJAG00000017124	Kcnj1 (ENSJJAG00000017169) #37
Kangaroo rat	MODERN SPECIES	329	Robo4 (ENSDORG00000011561)	Hepacam (ENSDORG00000013112)	Ccdc15 (ENSDORG00000004976)	Slc37a2 (ENSDORG00000013140)	Tmem218 (ENSDORG00000028050)	Pknox2 (ENSDORG00000008635)	Fez1 (ENSDORG00000008636)	ENSDORG00000010644	Stt3a (ENSDORG00000013036)	Chek1 (ENSDORG00000013040)	Acrv1 (ENSDORG00000004316)	Pate10 (ENSDORG00000025642) #17	Pate1 (ENSDORG00000009056) #18	ENSDORG00000023962 #21	Pate3 (ENSDORG00000028774) #19	Hyls1 (ENSDORG00000026551) #22	Pus3 (ENSDORG00000001819) #23	Ddx25 (ENSDORG00000001822) #24	Gm1113 (ENSDORG00000026304) #25	Cdon (ENSDORG00000001825) #26	Rpusd4 (ENSDORG00000016717) #27	ENSDORG00000016718 #28	Srpr (ENSDORG00000016719) #30	ENSDORG00000016720 #29	Dcps (ENSDORG00000000696) #32	St3gal4 (ENSDORG00000003992) #33	Kirrel3 (ENSDORG00000003993) #34	ENSDORG00000027604	Ets1 (ENSDORG00000007930) #35	Fli1 (ENSDORG00000025430) #36	Kcnj1 (ENSDORG00000030107) #37
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629 #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Hystricomorpha	ANCESTRAL SPECIES	58	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Hystricomorpha_a	ANCESTRAL SPECIES	63	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	77	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Degu	DUPLICATION
Degu	MODERN SPECIES	177	TMEM218 (ENSODEG00000003550)	ENSODEG00000018922	PKNOX2 (ENSODEG00000003565)	FEZ1 (ENSODEG00000003678)	ENSODEG00000003729	STT3A (ENSODEG00000003877)	ENSODEG00000003985	ACRV1 (ENSODEG00000004018)	ENSODEG00000004060 #12	ENSODEG00000004035 #17	PATE1 (ENSODEG00000004044) #18	PATE2 (ENSODEG00000004054) #21	ENSODEG00000004259	PATE3 (ENSODEG00000004269) #19	PUS3 (ENSODEG00000004280) #23	ENSODEG00000019020 #22	DDX25 (ENSODEG00000004301) #24	VSIG10L2 (ENSODEG00000004355) #25	CDON (ENSODEG00000004426) #26	RPUSD4 (ENSODEG00000004577) #27	FAM118B (ENSODEG00000004700) #28	SRPRA (ENSODEG00000004730) #30	FOXRED1 (ENSODEG00000004744) #29	TIRAP (ENSODEG00000003079) #31	DCPS (ENSODEG00000003139) #32	ST3GAL4 (ENSODEG00000003168) #33	KIRREL3 (ENSODEG00000003375) #34	ETS1 (ENSODEG00000003638) #35	FLI1 (ENSODEG00000003815) #36	KCNJ1 (ENSODEG00000003852) #37	ENSODEG00000003913
Degu	MODERN SPECIES	92	ENSODEG00000006793	DLEU7 (ENSODEG00000006775)	ENSODEG00000006650	ENSODEG00000006325	ENSODEG00000019247	TRIM13 (ENSODEG00000005624)	ENSODEG00000006101	ENSODEG00000005796	ENSODEG00000006427	EBPL (ENSODEG00000006022)	RCBTB1 (ENSODEG00000009239)	SETDB2 (ENSODEG00000005653)	CAB39L (ENSODEG00000005405)	CDADC1 (ENSODEG00000005355)	MLNR (ENSODEG00000005947)	ENSODEG00000019344 #22	FNDC3A (ENSODEG00000005882)	ENSODEG00000005498	CYSLTR2 (ENSODEG00000005345)	ENSODEG00000019363	ENSODEG00000006804	RCBTB2 (ENSODEG00000007840)	LPAR6 (ENSODEG00000019536)	RB1 (ENSODEG00000007075)	ENSODEG00000005765	ENSODEG00000006829	NUDT15 (ENSODEG00000006598)	ENSODEG00000006404	ENSODEG00000005873	ENSODEG00000019388	ENSODEG00000005886
Long-tailed chinchilla	MODERN SPECIES	119	CCDC15 (ENSCLAG00000015010)	SLC37A2 (ENSCLAG00000017318)	TMEM218 (ENSCLAG00000015737)	PKNOX2 (ENSCLAG00000014511)	FEZ1 (ENSCLAG00000013933)	ENSCLAG00000017926	EI24 (ENSCLAG00000015350)	STT3A (ENSCLAG00000015037)	ENSCLAG00000014393	ACRV1 (ENSCLAG00000015258)	ENSCLAG00000014886 #17	PATE1 (ENSCLAG00000017379) #18	PATE2 (ENSCLAG00000014213) #21	PATE3 (ENSCLAG00000016189) #19	ENSCLAG00000013836 #13	HYLS1 (ENSCLAG00000015931) #22	PUS3 (ENSCLAG00000014947) #23	DDX25 (ENSCLAG00000015793) #24	VSIG10L2 (ENSCLAG00000015314) #25	CDON (ENSCLAG00000017248) #26	RPUSD4 (ENSCLAG00000016553) #27	FAM118B (ENSCLAG00000016883) #28	SRPRA (ENSCLAG00000016839) #30	ENSCLAG00000013314 #29	ENSCLAG00000014019	TIRAP (ENSCLAG00000014439) #31	DCPS (ENSCLAG00000015708) #32	ST3GAL4 (ENSCLAG00000016327) #33	KIRREL3 (ENSCLAG00000016134) #34	ENSCLAG00000015617	ETS1 (ENSCLAG00000016564) #35
Guinea pig	MODERN SPECIES	19	HEPACAM (ENSCPOG00000007623)	ENSCPOG00000037998	SLC37A2 (ENSCPOG00000004719)	TMEM218 (ENSCPOG00000040775)	PKNOX2 (ENSCPOG00000034080)	FEZ1 (ENSCPOG00000003163)	EI24 (ENSCPOG00000007272)	STT3A (ENSCPOG00000007283)	ENSCPOG00000026175	ACRV1 (ENSCPOG00000007297)	ENSCPOG00000036264 #12	ENSCPOG00000031135 #17	PATE1 (ENSCPOG00000030186) #18	PATE2 (ENSCPOG00000012758) #21	PATE3 (ENSCPOG00000037646) #19	HYLS1 (ENSCPOG00000011455) #22	PUS3 (ENSCPOG00000032587) #23	DDX25 (ENSCPOG00000011456) #24	VSIG10L2 (ENSCPOG00000033995) #25	CDON (ENSCPOG00000005460) #26	RPUSD4 (ENSCPOG00000014971) #27	FAM118B (ENSCPOG00000014974) #28	SRPRA (ENSCPOG00000014976) #30	FOXRED1 (ENSCPOG00000014979) #29	TIRAP (ENSCPOG00000005834) #31	DCPS (ENSCPOG00000014358) #32	ST3GAL4 (ENSCPOG00000005968) #33	KIRREL3 (ENSCPOG00000014982) #34	ETS1 (ENSCPOG00000039277) #35	FLI1 (ENSCPOG00000030795) #36	KCNJ1 (ENSCPOG00000020661) #37
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000032791	CLMP (ENSHGLG00000001841)	ENSHGLG00000001884	BSX (ENSHGLG00000042535)	JHY (ENSHGLG00000001981)	CRTAM (ENSHGLG00000002032)	UBASH3B (ENSHGLG00000001126)	ENSHGLG00000034719	ENSHGLG00000045413	ENSHGLG00000037002	SORL1 (ENSHGLG00000001265)	SC5D (ENSHGLG00000044088)	TECTA (ENSHGLG00000001489)	TBCEL (ENSHGLG00000040222)	GRIK4 (ENSHGLG00000001757)	HYLS1 (ENSHGLG00000032168) #22	ENSHGLG00000000565 #23	DDX25 (ENSHGLG00000000748) #24	CDON (ENSHGLG00000001508) #26	ENSHGLG00000041999	RPUSD4 (ENSHGLG00000002285) #27	FAM118B (ENSHGLG00000000409) #28	ENSHGLG00000001597 #30	FOXRED1 (ENSHGLG00000044040) #29	TIRAP (ENSHGLG00000032073) #31	DCPS (ENSHGLG00000041279) #32	ST3GAL4 (ENSHGLG00000046104) #33	KIRREL3 (ENSHGLG00000006857) #34	ETS1 (ENSHGLG00000009624) #35	FLI1 (ENSHGLG00000001522) #36	KCNJ1 (ENSHGLG00000038536) #37
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629.c #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Marmotini	ANCESTRAL SPECIES	20	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Marmotini_b	ANCESTRAL SPECIES	75	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT01100000266206	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Squirrel	MODERN SPECIES	172										ENSSTOG00000032564 #12	ENSSTOG00000025629 #17	PATE1 (ENSSTOG00000014544) #18	PATE2 (ENSSTOG00000030211) #21	PATE3 (ENSSTOG00000027450) #19	ENSSTOG00000026387 #13	HYLS1 (ENSSTOG00000003743) #22	PUS3 (ENSSTOG00000003721) #23	DDX25 (ENSSTOG00000003749) #24	VSIG10L2 (ENSSTOG00000033011) #25	CDON (ENSSTOG00000003762) #26	ENSSTOG00000004754	ENSSTOG00000028178	RPUSD4 (ENSSTOG00000025280) #27	FAM118B (ENSSTOG00000009886) #28	SRPRA (ENSSTOG00000009897) #30	FOXRED1 (ENSSTOG00000009915) #29	TIRAP (ENSSTOG00000009928) #31	DCPS (ENSSTOG00000009930) #32	ST3GAL4 (ENSSTOG00000020753) #33	KIRREL3 (ENSSTOG00000009951) #34	ETS1 (ENSSTOG00000009694) #35
Arctic ground squirrel	MODERN SPECIES	304	FEZ1 (ENSUPAG00010023824)	EI24 (ENSUPAG00010023825)	STT3A (ENSUPAG00010023827)	CHEK1 (ENSUPAG00010023830)	ACRV1 (ENSUPAG00010023832)	ENSUPAG00010023834 #7	ENSUPAG00010023835 ##12	ENSUPAG00010023837 #12	ENSUPAG00010023838	ENSUPAG00010023839 #15	ENSUPAG00010023840 #17	PATE1 (ENSUPAG00010023842) #18	PATE2 (ENSUPAG00010023843) #21	PATE3 (ENSUPAG00010023845) #19	PUS3 (ENSUPAG00010023850) #23	HYLS1 (ENSUPAG00010023852) #22	DDX25 (ENSUPAG00010023854) #24	VSIG10L2 (ENSUPAG00010023855) #25	CDON (ENSUPAG00010023856) #26	ENSUPAG00010023857	ENSUPAG00010023858	RPUSD4 (ENSUPAG00010023860) #27	FAM118B (ENSUPAG00010023861) #28	SRPRA (ENSUPAG00010023863) #30	FOXRED1 (ENSUPAG00010023864) #29	TIRAP (ENSUPAG00010023865) #31	DCPS (ENSUPAG00010023866) #32	ST3GAL4 (ENSUPAG00010023867) #33	KIRREL3 (ENSUPAG00010023869) #34
