Euteleostomi	ANCESTRAL SPECIES	1	ENSGT00970000198259	ENSGT00960000190754	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01080000257410.A.f ##18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00940000175463	ENSGT00390000005869.b #29	ENSGT00510000046406	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00950000182858.D	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00940000175463	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00390000015874	ENSGT00970000198259	ENSGT00960000190754	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00940000175463	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Amniota	ANCESTRAL SPECIES	4	ENSGT00970000198259	ENSGT00960000190754	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00940000175463	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35
Mammalia	ANCESTRAL SPECIES	5	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373
Theria	ANCESTRAL SPECIES	11	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373
Eutheria	ANCESTRAL SPECIES	6	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36
Glires	ANCESTRAL SPECIES	7	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36
Lagomorpha	ANCESTRAL SPECIES	52						ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.s #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Rabbit	MODERN SPECIES	2	EFNA5 (ENSOCUG00000016107) #7	ENSOCUG00000035176 #8	ENSOCUG00000037124 #9	ENSOCUG00000025766 #10	ENSOCUG00000024359 #11	NUDT12 (ENSOCUG00000017632) #12	ENSOCUG00000022102 #13	MACIR (ENSOCUG00000022010) #14	PPIP5K2 (ENSOCUG00000001610) #15	GIN1 (ENSOCUG00000025993) #16	PAM (ENSOCUG00000001598) #17	SLCO6A1 (ENSOCUG00000003393) #18	SLCO4C1 (ENSOCUG00000016948) #19	ENSOCUG00000027390 #20	ENSOCUG00000035604 #21	ST8SIA4 (ENSOCUG00000007922) #22	FAM174A (ENSOCUG00000007657) #23	ENSOCUG00000031872 #24	CHD1 (ENSOCUG00000004434) #25	ENSOCUG00000029913 #26	RGMB (ENSOCUG00000000159) #27	RIOK2 (ENSOCUG00000001656) #28	ENSOCUG00000001655 #29	LNPEP (ENSOCUG00000001651) #30	ERAP1 (ENSOCUG00000007820) #31	CAST (ENSOCUG00000007802) #32	PCSK1 (ENSOCUG00000012155) #33	ELL2 (ENSOCUG00000007162) #34	ENSOCUG00000015853 #35	RHOBTB3 (ENSOCUG00000015845) #36	SPATA9 (ENSOCUG00000025805) #37
Pika	MODERN SPECIES	333																ST8SIA4 (ENSOPRG00000003605) #22
Rodentia	ANCESTRAL SPECIES	7	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B	ENSGT01050000244841.B.b
Kangaroo rat	MODERN SPECIES	378						ENSDORG00000024578	ENSDORG00000012172	Nudt12 (ENSDORG00000012388) #12	ENSDORG00000028046 #13	Macir (ENSDORG00000023677) #14	Ppip5k2 (ENSDORG00000004885) #15	Gin1 (ENSDORG00000010935) #16	Pam (ENSDORG00000010354) #17	Slco4c1 (ENSDORG00000004651) #19	ENSDORG00000011959	St8sia4 (ENSDORG00000023183) #22	ENSDORG00000029536	Chd1 (ENSDORG00000015830) #25	Rgmb (ENSDORG00000003576) #27	Riok2 (ENSDORG00000016345) #28	Lix1 (ENSDORG00000006454) #29	Lnpep (ENSDORG00000004208) #30	Erap1 (ENSDORG00000000810) #31	ENSDORG00000000791 #32	Pcsk1 (ENSDORG00000000762) #33	ENSDORG00000028314	Ell2 (ENSDORG00000005531) #34	Glrx (ENSDORG00000002345) #35	Rhobtb3 (ENSDORG00000002343) #36	Spata9 (ENSDORG00000003706) #37	Rfesd (ENSDORG00000026259)
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B	ENSGT01050000244841.B.b
Muroidea	ANCESTRAL SPECIES	4	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B	ENSGT01050000244841.B.b
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000154799	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d.b #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059.z
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00940000154799	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d.a #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059.z
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000155702	ENSGT00940000154799	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059.z
Golden Hamster	MODERN SPECIES	686	Rab31 (ENSMAUG00000012455)	Vapa (ENSMAUG00000010685)	Tmem232 (ENSMAUG00000005921)	Man2a1 (ENSMAUG00000009799)	Pja2 (ENSMAUG00000011890)	Fer (ENSMAUG00000016263)	ENSMAUG00000012566	Efna5 (ENSMAUG00000016198) #7	Nudt12 (ENSMAUG00000010818) #12	ENSMAUG00000018117 #13	Macir (ENSMAUG00000013352) #14	Gin1 (ENSMAUG00000014864) #16	Pam (ENSMAUG00000013243) #17	ENSMAUG00000016737	Slco4c1 (ENSMAUG00000016086) #19	St8sia4 (ENSMAUG00000008068) #22	Fam174a (ENSMAUG00000010921) #23	Pdcd1 (ENSMAUG00000000914)	Neu4 (ENSMAUG00000004468)	ENSMAUG00000018549	ENSMAUG00000006662	D2hgdh (ENSMAUG00000008991)	Ing5 (ENSMAUG00000010995)	ENSMAUG00000012792	Dtymk (ENSMAUG00000000268)	Atg4b (ENSMAUG00000002031)	ENSMAUG00000009008	Bok (ENSMAUG00000011149)	Stk25 (ENSMAUG00000009418)	Farp2 (ENSMAUG00000013770)	ENSMAUG00000011950
Chinese hamster chok1gshd	MODERN SPECIES	1	Fer (ENSCGRG00001004390)	Fbxl17 (ENSCGRG00001011618)	Efna5 (ENSCGRG00001003426) #7	ENSCGRG00001006211	ENSCGRG00001011066	Nudt12 (ENSCGRG00001006711) #12	ENSCGRG00001003228 #13	Macir (ENSCGRG00001009855) #14	Ppip5k2 (ENSCGRG00001002274) #15	Gin1 (ENSCGRG00001004458) #16	Pam (ENSCGRG00001011006) #17	ENSCGRG00001010780	Slco4c1 (ENSCGRG00001010874) #19	ENSCGRG00001003799	ENSCGRG00001004644	St8sia4 (ENSCGRG00001004612) #22	ENSCGRG00001010345	Fam174a (ENSCGRG00001002695) #23	Pdcd1 (ENSCGRG00001002477)	Neu4 (ENSCGRG00001009931)	ENSCGRG00001000728	D2hgdh (ENSCGRG00001002513)	Ing5 (ENSCGRG00001004863)	Dtymk (ENSCGRG00001000666)	Atg4b (ENSCGRG00001001760)	ENSCGRG00001006751	Thap4 (ENSCGRG00001002632)	Bok (ENSCGRG00001024808)	Stk25 (ENSCGRG00001005671)	Farp2 (ENSCGRG00001003923)	ENSCGRG00001009996
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000154799	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d.a #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059.z
Prairie vole	MODERN SPECIES	354	ENSMOCG00000011127	Efna5 (ENSMOCG00000018750) #7	ENSMOCG00000005450	ENSMOCG00000007368	Nudt12 (ENSMOCG00000005692) #12	ENSMOCG00000015936 #13	Macir (ENSMOCG00000018727) #14	Ppip5k2 (ENSMOCG00000020966) #15	Gin1 (ENSMOCG00000021884) #16	Pam (ENSMOCG00000012283) #17	ENSMOCG00000006301	ENSMOCG00000018358	Slco4c1 (ENSMOCG00000004368) #19	ENSMOCG00000006288	ENSMOCG00000009291	St8sia4 (ENSMOCG00000013060) #22	Fam174a (ENSMOCG00000015018) #23	ENSMOCG00000003363	Pdcd1 (ENSMOCG00000014895)	Neu4 (ENSMOCG00000016739)	ENSMOCG00000007726	D2hgdh (ENSMOCG00000020154)	Ing5 (ENSMOCG00000014178)	ENSMOCG00000005204	Dtymk (ENSMOCG00000006228)	Atg4b (ENSMOCG00000013012)	ENSMOCG00000014492	Bok (ENSMOCG00000016270)	Stk25 (ENSMOCG00000017547)	Farp2 (ENSMOCG00000021782)	ENSMOCG00000014906
Northern American deer mouse	MODERN SPECIES	4	Lrrc30 (ENSPEMG00000003079)	Ptprm (ENSPEMG00000024155)	Themis3 (ENSPEMG00000021070)	Rab12 (ENSPEMG00000021032)	Mtcl1 (ENSPEMG00000021910)	Nudt12 (ENSPEMG00000020321) #12	Pdzph1 (ENSPEMG00000024409) #13	Macir (ENSPEMG00000027934) #14	Ppip5k2 (ENSPEMG00000010567) #15	Gin1 (ENSPEMG00000028100) #16	Pam (ENSPEMG00000008719) #17	ENSPEMG00000014680	ENSPEMG00000017201 #18	ENSPEMG00000030212 #18	Slco4c1 (ENSPEMG00000020395) #19	St8sia4 (ENSPEMG00000025143) #22	Fam174a (ENSPEMG00000023963) #23	ENSPEMG00000013367	ENSPEMG00000001999	ENSPEMG00000028919	Pdcd1 (ENSPEMG00000010110)	Neu4 (ENSPEMG00000022695)	ENSPEMG00000013727	D2hgdh (ENSPEMG00000021435)	Ing5 (ENSPEMG00000021508)	Dtymk (ENSPEMG00000023813)	Atg4b (ENSPEMG00000023843)	ENSPEMG00000002288	Thap4 (ENSPEMG00000022638)	Bok (ENSPEMG00000023399)	Stk25 (ENSPEMG00000023590)
Murinae	ANCESTRAL SPECIES	9	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d.b.a #18	ENSGT01080000257410.D.d.b.b #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059.z
Mus	ANCESTRAL SPECIES	5	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a	ENSGT00940000161211	ENSGT00390000004385	ENSGT00390000017600	ENSGT00730000111317	ENSGT00940000158167	ENSGT01080000257410.D.d.b.a #18	ENSGT00940000156369 #17	ENSGT00940000160670 #16	ENSGT00390000009048.a.b #15	ENSGT00390000005782 #14	ENSGT01080000257410.D.d.b.b #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059.z
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a	ENSGT00940000161211	ENSGT00390000004385	ENSGT00390000017600	ENSGT00730000111317	ENSGT00940000158167	ENSGT00940000164023.c.b	ENSGT01080000257410.D.d.b.a #18	ENSGT00940000156369 #17	ENSGT00940000160670 #16	ENSGT00390000009048.a.b #15	ENSGT00390000005782 #14	ENSGT01080000257410.D.d.b.b #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059.z
Ryukyu mouse	MODERN SPECIES		Phlpp1 (MGP_CAROLIEiJ_G0014487)	Zcchc2 (MGP_CAROLIEiJ_G0014486)	Tnfrsf11a (MGP_CAROLIEiJ_G0014485)	Relch (MGP_CAROLIEiJ_G0014484)	Pign (MGP_CAROLIEiJ_G0014483)	Rnf152 (MGP_CAROLIEiJ_G0014482)	Cdh20 (MGP_CAROLIEiJ_G0014481)	Cntnap5b (MGP_CAROLIEiJ_G0014480)	MGP_CAROLIEiJ_G0014479 #18	Pam (MGP_CAROLIEiJ_G0014478) #17	Gin1 (MGP_CAROLIEiJ_G0014477) #16	Ppip5k2 (MGP_CAROLIEiJ_G0014476) #15	Macir (MGP_CAROLIEiJ_G0014475) #14	Slco6c1 (MGP_CAROLIEiJ_G0014474) #18	Slco4c1 (MGP_CAROLIEiJ_G0014473) #19	St8sia4 (MGP_CAROLIEiJ_G0014472) #22	Fam174a (MGP_CAROLIEiJ_G0014471) #23	Pdcd1 (MGP_CAROLIEiJ_G0014470)	Neu4 (MGP_CAROLIEiJ_G0014469)	MGP_CAROLIEiJ_G0014468	MGP_CAROLIEiJ_G0014467	MGP_CAROLIEiJ_G0014466	D2hgdh (MGP_CAROLIEiJ_G0014465)	Ing5 (MGP_CAROLIEiJ_G0014464)	Dtymk (MGP_CAROLIEiJ_G0014463)	Atg4b (MGP_CAROLIEiJ_G0014462)	Thap4 (MGP_CAROLIEiJ_G0014461)	Bok (MGP_CAROLIEiJ_G0014460)	Stk25 (MGP_CAROLIEiJ_G0014459)	Farp2 (MGP_CAROLIEiJ_G0014458)	MGP_CAROLIEiJ_G0014457
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a	ENSGT00940000161211	ENSGT00390000004385	ENSGT00390000017600	ENSGT00730000111317	ENSGT00940000158167	ENSGT00940000164023.c.b	ENSGT01080000257410.D.d.b.a #18	ENSGT00940000156369 #17	ENSGT00940000160670 #16	ENSGT00390000009048.a.b #15	ENSGT00390000005782 #14	ENSGT01080000257410.D.d.b.b #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a.bb	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059.z