Alpin marmot	MODERN SPECIES	58	FEZ1 (ENSMMMG00000001000)	EI24 (ENSMMMG00000001036)	STT3A (ENSMMMG00000001086)	CHEK1 (ENSMMMG00000001124)	ACRV1 (ENSMMMG00000001181)	ENSMMMG00000001194 #7	ENSMMMG00000001205 ##12	ENSMMMG00000001219 #12	ENSMMMG00000001245	ENSMMMG00000001253 #15	ENSMMMG00000001275 #17	PATE1 (ENSMMMG00000001290) #18	PATE2 (ENSMMMG00000001297) #21	PATE3 (ENSMMMG00000001314) #19	PUS3 (ENSMMMG00000001366) #23	HYLS1 (ENSMMMG00000001378) #22	DDX25 (ENSMMMG00000001387) #24	VSIG10L2 (ENSMMMG00000001415) #25	CDON (ENSMMMG00000001450) #26	RPUSD4 (ENSMMMG00000001550) #27	FAM118B (ENSMMMG00000001569) #28	SRPRA (ENSMMMG00000001623) #30	FOXRED1 (ENSMMMG00000001639) #29	TIRAP (ENSMMMG00000001698) #31	ENSMMMG00000001701 #32	ST3GAL4 (ENSMMMG00000001723) #33	KIRREL3 (ENSMMMG00000001768) #34	ETS1 (ENSMMMG00000001971) #35	FLI1 (ENSMMMG00000002046) #36	KCNJ1 (ENSMMMG00000002066) #37	KCNJ5 (ENSMMMG00000002079)
Eurasian red squirrel	MODERN SPECIES	2	EI24 (ENSSVLG00005017492)	ENSSVLG00005017870	ENSSVLG00005018204	ACRV1 (ENSSVLG00005018355)	ENSSVLG00005018441 #7	ENSSVLG00005018489 ##12	ENSSVLG00005018542 #12	ENSSVLG00005018577 #15	ENSSVLG00005018628	ENSSVLG00005018662 #15	ENSSVLG00005018759 #17	PATE1 (ENSSVLG00005018811) #18	PATE2 (ENSSVLG00005018933) #21	PATE3 (ENSSVLG00005019015) #19	PUS3 (ENSSVLG00005019054) #23	HYLS1 (ENSSVLG00005019099) #22	DDX25 (ENSSVLG00005019148) #24	ENSSVLG00005019300	ENSSVLG00005019361	VSIG10L2 (ENSSVLG00005019476) #25	CDON (ENSSVLG00005019551) #26	ENSSVLG00005019624	RPUSD4 (ENSSVLG00005019658) #27	FAM118B (ENSSVLG00005019758) #28	SRPRA (ENSSVLG00005019885) #30	FOXRED1 (ENSSVLG00005020162) #29	TIRAP (ENSSVLG00005020272) #31	DCPS (ENSSVLG00005020312) #32	ST3GAL4 (ENSSVLG00005020349) #33	KIRREL3 (ENSSVLG00005020503) #34	ETS1 (ENSSVLG00005020912) #35
Lagomorpha	ANCESTRAL SPECIES	59	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.a #7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629 #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Rabbit	MODERN SPECIES		STT3A (ENSOCUG00000014703)	ENSOCUG00000037176	ACRV1 (ENSOCUG00000017103)	ENSOCUG00000027736 #7	ENSOCUG00000035040 ##12	ENSOCUG00000037379 #12	ENSOCUG00000031254	ENSOCUG00000038989 #15	ENSOCUG00000033341 #17	PATE1 (ENSOCUG00000035330) #18	PATE2 (ENSOCUG00000012321) #21	ENSOCUG00000030804	PATE3 (ENSOCUG00000037052) #19	ENSOCUG00000035156 #13	ENSOCUG00000030700 #13	HYLS1 (ENSOCUG00000004473) #22	PUS3 (ENSOCUG00000004468) #23	DDX25 (ENSOCUG00000004476) #24	CDON (ENSOCUG00000012610) #26	RPUSD4 (ENSOCUG00000017039) #27	FAM118B (ENSOCUG00000017049) #28	SRPRA (ENSOCUG00000017057) #30	FOXRED1 (ENSOCUG00000026364) #29	TIRAP (ENSOCUG00000012519) #31	ENSOCUG00000012520 #32	ST3GAL4 (ENSOCUG00000012528) #33	KIRREL3 (ENSOCUG00000012544) #34	c-ets-1 (ENSOCUG00000010492) #35	FLI1 (ENSOCUG00000013415) #36	KCNJ1 (ENSOCUG00000013422) #37	KCNJ5 (ENSOCUG00000015565)
Primates	ANCESTRAL SPECIES		ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Strepsirrhini	ANCESTRAL SPECIES	48										ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b	ENSGT00940000154313.d
Bushbaby	MODERN SPECIES	212												PATE1 (ENSOGAG00000013405) #18	PATE2 (ENSOGAG00000013407) #21	ENSOGAG00000029669 #13	PUS3 (ENSOGAG00000008913) #23	HYLS1 (ENSOGAG00000008916) #22	DDX25 (ENSOGAG00000013409) #24	CDON (ENSOGAG00000008918) #26	ENSOGAG00000028968	RPUSD4 (ENSOGAG00000008922) #27	FAM118B (ENSOGAG00000008923) #28	SRPRA (ENSOGAG00000008926) #30	FOXRED1 (ENSOGAG00000008933) #29	TIRAP (ENSOGAG00000008935) #31	DCPS (ENSOGAG00000008937) #32	ST3GAL4 (ENSOGAG00000010459) #33	KIRREL3 (ENSOGAG00000010463) #34	ETS1 (ENSOGAG00000015467) #35	FLI1 (ENSOGAG00000013083) #36	KCNJ1 (ENSOGAG00000031352) #37	KCNJ5 (ENSOGAG00000013078)
Lemuriformes	ANCESTRAL SPECIES	86										ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b	ENSGT00940000154313.d
Lemuriformes_a	ANCESTRAL SPECIES	198										ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34
Greater bamboo lemur	MODERN SPECIES	40															PUS3 (ENSPSMG00000008021) #23	HYLS1 (ENSPSMG00000008015) #22	DDX25 (ENSPSMG00000007997) #24	CDON (ENSPSMG00000007926) #26	ENSPSMG00000007854	RPUSD4 (ENSPSMG00000007844) #27	FAM118B (ENSPSMG00000007833) #28	SRPRA (ENSPSMG00000007745) #30	FOXRED1 (ENSPSMG00000007650) #29	TIRAP (ENSPSMG00000007625) #31	DCPS (ENSPSMG00000007617) #32	ST3GAL4 (ENSPSMG00000007518) #33	KIRREL3 (ENSPSMG00000007332) #34
Haplorrhini	ANCESTRAL SPECIES		ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Simiiformes	ANCESTRAL SPECIES		ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Vervet Monkey	MODERN SPECIES		HEPACAM (ENSCSAG00000002336)	CCDC15 (ENSCSAG00000002331)	SLC37A2 (ENSCSAG00000002323)	TMEM218 (ENSCSAG00000002313)	PKNOX2 (ENSCSAG00000002312)	FEZ1 (ENSCSAG00000002308)	EI24 (ENSCSAG00000002304)	STT3A (ENSCSAG00000002298)	CHEK1 (ENSCSAG00000002294)	PATE3 (ENSCSAG00000002291) #19	ACRV1 (ENSCSAG00000002289)	PATE1 (ENSCSAG00000002287) #18	PATE2 (ENSCSAG00000002285) #21	PATE4 (ENSCSAG00000002282) #20	PUS3 (ENSCSAG00000002281) #23	HYLS1 (ENSCSAG00000000583) #22	DDX25 (ENSCSAG00000002279) #24	CDON (ENSCSAG00000002277) #26	RPUSD4 (ENSCSAG00000002274) #27	FAM118B (ENSCSAG00000002272) #28	SRPRA (ENSCSAG00000002271) #30	FOXRED1 (ENSCSAG00000002267) #29	TIRAP (ENSCSAG00000002260) #31	ENSCSAG00000002258	DCPS (ENSCSAG00000002256) #32	ST3GAL4 (ENSCSAG00000002253) #33	KIRREL3 (ENSCSAG00000002248) #34	ENSCSAG00000002244	ETS1 (ENSCSAG00000002243) #35	FLI1 (ENSCSAG00000002240) #36	KCNJ1 (ENSCSAG00000002237) #37
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00910000147854	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00910000147854	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00910000147854	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000059820	CCDC15 (ENSMFAG00000038419)	SLC37A2 (ENSMFAG00000002233)	TMEM218 (ENSMFAG00000035993)	PKNOX2 (ENSMFAG00000046199)	FEZ1 (ENSMFAG00000002076)	EI24 (ENSMFAG00000042989)	STT3A (ENSMFAG00000034547)	CHEK1 (ENSMFAG00000000771)	ACRV1 (ENSMFAG00000036664)	ENSMFAG00000052402 #17	PATE1 (ENSMFAG00000000989) #18	PATE2 (ENSMFAG00000003094) #21	PATE3 (ENSMFAG00000052555) #19	PATE4 (ENSMFAG00000045027) #20	HYLS1 (ENSMFAG00000010478) #22	ENSMFAG00000030379	PUS3 (ENSMFAG00000041002) #23	DDX25 (ENSMFAG00000040048) #24	VSIG10L2 (ENSMFAG00000038033) #25	CDON (ENSMFAG00000033244) #26	RPUSD4 (ENSMFAG00000039513) #27	FAM118B (ENSMFAG00000003040) #28	SRPRA (ENSMFAG00000032606) #30	FOXRED1 (ENSMFAG00000031974) #29	ENSMFAG00000049868	ENSMFAG00000042234 #31	DCPS (ENSMFAG00000057084) #32	ST3GAL4 (ENSMFAG00000039592) #33	KIRREL3 (ENSMFAG00000043359) #34	ENSMFAG00000064567
Rhesus	MODERN SPECIES	5	ENSMMUG00000061647	PKNOX2 (ENSMMUG00000008053)	FEZ1 (ENSMMUG00000008048)	ENSMMUG00000057529	EI24 (ENSMMUG00000010009)	STT3A (ENSMMUG00000054773)	CHEK1 (ENSMMUG00000010010)	ACRV1 (ENSMMUG00000014812)	ENSMMUG00000050731	ENSMMUG00000060925 #17	PATE1 (ENSMMUG00000020210) #18	PATE2 (ENSMMUG00000038587) #21	PATE3 (ENSMMUG00000060291) #19	ENSMMUG00000014120 #13	PATE4 (ENSMMUG00000039042) #20	HYLS1 (ENSMMUG00000048333) #22	PUS3 (ENSMMUG00000041875) #23	DDX25 (ENSMMUG00000007624) #24	VSIG10L2 (ENSMMUG00000065066) #25	CDON (ENSMMUG00000007628) #26	RPUSD4 (ENSMMUG00000007933) #27	FAM118B (ENSMMUG00000007935) #28	SRPRA (ENSMMUG00000007938) #30	FOXRED1 (ENSMMUG00000007944) #29	TIRAP (ENSMMUG00000051458) #31	DCPS (ENSMMUG00000054996) #32	ST3GAL4 (ENSMMUG00000006929) #33	KIRREL3 (ENSMMUG00000006931) #34	ENSMMUG00000049540	ETS1 (ENSMMUG00000020706) #35	FLI1 (ENSMMUG00000003141) #36
Pig-tailed macaque	MODERN SPECIES	537	HEPACAM (ENSMNEG00000038102)	CCDC15 (ENSMNEG00000040047)	SLC37A2 (ENSMNEG00000009671)	TMEM218 (ENSMNEG00000028980)	PKNOX2 (ENSMNEG00000035835)	FEZ1 (ENSMNEG00000027684)	EI24 (ENSMNEG00000039166)	STT3A (ENSMNEG00000043543)	ACRV1 (ENSMNEG00000032872)	CHEK1 (ENSMNEG00000044946)	PATE1 (ENSMNEG00000034376) #18	PATE3 (ENSMNEG00000045440) #19	PATE2 (ENSMNEG00000028871) #21	PATE4 (ENSMNEG00000042116) #20	ENSMNEG00000027092	HYLS1 (ENSMNEG00000028176) #22	PUS3 (ENSMNEG00000045347) #23	DDX25 (ENSMNEG00000034512) #24	VSIG10L2 (ENSMNEG00000044175) #25	CDON (ENSMNEG00000028538) #26	ENSMNEG00000034403	RPUSD4 (ENSMNEG00000027414) #27	FAM118B (ENSMNEG00000038757) #28	SRPRA (ENSMNEG00000030709) #30	FOXRED1 (ENSMNEG00000030710) #29	TIRAP (ENSMNEG00000034781) #31	DCPS (ENSMNEG00000029735) #32	ST3GAL4 (ENSMNEG00000035708) #33	KIRREL3 (ENSMNEG00000030417) #34	ENSMNEG00000035931	ETS1 (ENSMNEG00000016336) #35
Cercopithecinae_b	ANCESTRAL SPECIES	21	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00910000147854	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924.t #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35	ENSGT00940000158261 #36
Olive baboon	MODERN SPECIES	3	ROBO4 (ENSPANG00000009754)	HEPACAM (ENSPANG00000026254)	CCDC15 (ENSPANG00000010524)	SLC37A2 (ENSPANG00000014341)	TMEM218 (ENSPANG00000017161)	PKNOX2 (ENSPANG00000014340)	FEZ1 (ENSPANG00000030767)	EI24 (ENSPANG00000023740)	STT3A (ENSPANG00000004684)	ACRV1 (ENSPANG00000010859)	CHEK1 (ENSPANG00000009132)	PATE1 (ENSPANG00000029882) #18	PATE2 (ENSPANG00000010523) #21	PATE3 (ENSPANG00000019797) #19	PATE4 (ENSPANG00000004947) #20	HYLS1 (ENSPANG00000014695) #22	PUS3 (ENSPANG00000013782) #23	DDX25 (ENSPANG00000005372) #24	VSIG10L2 (ENSPANG00000029533) #25	CDON (ENSPANG00000016858) #26	RPUSD4 (ENSPANG00000015040) #27	FAM118B (ENSPANG00000011813) #28	SRPRA (ENSPANG00000010858) #30	FOXRED1 (ENSPANG00000005037) #29	TIRAP (ENSPANG00000039042) #31	DCPS (ENSPANG00000010632) #32	ENSPANG00000042602 #32	ENSPANG00000023927 #33	KIRREL3 (ENSPANG00000010857) #34	ENSPANG00000049923	ENSPANG00000047448
Cercopithecinae_d	ANCESTRAL SPECIES	30	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00910000147854	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924.t #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35	ENSGT00940000158261 #36
Sooty mangabey	MODERN SPECIES	603	CCDC15 (ENSCATG00000028817)	SLC37A2 (ENSCATG00000036580)	TMEM218 (ENSCATG00000007615)	PKNOX2 (ENSCATG00000037393)	FEZ1 (ENSCATG00000042876)	EI24 (ENSCATG00000040611)	STT3A (ENSCATG00000018377)	CHEK1 (ENSCATG00000020189)	ACRV1 (ENSCATG00000036586)	PATE1 (ENSCATG00000044754) #18	PATE2 (ENSCATG00000036528) #21	PATE3 (ENSCATG00000044828) #19	ENSCATG00000040866 #13	PATE4 (ENSCATG00000041115) #20	PUS3 (ENSCATG00000043123) #23	HYLS1 (ENSCATG00000019190) #22	DDX25 (ENSCATG00000042562) #24	VSIG10L2 (ENSCATG00000041159) #25	CDON (ENSCATG00000043400) #26	RPUSD4 (ENSCATG00000041570) #27	FAM118B (ENSCATG00000011672) #28	SRPRA (ENSCATG00000039354) #30	FOXRED1 (ENSCATG00000036900) #29	TIRAP (ENSCATG00000034587) #31	DCPS (ENSCATG00000006118) #32	ST3GAL4 (ENSCATG00000041462) #33	KIRREL3 (ENSCATG00000033720) #34	ENSCATG00000035453	ETS1 (ENSCATG00000035558) #35	FLI1 (ENSCATG00000043673) #36	KCNJ1 (ENSCATG00000032588) #37
Drill	MODERN SPECIES	1380				PKNOX2 (ENSMLEG00000043112)	FEZ1 (ENSMLEG00000040338)	EI24 (ENSMLEG00000041112)	STT3A (ENSMLEG00000027470)	CHEK1 (ENSMLEG00000032859)	ACRV1 (ENSMLEG00000033433)	PATE1 (ENSMLEG00000028089) #18	PATE2 (ENSMLEG00000034068) #21	PATE3 (ENSMLEG00000033109) #19	ENSMLEG00000032059 #13	PATE4 (ENSMLEG00000036145) #20	ENSMLEG00000003295	HYLS1 (ENSMLEG00000018345) #22	PUS3 (ENSMLEG00000029053) #23	DDX25 (ENSMLEG00000041703) #24	VSIG10L2 (ENSMLEG00000031705) #25	CDON (ENSMLEG00000038907) #26	ENSMLEG00000034453	RPUSD4 (ENSMLEG00000042461) #27	FAM118B (ENSMLEG00000003442) #28	SRPRA (ENSMLEG00000043404) #30	FOXRED1 (ENSMLEG00000038609) #29	TIRAP (ENSMLEG00000043606) #31	DCPS (ENSMLEG00000028091) #32	ST3GAL4 (ENSMLEG00000035571) #33	KIRREL3 (ENSMLEG00000040698) #34
Rhinopithecus	ANCESTRAL SPECIES	121					ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655.a	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Golden snub-nosed monkey	MODERN SPECIES	2808					PKNOX2 (ENSRROG00000013278)	FEZ1 (ENSRROG00000034766)	ENSRROG00000030105	ENSRROG00000037679	ACRV1 (ENSRROG00000033372)	PATE1 (ENSRROG00000027207) #18	PATE2 (ENSRROG00000038623) #21	PATE3 (ENSRROG00000012771) #19	ENSRROG00000034353 #13	PATE4 (ENSRROG00000038206) #20	PUS3 (ENSRROG00000035245) #23	HYLS1 (ENSRROG00000028439) #22	DDX25 (ENSRROG00000033468) #24	VSIG10L2 (ENSRROG00000034330) #25	CDON (ENSRROG00000032760) #26	ENSRROG00000035797	RPUSD4 (ENSRROG00000039753) #27	FAM118B (ENSRROG00000045192) #28	SRPRA (ENSRROG00000029494) #30	FOXRED1 (ENSRROG00000038351) #29	TIRAP (ENSRROG00000045268) #31	DCPS (ENSRROG00000033864) #32	ST3GAL4 (ENSRROG00000045429) #33	KIRREL3 (ENSRROG00000040694) #34	ETS1 (ENSRROG00000016097) #35	FLI1 (ENSRROG00000038261) #36	KCNJ1 (ENSRROG00000043080) #37
Hominoidea	ANCESTRAL SPECIES	1	ENSGT01100000263551.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Hominidae	ANCESTRAL SPECIES	1	ENSGT00510000055197	ENSGT01100000263551.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00510000055197	ENSGT01100000263551.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793.l	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT01100000263551.a	ENSGT00510000055197	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793.l	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35
Human	MODERN SPECIES	2	HEPACAM (ENSG00000165478)	HEPN1 (ENSG00000221932)	CCDC15 (ENSG00000149548)	SLC37A2 (ENSG00000134955)	TMEM218 (ENSG00000150433)	PKNOX2 (ENSG00000165495)	FEZ1 (ENSG00000149557)	EI24 (ENSG00000149547)	STT3A (ENSG00000134910)	CHEK1 (ENSG00000149554)	ACRV1 (ENSG00000134940)	PATE1 (ENSG00000171053) #18	PATE2 (ENSG00000196844) #21	PATE3 (ENSG00000236027) #19	PATE4 (ENSG00000237353) #20	HYLS1 (ENSG00000198331) #22	PUS3 (ENSG00000110060) #23	DDX25 (ENSG00000109832) #24	VSIG10L2 (ENSG00000283703) #25	CDON (ENSG00000064309) #26	RPUSD4 (ENSG00000165526) #27	FAM118B (ENSG00000197798) #28	SRPRA (ENSG00000182934) #30	FOXRED1 (ENSG00000110074) #29	TIRAP (ENSG00000150455) #31	DCPS (ENSG00000110063) #32	ST3GAL4 (ENSG00000110080) #33	KIRREL3 (ENSG00000149571) #34	ETS1 (ENSG00000134954) #35	FLI1 (ENSG00000151702) #36	KCNJ1 (ENSG00000151704) #37
Pan	ANCESTRAL SPECIES	1	ENSGT01100000263551.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793.l	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00550000076001 #20	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000161696.d	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00910000147313	ENSGT00940000159519 #35	ENSGT00940000158261 #36
Chimpanzee	MODERN SPECIES	2	HEPN1 (ENSPTRG00000042105)	CCDC15 (ENSPTRG00000004436)	SLC37A2 (ENSPTRG00000004437)	TMEM218 (ENSPTRG00000004438)	PKNOX2 (ENSPTRG00000004440)	FEZ1 (ENSPTRG00000004442)	EI24 (ENSPTRG00000004444)	STT3A (ENSPTRG00000004445)	CHEK1 (ENSPTRG00000004446)	ACRV1 (ENSPTRG00000004447)	PATE1 (ENSPTRG00000004448) #18	PATE2 (ENSPTRG00000022862) #21	PATE3 (ENSPTRG00000039230) #19	PATE4 (ENSPTRG00000039696) #20	PUS3 (ENSPTRG00000004449) #23	HYLS1 (ENSPTRG00000028362) #22	DDX25 (ENSPTRG00000004450) #24	VSIG10L2 (ENSPTRG00000045947) #25	CDON (ENSPTRG00000004452) #26	ENSPTRG00000050001	RPUSD4 (ENSPTRG00000004454) #27	FAM118B (ENSPTRG00000023950) #28	SRPRA (ENSPTRG00000028360) #30	FOXRED1 (ENSPTRG00000004457) #29	TIRAP (ENSPTRG00000004458) #31	DCPS (ENSPTRG00000004459) #32	ST3GAL4 (ENSPTRG00000004461) #33	KIRREL3 (ENSPTRG00000004462) #34	ENSPTRG00000048532	ETS1 (ENSPTRG00000004466) #35	FLI1 (ENSPTRG00000004467) #36