Mouse	MODERN SPECIES		Phlpp1 (ENSMUSG00000044340)	Zcchc2 (ENSMUSG00000038866)	Tnfrsf11a (ENSMUSG00000026321)	Relch (ENSMUSG00000026319)	Pign (ENSMUSG00000056536)	Rnf152 (ENSMUSG00000047496)	Cdh20 (ENSMUSG00000050840)	Cntnap5b (ENSMUSG00000067028)	Slco6d1 (ENSMUSG00000026336) #18	Pam (ENSMUSG00000026335) #17	Gin1 (ENSMUSG00000026333) #16	Ppip5k2 (ENSMUSG00000040648) #15	Macir (ENSMUSG00000044768) #14	Slco6c1 (ENSMUSG00000026331) #18	Slco4c1 (ENSMUSG00000040693) #19	St8sia4 (ENSMUSG00000040710) #22	Fam174a (ENSMUSG00000051185) #23	Pdcd1 (ENSMUSG00000026285)	Neu4 (ENSMUSG00000034000)	Gal3st2c (ENSMUSG00000073608)	Gal3st2b (ENSMUSG00000093805)	Gal3st2 (ENSMUSG00000094651)	D2hgdh (ENSMUSG00000073609)	Ing5 (ENSMUSG00000026283)	Dtymk (ENSMUSG00000026281)	Atg4b (ENSMUSG00000026280)	Thap4 (ENSMUSG00000026279)	Bok (ENSMUSG00000026278)	Stk25 (ENSMUSG00000026277)	Farp2 (ENSMUSG00000034066)	Septin2 (ENSMUSG00000116048)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a	ENSGT00940000161211	ENSGT00390000004385	ENSGT00390000017600	ENSGT00730000111317	ENSGT00940000158167	ENSGT00940000164023.c.b	ENSGT01080000257410.D.d.b.a #18	ENSGT00940000156369 #17	ENSGT00940000160670 #16	ENSGT00390000009048.a.b #15	ENSGT00390000005782 #14	ENSGT01080000257410.D.d.b.b #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a.bb	ENSGT01050000247607	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00900000143170	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098
Steppe mouse	MODERN SPECIES	3185															Slco4c1 (ENSMSIG00000019329) #19	ENSMSIG00000019320 #22	Fam174a (ENSMSIG00000019305) #23	Pdcd1 (ENSMSIG00000019277)	Neu4 (ENSMSIG00000019256)	ENSMSIG00000019220
spretus	MODERN SPECIES		Phlpp1 (MGP_SPRETEiJ_G0015291)	Zcchc2 (MGP_SPRETEiJ_G0015290)	Tnfrsf11a (MGP_SPRETEiJ_G0015289)	Relch (MGP_SPRETEiJ_G0015288)	Pign (MGP_SPRETEiJ_G0015287)	Rnf152 (MGP_SPRETEiJ_G0015286)	Cdh20 (MGP_SPRETEiJ_G0015285)	Cntnap5b (MGP_SPRETEiJ_G0015284)	MGP_SPRETEiJ_G0015283 #18	Pam (MGP_SPRETEiJ_G0015282) #17	Gin1 (MGP_SPRETEiJ_G0015281) #16	Ppip5k2 (MGP_SPRETEiJ_G0015280) #15	Macir (MGP_SPRETEiJ_G0015279) #14	MGP_SPRETEiJ_G0015278 #18	Slco4c1 (MGP_SPRETEiJ_G0015277) #19	St8sia4 (MGP_SPRETEiJ_G0015276) #22	Fam174a (MGP_SPRETEiJ_G0015275) #23	Pdcd1 (MGP_SPRETEiJ_G0015274)	Neu4 (MGP_SPRETEiJ_G0015273)	MGP_SPRETEiJ_G0015272	MGP_SPRETEiJ_G0015271	MGP_SPRETEiJ_G0015270	D2hgdh (MGP_SPRETEiJ_G0015269)	Ing5 (MGP_SPRETEiJ_G0015268)	Dtymk (MGP_SPRETEiJ_G0015267)	Atg4b (MGP_SPRETEiJ_G0015266)	Thap4 (MGP_SPRETEiJ_G0015265)	Bok (MGP_SPRETEiJ_G0015264)	Stk25 (MGP_SPRETEiJ_G0015263)	Farp2 (MGP_SPRETEiJ_G0015262)	MGP_SPRETEiJ_G0015261
Shrew mouse	MODERN SPECIES	18	Kdsr (MGP_PahariEiJ_G0027723)	Bcl2 (MGP_PahariEiJ_G0027722)	Phlpp1 (MGP_PahariEiJ_G0027721)	Zcchc2 (MGP_PahariEiJ_G0027720)	Tnfrsf11a (MGP_PahariEiJ_G0027719)	Relch (MGP_PahariEiJ_G0027718)	Pign (MGP_PahariEiJ_G0027717)	Rnf152 (MGP_PahariEiJ_G0027716)	Cdh20 (MGP_PahariEiJ_G0027715)	Pam (MGP_PahariEiJ_G0027714) #17	Gin1 (MGP_PahariEiJ_G0027713) #16	Ppip5k2 (MGP_PahariEiJ_G0027712) #15	Macir (MGP_PahariEiJ_G0027711) #14	MGP_PahariEiJ_G0027710 #18	Slco4c1 (MGP_PahariEiJ_G0027709) #19	St8sia4 (MGP_PahariEiJ_G0027708) #22	Fam174a (MGP_PahariEiJ_G0027707) #23	Pdcd1 (MGP_PahariEiJ_G0027706)	Neu4 (MGP_PahariEiJ_G0027705)	MGP_PahariEiJ_G0027704	MGP_PahariEiJ_G0027703	MGP_PahariEiJ_G0027702	D2hgdh (MGP_PahariEiJ_G0027701)	Ing5 (MGP_PahariEiJ_G0027700)	Dtymk (MGP_PahariEiJ_G0027699)	Atg4b (MGP_PahariEiJ_G0027698)	Thap4 (MGP_PahariEiJ_G0027697)	Bok (MGP_PahariEiJ_G0027696)	Stk25 (MGP_PahariEiJ_G0027695)	Farp2 (MGP_PahariEiJ_G0027694)	MGP_PahariEiJ_G0027693
Rat	MODERN SPECIES	19	Fer (ENSRNOG00000015898)	Fbxl17 (ENSRNOG00000013875)	Efna5 (ENSRNOG00000034177) #7	AABR07068536.1 (ENSRNOG00000032765)	Nudt12 (ENSRNOG00000022576) #12	Pdzph1 (ENSRNOG00000011042) #13	Macir (ENSRNOG00000032398) #14	Ppip5k2 (ENSRNOG00000011613) #15	Gin1 (ENSRNOG00000011962) #16	Pam (ENSRNOG00000033280) #17	Slco6d1 (ENSRNOG00000031146) #18	Slco6c1 (ENSRNOG00000013792) #18	AABR07068417.1 (ENSRNOG00000025797)	Slco6b1 (ENSRNOG00000019252) #18	Slco4c1 (ENSRNOG00000022711) #19	St8sia4 (ENSRNOG00000019128) #22	ENSRNOG00000062997	Fam174a (ENSRNOG00000019087) #23	Chchd2l3 (ENSRNOG00000051180)	Pdcd1 (ENSRNOG00000019043)	Neu4 (ENSRNOG00000019031)	Gal3st2c (ENSRNOG00000070509)	D2hgdh (ENSRNOG00000019012)	Ing5 (ENSRNOG00000018988)	Dtymk (ENSRNOG00000018904)	Atg4b (ENSRNOG00000018403)	AC109427.1 (ENSRNOG00000056259)	Thap4 (ENSRNOG00000018351)	Bok (ENSRNOG00000018214)	Stk25 (ENSRNOG00000018181)	Farp2 (ENSRNOG00000018051)
Upper Galilee mountains blind mole rat	MODERN SPECIES	892																St8sia4 (ENSNGAG00000000071) #22	Fam174a (ENSNGAG00000020422) #23	ENSNGAG00000018256	Chd1 (ENSNGAG00000011536) #25	Rgmb (ENSNGAG00000009414) #27
Lesser Egyptian jerboa	MODERN SPECIES	48	ENSJJAG00000005156	ENSJJAG00000023673	ENSJJAG00000018192	Efna5 (ENSJJAG00000023060) #7	ENSJJAG00000015185	ENSJJAG00000012343	Nudt12 (ENSJJAG00000011093) #12	ENSJJAG00000006056 #13	Macir (ENSJJAG00000005247) #14	Ppip5k2 (ENSJJAG00000017958) #15	Gin1 (ENSJJAG00000016179) #16	Pam (ENSJJAG00000021189) #17	Slco4c1 (ENSJJAG00000007136) #19	ENSJJAG00000018360	ENSJJAG00000021270	St8sia4 (ENSJJAG00000011173) #22	Fam174a (ENSJJAG00000010590) #23	ENSJJAG00000000828	ENSJJAG00000010041	ENSJJAG00000020605	Chd1 (ENSJJAG00000010572) #25	ENSJJAG00000018381 #27	ENSJJAG00000012290	Ccdc152 (ENSJJAG00000020346)	Ghr (ENSJJAG00000018825)	Fbxo4 (ENSJJAG00000021644)	ENSJJAG00000021693	ENSJJAG00000004330	Plcxd3 (ENSJJAG00000023898)	ENSJJAG00000020132	C6 (ENSJJAG00000008024)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Hystricomorpha	ANCESTRAL SPECIES	27	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385.b #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Hystricomorpha_a	ANCESTRAL SPECIES	24	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385.b #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Guinea pig	MODERN SPECIES	1	ENSCPOG00000001404	ENSCPOG00000020556	ENSCPOG00000009632	OR2G3 (ENSCPOG00000025278)	OR14L1P (ENSCPOG00000000113)	ENSCPOG00000039238	ENSCPOG00000000112	OR9H1P (ENSCPOG00000037418)	ENSCPOG00000012526	ENSCPOG00000023419	ENSCPOG00000020878	ENSCPOG00000019449	ENSCPOG00000008438	ENSCPOG00000000666	ENSCPOG00000026294	ST8SIA4 (ENSCPOG00000037099) #22	FAM174A (ENSCPOG00000021760) #23	CHD1 (ENSCPOG00000003318) #25	RGMB (ENSCPOG00000023317) #27	RIOK2 (ENSCPOG00000010551) #28	LIX1 (ENSCPOG00000033018) #29	LNPEP (ENSCPOG00000013399) #30	ERAP1 (ENSCPOG00000013375) #31	ENSCPOG00000006529 #32	PCSK1 (ENSCPOG00000010245) #33	ELL2 (ENSCPOG00000038906) #34	GLRX (ENSCPOG00000040776) #35	RHOBTB3 (ENSCPOG00000003618) #36	SPATA9 (ENSCPOG00000003616) #37	RFESD (ENSCPOG00000036013)	ENSCPOG00000021967
Hystricomorpha_b	ANCESTRAL SPECIES	50	ENSGT00390000015874.i	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385.b #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Degu	MODERN SPECIES	50	ENSODEG00000013610	ENSODEG00000012423	ENSODEG00000014212	EFNA5 (ENSODEG00000013673) #7	ENSODEG00000019972	ENSODEG00000020022	ENSODEG00000012978	NUDT12 (ENSODEG00000012673) #12	ENSODEG00000013039 #13	MACIR (ENSODEG00000013882) #14	PPIP5K2 (ENSODEG00000012976) #15	GIN1 (ENSODEG00000014540) #16	PAM (ENSODEG00000014808) #17	ENSODEG00000020256	ENSODEG00000012701	ST8SIA4 (ENSODEG00000012997) #22	ENSODEG00000014055	CHD1 (ENSODEG00000013090) #25	RGMB (ENSODEG00000013893) #27	ENSODEG00000013445	ENSODEG00000012940	ENSODEG00000012676	ENSODEG00000020047	LIX1 (ENSODEG00000014038) #29	LNPEP (ENSODEG00000014263) #30	ERAP1 (ENSODEG00000013297) #31	PCSK1 (ENSODEG00000013059) #33	ELL2 (ENSODEG00000013813) #34	GLRX (ENSODEG00000013777) #35	ENSODEG00000013541	RFESD (ENSODEG00000015425)
Long-tailed chinchilla	MODERN SPECIES	125	TMEM232 (ENSCLAG00000005961)	MAN2A1 (ENSCLAG00000006117)	PJA2 (ENSCLAG00000006412)	FER (ENSCLAG00000006598)	ENSCLAG00000006745	EFNA5 (ENSCLAG00000006843) #7	NUDT12 (ENSCLAG00000007434) #12	ENSCLAG00000007540 #13	MACIR (ENSCLAG00000013141) #14	PPIP5K2 (ENSCLAG00000013304) #15	GIN1 (ENSCLAG00000014562) #16	PAM (ENSCLAG00000014740) #17	SLCO6A1 (ENSCLAG00000015414) #18	SLCO4C1 (ENSCLAG00000013462) #19	ENSCLAG00000013603	ST8SIA4 (ENSCLAG00000013701) #22	FAM174A (ENSCLAG00000017337) #23	CHD1 (ENSCLAG00000008757) #25	RGMB (ENSCLAG00000006712) #27	RIOK2 (ENSCLAG00000006790) #28	LIX1 (ENSCLAG00000006870) #29	LNPEP (ENSCLAG00000006957) #30	ERAP1 (ENSCLAG00000007060) #31	CAST (ENSCLAG00000007150) #32	PCSK1 (ENSCLAG00000007253) #33	ELL2 (ENSCLAG00000007343) #34	GLRX (ENSCLAG00000007437) #35	ENSCLAG00000007537	ENSCLAG00000004291 #36	SPATA9 (ENSCLAG00000004337) #37	RFESD (ENSCLAG00000004385)
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000042145	NUDT12 (ENSHGLG00000040400) #12	ENSHGLG00000037789	ENSHGLG00000047321	MACIR (ENSHGLG00000042256) #14	PPIP5K2 (ENSHGLG00000004969) #15	GIN1 (ENSHGLG00000010398) #16	PAM (ENSHGLG00000006916) #17	ENSHGLG00000021081	ENSHGLG00000035670	SLCO6A1 (ENSHGLG00000004826) #18	SLCO4C1 (ENSHGLG00000008917) #19	ENSHGLG00000032541	ENSHGLG00000041123	ENSHGLG00000050019	ST8SIA4 (ENSHGLG00000011228) #22	FAM174A (ENSHGLG00000011072) #23	ENSHGLG00000036534	ENSHGLG00000017912 #25	ENSHGLG00000032614	ENSHGLG00000012961 #27	ENSHGLG00000040252 #26	ENSHGLG00000034828 #27	ENSHGLG00000012366	ENSHGLG00000045948	ENSHGLG00000047744	ENSHGLG00000042454	ENSHGLG00000034078	ENSHGLG00000009139 #28	LIX1 (ENSHGLG00000009013) #29	LNPEP (ENSHGLG00000014656) #30