Orangutan	MODERN SPECIES	2	HEPN1 (ENSPPYG00000004024)	HEPACAM (ENSPPYG00000004025)	CCDC15 (ENSPPYG00000004026)	SLC37A2 (ENSPPYG00000004027)	TMEM218 (ENSPPYG00000004028)	PKNOX2 (ENSPPYG00000004030)	FEZ1 (ENSPPYG00000004031)	EI24 (ENSPPYG00000004033)	STT3A (ENSPPYG00000004034)	ENSPPYG00000004035	ACRV1 (ENSPPYG00000004036)	PATE1 (ENSPPYG00000004037) #18	ENSPPYG00000031717 #13	PATE3 (ENSPPYG00000041702) #19	PATE4 (ENSPPYG00000039363) #20	HYLS1 (ENSPPYG00000004040) #22	PUS3 (ENSPPYG00000004039) #23	DDX25 (ENSPPYG00000004041) #24	VSIG10L2 (ENSPPYG00000033005) #25	CDON (ENSPPYG00000004042) #26	RPUSD4 (ENSPPYG00000004043) #27	FAM118B (ENSPPYG00000004044) #28	SRPRA (ENSPPYG00000004045) #30	FOXRED1 (ENSPPYG00000004046) #29	TIRAP (ENSPPYG00000004047) #31	DCPS (ENSPPYG00000004048) #32	ST3GAL4 (ENSPPYG00000004049) #33	KIRREL3 (ENSPPYG00000004050) #34	ETS1 (ENSPPYG00000004051) #35	FLI1 (ENSPPYG00000004052) #36	KCNJ1 (ENSPPYG00000004053) #37
Gibbon	MODERN SPECIES	5	HEPACAM (ENSNLEG00000007440)	CCDC15 (ENSNLEG00000007445)	SLC37A2 (ENSNLEG00000007446)	ENSNLEG00000033002	PKNOX2 (ENSNLEG00000007448)	FEZ1 (ENSNLEG00000007449)	EI24 (ENSNLEG00000032257)	STT3A (ENSNLEG00000007452)	ENSNLEG00000007453	ACRV1 (ENSNLEG00000007454)	PATE1 (ENSNLEG00000007455) #18	PATE2 (ENSNLEG00000007456) #21	PATE3 (ENSNLEG00000031615) #19	ENSNLEG00000033582 #13	PATE4 (ENSNLEG00000007458) #20	HYLS1 (ENSNLEG00000007459) #22	PUS3 (ENSNLEG00000007460) #23	DDX25 (ENSNLEG00000007461) #24	VSIG10L2 (ENSNLEG00000028921) #25	CDON (ENSNLEG00000007464) #26	RPUSD4 (ENSNLEG00000007465) #27	FAM118B (ENSNLEG00000007466) #28	SRPRA (ENSNLEG00000007467) #30	FOXRED1 (ENSNLEG00000007468) #29	TIRAP (ENSNLEG00000035636) #31	DCPS (ENSNLEG00000033119) #32	ST3GAL4 (ENSNLEG00000007472) #33	KIRREL3 (ENSNLEG00000007473) #34	ENSNLEG00000019250	ETS1 (ENSNLEG00000007477) #35	FLI1 (ENSNLEG00000007479) #36
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924.q #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT00730000112089
Cebidae	ANCESTRAL SPECIES		ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00550000076001 #20	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924.q #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT00730000112089
Marmoset	MODERN SPECIES	2	CCDC15 (ENSCJAG00000008183)	SLC37A2 (ENSCJAG00000008209)	TMEM218 (ENSCJAG00000044833)	PKNOX2 (ENSCJAG00000008279)	FEZ1 (ENSCJAG00000008336)	EI24 (ENSCJAG00000008390)	STT3A (ENSCJAG00000008400)	ACRV1 (ENSCJAG00000044455)	PATE1 (ENSCJAG00000008556) #18	ENSCJAG00000004329 #21	PATE3 (ENSCJAG00000078069) #19	ENSCJAG00000071012 #13	PATE4 (ENSCJAG00000070669) #20	ENSCJAG00000041856	PUS3 (ENSCJAG00000046645) #23	HYLS1 (ENSCJAG00000060937) #22	DDX25 (ENSCJAG00000008600) #24	VSIG10L2 (ENSCJAG00000042439) #25	CDON (ENSCJAG00000008669) #26	ENSCJAG00000044393	RPUSD4 (ENSCJAG00000079280) #27	FAM118B (ENSCJAG00000008701) #28	SRPRA (ENSCJAG00000008752) #30	FOXRED1 (ENSCJAG00000008850) #29	TIRAP (ENSCJAG00000008886) #31	DCPS (ENSCJAG00000008896) #32	ST3GAL4 (ENSCJAG00000008901) #33	KIRREL3 (ENSCJAG00000008996) #34	ETS1 (ENSCJAG00000042683) #35	ENSCJAG00000080255	FLI1 (ENSCJAG00000009034) #36
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b.a.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363 #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Suina	ANCESTRAL SPECIES	5	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.a.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363 #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Pig	MODERN SPECIES	17	TMEM218 (ENSSSCG00000062098)	PKNOX2 (ENSSSCG00000015211)	FEZ1 (ENSSSCG00000015212)	EI24 (ENSSSCG00000015213)	STT3A (ENSSSCG00000015214)	CHEK1 (ENSSSCG00000015215)	ACRV1 (ENSSSCG00000015216)	ENSSSCG00000015217 ##7	ENSSSCG00000046169 ##12	ENSSSCG00000053223 #12	ENSSSCG00000037332 #17	PATE1 (ENSSSCG00000040952) #18	ENSSSCG00000033649 #13	PATE2 (ENSSSCG00000038721) #21	PATE3 (ENSSSCG00000015221) #19	HYLS1 (ENSSSCG00000024913) #22	PUS3 (ENSSSCG00000015222) #23	DDX25 (ENSSSCG00000015223) #24	VSIG10L2 (ENSSSCG00000050125) #25	CDON (ENSSSCG00000022504) #26	RPUSD4 (ENSSSCG00000015233) #27	FAM118B (ENSSSCG00000025806) #28	SRPRA (ENSSSCG00000015227) #30	FOXRED1 (ENSSSCG00000030017) #29	TIRAP (ENSSSCG00000022413) #31	DCPS (ENSSSCG00000015231) #32	ST3GAL4 (ENSSSCG00000015232) #33	KIRREL3 (ENSSSCG00000015234) #34	ENSSSCG00000047091	ETS1 (ENSSSCG00000015235) #35	FLI1 (ENSSSCG00000015237) #36
Chacoan peccary	MODERN SPECIES	80	PKNOX2 (ENSCWAG00000001641)	FEZ1 (ENSCWAG00000001627)	EI24 (ENSCWAG00000001557)	STT3A (ENSCWAG00000001516)	ENSCWAG00000001499	CHEK1 (ENSCWAG00000001382)	ACRV1 (ENSCWAG00000001330)	ENSCWAG00000001318 ##7	ENSCWAG00000001305 ##12	ENSCWAG00000001293 #12	ENSCWAG00000001278 #17	ENSCWAG00000001232 #13	PATE2 (ENSCWAG00000001209) #21	PATE3 (ENSCWAG00000001188) #19	PUS3 (ENSCWAG00000001172) #23	HYLS1 (ENSCWAG00000001160) #22	DDX25 (ENSCWAG00000001123) #24	VSIG10L2 (ENSCWAG00000001081) #25	CDON (ENSCWAG00000001032) #26	RPUSD4 (ENSCWAG00000001010) #27	FAM118B (ENSCWAG00000000994) #28	SRPRA (ENSCWAG00000000935) #30	FOXRED1 (ENSCWAG00000000884) #29	TIRAP (ENSCWAG00000000862) #31	DCPS (ENSCWAG00000000827) #32	ST3GAL4 (ENSCWAG00000000759) #33	KIRREL3 (ENSCWAG00000000605) #34	ETS1 (ENSCWAG00000000482) #35	FLI1 (ENSCWAG00000000388) #36	KCNJ1 (ENSCWAG00000000352) #37	KCNJ5 (ENSCWAG00000000292)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b.a.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.a #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Artiodactyla_b	ANCESTRAL SPECIES	29	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b.a.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.a #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b.a.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b.a.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b.a.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b.a.a.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b.a.a.a ##7	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Narwhal	MODERN SPECIES	314	SLC37A2 (ENSMMNG00015016542)	TMEM218 (ENSMMNG00015016479)	PKNOX2 (ENSMMNG00015016433)	FEZ1 (ENSMMNG00015016381)	EI24 (ENSMMNG00015016319)	STT3A (ENSMMNG00015016232)	CHEK1 (ENSMMNG00015016000)	ACRV1 (ENSMMNG00015015895)	ENSMMNG00015015852 ##7	ENSMMNG00015015810	ENSMMNG00015015778 #12	ENSMMNG00015021185 #17	ENSMMNG00015021176 #18	PATE2 (ENSMMNG00015021167) #21	PATE3 (ENSMMNG00015021157) #19	HYLS1 (ENSMMNG00015021147) #22	PUS3 (ENSMMNG00015021137) #23	DDX25 (ENSMMNG00015021121) #24	CDON (ENSMMNG00015021097) #26	RPUSD4 (ENSMMNG00015021071) #27	FAM118B (ENSMMNG00015021031) #28	SRPRA (ENSMMNG00015020963) #30	FOXRED1 (ENSMMNG00015020867) #29	TIRAP (ENSMMNG00015020849) #31	DCPS (ENSMMNG00015020817) #32	KIRREL3 (ENSMMNG00015020744) #34	ETS1 (ENSMMNG00015020697) #35	FLI1 (ENSMMNG00015020645) #36	KCNJ1 (ENSMMNG00015020626) #37	KCNJ5 (ENSMMNG00015020608)	ARHGAP32 (ENSMMNG00015020492)
Beluga whale	MODERN SPECIES	63	TMEM218 (ENSDLEG00000015416)	PKNOX2 (ENSDLEG00000015412)	FEZ1 (ENSDLEG00000019688)	EI24 (ENSDLEG00000019683)	STT3A (ENSDLEG00000019670)	CHEK1 (ENSDLEG00000019623)	ACRV1 (ENSDLEG00000019608)	ENSDLEG00000019602 ##7	ENSDLEG00000019598 ##7	ENSDLEG00000019593 #12	ENSDLEG00000019586 #12	ENSDLEG00000019584 #17	ENSDLEG00000019580 #18	ENSDLEG00000019572 #13	PATE2 (ENSDLEG00000019569) #21	HYLS1 (ENSDLEG00000019564) #22	PUS3 (ENSDLEG00000019562) #23	DDX25 (ENSDLEG00000019552) #24	CDON (ENSDLEG00000019538) #26	RPUSD4 (ENSDLEG00000019532) #27	FAM118B (ENSDLEG00000019519) #28	SRPRA (ENSDLEG00000019512) #30	FOXRED1 (ENSDLEG00000019504) #29	TIRAP (ENSDLEG00000019501) #31	DCPS (ENSDLEG00000019498) #32	ST3GAL4 (ENSDLEG00000019489) #33	KIRREL3 (ENSDLEG00000019482) #34	ETS1 (ENSDLEG00000019475) #35	FLI1 (ENSDLEG00000019461) #36	KCNJ1 (ENSDLEG00000019453) #37	KCNJ5 (ENSDLEG00000019451)
Vaquita	MODERN SPECIES	19	STT3A (ENSPSNG00000012919)	CHEK1 (ENSPSNG00000012682)	ACRV1 (ENSPSNG00000012592)	ENSPSNG00000012546 ##7	ENSPSNG00000012500 ##7	ENSPSNG00000012397 ##7	ENSPSNG00000012359 ##12	ENSPSNG00000012304 #12	ENSPSNG00000012266 #17	PATE1 (ENSPSNG00000012136) #18	ENSPSNG00000012061 #13	PATE2 (ENSPSNG00000012006) #21	PATE3 (ENSPSNG00000011941) #19	ENSPSNG00000011921	PUS3 (ENSPSNG00000011848) #23	HYLS1 (ENSPSNG00000011819) #22	DDX25 (ENSPSNG00000011674) #24	CDON (ENSPSNG00000011596) #26	RPUSD4 (ENSPSNG00000011529) #27	FAM118B (ENSPSNG00000011429) #28	SRPRA (ENSPSNG00000011327) #30	FOXRED1 (ENSPSNG00000011165) #29	TIRAP (ENSPSNG00000011081) #31	DCPS (ENSPSNG00000010956) #32	ST3GAL4 (ENSPSNG00000010919) #33	KIRREL3 (ENSPSNG00000010533) #34	ETS1 (ENSPSNG00000010028) #35	FLI1 (ENSPSNG00000009843) #36	KCNJ1 (ENSPSNG00000004450) #37	ENSPSNG00000004432	KCNJ5 (ENSPSNG00000004414)
Dolphin	MODERN SPECIES	2644															PUS3 (ENSTTRG00000012167) #23	HYLS1 (ENSTTRG00000012181) #22	DDX25 (ENSTTRG00000012183) #24	CDON (ENSTTRG00000012194) #26
Sperm whale	MODERN SPECIES	7	CCDC15 (ENSPCTG00005015024)	FEZ1 (ENSPCTG00005014954)	EI24 (ENSPCTG00005014514)	STT3A (ENSPCTG00005014137)	ACRV1 (ENSPCTG00005013952)	ENSPCTG00005013844 ##7	ENSPCTG00005013741 ##7	ENSPCTG00005013665 ##7	ENSPCTG00005013624 ##12	ENSPCTG00005013562 #12	ENSPCTG00005013504 #17	PATE1 (ENSPCTG00005013344) #18	ENSPCTG00005013266 #13	PATE2 (ENSPCTG00005013138) #21	PATE3 (ENSPCTG00005013066) #19	HYLS1 (ENSPCTG00005013030) #22	PUS3 (ENSPCTG00005013004) #23	DDX25 (ENSPCTG00005012844) #24	CDON (ENSPCTG00005012699) #26	RPUSD4 (ENSPCTG00005012659) #27	FAM118B (ENSPCTG00005012566) #28	SRPRA (ENSPCTG00005012480) #30	FOXRED1 (ENSPCTG00005012344) #29	TIRAP (ENSPCTG00005012287) #31	ENSPCTG00005012241	DCPS (ENSPCTG00005012123) #32	ST3GAL4 (ENSPCTG00005011862) #33	KIRREL3 (ENSPCTG00005011347) #34	ETS1 (ENSPCTG00005011168) #35	FLI1 (ENSPCTG00005010918) #36	KCNJ1 (ENSPCTG00005010856) #37
Blue whale	MODERN SPECIES	19	PKNOX2 (ENSBMSG00010011900)	FEZ1 (ENSBMSG00010011893)	ENSBMSG00010011882	STT3A (ENSBMSG00010011841)	CHEK1 (ENSBMSG00010011794)	ACRV1 (ENSBMSG00010011774)	ENSBMSG00010011767 ##7	ENSBMSG00010011760 ##7	ENSBMSG00010011750 ##12	ENSBMSG00010011743 #12	ENSBMSG00010011731 #17	PATE1 (ENSBMSG00010011720) #18	ENSBMSG00010011709 #13	PATE2 (ENSBMSG00010011697) #21	PATE3 (ENSBMSG00010011685) #19	HYLS1 (ENSBMSG00010011675) #22	PUS3 (ENSBMSG00010011671) #23	DDX25 (ENSBMSG00010011653) #24	CDON (ENSBMSG00010011634) #26	FAM118B (ENSBMSG00010011597) #28	SRPRA (ENSBMSG00010011589) #30	FOXRED1 (ENSBMSG00010011567) #29	TIRAP (ENSBMSG00010011550) #31	ENSBMSG00010011535	DCPS (ENSBMSG00010011519) #32	ST3GAL4 (ENSBMSG00010011492) #33	KIRREL3 (ENSBMSG00010011431) #34	ETS1 (ENSBMSG00010011360) #35	FLI1 (ENSBMSG00010011314) #36	KCNJ1 (ENSBMSG00010011296) #37	KCNJ5 (ENSBMSG00010011288)
Pecora	ANCESTRAL SPECIES	13	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.a #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	152														ENSCHYG00000014914	ENSCHYG00000014862 #23	ENSCHYG00000014811 #22
Yarkand deer	MODERN SPECIES	151														ENSCHYG00000014531	ENSCHYG00000014506 #23	ENSCHYG00000014475 #22
Percora_a	ANCESTRAL SPECIES	16	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.a #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Bovidae	ANCESTRAL SPECIES	16	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.a #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Caprinae	ANCESTRAL SPECIES	29	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Rambouillet Sheep	MODERN SPECIES	13	SLC37A2 (ENSOARG00020016564)	TMEM218 (ENSOARG00020016756)	PKNOX2 (ENSOARG00020016792)	FEZ1 (ENSOARG00020016876)	EI24 (ENSOARG00020016968)	STT3A (ENSOARG00020017209)	CHEK1 (ENSOARG00020017711)	ACRV1 (ENSOARG00020017966)	SOLD1 (ENSOARG00020018075) ##7	ENSOARG00020018156 ##12	ENSOARG00020006327 #12	ENSOARG00020006351 #17	PATE1 (ENSOARG00020006385) #18	PATE2 (ENSOARG00020006399) #21	PATE3 (ENSOARG00020006485) #19	HYLS1 (ENSOARG00020006556) #22	PUS3 (ENSOARG00020006619) #23	DDX25 (ENSOARG00020006666) #24	VSIG10L2 (ENSOARG00020006806) #25	CDON (ENSOARG00020006906) #26	RPUSD4 (ENSOARG00020007077) #27	FAM118B (ENSOARG00020007129) #28	SRPRA (ENSOARG00020007247) #30	FOXRED1 (ENSOARG00020007489) #29	TIRAP (ENSOARG00020007608) #31	DCPS (ENSOARG00020007638) #32	ST3GAL4 (ENSOARG00020007660) #33	KIRREL3 (ENSOARG00020007855) #34	ETS1 (ENSOARG00020008513) #35	FLI1 (ENSOARG00020008905) #36	KCNJ1 (ENSOARG00020009219) #37
Goat	MODERN SPECIES	21	SLC37A2 (ENSCHIG00000013351)	TMEM218 (ENSCHIG00000025499)	PKNOX2 (ENSCHIG00000021259)	FEZ1 (ENSCHIG00000015748)	EI24 (ENSCHIG00000020494)	STT3A (ENSCHIG00000024693)	CHEK1 (ENSCHIG00000025345)	ACRV1 (ENSCHIG00000023273)	SOLD1 (ENSCHIG00000018973) ##7	ENSCHIG00000010713	ENSCHIG00000022868 #17	PATE1 (ENSCHIG00000010129) #18	PATE2 (ENSCHIG00000021353) #21	PATE3 (ENSCHIG00000010781) #19	PUS3 (ENSCHIG00000012260) #23	HYLS1 (ENSCHIG00000024898) #22	ENSCHIG00000014324 #24	CDON (ENSCHIG00000006678) #26	RPUSD4 (ENSCHIG00000009975) #27	FAM118B (ENSCHIG00000016177) #28	SRPRA (ENSCHIG00000012423) #30	FOXRED1 (ENSCHIG00000017154) #29	TIRAP (ENSCHIG00000025937) #31	DCPS (ENSCHIG00000023271) #32	ST3GAL4 (ENSCHIG00000012632) #33	KIRREL3 (ENSCHIG00000003900) #34	ETS1 (ENSCHIG00000015805) #35	FLI1 (ENSCHIG00000015640) #36	KCNJ1 (ENSCHIG00000016247) #37	KCNJ5 (ENSCHIG00000012884)	ENSCHIG00000021366
Bovinae	ANCESTRAL SPECIES	27	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.a #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00960000189795	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Bos	ANCESTRAL SPECIES	11	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.a #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00960000189795	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b.a.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.a #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00960000189795	ENSGT00940000159519 #35	ENSGT00940000158261 #36
Cow	MODERN SPECIES	21	TMEM218 (ENSBTAG00000022382)	PKNOX2 (ENSBTAG00000000052)	FEZ1 (ENSBTAG00000009124)	EI24 (ENSBTAG00000007202)	STT3A (ENSBTAG00000007203)	CHEK1 (ENSBTAG00000017582)	ACRV1 (ENSBTAG00000033384)	SSLP1 (ENSBTAG00000052794) ##7	ENSBTAG00000023301 ##12	ENSBTAG00000051470 #12	ENSBTAG00000049707 #17	PATE1 (ENSBTAG00000052688) #18	PATE2 (ENSBTAG00000033375) #21	PATE3 (ENSBTAG00000050639) #19	ENSBTAG00000033377 #13	HYLS1 (ENSBTAG00000010859) #22	PUS3 (ENSBTAG00000014339) #23	DDX25 (ENSBTAG00000004266) #24	CDON (ENSBTAG00000009315) #26	RPUSD4 (ENSBTAG00000020900) #27	FAM118B (ENSBTAG00000012169) #28	SRPRA (ENSBTAG00000014105) #30	FOXRED1 (ENSBTAG00000014122) #29	TIRAP (ENSBTAG00000021504) #31	DCPS (ENSBTAG00000002879) #32	ST3GAL4 (ENSBTAG00000016506) #33	KIRREL3 (ENSBTAG00000006804) #34	ENSBTAG00000050013	ENSBTAG00000052770	ETS1 (ENSBTAG00000002341) #35	FLI1 (ENSBTAG00000008283) #36
Hybrid Bos Indicus	MODERN SPECIES	21	FEZ1 (ENSBIXG00005026442)	EI24 (ENSBIXG00005026519)	STT3A (ENSBIXG00005026602)	CHEK1 (ENSBIXG00005026800)	ENSBIXG00005026845	ACRV1 (ENSBIXG00005026890)	ENSBIXG00005026914	ENSBIXG00005026920 ##12	ENSBIXG00005026943 #12	PATE1 (ENSBIXG00005026965) #18	ENSBIXG00005007582 #13	PATE2 (ENSBIXG00005027014) #21	PATE3 (ENSBIXG00005004634) #19	ENSBIXG00005027038 #13	PUS3 (ENSBIXG00005027045) #23	HYLS1 (ENSBIXG00005027065) #22	DDX25 (ENSBIXG00005027130) #24	VSIG10L2 (ENSBIXG00005027178) #25	CDON (ENSBIXG00005027248) #26	RPUSD4 (ENSBIXG00005005612) #27	FAM118B (ENSBIXG00005027365) #28	SRPRA (ENSBIXG00005007778) #30	FOXRED1 (ENSBIXG00005027555) #29	TIRAP (ENSBIXG00005027602) #31	ENSBIXG00005004780 #33	KIRREL3 (ENSBIXG00005028061) #34	ENSBIXG00005028111	ETS1 (ENSBIXG00005028250) #35	ENSBIXG00005028285	FLI1 (ENSBIXG00005007790) #36	KCNJ1 (ENSBIXG00005028469) #37
Bos_a	ANCESTRAL SPECIES	45	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00390000012351	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Wild yak	MODERN SPECIES	2291									ENSBMUG00000000158 ##12	ENSBMUG00000000131 #12	ENSBMUG00000026423 #17	PATE2 (ENSBMUG00000026418) #21	PATE3 (ENSBMUG00000026414) #19	ENSBMUG00000026411	PUS3 (ENSBMUG00000026409) #23	HYLS1 (ENSBMUG00000026410) #22