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Marmotini	ANCESTRAL SPECIES	23	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00940000160132.f	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Alpin marmot	MODERN SPECIES		ENSMMMG00000008614	PJA2 (ENSMMMG00000008527)	FER (ENSMMMG00000008367)	ENSMMMG00000008309	EFNA5 (ENSMMMG00000008246) #7	ENSMMMG00000008229	NUDT12 (ENSMMMG00000008194) #12	ENSMMMG00000008182 #13	MACIR (ENSMMMG00000008109) #14	PPIP5K2 (ENSMMMG00000008005) #15	GIN1 (ENSMMMG00000007965) #16	PAM (ENSMMMG00000007816) #17	ENSMMMG00000007805 ##8	ENSMMMG00000007789 #18	SLCO4C1 (ENSMMMG00000007769) #19	ST8SIA4 (ENSMMMG00000007750) #22	ENSMMMG00000007722	CHD1 (ENSMMMG00000007643) #25	ENSMMMG00000007613 #27	ENSMMMG00000007586	ENSMMMG00000007554	RIOK2 (ENSMMMG00000007539) #28	LIX1 (ENSMMMG00000007525) #29	LNPEP (ENSMMMG00000007455) #30	ERAP2 (ENSMMMG00000006028)	ERAP1 (ENSMMMG00000005931) #31	CAST (ENSMMMG00000005793) #32	PCSK1 (ENSMMMG00000005758) #33	ENSMMMG00000005740	ELL2 (ENSMMMG00000005714) #34	ENSMMMG00000005706
Marmotini_b	ANCESTRAL SPECIES	89						ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000017780.f.a.a	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT00390000012691.c.b.o.a.a	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00940000160132.f	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Arctic ground squirrel	MODERN SPECIES	149				ENSUPAG00010023147	NUDT12 (ENSUPAG00010023146) #12	ENSUPAG00010023145 #13	ENSUPAG00010023144	MACIR (ENSUPAG00010023143) #14	ENSUPAG00010023140	PPIP5K2 (ENSUPAG00010023117) #15	GIN1 (ENSUPAG00010023109) #16	PAM (ENSUPAG00010023102) #17	ENSUPAG00010023096	ENSUPAG00010023093 #18	SLCO4C1 (ENSUPAG00010023086) #19	ST8SIA4 (ENSUPAG00010023082) #22
Squirrel	MODERN SPECIES	123					NUDT12 (ENSSTOG00000025969) #12	ENSSTOG00000028345 #13	ENSSTOG00000020213	MACIR (ENSSTOG00000005686) #14	PPIP5K2 (ENSSTOG00000023063) #15	ENSSTOG00000032465	GIN1 (ENSSTOG00000014134) #16	PAM (ENSSTOG00000006908) #17	ENSSTOG00000019434	SLCO4C1 (ENSSTOG00000014718) #19	ENSSTOG00000020026	ST8SIA4 (ENSSTOG00000000036) #22	FAM174A (ENSSTOG00000027034) #23	ENSSTOG00000025092	CHD1 (ENSSTOG00000004336) #25	RGMB (ENSSTOG00000004318) #27	ENSSTOG00000032014	ENSSTOG00000033596	RIOK2 (ENSSTOG00000006659) #28	LIX1 (ENSSTOG00000021232) #29	LNPEP (ENSSTOG00000006607) #30	ERAP2 (ENSSTOG00000015281)	ERAP1 (ENSSTOG00000015275) #31	ENSSTOG00000032524	CAST (ENSSTOG00000015263) #32	PCSK1 (ENSSTOG00000010450) #33	ELL2 (ENSSTOG00000023576) #34
Eurasian red squirrel	MODERN SPECIES	15	ENSSVLG00005018062	ENSSVLG00005018113	EFNA5 (ENSSVLG00005018169) #7	ENSSVLG00005018299	NUDT12 (ENSSVLG00005018321) #12	ENSSVLG00005018413 #13	MACIR (ENSSVLG00005018538) #14	PPIP5K2 (ENSSVLG00005018573) #15	GIN1 (ENSSVLG00005018669) #16	PAM (ENSSVLG00005018769) #17	ENSSVLG00005018917	SLCO6A1 (ENSSVLG00005018983) #18	SLCO4C1 (ENSSVLG00005019314) #19	ENSSVLG00005019382	ENSSVLG00005019429	ST8SIA4 (ENSSVLG00005019513) #22	FAM174A (ENSSVLG00005019569) #23	CHD1 (ENSSVLG00005019683) #25	ENSSVLG00005019771	RGMB (ENSSVLG00005019822) #27	ENSSVLG00005019866	ENSSVLG00005019957	ENSSVLG00005019998	ENSSVLG00005020078	ENSSVLG00005020118	RIOK2 (ENSSVLG00005020164) #28	LIX1 (ENSSVLG00005020192) #29	LNPEP (ENSSVLG00005004250) #30	ERAP2 (ENSSVLG00005004319)	ENSSVLG00005004370	ERAP1 (ENSSVLG00005004542) #31
Tree shrew	MODERN SPECIES	517																ST8SIA4 (ENSTBEG00000008758) #22
Primates	ANCESTRAL SPECIES	8	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Bushbaby	MODERN SPECIES	145	MAN2A1 (ENSOGAG00000015667)	PJA2 (ENSOGAG00000015661)	FER (ENSOGAG00000015656)	FBXL17 (ENSOGAG00000007976)	EFNA5 (ENSOGAG00000002444) #7	ENSOGAG00000033553	ENSOGAG00000032126	NUDT12 (ENSOGAG00000006504) #12	ENSOGAG00000028282 #13	MACIR (ENSOGAG00000008278) #14	PPIP5K2 (ENSOGAG00000008268) #15	GIN1 (ENSOGAG00000008147) #16	PAM (ENSOGAG00000008140) #17	ENSOGAG00000010553 #18	SLCO4C1 (ENSOGAG00000010550) #19	ST8SIA4 (ENSOGAG00000004541) #22	ENSOGAG00000030528 #23	CHD1 (ENSOGAG00000016061) #25	RGMB (ENSOGAG00000024074) #27	RIOK2 (ENSOGAG00000008467) #28	LIX1 (ENSOGAG00000008462) #29	LNPEP (ENSOGAG00000003576) #30
Lemuriformes	ANCESTRAL SPECIES	65								ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993.m #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Mouse lemur	MODERN SPECIES	3	TMEM167A (ENSMICG00000009860)	XRCC4 (ENSMICG00000031093)	VCAN (ENSMICG00000035948)	HAPLN1 (ENSMICG00000034468)	EDIL3 (ENSMICG00000014682)	COX7C (ENSMICG00000007888)	ENSMICG00000043126	NUDT12 (ENSMICG00000036782) #12	ENSMICG00000036226 #13	MACIR (ENSMICG00000047126) #14	PPIP5K2 (ENSMICG00000004779) #15	GIN1 (ENSMICG00000029753) #16	PAM (ENSMICG00000004763) #17	SLCO6A1 (ENSMICG00000000142) #18	SLCO4C1 (ENSMICG00000013545) #19	ST8SIA4 (ENSMICG00000048096) #22	FAM174A (ENSMICG00000012302) #23	CHD1 (ENSMICG00000003914) #25	RGMB (ENSMICG00000046794) #27	RIOK2 (ENSMICG00000037437) #28	LIX1 (ENSMICG00000032003) #29	LNPEP (ENSMICG00000046342) #30	ERAP2 (ENSMICG00000017413)	ERAP1 (ENSMICG00000017410) #31	CAST (ENSMICG00000017406) #32	PCSK1 (ENSMICG00000010208) #33	ENSMICG00000007501 #34	GLRX (ENSMICG00000038101) #35	RHOBTB3 (ENSMICG00000001386) #36	SPATA9 (ENSMICG00000044517) #37	RFESD (ENSMICG00000006732)
Lemuriformes_a	ANCESTRAL SPECIES	351																ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23
Greater bamboo lemur	MODERN SPECIES	726																ST8SIA4 (ENSPSMG00000000687) #22	ENSPSMG00000000691	FAM174A (ENSPSMG00000000699) #23
Coquerels sifaka	MODERN SPECIES	617																ST8SIA4 (ENSPCOG00000013591) #22	FAM174A (ENSPCOG00000014405) #23
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Tarsier	MODERN SPECIES	5333															ENSTSYG00000027154	ST8SIA4 (ENSTSYG00000001695) #22
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00940000168742	ENSGT00900000141068.m.a #35	ENSGT00850000132411 #36
Catarrhini	ANCESTRAL SPECIES	7	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00390000003629	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828.k #34	ENSGT00940000168742	ENSGT00900000141068.m.a #35	ENSGT00850000132411 #36
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00910000147408	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00390000003629	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00910000147547	ENSGT00940000154828.k #34	ENSGT00900000141068.m.a.a #35	ENSGT00850000132411 #36
Hominidae	ANCESTRAL SPECIES	7	ENSGT00910000147408	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00390000003629	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00910000147547	ENSGT00940000154828.k #34	ENSGT00900000141068.m.a.a #35	ENSGT00850000132411 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00910000147408	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00390000003629	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00950000183098.b.a.b.ib.b.a	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000154891.g.a.b.b	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00910000147547	ENSGT00940000154828.k.a #34
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00910000147408	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00390000003629	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00950000183098.b.a.b.ib.b.a	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000154891.g.a.b.b	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828.k.a #34	ENSGT00900000141068.m.a.a #35
Pan	ANCESTRAL SPECIES	21							ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00390000003629	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00910000148718	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00950000183098.b.a.b.ib.b.a	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000154891.g.a.b.b	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157512	ENSGT00940000154187.a.b
Chimpanzee	MODERN SPECIES	18	FER (ENSPTRG00000017117)	ENSPTRG00000052594	FBXL17 (ENSPTRG00000017116)	ENSPTRG00000051006	EFNA5 (ENSPTRG00000017115) #7	ENSPTRG00000043710	ENSPTRG00000034210 ##11	NUDT12 (ENSPTRG00000017114) #12	MACIR (ENSPTRG00000045376) #14	PPIP5K2 (ENSPTRG00000017112) #15	GIN1 (ENSPTRG00000030296) #16	PAM (ENSPTRG00000017110) #17	SLCO6A1 (ENSPTRG00000028663) #18	ENSPTRG00000050297	SLCO4C1 (ENSPTRG00000017107) #19	ST8SIA4 (ENSPTRG00000042921) #22	FAM174A (ENSPTRG00000017105) #23	ENSPTRG00000044211	CHD1 (ENSPTRG00000017103) #25	ENSPTRG00000049158 #26	RGMB (ENSPTRG00000017102) #27	ENSPTRG00000038674	RIOK2 (ENSPTRG00000017100) #28	LIX1 (ENSPTRG00000017099) #29	ENSPTRG00000051111	LNPEP (ENSPTRG00000017097) #30	ERAP2 (ENSPTRG00000017096)	ERAP1 (ENSPTRG00000017095) #31	CAST (ENSPTRG00000017093) #32	CDH18 (ENSPTRG00000016752)	ENSPTRG00000052439
Bonobo	MODERN SPECIES	18	FER (ENSPPAG00000039597)	ENSPPAG00000035591	ENSPPAG00000028652	ENSPPAG00000029397	EFNA5 (ENSPPAG00000014646) #7	ENSPPAG00000030911	NUDT12 (ENSPPAG00000036756) #12	MACIR (ENSPPAG00000021533) #14	PPIP5K2 (ENSPPAG00000027206) #15	GIN1 (ENSPPAG00000034818) #16	ENSPPAG00000034972	PAM (ENSPPAG00000029053) #17	SLCO6A1 (ENSPPAG00000026067) #18	SLCO4C1 (ENSPPAG00000043922) #19	ENSPPAG00000024337	ST8SIA4 (ENSPPAG00000033695) #22	FAM174A (ENSPPAG00000021592) #23	ENSPPAG00000032660	CHD1 (ENSPPAG00000043367) #25	ENSPPAG00000022165 #26	RGMB (ENSPPAG00000018256) #27	ENSPPAG00000004814	RIOK2 (ENSPPAG00000027414) #28	LIX1 (ENSPPAG00000034876) #29	ENSPPAG00000038213	LNPEP (ENSPPAG00000038572) #30	ERAP2 (ENSPPAG00000029772)	ERAP1 (ENSPPAG00000029856) #31	CAST (ENSPPAG00000042445) #32	CDH18 (ENSPPAG00000040456)	CDH12 (ENSPPAG00000029060)