Domestic yak	MODERN SPECIES	21	SLC37A2 (ENSBGRG00000021440)	PKNOX2 (ENSBGRG00000021171)	FEZ1 (ENSBGRG00000021032)	ENSBGRG00000020849	STT3A (ENSBGRG00000020635)	CHEK1 (ENSBGRG00000020448)	ACRV1 (ENSBGRG00000020380)	ENSBGRG00000020362 ##7	ENSBGRG00000020333 ##12	ENSBGRG00000020246 #12	ENSBGRG00000020215 #17	PATE1 (ENSBGRG00000020170) #18	PATE2 (ENSBGRG00000020078) #21	PATE3 (ENSBGRG00000020018) #19	PUS3 (ENSBGRG00000019983) #23	HYLS1 (ENSBGRG00000019957) #22	DDX25 (ENSBGRG00000019635) #24	VSIG10L2 (ENSBGRG00000019463) #25	CDON (ENSBGRG00000019029) #26	RPUSD4 (ENSBGRG00000018879) #27	FAM118B (ENSBGRG00000018799) #28	SRPRA (ENSBGRG00000018404) #30	FOXRED1 (ENSBGRG00000018192) #29	TIRAP (ENSBGRG00000018128) #31	DCPS (ENSBGRG00000018077) #32	ST3GAL4 (ENSBGRG00000017901) #33	KIRREL3 (ENSBGRG00000017244) #34	KATNBL1 (ENSBGRG00000024952)	ETS1 (ENSBGRG00000024615) #35	FLI1 (ENSBGRG00000024331) #36	KCNJ1 (ENSBGRG00000024284) #37
American bison	MODERN SPECIES	3358	ENSBBBG00000011294	ENSBBBG00000011285	EI24 (ENSBBBG00000002039)	STT3A (ENSBBBG00000008543)	CHEK1 (ENSBBBG00000002011)	ACRV1 (ENSBBBG00000011061)	ENSBBBG00000011050 ##7	ENSBBBG00000011040 ##12	ENSBBBG00000011034 #12	ENSBBBG00000011030 #17	PATE1 (ENSBBBG00000011028) #18	PATE2 (ENSBBBG00000001983) #21	PATE3 (ENSBBBG00000011015) #19	ENSBBBG00000011011	PUS3 (ENSBBBG00000011000) #23	HYLS1 (ENSBBBG00000010989) #22	DDX25 (ENSBBBG00000010985) #24	VSIG10L2 (ENSBBBG00000010972) #25	CDON (ENSBBBG00000010959) #26	RPUSD4 (ENSBBBG00000010938) #27	FAM118B (ENSBBBG00000010923) #28	SRPRA (ENSBBBG00000010892) #30	FOXRED1 (ENSBBBG00000010861) #29	TIRAP (ENSBBBG00000010837) #31	DCPS (ENSBBBG00000007302) #32	ST3GAL4 (ENSBBBG00000010815) #33	KIRREL3 (ENSBBBG00000010758) #34	ENSBBBG00000010718
Siberian musk deer	MODERN SPECIES	1224	TMEM218 (ENSMMSG00000022499)	PKNOX2 (ENSMMSG00000022470)	FEZ1 (ENSMMSG00000022452)	ENSMMSG00000022445	EI24 (ENSMMSG00000022411)	STT3A (ENSMMSG00000022380)	CHEK1 (ENSMMSG00000022326)	ACRV1 (ENSMMSG00000022284)	ENSMMSG00000022270 ##7	ENSMMSG00000022264 ##12	ENSMMSG00000022256 #12	ENSMMSG00000022244 #17	PATE1 (ENSMMSG00000022210) #18	PATE2 (ENSMMSG00000022190) #21	PATE3 (ENSMMSG00000022174) #19	HYLS1 (ENSMMSG00000022160) #22	PUS3 (ENSMMSG00000022148) #23	DDX25 (ENSMMSG00000022122) #24	VSIG10L2 (ENSMMSG00000022093) #25	CDON (ENSMMSG00000022047) #26	RPUSD4 (ENSMMSG00000022017) #27	FAM118B (ENSMMSG00000021979) #28	SRPRA (ENSMMSG00000021898) #30	FOXRED1 (ENSMMSG00000021860) #29	TIRAP (ENSMMSG00000021833) #31	DCPS (ENSMMSG00000021804) #32	ST3GAL4 (ENSMMSG00000021749) #33	ENSMMSG00000021731	KIRREL3 (ENSMMSG00000021518) #34	ETS1 (ENSMMSG00000021421) #35	FLI1 (ENSMMSG00000021311) #36
Camelidae	ANCESTRAL SPECIES	31	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.b #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Arabian camel	MODERN SPECIES	26	FEZ1 (ENSCDRG00005016872)	EI24 (ENSCDRG00005016949)	STT3A (ENSCDRG00005017140)	CHEK1 (ENSCDRG00005017226)	ACRV1 (ENSCDRG00005017376)	ENSCDRG00005017427	ENSCDRG00005017457 ##7	ENSCDRG00005017478 ##12	ENSCDRG00005017501 #12	ENSCDRG00005017526 #17	PATE1 (ENSCDRG00005017553) #18	ENSCDRG00005017573 #13	PATE2 (ENSCDRG00005017607) #21	PATE3 (ENSCDRG00005017642) #19	PUS3 (ENSCDRG00005017661) #23	HYLS1 (ENSCDRG00005017678) #22	DDX25 (ENSCDRG00005017696) #24	VSIG10L2 (ENSCDRG00005017751) #25	CDON (ENSCDRG00005017804) #26	RPUSD4 (ENSCDRG00005017914) #27	FAM118B (ENSCDRG00005017951) #28	SRPRA (ENSCDRG00005018025) #30	FOXRED1 (ENSCDRG00005018201) #29	TIRAP (ENSCDRG00005018300) #31	DCPS (ENSCDRG00005018334) #32	ST3GAL4 (ENSCDRG00005018408) #33	KIRREL3 (ENSCDRG00005018534) #34	ETS1 (ENSCDRG00005018815) #35	FLI1 (ENSCDRG00005018918) #36	KCNJ1 (ENSCDRG00005019169) #37	KCNJ5 (ENSCDRG00005005404)
Alpaca	MODERN SPECIES	2693															PUS3 (ENSVPAG00000001495) #23	HYLS1 (ENSVPAG00000001503) #22	DDX25 (ENSVPAG00000001505) #24	CDON (ENSVPAG00000001509) #26
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Carnivora	ANCESTRAL SPECIES	21	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Ursidae	ANCESTRAL SPECIES	15	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Ursus	ANCESTRAL SPECIES	71	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
American black bear	MODERN SPECIES	4298																HYLS1 (ENSUAMG00000009294) #22	ENSUAMG00000009287 #24
Polar bear	MODERN SPECIES	149	TMEM218 (ENSUMAG00000001613)	PKNOX2 (ENSUMAG00000001626)	FEZ1 (ENSUMAG00000001652)	EI24 (ENSUMAG00000001674)	STT3A (ENSUMAG00000001686)	CHEK1 (ENSUMAG00000001696)	ACRV1 (ENSUMAG00000001703)	ENSUMAG00000001716 ##7	ENSUMAG00000001720 ##12	ENSUMAG00000001731 #12	ENSUMAG00000001738 #17	ENSUMAG00000001747 #13	PATE2 (ENSUMAG00000001763) #21	PATE3 (ENSUMAG00000001775) #19	ENSUMAG00000001785 #13	HYLS1 (ENSUMAG00000001791) #22	PUS3 (ENSUMAG00000001795) #23	DDX25 (ENSUMAG00000001803) #24	CDON (ENSUMAG00000001889) #26	RPUSD4 (ENSUMAG00000002219) #27	FAM118B (ENSUMAG00000002230) #28	SRPRA (ENSUMAG00000002269) #30	FOXRED1 (ENSUMAG00000002485) #29	TIRAP (ENSUMAG00000002495) #31	DCPS (ENSUMAG00000002520) #32	ST3GAL4 (ENSUMAG00000002531) #33	KIRREL3 (ENSUMAG00000002585) #34	ENSUMAG00000002879	ETS1 (ENSUMAG00000002889) #35	FLI1 (ENSUMAG00000002908) #36	KCNJ1 (ENSUMAG00000002933) #37
Giant Panda	MODERN SPECIES	18	SLC37A2 (ENSAMEG00000000898)	TMEM218 (ENSAMEG00000000926)	PKNOX2 (ENSAMEG00000000930)	FEZ1 (ENSAMEG00000000967)	EI24 (ENSAMEG00000000990)	STT3A (ENSAMEG00000001018)	CHEK1 (ENSAMEG00000001064)	ACRV1 (ENSAMEG00000001069)	ENSAMEG00000000154 ##12	ENSAMEG00000030552 #17	ENSAMEG00000030750 #18	ENSAMEG00000030867 #13	PATE2 (ENSAMEG00000030538) #21	PATE3 (ENSAMEG00000026847) #19	ENSAMEG00000000151 #13	HYLS1 (ENSAMEG00000030606) #22	PUS3 (ENSAMEG00000000144) #23	DDX25 (ENSAMEG00000000138) #24	CDON (ENSAMEG00000000130) #26	ENSAMEG00000000127 #27	FAM118B (ENSAMEG00000000125) #28	SRPRA (ENSAMEG00000000117) #30	FOXRED1 (ENSAMEG00000000116) #29	TIRAP (ENSAMEG00000000115) #31	DCPS (ENSAMEG00000000111) #32	ST3GAL4 (ENSAMEG00000000106) #33	KIRREL3 (ENSAMEG00000000102) #34	ETS1 (ENSAMEG00000002585) #35	FLI1 (ENSAMEG00000025623) #36	KCNJ1 (ENSAMEG00000019148) #37	KCNJ5 (ENSAMEG00000002556)
Mustelinae	ANCESTRAL SPECIES	24	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.B ##12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34
American mink	DUPLICATION
American mink	MODERN SPECIES	229	PKNOX2 (ENSNVIG00000020415)	FEZ1 (ENSNVIG00000020397)	EI24 (ENSNVIG00000020350)	STT3A (ENSNVIG00000020278)	CHK1 (ENSNVIG00000020144)	ACRV1 (ENSNVIG00000020120)	ENSNVIG00000020113 ##7	ENSNVIG00000020106 ##12	ENSNVIG00000020100 #17	PATE1 (ENSNVIG00000020091) #18	ENSNVIG00000020087 #13	PATE2 (ENSNVIG00000020075) #21	PATE3 (ENSNVIG00000020068) #19	ENSNVIG00000020064 #13	ENSNVIG00000020061	ENSNVIG00000020054 #22	PUS3 (ENSNVIG00000020049) #23	DDX25 (ENSNVIG00000019998) #24	VSIG10L2 (ENSNVIG00000019971) #25	CDON (ENSNVIG00000019901) #26	RPUSD4 (ENSNVIG00000019884) #27	FAM118B (ENSNVIG00000019829) #28	SRPRA (ENSNVIG00000019747) #30	FOXRED1 (ENSNVIG00000019663) #29	TIRAP (ENSNVIG00000019633) #31	DCPS (ENSNVIG00000019627) #32	SIA4C (ENSNVIG00000019602) #33	KIRREL3 (ENSNVIG00000019510) #34
American mink	MODERN SPECIES	177											KLKB1 (ENSNVIG00000020383)	F11 (ENSNVIG00000020407)	MTNR1A (ENSNVIG00000020442)	FAT1 (ENSNVIG00000020460)	ENSNVIG00000020541	ENSNVIG00000020552 #22	ENSNVIG00000020561	TRIML2 (ENSNVIG00000020575)	TRIML1 (ENSNVIG00000020601)	ENSNVIG00000020639	FRG1 (ENSNVIG00000020655)	ASAH1 (ENSNVIG00000020695)	PCM1 (ENSNVIG00000021043)	FGL1 (ENSNVIG00000021175)	MTUS1 (ENSNVIG00000021245)	ENSNVIG00000021458	PDGFRL (ENSNVIG00000021467)
Ferret	MODERN SPECIES	188	ROBO3 (ENSMPUG00000006103)	ROBO4 (ENSMPUG00000006238)	HEPACAM (ENSMPUG00000006255)	CCDC15 (ENSMPUG00000006289)	SLC37A2 (ENSMPUG00000006302)	TMEM218 (ENSMPUG00000006437)	PKNOX2 (ENSMPUG00000006449)	FEZ1 (ENSMPUG00000006461)	EI24 (ENSMPUG00000006470)	STT3A (ENSMPUG00000006479)	CHEK1 (ENSMPUG00000006494)	ACRV1 (ENSMPUG00000006507)	ENSMPUG00000006544 #18	ENSMPUG00000006549 #13	ENSMPUG00000018414	HYLS1 (ENSMPUG00000006559) #22	PUS3 (ENSMPUG00000006568) #23	DDX25 (ENSMPUG00000006577) #24	CDON (ENSMPUG00000006591) #26	RPUSD4 (ENSMPUG00000006608) #27	FAM118B (ENSMPUG00000006617) #28	SRPRA (ENSMPUG00000006626) #30	FOXRED1 (ENSMPUG00000006635) #29	TIRAP (ENSMPUG00000006645) #31	DCPS (ENSMPUG00000006653) #32	ST3GAL4 (ENSMPUG00000006700) #33	KIRREL3 (ENSMPUG00000006711) #34	ENSMPUG00000006722
Canidae	ANCESTRAL SPECIES	27	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Canis_lupus	ANCESTRAL SPECIES	28	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Dog	MODERN SPECIES	33	PKNOX2 (ENSCAFG00845011164)	FEZ1 (ENSCAFG00845011053)	EI24 (ENSCAFG00845010949)	STT3A (ENSCAFG00845010774)	CHEK1 (ENSCAFG00845010598)	ACRV1 (ENSCAFG00845010520)	ENSCAFG00845010479 ##7	ENSCAFG00845010451 ##12	ENSCAFG00845010435 #12	ENSCAFG00845010399 #17	PATE1 (ENSCAFG00845010371) #18	ENSCAFG00845010348 #13	PATE2 (ENSCAFG00845010327) #21	PATE3 (ENSCAFG00845010295) #19	ENSCAFG00845010275 #13	HYLS1 (ENSCAFG00845010259) #22	PUS3 (ENSCAFG00845010225) #23	DDX25 (ENSCAFG00845010150) #24	CDON (ENSCAFG00845009814) #26	RPUSD4 (ENSCAFG00845009694) #27	FAM118B (ENSCAFG00845009624) #28	SRPRA (ENSCAFG00845009534) #30	FOXRED1 (ENSCAFG00845009437) #29	TIRAP (ENSCAFG00845009385) #31	DCPS (ENSCAFG00845009346) #32	ST3GAL4 (ENSCAFG00845009303) #33	KIRREL3 (ENSCAFG00845009016) #34	ETS1 (ENSCAFG00845008749) #35	FLI1 (ENSCAFG00845008397) #36	KCNJ1 (ENSCAFG00845008225) #37	ENSCAFG00845008211
Dingo	MODERN SPECIES	214	ENSCAFG00020010749	ENSCAFG00020010736	STT3A (ENSCAFG00020010731)	CHEK1 (ENSCAFG00020010694)	ACRV1 (ENSCAFG00020010685)	ENSCAFG00020010684	ENSCAFG00020010682 ##7	ENSCAFG00020010675 ##12	ENSCAFG00020010674 #12	ENSCAFG00020010671 #17	ENSCAFG00020010669 #13	PATE2 (ENSCAFG00020010668) #21	PATE3 (ENSCAFG00020010665) #19	ENSCAFG00020010661 #13	PUS3 (ENSCAFG00020010659) #23	HYLS1 (ENSCAFG00020010655) #22	DDX25 (ENSCAFG00020010651) #24	CDON (ENSCAFG00020010636) #26	RPUSD4 (ENSCAFG00020010621) #27	FAM118B (ENSCAFG00020010617) #28	SRPRA (ENSCAFG00020010608) #30	FOXRED1 (ENSCAFG00020010605) #29	TIRAP (ENSCAFG00020010602) #31	DCPS (ENSCAFG00020010596) #32	ST3GAL4 (ENSCAFG00020010584) #33	KIRREL3 (ENSCAFG00020010573) #34	ENSCAFG00020010494 #35	FLI1 (ENSCAFG00020010486) #36	KCNJ1 (ENSCAFG00020010482) #37	KCNJ5 (ENSCAFG00020010479)	ARHGAP32 (ENSCAFG00020010347)
Red fox	MODERN SPECIES	29	FEZ1 (ENSVVUG00000020488)	EI24 (ENSVVUG00000020480)	STT3A (ENSVVUG00000020473)	CHEK1 (ENSVVUG00000020224)	ACRV1 (ENSVVUG00000020213)	ENSVVUG00000020203	ENSVVUG00000020200 ##7	ENSVVUG00000020189 ##12	ENSVVUG00000020185 #12	ENSVVUG00000020180 #17	PATE1 (ENSVVUG00000020176) #18	ENSVVUG00000020173 #13	PATE2 (ENSVVUG00000020169) #21	PATE3 (ENSVVUG00000020167) #19	ENSVVUG00000020163 #13	HYLS1 (ENSVVUG00000020160) #22	PUS3 (ENSVVUG00000020152) #23	DDX25 (ENSVVUG00000020142) #24	CDON (ENSVVUG00000020109) #26	RPUSD4 (ENSVVUG00000020101) #27	FAM118B (ENSVVUG00000020098) #28	SRPRA (ENSVVUG00000020094) #30	FOXRED1 (ENSVVUG00000020089) #29	ENSVVUG00000020087 #31	DCPS (ENSVVUG00000020085) #32	ST3GAL4 (ENSVVUG00000020081) #33	KIRREL3 (ENSVVUG00000020073) #34	ETS1 (ENSVVUG00000020004) #35	FLI1 (ENSVVUG00000019992) #36	KCNJ1 (ENSVVUG00000019986) #37	KCNJ5 (ENSVVUG00000019982)
Felidae	ANCESTRAL SPECIES		ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Panthera	ANCESTRAL SPECIES	23							ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b
Tiger	MODERN SPECIES	173										ENSPTIG00000011363 #12	ENSPTIG00000010870 #17	PATE1 (ENSPTIG00000010013) #18	PATE2 (ENSPTIG00000008468) #21	PATE3 (ENSPTIG00000007797) #19	ENSPTIG00000007358 #13	HYLS1 (ENSPTIG00000005712) #22	PUS3 (ENSPTIG00000001192) #23	DDX25 (ENSPTIG00000018953) #24	VSIG10L2 (ENSPTIG00000018101) #25	CDON (ENSPTIG00000013079) #26	RPUSD4 (ENSPTIG00000012059) #27	FAM118B (ENSPTIG00000009883) #28	SRPRA (ENSPTIG00000006989) #30	FOXRED1 (ENSPTIG00000005739) #29	TIRAP (ENSPTIG00000000582) #31	DCPS (ENSPTIG00000021939) #32	ST3GAL4 (ENSPTIG00000016621) #33	KIRREL3 (ENSPTIG00000011714) #34	ETS1 (ENSPTIG00000021420) #35	FLI1 (ENSPTIG00000017957) #36	KCNJ1 (ENSPTIG00000017138) #37
Panthera_a	ANCESTRAL SPECIES	24								ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363.c #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363.d #13	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
lion	MODERN SPECIES	10	NRGN (ENSPLOG00000007734)	VSIG2 (ENSPLOG00000007758)	ESAM (ENSPLOG00000007796)	MSANTD2 (ENSPLOG00000007835)	ROBO3 (ENSPLOG00000007890)	ROBO4 (ENSPLOG00000008054)	HEPACAM (ENSPLOG00000008223)	CCDC15 (ENSPLOG00000008286)	SLC37A2 (ENSPLOG00000008333)	TMEM218 (ENSPLOG00000008382)	PKNOX2 (ENSPLOG00000008417)	FEZ1 (ENSPLOG00000008483)	EI24 (ENSPLOG00000008558)	STT3A (ENSPLOG00000008673)	CHEK1 (ENSPLOG00000008775)	HYLS1 (ENSPLOG00000009006) #22	PUS3 (ENSPLOG00000009029) #23	DDX25 (ENSPLOG00000009065) #24	VSIG10L2 (ENSPLOG00000009191) #25	CDON (ENSPLOG00000009274) #26	RPUSD4 (ENSPLOG00000009314) #27	FAM118B (ENSPLOG00000009436) #28	SRPRA (ENSPLOG00000009505) #30	FOXRED1 (ENSPLOG00000009667) #29	TIRAP (ENSPLOG00000009748) #31	DCPS (ENSPLOG00000009768) #32	ST3GAL4 (ENSPLOG00000009837) #33	KIRREL3 (ENSPLOG00000010084) #34	ENSPLOG00000010342	ETS1 (ENSPLOG00000010415) #35	FLI1 (ENSPLOG00000010557) #36
leopard	MODERN SPECIES	85						ENSPPRG00000007260 ##12	ENSPPRG00000007233 #12	ENSPPRG00000007214 #12	ENSPPRG00000006926 #17	PATE1 (ENSPPRG00000006809) #18	PATE2 (ENSPPRG00000006144) #21	PATE3 (ENSPPRG00000005889) #19	ENSPPRG00000005781 #13	ENSPPRG00000005737	PUS3 (ENSPPRG00000005662) #23	HYLS1 (ENSPPRG00000015126) #22	DDX25 (ENSPPRG00000005392) #24	VSIG10L2 (ENSPPRG00000004862) #25	CDON (ENSPPRG00000004720) #26	RPUSD4 (ENSPPRG00000003081) #27	FAM118B (ENSPPRG00000002583) #28	SRPRA (ENSPPRG00000001542) #30	FOXRED1 (ENSPPRG00000000073) #29	TIRAP (ENSPPRG00000022828) #31	DCPS (ENSPPRG00000023157) #32	ENSPPRG00000023463	ST3GAL4 (ENSPPRG00000024002) #33	KIRREL3 (ENSPPRG00000024377) #34	ENSPPRG00000017988	ETS1 (ENSPPRG00000015595) #35	FLI1 (ENSPPRG00000011704) #36
Cat	MODERN SPECIES	241	ROBO3 (ENSFCAG00000006751)	ROBO4 (ENSFCAG00000006753)	HEPACAM (ENSFCAG00000006755)	CCDC15 (ENSFCAG00000027764)	SLC37A2 (ENSFCAG00000015334)	TMEM218 (ENSFCAG00000015332)	PKNOX2 (ENSFCAG00000015096)	FEZ1 (ENSFCAG00000028004)	EI24 (ENSFCAG00000015100)	STT3A (ENSFCAG00000015102)	CHEK1 (ENSFCAG00000015103)	ENSFCAG00000046038	ENSFCAG00000039307 ##7	PATE2 (ENSFCAG00000046618) #21	PATE3 (ENSFCAG00000040318) #19	HYLS1 (ENSFCAG00000042201) #22	PUS3 (ENSFCAG00000005340) #23	DDX25 (ENSFCAG00000005341) #24	VSIG10L2 (ENSFCAG00000041620) #25	CDON (ENSFCAG00000005342) #26	RPUSD4 (ENSFCAG00000029789) #27	FAM118B (ENSFCAG00000005343) #28	SRPRA (ENSFCAG00000011274) #30	FOXRED1 (ENSFCAG00000004180) #29	TIRAP (ENSFCAG00000046185) #31	ST3GAL4 (ENSFCAG00000011276) #33	KIRREL3 (ENSFCAG00000011277) #34	ENSFCAG00000050856	ETS1 (ENSFCAG00000018598) #35	FLI1 (ENSFCAG00000042373) #36	KCNJ1 (ENSFCAG00000013060) #37