Human	MODERN SPECIES	17	TSLP (ENSG00000145777)	SLC25A46 (ENSG00000164209)	TMEM232 (ENSG00000186952)	MAN2A1 (ENSG00000112893)	PJA2 (ENSG00000198961)	FER (ENSG00000151422)	FBXL17 (ENSG00000145743)	EFNA5 (ENSG00000184349) #7	NUDT12 (ENSG00000112874) #12	MACIR (ENSG00000181751) #14	PPIP5K2 (ENSG00000145725) #15	GIN1 (ENSG00000145723) #16	PAM (ENSG00000145730) #17	SLCO6A1 (ENSG00000205359) #18	SLCO4C1 (ENSG00000173930) #19	ST8SIA4 (ENSG00000113532) #22	FAM174A (ENSG00000174132) #23	CHD1 (ENSG00000153922) #25	RGMB (ENSG00000174136) #27	RIOK2 (ENSG00000058729) #28	LIX1 (ENSG00000145721) #29	LNPEP (ENSG00000113441) #30	ERAP2 (ENSG00000164308)	ERAP1 (ENSG00000164307) #31	CAST (ENSG00000153113) #32	PCSK1 (ENSG00000175426) #33	ELL2 (ENSG00000118985) #34	GLRX (ENSG00000173221) #35	RHOBTB3 (ENSG00000164292) #36	SPATA9 (ENSG00000145757) #37	RFESD (ENSG00000175449)
Gorilla	MODERN SPECIES	18	ENSGGOG00000010526	FER (ENSGGOG00000010028)	FBXL17 (ENSGGOG00000015039)	ENSGGOG00000042159	EFNA5 (ENSGGOG00000000371) #7	ENSGGOG00000027503	NUDT12 (ENSGGOG00000023955) #12	MACIR (ENSGGOG00000040406) #14	PPIP5K2 (ENSGGOG00000012250) #15	GIN1 (ENSGGOG00000023118) #16	EIF3K (ENSGGOG00000027517)	PAM (ENSGGOG00000009306) #17	SLCO6A1 (ENSGGOG00000014715) #18	ENSGGOG00000027219	SLCO4C1 (ENSGGOG00000023256) #19	ST8SIA4 (ENSGGOG00000011260) #22	FAM174A (ENSGGOG00000022218) #23	ENSGGOG00000044210	CHD1 (ENSGGOG00000011463) #25	ENSGGOG00000023438 #26	RGMB (ENSGGOG00000011296) #27	ENSGGOG00000022927	RIOK2 (ENSGGOG00000022136) #28	LIX1 (ENSGGOG00000012515) #29	ENSGGOG00000027714	LNPEP (ENSGGOG00000002482) #30	ERAP2 (ENSGGOG00000012203)	ERAP1 (ENSGGOG00000009305) #31	CAST (ENSGGOG00000009283) #32	PCSK1 (ENSGGOG00000006986) #33	ENSGGOG00000040980
Orangutan	MODERN SPECIES	18	TMEM232 (ENSPPYG00000015676)	MAN2A1 (ENSPPYG00000015675)	PJA2 (ENSPPYG00000015673)	ENSPPYG00000032324	FER (ENSPPYG00000015672)	FBXL17 (ENSPPYG00000015671)	EFNA5 (ENSPPYG00000015670) #7	NUDT12 (ENSPPYG00000015669) #12	MACIR (ENSPPYG00000015668) #14	PPIP5K2 (ENSPPYG00000015667) #15	GIN1 (ENSPPYG00000015666) #16	PAM (ENSPPYG00000015665) #17	SLCO6A1 (ENSPPYG00000015664) #18	SLCO4C1 (ENSPPYG00000015663) #19	ENSPPYG00000015662	ST8SIA4 (ENSPPYG00000031823) #22	FAM174A (ENSPPYG00000015660) #23	CHD1 (ENSPPYG00000015659) #25	ENSPPYG00000015658 #26	RGMB (ENSPPYG00000015657) #27	ENSPPYG00000031098	ENSPPYG00000015656	RIOK2 (ENSPPYG00000015654) #28	LIX1 (ENSPPYG00000015653) #29	LNPEP (ENSPPYG00000036322) #30	ERAP2 (ENSPPYG00000015651)	ERAP1 (ENSPPYG00000015650) #31	CAST (ENSPPYG00000015649) #32	PCSK1 (ENSPPYG00000015648) #33	ELL2 (ENSPPYG00000015647) #34	GLRX (ENSPPYG00000015645) #35
Gibbon	MODERN SPECIES	11	ENSNLEG00000011340	MAN2A1 (ENSNLEG00000011279)	PJA2 (ENSNLEG00000011252)	ENSNLEG00000033440	FER (ENSNLEG00000011211)	ENSNLEG00000033017	EFNA5 (ENSNLEG00000011201) #7	ENSNLEG00000032142	NUDT12 (ENSNLEG00000011194) #12	MACIR (ENSNLEG00000011188) #14	PPIP5K2 (ENSNLEG00000011109) #15	GIN1 (ENSNLEG00000011091) #16	PAM (ENSNLEG00000010933) #17	SLCO6A1 (ENSNLEG00000010892) #18	SLCO4C1 (ENSNLEG00000010874) #19	ST8SIA4 (ENSNLEG00000035472) #22	FAM174A (ENSNLEG00000030019) #23	CHD1 (ENSNLEG00000014493) #25	ENSNLEG00000019295 #26	RGMB (ENSNLEG00000014489) #27	ENSNLEG00000032874	RIOK2 (ENSNLEG00000014474) #28	LIX1 (ENSNLEG00000014470) #29	LNPEP (ENSNLEG00000014422) #30	ERAP2 (ENSNLEG00000014369)	ERAP1 (ENSNLEG00000014076) #31	CAST (ENSNLEG00000014144) #32	PCSK1 (ENSNLEG00000014070) #33	ENSNLEG00000030311	ENSNLEG00000014192 #34	GLRX (ENSNLEG00000014179) #35
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00390000004322.b.g	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000156053.d	ENSGT00910000148108	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00390000003629	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828.k #34	ENSGT00940000168742	ENSGT00900000141068.m.a #35	ENSGT00850000132411 #36
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000154585.a	ENSGT00390000004322.b.g	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000156053.d	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00390000003629	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828.k #34	ENSGT00940000168742	ENSGT00900000141068.m.a #35	ENSGT00850000132411 #36
Vervet Monkey	MODERN SPECIES	15	ENSCSAG00000015072	MAN2A1 (ENSCSAG00000015101)	PJA2 (ENSCSAG00000015106)	ENSCSAG00000000515	FER (ENSCSAG00000015117)	FBXL17 (ENSCSAG00000015121)	EFNA5 (ENSCSAG00000015123) #7	NUDT12 (ENSCSAG00000015130) #12	MACIR (ENSCSAG00000000516) #14	PPIP5K2 (ENSCSAG00000015149) #15	GIN1 (ENSCSAG00000015159) #16	PAM (ENSCSAG00000015177) #17	SLCO6A1 (ENSCSAG00000015256) #18	SLCO4C1 (ENSCSAG00000015304) #19	ENSCSAG00000000517	ST8SIA4 (ENSCSAG00000015321) #22	FAM174A (ENSCSAG00000015327) #23	CHD1 (ENSCSAG00000015339) #25	RGMB (ENSCSAG00000015350) #27
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000156053.d	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00950000182767.b.b.d.hb.b.a.b.b.a	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828.k #34	ENSGT00900000141068.m.a.c.b #35	ENSGT00940000168742	ENSGT00900000141068.m.a.d #35
Macaca	ANCESTRAL SPECIES	7	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00390000016597.q.b	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00950000182767.b.b.d.hb.b.a.b.b.a	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828.k #34	ENSGT00900000141068.m.a.c.b #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Macaca_a	ANCESTRAL SPECIES	8	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00390000016597.q.b	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.b.a.a.a.a.c.b	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00950000182767.b.b.d.hb.b.a.b.b.a	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00860000135486.A.b.a.b.a.b.b	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.a.a.b.a	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828.k #34	ENSGT00900000141068.m.a.c.b #35	ENSGT00850000132411 #36
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000059504	FER (ENSMFAG00000042431)	ENSMFAG00000057313	FBXL17 (ENSMFAG00000042858)	EFNA5 (ENSMFAG00000000459) #7	ENSMFAG00000055676	NUDT12 (ENSMFAG00000034456) #12	MACIR (ENSMFAG00000030345) #14	PPIP5K2 (ENSMFAG00000031770) #15	GIN1 (ENSMFAG00000033277) #16	PAM (ENSMFAG00000033664) #17	SLCO6A1 (ENSMFAG00000039771) #18	SLCO4C1 (ENSMFAG00000046265) #19	ENSMFAG00000051471	ENSMFAG00000039934	ST8SIA4 (ENSMFAG00000033174) #22	FAM174A (ENSMFAG00000032676) #23	CHD1 (ENSMFAG00000031226) #25	RGMB (ENSMFAG00000002204) #27	ENSMFAG00000040640	ENSMFAG00000053416	ENSMFAG00000052334	ENSMFAG00000056113	ENSMFAG00000052154	ENSMFAG00000006344	ENSMFAG00000003305	ENSMFAG00000049979	ENSMFAG00000051434	RIOK2 (ENSMFAG00000033056) #28	LIX1 (ENSMFAG00000047651) #29	ENSMFAG00000060868
Rhesus	MODERN SPECIES	16	ENSMMUG00000054511	FER (ENSMMUG00000013582)	ENSMMUG00000056597	ENSMMUG00000060331	FBXL17 (ENSMMUG00000013183)	ENSMMUG00000054898	EFNA5 (ENSMMUG00000018398) #7	NUDT12 (ENSMMUG00000017250) #12	MACIR (ENSMMUG00000004211) #14	PPIP5K2 (ENSMMUG00000007787) #15	GIN1 (ENSMMUG00000007786) #16	ENSMMUG00000057827	PAM (ENSMMUG00000007844) #17	SLCO6A1 (ENSMMUG00000029885) #18	SLCO4C1 (ENSMMUG00000007773) #19	ST8SIA4 (ENSMMUG00000013109) #22	FAM174A (ENSMMUG00000054789) #23	CHD1 (ENSMMUG00000014090) #25	RGMB (ENSMMUG00000014086) #27	ENSMMUG00000064015	ENSMMUG00000059177	ENSMMUG00000057913	ENSMMUG00000053533	RIOK2 (ENSMMUG00000000307) #28	LIX1 (ENSMMUG00000059309) #29	LNPEP (ENSMMUG00000018542) #30	ENSMMUG00000065221	ERAP2 (ENSMMUG00000011043)	ERAP1 (ENSMMUG00000002063) #31	CAST (ENSMMUG00000002062) #32	PCSK1 (ENSMMUG00000005134) #33
Pig-tailed macaque	MODERN SPECIES	473	PJA2 (ENSMNEG00000028695)	ENSMNEG00000040973	FER (ENSMNEG00000035450)	ENSMNEG00000034451	FBXL17 (ENSMNEG00000030050)	EFNA5 (ENSMNEG00000028986) #7	NUDT12 (ENSMNEG00000044651) #12	MACIR (ENSMNEG00000038023) #14	PPIP5K2 (ENSMNEG00000044524) #15	GIN1 (ENSMNEG00000034943) #16	ENSMNEG00000018316	PAM (ENSMNEG00000028738) #17	SLCO6A1 (ENSMNEG00000029762) #18	SLCO4C1 (ENSMNEG00000038860) #19	ENSMNEG00000031760	ST8SIA4 (ENSMNEG00000035918) #22	FAM174A (ENSMNEG00000037436) #23	CHD1 (ENSMNEG00000045073) #25	ENSMNEG00000042828 #26	RGMB (ENSMNEG00000032320) #27	ENSMNEG00000031530
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000156053.d	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00950000182767.b.b.d.hb.b.a.b.b.a	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828.k #34	ENSGT00900000141068.m.a.c.b #35	ENSGT00940000168742	ENSGT00900000141068.m.a.d #35
Olive baboon	MODERN SPECIES	15	ENSPANG00000040857	EFNA5 (ENSPANG00000025087) #7	ENSPANG00000039031	ENSPANG00000039777	NUDT12 (ENSPANG00000004266) #12	ENSPANG00000048105	MACIR (ENSPANG00000019388) #14	PPIP5K2 (ENSPANG00000020013) #15	GIN1 (ENSPANG00000007271) #16	PAM (ENSPANG00000010566) #17	ENSPANG00000037767	SLCO6A1 (ENSPANG00000020937) #18	ENSPANG00000004267 #19	ENSPANG00000039461	ENSPANG00000046235	ST8SIA4 (ENSPANG00000013345) #22	ENSPANG00000025088	ENSPANG00000038954	ENSPANG00000048604	ENSPANG00000038888	CHD1 (ENSPANG00000006387) #25	ENSPANG00000047286 #26	RGMB (ENSPANG00000004372) #27	RIOK2 (ENSPANG00000011977) #28	LIX1 (ENSPANG00000002293) #29	LNPEP (ENSPANG00000010943) #30	ERAP2 (ENSPANG00000006471)	ERAP1 (ENSPANG00000004373) #31	CAST (ENSPANG00000016058) #32	PCSK1 (ENSPANG00000017203) #33	ENSPANG00000040631
Cercopithecinae_d	ANCESTRAL SPECIES	151	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000156053.d	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000009409.eb.a	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00950000182767.b.b.d.hb.b.a.b.b.a	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27
Drill	MODERN SPECIES	1427																ST8SIA4 (ENSMLEG00000028529) #22	FAM174A (ENSMLEG00000009608) #23
Sooty mangabey	MODERN SPECIES	499	ENSCATG00000017816	PJA2 (ENSCATG00000039073)	FER (ENSCATG00000041630)	FBXL17 (ENSCATG00000037828)	ENSCATG00000030057	EFNA5 (ENSCATG00000034296) #7	NUDT12 (ENSCATG00000029567) #12	MACIR (ENSCATG00000016827) #14	PPIP5K2 (ENSCATG00000038434) #15	GIN1 (ENSCATG00000038330) #16	PAM (ENSCATG00000013479) #17	ENSCATG00000021679	SLCO6A1 (ENSCATG00000024448) #18	SLCO4C1 (ENSCATG00000029437) #19	ENSCATG00000035176	ST8SIA4 (ENSCATG00000040100) #22	FAM174A (ENSCATG00000029252) #23	CHD1 (ENSCATG00000032035) #25	RGMB (ENSCATG00000033197) #27
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT01030000234535.F.b #22
Black snub-nosed monkey	MODERN SPECIES	149																ST8SIA4 (ENSRBIG00000029215) #22	ENSRBIG00000009209	FAM174A (ENSRBIG00000028343) #23
Golden snub-nosed monkey	MODERN SPECIES	2803																ST8SIA4 (ENSRROG00000045097) #22	ENSRROG00000001112
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000156053.b	ENSGT00910000148108	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00940000168742	ENSGT00900000141068.m.a #35	ENSGT00850000132411 #36	ENSGT01030000234555.a.a.a.c.a.b
Mas night monkey	MODERN SPECIES	1183			FER (ENSANAG00000023246)	FBXL17 (ENSANAG00000034615)	ENSANAG00000025171	ENSANAG00000025874	EFNA5 (ENSANAG00000030098) #7	NUDT12 (ENSANAG00000025654) #12	MACIR (ENSANAG00000014517) #14	ENSANAG00000023893	PPIP5K2 (ENSANAG00000037695) #15	GIN1 (ENSANAG00000022284) #16	PAM (ENSANAG00000020647) #17	SLCO6A1 (ENSANAG00000023978) #18	SLCO4C1 (ENSANAG00000020847) #19	ST8SIA4 (ENSANAG00000034757) #22	FAM174A (ENSANAG00000028166) #23
Cebidae	ANCESTRAL SPECIES	6	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00940000168742	ENSGT00900000141068.m.a #35	ENSGT00850000132411 #36	ENSGT01030000234555.a.a.a.c.a.b
Marmoset	MODERN SPECIES	11	ENSCJAG00000081616	ENSCJAG00000084737	EFNA5 (ENSCJAG00000016099) #7	ENSCJAG00000071370	ENSCJAG00000068760	NUDT12 (ENSCJAG00000009113) #12	ENSCJAG00000086987	ENSCJAG00000079708	PPIP5K2 (ENSCJAG00000009127) #15	GIN1 (ENSCJAG00000009265) #16	ENSCJAG00000086630	PAM (ENSCJAG00000009287) #17	SLCO6A1 (ENSCJAG00000009478) #18	SLCO4C1 (ENSCJAG00000009487) #19	ENSCJAG00000062358	ST8SIA4 (ENSCJAG00000009539) #22	ENSCJAG00000085444	FAM174A (ENSCJAG00000058504) #23	ENSCJAG00000073433	ENSCJAG00000084274	CHD1 (ENSCJAG00000009559) #25	ENSCJAG00000074073	RGMB (ENSCJAG00000009679) #27	RIOK2 (ENSCJAG00000040045) #28	ENSCJAG00000085734	LNPEP (ENSCJAG00000009724) #30	ERAP2 (ENSCJAG00000009751)	ENSCJAG00000075310	ERAP1 (ENSCJAG00000009832) #31	CAST (ENSCJAG00000009882) #32	ENSCJAG00000085535
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00510000047168	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00940000168742	ENSGT00900000141068.m.a #35	ENSGT00850000132411 #36	ENSGT01030000234555.a.a.a.c.a.b
Bolivian squirrel monkey	MODERN SPECIES	43	ENSSBOG00000025607	ENSSBOG00000023234	FBXL17 (ENSSBOG00000009051)	ENSSBOG00000028873	EFNA5 (ENSSBOG00000035083) #7	ENSSBOG00000021183	NUDT12 (ENSSBOG00000023393) #12	MACIR (ENSSBOG00000016809) #14	PPIP5K2 (ENSSBOG00000020817) #15	ENSSBOG00000034098	GIN1 (ENSSBOG00000034140) #16	ENSSBOG00000032286	PAM (ENSSBOG00000030598) #17	SLCO6A1 (ENSSBOG00000024624) #18	SLCO4C1 (ENSSBOG00000032611) #19	ST8SIA4 (ENSSBOG00000034051) #22	FAM174A (ENSSBOG00000029399) #23	ENSSBOG00000024641	ENSSBOG00000019951	CHD1 (ENSSBOG00000033073) #25	RGMB (ENSSBOG00000020511) #27	ENSSBOG00000026001	ENSSBOG00000022807	RIOK2 (ENSSBOG00000032152) #28	LIX1 (ENSSBOG00000025098) #29	LNPEP (ENSSBOG00000028156) #30	ERAP2 (ENSSBOG00000034572)	ERAP1 (ENSSBOG00000022391) #31	CAST (ENSSBOG00000034231) #32	PCSK1 (ENSSBOG00000034524) #33	ENSSBOG00000031842 #34
Capuchin	MODERN SPECIES	408													ENSCCAG00000025948	SLCO6A1 (ENSCCAG00000022229) #18	SLCO4C1 (ENSCCAG00000023393) #19	ST8SIA4 (ENSCCAG00000025138) #22	FAM174A (ENSCCAG00000021034) #23	ENSCCAG00000031686
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01030000234535.F.b #22
Hedgehog	MODERN SPECIES	1560																ST8SIA4 (ENSEEUG00000014108) #22
Common shrew	MODERN SPECIES	11456																ST8SIA4 (ENSSARG00000003079) #22
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Suina	ANCESTRAL SPECIES	11	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.h #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Chacoan peccary	MODERN SPECIES	204	TMEM232 (ENSCWAG00000000534)	MAN2A1 (ENSCWAG00000000448)	PJA2 (ENSCWAG00000000392)	FER (ENSCWAG00000000276)	ENSCWAG00000000210	ENSCWAG00000000189	EFNA5 (ENSCWAG00000000164) #7	NUDT12 (ENSCWAG00000000109) #12	ENSCWAG00000000060 #13	MACIR (ENSCWAG00000021515) #14	PPIP5K2 (ENSCWAG00000021464) #15	GIN1 (ENSCWAG00000021438) #16	PAM (ENSCWAG00000021377) #17	ENSCWAG00000021344 #18	SLCO4C1 (ENSCWAG00000021326) #19	ST8SIA4 (ENSCWAG00000021317) #22	FAM174A (ENSCWAG00000021311) #23	CHD1 (ENSCWAG00000021282) #25	RGMB (ENSCWAG00000021264) #27	RIOK2 (ENSCWAG00000021258) #28	LIX1 (ENSCWAG00000021245) #29	LNPEP (ENSCWAG00000021234) #30	ERAP2 (ENSCWAG00000021214)	ERAP1 (ENSCWAG00000021173) #31	CAST (ENSCWAG00000021000) #32	PCSK1 (ENSCWAG00000020925) #33	ELL2 (ENSCWAG00000020897) #34	ENSCWAG00000020881 #35	RHOBTB3 (ENSCWAG00000020850) #36	SPATA9 (ENSCWAG00000020829) #37	RFESD (ENSCWAG00000020822)
Pig	MODERN SPECIES	10	ENSSSCG00000044867	ENSSSCG00000046291	FBXL17 (ENSSSCG00000014190)	EFNA5 (ENSSSCG00000036520) #7	ENSSSCG00000049466	NUDT12 (ENSSSCG00000014187) #12	ENSSSCG00000014186 #13	ENSSSCG00000049923	MACIR (ENSSSCG00000038779) #14	PPIP5K2 (ENSSSCG00000024999) #15	GIN1 (ENSSSCG00000025287) #16	PAM (ENSSSCG00000014184) #17	ENSSSCG00000054435	SLCO6A1 (ENSSSCG00000014183) #18	SLCO4C1 (ENSSSCG00000014182) #19	ST8SIA4 (ENSSSCG00000035539) #22	FAM174A (ENSSSCG00000014179) #23	ENSSSCG00000048893	ENSSSCG00000062798	ENSSSCG00000060338	CHD1 (ENSSSCG00000014177) #25	ENSSSCG00000045385 #26	RGMB (ENSSSCG00000014176) #27	ENSSSCG00000036529 #28	LIX1 (ENSSSCG00000023396) #29	LNPEP (ENSSSCG00000014173) #30	ERAP2 (ENSSSCG00000027860)	ERAP1 (ENSSSCG00000014171) #31	CAST (ENSSSCG00000014170) #32	PCSK1 (ENSSSCG00000014169) #33	ELL2 (ENSSSCG00000014168) #34
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36
Camelidae	ANCESTRAL SPECIES	1	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00410000028909 #26	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Arabian camel	MODERN SPECIES	22	TMEM232 (ENSCDRG00005007754)	MAN2A1 (ENSCDRG00005007875)	PJA2 (ENSCDRG00005008119)	FER (ENSCDRG00005008331)	FBXL17 (ENSCDRG00005008603)	EFNA5 (ENSCDRG00005008716) #7	ENSCDRG00005009053	NUDT12 (ENSCDRG00005009086) #12	ENSCDRG00005006352 #13	MACIR (ENSCDRG00005006421) #14	PPIP5K2 (ENSCDRG00005006501) #15	GIN1 (ENSCDRG00005007363) #16	PAM (ENSCDRG00005007464) #17	SLCO4C1 (ENSCDRG00005008150) #19	ENSCDRG00005008209	ST8SIA4 (ENSCDRG00005008300) #22	FAM174A (ENSCDRG00005008335) #23	ENSCDRG00005008375	CHD1 (ENSCDRG00005008408) #25	ENSCDRG00005008489	RGMB (ENSCDRG00005008539) #27	ENSCDRG00005008553 #26	RIOK2 (ENSCDRG00005008601) #28	LIX1 (ENSCDRG00005008671) #29	LNPEP (ENSCDRG00005008715) #30	ERAP2 (ENSCDRG00005008923)	ERAP1 (ENSCDRG00005009185) #31	CAST (ENSCDRG00005009385) #32	PCSK1 (ENSCDRG00005011495) #33	ELL2 (ENSCDRG00005011641) #34	ENSCDRG00005011746 #35
Alpaca	MODERN SPECIES	4557																ST8SIA4 (ENSVPAG00000003710) #22	FAM174A (ENSVPAG00000003712) #23
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00910000147675	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993.k #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Odontoceti	ANCESTRAL SPECIES	1	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00940000166553	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993.k #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Sperm whale	MODERN SPECIES	19	FER (ENSPCTG00005019310)	ENSPCTG00005019238	FBXL17 (ENSPCTG00005019115)	EFNA5 (ENSPCTG00005019013) #7	ENSPCTG00005018881	NUDT12 (ENSPCTG00005018749) #12	ENSPCTG00005018641 #13	MACIR (ENSPCTG00005018615) #14	PPIP5K2 (ENSPCTG00005018254) #15	GIN1 (ENSPCTG00005018108) #16	PAM (ENSPCTG00005017932) #17	ENSPCTG00005017892	ENSPCTG00005017801 #18	SLCO4C1 (ENSPCTG00005017683) #19	ENSPCTG00005017643	ST8SIA4 (ENSPCTG00005017612) #22	FAM174A (ENSPCTG00005017576) #23	CHD1 (ENSPCTG00005017418) #25	ENSPCTG00005017383 #26	ENSPCTG00005017371 #26	RGMB (ENSPCTG00005017324) #27	RIOK2 (ENSPCTG00005017171) #28	LIX1 (ENSPCTG00005017108) #29	LNPEP (ENSPCTG00005017034) #30	ERAP2 (ENSPCTG00005016543)	ERAP1 (ENSPCTG00005016104) #31	ENSPCTG00005009839 #32	PCSK1 (ENSPCTG00005009201) #33	ELL2 (ENSPCTG00005009074) #34	GLRX (ENSPCTG00005009019) #35	RHOBTB3 (ENSPCTG00005008922) #36
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00940000166553	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993.k #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00900000141068.f #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Dolphin	MODERN SPECIES	2006																ST8SIA4 (ENSTTRG00000006304) #22	FAM174A (ENSTTRG00000006299) #23