Laurasiatheria_c	ANCESTRAL SPECIES	23	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00940000163158.b.b ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363 #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Equus	ANCESTRAL SPECIES	25	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.b.c.a ##7	ENSGT00940000163158.b.b.c.b.a ##7	ENSGT00510000050146.B ##12	ENSGT00940000163158.b.b.c.b.b ##7	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00510000050363 #13	ENSGT00940000161017.d	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428.a #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Donkey	MODERN SPECIES	12	ENSEASG00005001831	ENSEASG00005001837 #12	ENSEASG00005001821 #17	PATE1 (ENSEASG00005029891) #18	PATE2 (ENSEASG00005034862) #21	ENSEASG00005031413 #19	ENSEASG00005027879 #13	ENSEASG00005001784	ENSEASG00005031700	ENSEASG00005027342	ENSEASG00005028844	ENSEASG00005023004	ENSEASG00005036826	ENSEASG00005027056	PUS3 (ENSEASG00005023003) #23	HYLS1 (ENSEASG00005032143) #22	DDX25 (ENSEASG00005023001) #24	VSIG10L2 (ENSEASG00005033108) #25	CDON (ENSEASG00005022988) #26	RPUSD4 (ENSEASG00005022982) #27	FAM118B (ENSEASG00005022981) #28	SRPRA (ENSEASG00005022980) #30	FOXRED1 (ENSEASG00005022979) #29	ENSEASG00005022978 #31	DCPS (ENSEASG00005022977) #32	ST3GAL4 (ENSEASG00005022975) #33	KIRREL3 (ENSEASG00005022973) #34	ETS1 (ENSEASG00005022967) #35	FLI1 (ENSEASG00005022961) #36	KCNJ1 (ENSEASG00005030239) #37	KCNJ5 (ENSEASG00005022958)
Horse	MODERN SPECIES	28	ENSECAG00000047516	ENSECAG00000054565 ##7	ENSECAG00000018486 #12	PATE1 (ENSECAG00000018504) #18	PATE2 (ENSECAG00000020423) #21	PATE3 (ENSECAG00000037530) #19	ENSECAG00000031647 #13	ENSECAG00000035605	ENSECAG00000021090	ENSECAG00000057382	ENSECAG00000047458	ENSECAG00000021268	ENSECAG00000031671	ENSECAG00000043008	PUS3 (ENSECAG00000007581) #23	HYLS1 (ENSECAG00000006921) #22	DDX25 (ENSECAG00000009643) #24	VSIG10L2 (ENSECAG00000040825) #25	CDON (ENSECAG00000017335) #26	RPUSD4 (ENSECAG00000000557) #27	FAM118B (ENSECAG00000005590) #28	SRPRA (ENSECAG00000014692) #30	FOXRED1 (ENSECAG00000022359) #29	DCPS (ENSECAG00000012956) #32	TIRAP (ENSECAG00000049250) #31	ST3GAL4 (ENSECAG00000017156) #33	KIRREL3 (ENSECAG00000024599) #34	ETS1 (ENSECAG00000010897) #35	FLI1 (ENSECAG00000021051) #36	KCNJ1 (ENSECAG00000024963) #37	KCNJ5 (ENSECAG00000025007)
Chiroptera	ANCESTRAL SPECIES	52	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363 #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126.b #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Microchiroptera	ANCESTRAL SPECIES	9	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00940000163158.b.a ##7	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000050363 #13	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126.b #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Greater horseshoe bat	MODERN SPECIES	17	SLC37A2 (ENSRFEG00010007767)	TMEM218 (ENSRFEG00010007872)	PKNOX2 (ENSRFEG00010007936)	FEZ1 (ENSRFEG00010007983)	STT3A (ENSRFEG00010008084)	CHEK1 (ENSRFEG00010008393)	ACRV1 (ENSRFEG00010008599)	ENSRFEG00010008634	ENSRFEG00010008659 ##12	ENSRFEG00010008693 #12	ENSRFEG00010008740 #17	PATE1 (ENSRFEG00010008784) #18	ENSRFEG00010008889 #13	PATE2 (ENSRFEG00010008944) #21	PATE3 (ENSRFEG00010009006) #19	HYLS1 (ENSRFEG00010009048) #22	PUS3 (ENSRFEG00010009079) #23	DDX25 (ENSRFEG00010009110) #24	VSIG10L2 (ENSRFEG00010009174) #25	CDON (ENSRFEG00010009272) #26	RPUSD4 (ENSRFEG00010009341) #27	FAM118B (ENSRFEG00010009373) #28	SRPRA (ENSRFEG00010009473) #30	FOXRED1 (ENSRFEG00010009652) #29	TIRAP (ENSRFEG00010009793) #31	DCPS (ENSRFEG00010009838) #32	ST3GAL4 (ENSRFEG00010009892) #33	KIRREL3 (ENSRFEG00010010202) #34	ENSRFEG00010010506	ENSRFEG00010010555	ETS1 (ENSRFEG00010010620) #35
Microbat	MODERN SPECIES	1319	HEPACAM (ENSMLUG00000027103)	CCDC15 (ENSMLUG00000008581)	SLC37A2 (ENSMLUG00000008616)	TMEM218 (ENSMLUG00000008641)	PKNOX2 (ENSMLUG00000002240)	FEZ1 (ENSMLUG00000002246)	ENSMLUG00000027536	EI24 (ENSMLUG00000001583)	STT3A (ENSMLUG00000006126)	CHEK1 (ENSMLUG00000005817)	ACRV1 (ENSMLUG00000007574)	ENSMLUG00000024265 ##7	ENSMLUG00000017478 #12	ENSMLUG00000022927 #13	PUS3 (ENSMLUG00000030636) #23	HYLS1 (ENSMLUG00000008716) #22	DDX25 (ENSMLUG00000008700) #24	CDON (ENSMLUG00000017324) #26
Megabat	MODERN SPECIES	4658																HYLS1 (ENSPVAG00000016529) #22
Eulipotyphla	ANCESTRAL SPECIES	301															ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000157114 #26
Hedgehog	MODERN SPECIES	12843															PUS3 (ENSEEUG00000010543) #23	HYLS1 (ENSEEUG00000010575) #22
Common shrew	MODERN SPECIES	6556															PUS3 (ENSSARG00000013826) #23	HYLS1 (ENSSARG00000013831) #22	DDX25 (ENSSARG00000013832) #24
Atlantogenata	ANCESTRAL SPECIES	65	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629 #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37
Afrotheria	ANCESTRAL SPECIES	84	ENSGT00390000013593	ENSGT00940000155457	ENSGT00940000161382	ENSGT01100000263551.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b	ENSGT00940000154313.d
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	18037																ENSETEG00000015477 #22
Tenrec	MODERN SPECIES	9643																ENSETEG00000019312 #22
Afrotheria_a	ANCESTRAL SPECIES	86	ENSGT00390000013593	ENSGT00940000155457	ENSGT00940000161382	ENSGT01100000263551.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050363 #13	ENSGT00950000183160.A #23	ENSGT00390000008848 #22	ENSGT00940000159712 #24	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34	ENSGT00940000159519 #35	ENSGT00940000158261 #36	ENSGT00990000203615.b.b #37	ENSGT01080000257365.b.a.b.a.b	ENSGT00940000154313.d
Elephant	MODERN SPECIES	429	MSANTD2 (ENSLAFG00000008983)	ROBO3 (ENSLAFG00000031269)	ROBO4 (ENSLAFG00000014592)	HEPACAM (ENSLAFG00000014605)	CCDC15 (ENSLAFG00000027256)	ENSLAFG00000017317	TMEM218 (ENSLAFG00000017335)	PKNOX2 (ENSLAFG00000010875)	FEZ1 (ENSLAFG00000010884)	EI24 (ENSLAFG00000010888)	STT3A (ENSLAFG00000010894)	CHEK1 (ENSLAFG00000022165)	ACRV1 (ENSLAFG00000013378)	ENSLAFG00000030114 #13	PUS3 (ENSLAFG00000000535) #23	HYLS1 (ENSLAFG00000027766) #22	DDX25 (ENSLAFG00000000532) #24	CDON (ENSLAFG00000008045) #26	RPUSD4 (ENSLAFG00000005211) #27	FAM118B (ENSLAFG00000010248) #28	SRPRA (ENSLAFG00000010252) #30	FOXRED1 (ENSLAFG00000010256) #29	TIRAP (ENSLAFG00000010260) #31	DCPS (ENSLAFG00000006052) #32	ST3GAL4 (ENSLAFG00000001862) #33	KIRREL3 (ENSLAFG00000001864) #34	ENSLAFG00000029954	ETS1 (ENSLAFG00000030068) #35	FLI1 (ENSLAFG00000013824) #36	KCNJ1 (ENSLAFG00000005037) #37	KCNJ5 (ENSLAFG00000027858)
Xenarthra	ANCESTRAL SPECIES	24	ENSGT00940000158657	ENSGT00390000016247	ENSGT00940000158793	ENSGT00390000017627.b	ENSGT00390000018633	ENSGT00940000156655	ENSGT00940000159682	ENSGT00940000162351	ENSGT00510000050146.B ##12	ENSGT00510000050146.A #12	ENSGT01100000263629 #15	ENSGT00670000099394 #17	ENSGT00390000012586 #18	ENSGT00510000048956 #21	ENSGT00690000102487 #19	ENSGT00390000008848 #22	ENSGT00950000183160.A #23	ENSGT00940000159712 #24	ENSGT00940000163088 #25	ENSGT00940000157114 #26	ENSGT00940000158436 #27	ENSGT00390000010215.B #28	ENSGT00550000074936 #30	ENSGT00390000006114 #29	ENSGT00510000048428 #31	ENSGT00390000003924 #32	ENSGT00940000158893 #33	ENSGT00940000157126 #34
Armadillo	MODERN SPECIES	2627	TMEM218 (ENSDNOG00000011351)	PKNOX2 (ENSDNOG00000006362)	FEZ1 (ENSDNOG00000002528)	ENSDNOG00000002362	STT3A (ENSDNOG00000009724)	CHEK1 (ENSDNOG00000036059)	ACRV1 (ENSDNOG00000032692)	ENSDNOG00000044360 ##12	ENSDNOG00000040014 #12	ENSDNOG00000032899 #15	ENSDNOG00000040324 #15	ENSDNOG00000047952 #17	PATE1 (ENSDNOG00000011661) #18	PATE2 (ENSDNOG00000017747) #21	PATE3 (ENSDNOG00000032235) #19	HYLS1 (ENSDNOG00000002867) #22	PUS3 (ENSDNOG00000040719) #23	DDX25 (ENSDNOG00000007989) #24	ENSDNOG00000034432 #25	ENSDNOG00000040955	CDON (ENSDNOG00000008000) #26	RPUSD4 (ENSDNOG00000020026) #27	FAM118B (ENSDNOG00000010808) #28	SRPRA (ENSDNOG00000010821) #30	FOXRED1 (ENSDNOG00000009712) #29	TIRAP (ENSDNOG00000042393) #31	DCPS (ENSDNOG00000003974) #32	ST3GAL4 (ENSDNOG00000030902) #33	KIRREL3 (ENSDNOG00000019923) #34