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00940000166553	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000006621.n.b.a	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993.k #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.f #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT01020000230401.a.a.a.i.a.a	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00510000047602.s.b	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369.e #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT00940000166553	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000006621.n.b.a	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993.k #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Narwhal	MODERN SPECIES	298	EFNA5 (ENSMMNG00015008142) #7	ENSMMNG00015008119	ENSMMNG00015008107	ENSMMNG00015008096	ENSMMNG00015008079	ENSMMNG00015008059	ENSMMNG00015008042	NUDT12 (ENSMMNG00015008002) #12	ENSMMNG00015007981 #13	PPIP5K2 (ENSMMNG00015007856) #15	GIN1 (ENSMMNG00015007787) #16	ENSMMNG00015007750 #17	SLCO6A1 (ENSMMNG00015007635) #18	SLCO4C1 (ENSMMNG00015007574) #19	ENSMMNG00015007471	ST8SIA4 (ENSMMNG00015007448) #22	FAM174A (ENSMMNG00015007430) #23	ENSMMNG00015007415	ENSMMNG00015007407	CHD1 (ENSMMNG00015007351) #25	RGMB (ENSMMNG00015007302) #27	RIOK2 (ENSMMNG00015007246) #28	LIX1 (ENSMMNG00015007211) #29	LNPEP (ENSMMNG00015007190) #30	ERAP2 (ENSMMNG00015007091)	ERAP1 (ENSMMNG00015007036) #31	CAST (ENSMMNG00015006693) #32	PCSK1 (ENSMMNG00015006492) #33	ELL2 (ENSMMNG00015006465) #34	GLRX (ENSMMNG00015006440) #35	RHOBTB3 (ENSMMNG00015006428) #36
Beluga whale	MODERN SPECIES	71	ENSDLEG00000020247	FBXL17 (ENSDLEG00000020248)	EFNA5 (ENSDLEG00000020263) #7	ENSDLEG00000020279	ENSDLEG00000020282	ENSDLEG00000020287	NUDT12 (ENSDLEG00000020299) #12	ENSDLEG00000020303 #13	CUNH5orf30 (ENSDLEG00000020309) #14	PPIP5K2 (ENSDLEG00000020464) #15	GIN1 (ENSDLEG00000021464) #16	ENSDLEG00000021470 #17	SLCO6A1 (ENSDLEG00000021482) #18	SLCO4C1 (ENSDLEG00000021484) #19	ENSDLEG00000021487	ST8SIA4 (ENSDLEG00000021492) #22	FAM174A (ENSDLEG00000021504) #23	ENSDLEG00000021506	CHD1 (ENSDLEG00000021510) #25	RGMB (ENSDLEG00000021523) #27	RIOK2 (ENSDLEG00000021529) #28	LIX1 (ENSDLEG00000021530) #29	LNPEP (ENSDLEG00000021534) #30	ENSDLEG00000011186	ERAP1 (ENSDLEG00000011197) #31	CAST (ENSDLEG00000011265) #32	PCSK1 (ENSDLEG00000011534) #33	ELL2 (ENSDLEG00000011567) #34	ENSDLEG00000011614 #35	RHOBTB3 (ENSDLEG00000011632) #36	SPATA9 (ENSDLEG00000011685) #37
Vaquita	MODERN SPECIES	14	PJA2 (ENSPSNG00000001288)	FER (ENSPSNG00000001378)	ENSPSNG00000001489	FBXL17 (ENSPSNG00000001512)	EFNA5 (ENSPSNG00000001567) #7	ENSPSNG00000001615	NUDT12 (ENSPSNG00000001659) #12	ENSPSNG00000001685 #13	MACIR (ENSPSNG00000001722) #14	PPIP5K2 (ENSPSNG00000001820) #15	GIN1 (ENSPSNG00000001953) #16	PAM (ENSPSNG00000002039) #17	SLCO6A1 (ENSPSNG00000002226) #18	SLCO4C1 (ENSPSNG00000002326) #19	ENSPSNG00000002367	ST8SIA4 (ENSPSNG00000002383) #22	FAM174A (ENSPSNG00000002394) #23	ENSPSNG00000002406	ENSPSNG00000002414	ENSPSNG00000002419	CHD1 (ENSPSNG00000002443) #25	ENSPSNG00000002472	RGMB (ENSPSNG00000002489) #27	ENSPSNG00000002517	RIOK2 (ENSPSNG00000002532) #28	LIX1 (ENSPSNG00000002546) #29	LNPEP (ENSPSNG00000002569) #30	ERAP2 (ENSPSNG00000002612)	ERAP1 (ENSPSNG00000002640) #31	CAST (ENSPSNG00000002825) #32	PCSK1 (ENSPSNG00000003059) #33
Blue whale	MODERN SPECIES	14	FER (ENSBMSG00010004240)	ENSBMSG00010004224	FBXL17 (ENSBMSG00010004208)	EFNA5 (ENSBMSG00010004179) #7	ENSBMSG00010004166	ENSBMSG00010004155	NUDT12 (ENSBMSG00010004123) #12	ENSBMSG00010004106 #13	MACIR (ENSBMSG00010004088) #14	PPIP5K2 (ENSBMSG00010004061) #15	GIN1 (ENSBMSG00010004042) #16	PAM (ENSBMSG00010004014) #17	SLCO6A1 (ENSBMSG00010003962) #18	SLCO4C1 (ENSBMSG00010003884) #19	ENSBMSG00010003873	ST8SIA4 (ENSBMSG00010003853) #22	FAM174A (ENSBMSG00010003845) #23	ENSBMSG00010003838	CHD1 (ENSBMSG00010003822) #25	ENSBMSG00010003813 #26	RGMB (ENSBMSG00010003806) #27	ENSBMSG00010003789	RIOK2 (ENSBMSG00010003777) #28	LIX1 (ENSBMSG00010003766) #29	ERAP2 (ENSBMSG00010003749)	ERAP1 (ENSBMSG00010003735) #31	ENSBMSG00010002505 #32	PCSK1 (ENSBMSG00010002078) #33	ENSBMSG00010002054	ELL2 (ENSBMSG00010002014) #34	ENSBMSG00010001982 #35
Pecora	ANCESTRAL SPECIES		ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Percora_a	ANCESTRAL SPECIES		ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000002517.a.b.a.g.b	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Bovidae	ANCESTRAL SPECIES		ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00390000002517.a.b.a.g.b	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Bovinae	ANCESTRAL SPECIES	2	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670.c #16	ENSGT00390000002517.a.b.a.g.b	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00390000016493.j	ENSGT00940000154828 #34	ENSGT00900000141068.e.a #35	ENSGT00850000132411 #36
Bos	ANCESTRAL SPECIES	3	ENSGT00940000154585.a	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.a.a.a.a.a.a.b	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000009048.a.b #15	ENSGT00940000160670.c #16	ENSGT00390000002517.a.b.a.g.b	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00390000018141.i.a.b.a.a.a.b	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00390000016493.j	ENSGT00940000154828 #34	ENSGT00900000141068.e.a.f #35
Bos_b	ANCESTRAL SPECIES	2	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.a.a.a.a.a.a.b	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000154622.a.a.d	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000009048.a.b #15	ENSGT00940000160670.c #16	ENSGT00390000002517.a.b.a.g.b	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000154517.gb.b	ENSGT00940000157902 #30	ENSGT00390000018141.i.a.b.a.a.a.b	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00390000016493.j	ENSGT00940000154828 #34
Hybrid Bos Indicus	MODERN SPECIES	26	FBXL17 (ENSBIXG00005030009)	ENSBIXG00005030060	ENSBIXG00005030063	EFNA5 (ENSBIXG00005030087) #7	ENSBIXG00005030138	NUDT12 (ENSBIXG00005030170) #12	ENSBIXG00005030222 #13	MACIR (ENSBIXG00005030256) #14	PPIP5K2 (ENSBIXG00005030347) #15	GIN1 (ENSBIXG00005030470) #16	PAM (ENSBIXG00005030508) #17	ENSBIXG00005030584	ENSBIXG00005030596	ENSBIXG00005030609 #18	SLCO4C1 (ENSBIXG00005030638) #19	ST8SIA4 (ENSBIXG00005030660) #22	FAM174A (ENSBIXG00005030677) #23	CHD1 (ENSBIXG00005030719) #25	RGMB (ENSBIXG00005030764) #27	RIOK2 (ENSBIXG00005030795) #28	LIX1 (ENSBIXG00005030803) #29	ENSBIXG00005030808	ENSBIXG00005030819	LNPEP (ENSBIXG00005030834) #30	ERAP2 (ENSBIXG00005030872)	ENSBIXG00005030885	ERAP1 (ENSBIXG00005030891) #31	CAST (ENSBIXG00005030960) #32	PCSK1 (ENSBIXG00005031012) #33	ENSBIXG00005031023	ELL2 (ENSBIXG00005031032) #34
Cow	MODERN SPECIES	26	PJA2 (ENSBTAG00000021675)	FER (ENSBTAG00000003051)	FBXL17 (ENSBTAG00000054662)	EFNA5 (ENSBTAG00000016515) #7	ENSBTAG00000051376	NUDT12 (ENSBTAG00000027728) #12	ENSBTAG00000027727 #13	MACIR (ENSBTAG00000055286) #14	ENSBTAG00000054049	PPIP5K2 (ENSBTAG00000001485) #15	GIN1 (ENSBTAG00000021471) #16	ENSBTAG00000046531	PAM (ENSBTAG00000012387) #17	SLCO6A1 (ENSBTAG00000030210) #18	SLCO4C1 (ENSBTAG00000016359) #19	ST8SIA4 (ENSBTAG00000021445) #22	FAM174A (ENSBTAG00000045909) #23	CHD1 (ENSBTAG00000020860) #25	RGMB (ENSBTAG00000011864) #27	RIOK2 (ENSBTAG00000011763) #28	LIX1 (ENSBTAG00000009772) #29	ENSBTAG00000003118	LNPEP (ENSBTAG00000019900) #30	ERAP2 (ENSBTAG00000039275)	ERAP1 (ENSBTAG00000013557) #31	CAST (ENSBTAG00000000874) #32	PCSK1 (ENSBTAG00000020843) #33	ENSBTAG00000054567	ELL2 (ENSBTAG00000007214) #34	GLRX (ENSBTAG00000038186) #35	RHOBTB3 (ENSBTAG00000004413) #36
Bos_a	ANCESTRAL SPECIES	2	ENSGT00940000154585.a	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.a.a.a.a.a.a.b	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.a.a.a	ENSGT00390000009048.a.b #15	ENSGT00940000160670.c #16	ENSGT00390000002517.a.b.a.g.b	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00390000018141.i.a.b.a.a.a.b	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.e.a.f #35	ENSGT00850000132411 #36
Wild yak	MODERN SPECIES	1688																ST8SIA4 (ENSBMUG00000009329) #22
Domestic yak	MODERN SPECIES	27	PJA2 (ENSBGRG00000020960)	ENSBGRG00000020947	FER (ENSBGRG00000020545)	FBXL17 (ENSBGRG00000020392)	EFNA5 (ENSBGRG00000020213) #7	ENSBGRG00000020177	NUDT12 (ENSBGRG00000020016) #12	ENSBGRG00000019799 #13	MACIR (ENSBGRG00000019769) #14	ENSBGRG00000019734	PPIP5K2 (ENSBGRG00000019149) #15	GIN1 (ENSBGRG00000019005) #16	ENSBGRG00000018984	PAM (ENSBGRG00000018494) #17	SLCO4C1 (ENSBGRG00000017759) #19	ST8SIA4 (ENSBGRG00000017706) #22	FAM174A (ENSBGRG00000017661) #23	ENSBGRG00000017613	CHD1 (ENSBGRG00000017292) #25	RGMB (ENSBGRG00000017176) #27	RIOK2 (ENSBGRG00000016712) #28	LIX1 (ENSBGRG00000016673) #29	ENSBGRG00000016602	LNPEP (ENSBGRG00000015462) #30	ENSBGRG00000015420	ERAP2 (ENSBGRG00000015110)	ERAP1 (ENSBGRG00000014665) #31	CAST (ENSBGRG00000012119) #32	ENSBGRG00000011984	PCSK1 (ENSBGRG00000011702) #33	ENSBGRG00000011667
American bison	MODERN SPECIES	3376				EFNA5 (ENSBBBG00000005022) #7	ENSBBBG00000007469	ENSBBBG00000008393	NUDT12 (ENSBBBG00000008838) #12	ENSBBBG00000020365 #13	MACIR (ENSBBBG00000020370) #14	PPIP5K2 (ENSBBBG00000020508) #15	ENSBBBG00000007049 #16	ENSBBBG00000005548	PAM (ENSBBBG00000020858) #17	ENSBBBG00000020921 #18	SLCO4C1 (ENSBBBG00000020941) #19	ST8SIA4 (ENSBBBG00000007803) #22	ENSBBBG00000020977 #23	CHD1 (ENSBBBG00000021058) #25	RGMB (ENSBBBG00000021070) #27	RIOK2 (ENSBBBG00000021102) #28	LIX1 (ENSBBBG00000021114) #29	ENSBBBG00000021122	LNPEP (ENSBBBG00000021154) #30	ERAP2 (ENSBBBG00000005678)	ERAP1 (ENSBBBG00000021262) #31	CAST (ENSBBBG00000022972) #32	PCSK1 (ENSBBBG00000023124) #33	ENSBBBG00000023130	ELL2 (ENSBBBG00000023145) #34	ENSBBBG00000023168 #35	RHOBTB3 (ENSBBBG00000000494) #36
Caprinae	ANCESTRAL SPECIES	3	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00950000183117.b.cc	ENSGT00940000154828 #34	ENSGT00900000141068.e.a.g #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020020827	ENSOARG00020020796	SLC25A46 (ENSOARG00020020714)	MAN2A1 (ENSOARG00020020490)	PJA2 (ENSOARG00020020210)	FER (ENSOARG00020019949)	EFNA5 (ENSOARG00020019523) #7	ENSOARG00020019255 #19	NUDT12 (ENSOARG00020019140) #12	ENSOARG00020018925 #13	MACIR (ENSOARG00020018893) #14	PPIP5K2 (ENSOARG00020017932) #15	GIN1 (ENSOARG00020017715) #16	PAM (ENSOARG00020017228) #17	SLCO6A1 (ENSOARG00020017030) #18	ST8SIA4 (ENSOARG00020016902) #22	FAM174A (ENSOARG00020016849) #23	CHD1 (ENSOARG00020016365) #25	RGMB (ENSOARG00020016120) #27	ENSOARG00020016068	ENSOARG00020015972	RIOK2 (ENSOARG00020015733) #28	LIX1 (ENSOARG00020015669) #29	LNPEP (ENSOARG00020015364) #30	ERAP2 (ENSOARG00020014806)	ERAP1 (ENSOARG00020014690) #31	CAST (ENSOARG00020012132) #32	PCSK1 (ENSOARG00020011315) #33	ENSOARG00020011249	ELL2 (ENSOARG00020011124) #34	GLRX (ENSOARG00020011055) #35
Goat	MODERN SPECIES	26	FER (ENSCHIG00000016417)	FBXL17 (ENSCHIG00000022659)	EFNA5 (ENSCHIG00000012820) #7	ENSCHIG00000024166	NUDT12 (ENSCHIG00000023629) #12	ENSCHIG00000010732	ENSCHIG00000018058 #13	MACIR (ENSCHIG00000006328) #14	PPIP5K2 (ENSCHIG00000025932) #15	GIN1 (ENSCHIG00000014216) #16	PAM (ENSCHIG00000022277) #17	ENSCHIG00000007820	SLCO6A1 (ENSCHIG00000010171) #18	SLCO4C1 (ENSCHIG00000022821) #19	ENSCHIG00000025134	ST8SIA4 (ENSCHIG00000001988) #22	FAM174A (ENSCHIG00000019281) #23	CHD1 (ENSCHIG00000025395) #25	RGMB (ENSCHIG00000022421) #27	RIOK2 (ENSCHIG00000016709) #28	LIX1 (ENSCHIG00000026823) #29	LNPEP (ENSCHIG00000012539) #30	ERAP2 (ENSCHIG00000018163)	ERAP1 (ENSCHIG00000009713) #31	CAST (ENSCHIG00000027166) #32	ENSCHIG00000009794	PCSK1 (ENSCHIG00000009335) #33	ENSCHIG00000019767	ELL2 (ENSCHIG00000008705) #34	ENSCHIG00000020673 #35	RHOBTB3 (ENSCHIG00000023389) #36
Siberian musk deer	MODERN SPECIES	12																ST8SIA4 (ENSMMSG00000004076) #22	FAM174A (ENSMMSG00000004066) #23	CHD1 (ENSMMSG00000003988) #25	RGMB (ENSMMSG00000003964) #27	RIOK2 (ENSMMSG00000003951) #28	LIX1 (ENSMMSG00000003939) #29	LNPEP (ENSMMSG00000003917) #30	ERAP2 (ENSMMSG00000003902)	ERAP1 (ENSMMSG00000003884) #31	CAST (ENSMMSG00000003316) #32	PCSK1 (ENSMMSG00000003201) #33	ENSMMSG00000003184	ELL2 (ENSMMSG00000003142) #34	GLRX (ENSMMSG00000003115) #35	RHOBTB3 (ENSMMSG00000003076) #36	SPATA9 (ENSMMSG00000003043) #37
Yarkand deer	MODERN SPECIES	32	FER (ENSCHYG00000012349)	ENSCHYG00000012204	ENSCHYG00000012186	FBXL17 (ENSCHYG00000012146)	EFNA5 (ENSCHYG00000012094) #7	NUDT12 (ENSCHYG00000011928) #12	ENSCHYG00000011881 #13	MACIR (ENSCHYG00000011838) #14	PPIP5K2 (ENSCHYG00000010817) #15	GIN1 (ENSCHYG00000010672) #16	PAM (ENSCHYG00000009437) #17	ENSCHYG00000009259 #18	ENSCHYG00000009224	SLCO4C1 (ENSCHYG00000009174) #19	ENSCHYG00000008014	ST8SIA4 (ENSCHYG00000007904) #22	ENSCHYG00000007856 #23	ENSCHYG00000007845	CHD1 (ENSCHYG00000007522) #25	RGMB (ENSCHYG00000007466) #27	RIOK2 (ENSCHYG00000007384) #28	LIX1 (ENSCHYG00000007323) #29	ENSCHYG00000007295	LNPEP (ENSCHYG00000007074) #30	ERAP2 (ENSCHYG00000006967)	ERAP1 (ENSCHYG00000006853) #31	CAST (ENSCHYG00000005638) #32	PCSK1 (ENSCHYG00000005232) #33	ENSCHYG00000004970 #34	ENSCHYG00000004941 #35	RHOBTB3 (ENSCHYG00000004814) #36
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008
Carnivora	ANCESTRAL SPECIES	8	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT01030000240353	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008
Caniformia	ANCESTRAL SPECIES	5	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT01030000240353	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT01030000240353	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008
Ursidae	ANCESTRAL SPECIES	16								ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00950000185035.a	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35
Giant Panda	MODERN SPECIES	13	PJA2 (ENSAMEG00000011834)	FER (ENSAMEG00000001337)	ENSAMEG00000001331	ENSAMEG00000001324 #7	ENSAMEG00000024378	ENSAMEG00000003266	ENSAMEG00000003285	ENSAMEG00000016888 #12	ENSAMEG00000027576 #13	MACIR (ENSAMEG00000018936) #14	PPIP5K2 (ENSAMEG00000016903) #15	GIN1 (ENSAMEG00000016917) #16	PAM (ENSAMEG00000016920) #17	SLCO6A1 (ENSAMEG00000009416) #18	SLCO4C1 (ENSAMEG00000009401) #19	ST8SIA4 (ENSAMEG00000004139) #22	ENSAMEG00000023942	FAM174A (ENSAMEG00000004130) #23	CHD1 (ENSAMEG00000014644) #25	ENSAMEG00000014639 #26	ENSAMEG00000024012 #27	ENSAMEG00000013614	RIOK2 (ENSAMEG00000014615) #28	LIX1 (ENSAMEG00000014595) #29	ENSAMEG00000027326	LNPEP (ENSAMEG00000014548) #30	ERAP2 (ENSAMEG00000014503)	ERAP1 (ENSAMEG00000012988) #31	CAST (ENSAMEG00000012928) #32	PCSK1 (ENSAMEG00000018229) #33	ELL2 (ENSAMEG00000010607) #34
Ursus	ANCESTRAL SPECIES	142																ENSGT01030000234535.F.b #22	ENSGT00950000185035.a	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008	ENSGT00850000132411 #36
Polar bear	MODERN SPECIES	228																ST8SIA4 (ENSUMAG00000008509) #22	ENSUMAG00000008505	ENSUMAG00000008501	CHD1 (ENSUMAG00000006896) #25	ENSUMAG00000006738 #26	RGMB (ENSUMAG00000006735) #27	ENSUMAG00000006729	RIOK2 (ENSUMAG00000006726) #28	LIX1 (ENSUMAG00000006723) #29	LNPEP (ENSUMAG00000006711) #30	ERAP2 (ENSUMAG00000006699)	ERAP1 (ENSUMAG00000006692) #31	CAST (ENSUMAG00000006633) #32	PCSK1 (ENSUMAG00000006590) #33	ELL2 (ENSUMAG00000006524) #34	GLRX (ENSUMAG00000006508) #35
Mustelinae	ANCESTRAL SPECIES	38	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT01030000240353	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000012420.h	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Ferret	MODERN SPECIES	308							ENSMPUG00000003911	NUDT12 (ENSMPUG00000003901) #12	ENSMPUG00000003866 #13	MACIR (ENSMPUG00000018472) #14	PPIP5K2 (ENSMPUG00000003843) #15	GIN1 (ENSMPUG00000003837) #16	PAM (ENSMPUG00000003813) #17	SLCO6A1 (ENSMPUG00000003796) #18	SLCO4C1 (ENSMPUG00000003784) #19	ST8SIA4 (ENSMPUG00000003776) #22	FAM174A (ENSMPUG00000003771) #23	ENSMPUG00000003764	CHD1 (ENSMPUG00000003750) #25	RGMB (ENSMPUG00000003744) #27
American mink	MODERN SPECIES	300																SIA8D (ENSNVIG00000021955) #22	FAM174A (ENSNVIG00000021948) #23	ENSNVIG00000021943
Canidae	ANCESTRAL SPECIES	52	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00730000111212	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00390000001830.j	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255.c #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00730000111212.q.a	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00390000001830.j	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00390000017282.o	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255.c #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35
Dog	MODERN SPECIES	22	PJA2 (ENSCAFG00845000212)	FER (ENSCAFG00845000339)	FBXL17 (ENSCAFG00845000464)	LSM8 (ENSCAFG00845000484)	EFNA5 (ENSCAFG00845000512) #7	ENSCAFG00845000582	ENSCAFG00845000704	NUDT12 (ENSCAFG00845000770) #12	ENSCAFG00845000832 #13	MACIR (ENSCAFG00845000857) #14	PPIP5K2 (ENSCAFG00845001037) #15	GIN1 (ENSCAFG00845001384) #16	PAM (ENSCAFG00845001601) #17	SLCO6A1 (ENSCAFG00845001964) #18	SLCO4C1 (ENSCAFG00845002027) #19	ST8SIA4 (ENSCAFG00845002101) #22	FAM174A (ENSCAFG00845002170) #23	ENSCAFG00845002178	CHD1 (ENSCAFG00845002210) #25	RGMB (ENSCAFG00845002266) #27	ENSCAFG00845002281 #26	RIOK2 (ENSCAFG00845002323) #28	LIX1 (ENSCAFG00845002334) #29	ENSCAFG00845002360	LNPEP (ENSCAFG00845002437) #30	ERAP1 (ENSCAFG00845002563) #31	CAST (ENSCAFG00845002762) #32	PCSK1 (ENSCAFG00845003112) #33	ENSCAFG00845013588	ELL2 (ENSCAFG00845013696) #34	GLRX (ENSCAFG00845013738) #35
Dingo	MODERN SPECIES	138	ENSCAFG00020012690	ENSCAFG00020012662	ENSCAFG00020012646	ENSCAFG00020012622	ENSCAFG00020012617	NUDT12 (ENSCAFG00020012607) #12	ENSCAFG00020012606 #13	ENSCAFG00020012597 #13	MACIR (ENSCAFG00020012590) #14	PPIP5K2 (ENSCAFG00020012160) #15	GIN1 (ENSCAFG00020012078) #16	PAM (ENSCAFG00020012061) #17	SLCO6A1 (ENSCAFG00020012017) #18	SLCO4C1 (ENSCAFG00020012011) #19	ENSCAFG00020011982	ST8SIA4 (ENSCAFG00020011976) #22	FAM174A (ENSCAFG00020011970) #23	ENSCAFG00020011969	ENSCAFG00020011959	ENSCAFG00020011942	CHD1 (ENSCAFG00020011541) #25	ENSCAFG00020011517 #26	RGMB (ENSCAFG00020011515) #27	ENSCAFG00020011513	ENSCAFG00020011504	ENSCAFG00020011488	ENSCAFG00020011484	ENSCAFG00020011453 #28	LIX1 (ENSCAFG00020011435) #29	LNPEP (ENSCAFG00020011424) #30	ERAP2 (ENSCAFG00020011413)
Red fox	MODERN SPECIES	11	ENSVVUG00000013246	ENSVVUG00000013248	EFNA5 (ENSVVUG00000013271) #7	ENSVVUG00000013288	ENSVVUG00000013293	ENSVVUG00000013325	NUDT12 (ENSVVUG00000013331) #12	ENSVVUG00000013337 #13	CUNH5orf30 (ENSVVUG00000013357) #14	PPIP5K2 (ENSVVUG00000013495) #15	GIN1 (ENSVVUG00000019618) #16	PAM (ENSVVUG00000019687) #17	SLCO6A1 (ENSVVUG00000020025) #18	ENSVVUG00000020035	SLCO4C1 (ENSVVUG00000020047) #19	ST8SIA4 (ENSVVUG00000020099) #22	FAM174A (ENSVVUG00000020104) #23	ENSVVUG00000020117	ENSVVUG00000020121	CHD1 (ENSVVUG00000020132) #25	RGMB (ENSVVUG00000020140) #27	ENSVVUG00000020151	RIOK2 (ENSVVUG00000020170) #28	LIX1 (ENSVVUG00000020181) #29	LNPEP (ENSVVUG00000020196) #30	ERAP2 (ENSVVUG00000020208)	ERAP1 (ENSVVUG00000020256) #31	CAST (ENSVVUG00000021741) #32	PCSK1 (ENSVVUG00000021762) #33	ENSVVUG00000021812	ELL2 (ENSVVUG00000021814) #34
Felidae	ANCESTRAL SPECIES	6	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT01030000240353	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.i #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Panthera	ANCESTRAL SPECIES	6	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT01030000240353	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00410000028909 #26	ENSGT00390000009724.l.gb.b	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.i #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Tiger	MODERN SPECIES	122														SLCO6A1 (ENSPTIG00000018685) #18	SLCO4C1 (ENSPTIG00000020890) #19	ST8SIA4 (ENSPTIG00000005750) #22	FAM174A (ENSPTIG00000006177) #23	CHD1 (ENSPTIG00000006479) #25	RGMB (ENSPTIG00000007285) #27	ENSPTIG00000003875 #26	ENSPTIG00000003913	RIOK2 (ENSPTIG00000008344) #28	LIX1 (ENSPTIG00000009178) #29	LNPEP (ENSPTIG00000009348) #30	ERAP1 (ENSPTIG00000012148) #31	CAST (ENSPTIG00000015418) #32	PCSK1 (ENSPTIG00000014077) #33	ELL2 (ENSPTIG00000015236) #34	GLRX (ENSPTIG00000015592) #35	RHOBTB3 (ENSPTIG00000015975) #36	SPATA9 (ENSPTIG00000016683) #37
Panthera_a	ANCESTRAL SPECIES	3	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT01030000240353	ENSGT00990000209181	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00410000028909 #26	ENSGT00390000009724.l.gb.b	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.i #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
lion	MODERN SPECIES		MAN2A1 (ENSPLOG00000005815)	PJA2 (ENSPLOG00000005863)	FER (ENSPLOG00000005950)	FBXL17 (ENSPLOG00000006073)	EFNA5 (ENSPLOG00000006135) #7	ENSPLOG00000006190	ENSPLOG00000006238	NUDT12 (ENSPLOG00000006277) #12	ENSPLOG00000006327 #13	MACIR (ENSPLOG00000006381) #14	PPIP5K2 (ENSPLOG00000006481) #15	GIN1 (ENSPLOG00000006709) #16	PAM (ENSPLOG00000006819) #17	SLCO6A1 (ENSPLOG00000006928) #18	SLCO4C1 (ENSPLOG00000007019) #19	ST8SIA4 (ENSPLOG00000007088) #22	FAM174A (ENSPLOG00000007124) #23	CHD1 (ENSPLOG00000007165) #25	RGMB (ENSPLOG00000007237) #27	ENSPLOG00000007268	ENSPLOG00000007291	RIOK2 (ENSPLOG00000007303) #28	LIX1 (ENSPLOG00000007339) #29	LNPEP (ENSPLOG00000007365) #30	ERAP1 (ENSPLOG00000007441) #31	CAST (ENSPLOG00000007841) #32	PCSK1 (ENSPLOG00000009358) #33	ELL2 (ENSPLOG00000009497) #34	ENSPLOG00000009523 #35	RHOBTB3 (ENSPLOG00000009549) #36	SPATA9 (ENSPLOG00000009570) #37
leopard	MODERN SPECIES	18	ENSPPRG00000001653	ENSPPRG00000001438	FBXL17 (ENSPPRG00000000716)	EFNA5 (ENSPPRG00000020837) #7	ENSPPRG00000015001	ENSPPRG00000014591	ENSPPRG00000013660	NUDT12 (ENSPPRG00000013248) #12	ENSPPRG00000012860 #13	MACIR (ENSPPRG00000016298) #14	PPIP5K2 (ENSPPRG00000012282) #15	GIN1 (ENSPPRG00000006447) #16	PAM (ENSPPRG00000005749) #17	ENSPPRG00000003887 #18	SLCO4C1 (ENSPPRG00000003202) #19	ST8SIA4 (ENSPPRG00000001740) #22	FAM174A (ENSPPRG00000001114) #23	ENSPPRG00000001022	CHD1 (ENSPPRG00000000722) #25	RGMB (ENSPPRG00000000047) #27	ENSPPRG00000015940 #26	ENSPPRG00000015915
Cat	MODERN SPECIES		ENSFCAG00000044687	ENSFCAG00000050959 #21	FBXL17 (ENSFCAG00000046291)	ENSFCAG00000025841	EFNA5 (ENSFCAG00000037704) #7	ENSFCAG00000030510	ENSFCAG00000036958	NUDT12 (ENSFCAG00000013687) #12	ENSFCAG00000023062 #13	MACIR (ENSFCAG00000010385) #14	PPIP5K2 (ENSFCAG00000023803) #15	GIN1 (ENSFCAG00000025003) #16	PAM (ENSFCAG00000006174) #17	SLCO6A1 (ENSFCAG00000019119) #18	SLCO4C1 (ENSFCAG00000025960) #19	ST8SIA4 (ENSFCAG00000021920) #22	FAM174A (ENSFCAG00000024243) #23	ENSFCAG00000049038	CHD1 (ENSFCAG00000028939) #25	RGMB (ENSFCAG00000045583) #27	RIOK2 (ENSFCAG00000024077) #28	LIX1 (ENSFCAG00000036976) #29	ENSFCAG00000048439	LNPEP (ENSFCAG00000004970) #30	ERAP1 (ENSFCAG00000004966) #31	CAST (ENSFCAG00000004964) #32	PCSK1 (ENSFCAG00000006327) #33	ENSFCAG00000027572 #35	RHOBTB3 (ENSFCAG00000024219) #36	ELL2 (ENSFCAG00000023599) #34	SPATA9 (ENSFCAG00000024535) #37
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Equus	ANCESTRAL SPECIES	6	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Horse	MODERN SPECIES	5	ENSECAG00000046988	ENSECAG00000024695	FBXL17 (ENSECAG00000011896)	ENSECAG00000049116	EFNA5 (ENSECAG00000012062) #7	NUDT12 (ENSECAG00000015093) #12	ENSECAG00000053521 #13	ENSECAG00000015785 #13	MACIR (ENSECAG00000036575) #14	PPIP5K2 (ENSECAG00000016632) #15	GIN1 (ENSECAG00000020873) #16	PAM (ENSECAG00000021895) #17	SLCO6A1 (ENSECAG00000007048) #18	SLCO4C1 (ENSECAG00000009100) #19	ENSECAG00000046213	ST8SIA4 (ENSECAG00000011406) #22	FAM174A (ENSECAG00000011841) #23	ENSECAG00000055659 #21	CHD1 (ENSECAG00000012445) #25	RGMB (ENSECAG00000018369) #27	ENSECAG00000056503 #26	RIOK2 (ENSECAG00000018441) #28	LIX1 (ENSECAG00000021643) #29	ENSECAG00000039277	LNPEP (ENSECAG00000021790) #30	ERAP2 (ENSECAG00000024465)	ERAP1 (ENSECAG00000003636) #31	CAST (ENSECAG00000013676) #32	ENSECAG00000031677	PCSK1 (ENSECAG00000020422) #33	ELL2 (ENSECAG00000022933) #34
Donkey	MODERN SPECIES	2	MAN2A1 (ENSEASG00005015737)	PJA2 (ENSEASG00005015749)	ENSEASG00005015753	ENSEASG00005036232	ENSEASG00005015769	FBXL17 (ENSEASG00005015766)	EFNA5 (ENSEASG00005015772) #7	NUDT12 (ENSEASG00005015778) #12	ENSEASG00005015783 #13	MACIR (ENSEASG00005026920) #14	PPIP5K2 (ENSEASG00005015801) #15	GIN1 (ENSEASG00005015827) #16	PAM (ENSEASG00005015841) #17	SLCO6A1 (ENSEASG00005033983) #18	SLCO4C1 (ENSEASG00005015860) #19	ENSEASG00005015872 #22	ENSEASG00005015877 #23	ENSEASG00005026132	ENSEASG00005023017	ENSEASG00005016110 #25	ENSEASG00005024325 #26	RGMB (ENSEASG00005018795) #27	ENSEASG00005018798	RIOK2 (ENSEASG00005018799) #28	LIX1 (ENSEASG00005029451) #29	ENSEASG00005025234	LNPEP (ENSEASG00005018806) #30	ERAP2 (ENSEASG00005018877)	ERAP1 (ENSEASG00005019249) #31	CAST (ENSEASG00005019257) #32	ENSEASG00005033351
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Greater horseshoe bat	MODERN SPECIES	25	SLC25A46 (ENSRFEG00010012666)	TMEM232 (ENSRFEG00010012482)	MAN2A1 (ENSRFEG00010012193)	PJA2 (ENSRFEG00010012026)	FER (ENSRFEG00010011498)	FBXL17 (ENSRFEG00010011260)	EFNA5 (ENSRFEG00010011082) #7	NUDT12 (ENSRFEG00010010948) #12	ENSRFEG00010010775 #13	MACIR (ENSRFEG00010010741) #14	PPIP5K2 (ENSRFEG00010010456) #15	GIN1 (ENSRFEG00010010278) #16	PAM (ENSRFEG00010010028) #17	SLCO6A1 (ENSRFEG00010009884) #18	SLCO4C1 (ENSRFEG00010009830) #19	ST8SIA4 (ENSRFEG00010009786) #22	FAM174A (ENSRFEG00010009753) #23	ENSRFEG00010009740	CHD1 (ENSRFEG00010009657) #25	RGMB (ENSRFEG00010009568) #27	ENSRFEG00010009543 ##11	ENSRFEG00010009355 #28	LIX1 (ENSRFEG00010009323) #29	LNPEP (ENSRFEG00010009269) #30	ERAP2 (ENSRFEG00010009185)	ENSRFEG00010009157	ERAP1 (ENSRFEG00010009095) #31	CAST (ENSRFEG00010008436) #32	PCSK1 (ENSRFEG00010008222) #33	ELL2 (ENSRFEG00010008164) #34	GLRX (ENSRFEG00010008129) #35
Microbat	MODERN SPECIES	937	ENSMLUG00000011004	ENSMLUG00000000367	ENSMLUG00000025300	ENSMLUG00000028326	EFNA5 (ENSMLUG00000009930) #7	NUDT12 (ENSMLUG00000014521) #12	ENSMLUG00000026844 #13	ENSMLUG00000025570	MACIR (ENSMLUG00000000868) #14	PPIP5K2 (ENSMLUG00000000847) #15	ENSMLUG00000024588	GIN1 (ENSMLUG00000025218) #16	PAM (ENSMLUG00000000826) #17	ENSMLUG00000003988 #18	SLCO4C1 (ENSMLUG00000001943) #19	ST8SIA4 (ENSMLUG00000016346) #22	FAM174A (ENSMLUG00000009103) #23	CHD1 (ENSMLUG00000016014) #25	RGMB (ENSMLUG00000000422) #27	ENSMLUG00000027844	ENSMLUG00000023104	RIOK2 (ENSMLUG00000016113) #28	LIX1 (ENSMLUG00000016110) #29	LNPEP (ENSMLUG00000016096) #30	ERAP2 (ENSMLUG00000016082)	ERAP1 (ENSMLUG00000016064) #31	CAST (ENSMLUG00000016051) #32	PCSK1 (ENSMLUG00000007002) #33	ELL2 (ENSMLUG00000005340) #34	ENSMLUG00000007846 #35	RHOBTB3 (ENSMLUG00000007820) #36
Megabat	MODERN SPECIES	3																ST8SIA4 (ENSPVAG00000005283) #22
Atlantogenata	ANCESTRAL SPECIES		ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
Xenarthra	ANCESTRAL SPECIES																	ENSGT01030000234535.F.b #22
Armadillo	MODERN SPECIES	1454																ST8SIA4 (ENSDNOG00000046147) #22	ENSDNOG00000040306	SMARCA2 (ENSDNOG00000006402)	VLDLR (ENSDNOG00000001086)	KCNV2 (ENSDNOG00000041737)	PUM3 (ENSDNOG00000008157)	RFX3 (ENSDNOG00000018668)	ENSDNOG00000012636	ENSDNOG00000042655	ENSDNOG00000035748	ENSDNOG00000042157	SLC1A1 (ENSDNOG00000001798)	SPATA6L (ENSDNOG00000038916)	PLPP6 (ENSDNOG00000015974)	CDC37L1 (ENSDNOG00000015975)	AK3 (ENSDNOG00000038787)
Sloth	MODERN SPECIES	1295																ST8SIA4 (ENSCHOG00000007451) #22
Afrotheria	ANCESTRAL SPECIES	91	ENSGT00390000012541	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Tenrec	MODERN SPECIES	1510																ST8SIA4 (ENSETEG00000018257) #22
Afrotheria_a	ANCESTRAL SPECIES	93	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585.a	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Elephant	MODERN SPECIES	2	ENSLAFG00000029326	ENSLAFG00000007779	ENSLAFG00000028922	PJA2 (ENSLAFG00000001431)	FER (ENSLAFG00000013076)	ENSLAFG00000029565	FBXL17 (ENSLAFG00000006336)	EFNA5 (ENSLAFG00000004057) #7	NUDT12 (ENSLAFG00000032137) #12	MACIR (ENSLAFG00000004277) #14	PPIP5K2 (ENSLAFG00000007546) #15	GIN1 (ENSLAFG00000007544) #16	PAM (ENSLAFG00000007536) #17	ENSLAFG00000016752 #18	SLCO4C1 (ENSLAFG00000002750) #19	ST8SIA4 (ENSLAFG00000006116) #22	FAM174A (ENSLAFG00000022950) #23	CHD1 (ENSLAFG00000023183) #25	RGMB (ENSLAFG00000009238) #27	RIOK2 (ENSLAFG00000000919) #28	LIX1 (ENSLAFG00000030497) #29	LNPEP (ENSLAFG00000011571) #30	ERAP2 (ENSLAFG00000011564)	ERAP1 (ENSLAFG00000006258) #31	CAST (ENSLAFG00000006251) #32	PCSK1 (ENSLAFG00000005220) #33	ENSLAFG00000029170	ELL2 (ENSLAFG00000018397) #34	ENSLAFG00000000913 #35	RHOBTB3 (ENSLAFG00000006236) #36	SPATA9 (ENSLAFG00000001809) #37
Hyrax	MODERN SPECIES	1181																ST8SIA4 (ENSPCAG00000010571) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00950000183158.E	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D.d #18	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Marsupialia_b	ANCESTRAL SPECIES	27	ENSGT00390000003837	ENSGT00940000158626	ENSGT00940000153988.B	ENSGT00950000183128.A	ENSGT00940000158373	ENSGT00950000182904.a.b.a	ENSGT00940000155826	ENSGT00390000016521	ENSGT00940000159243	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000006753.B	ENSGT00530000063851.b	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT01060000248556.B.t	ENSGT00390000001523
Diprotodontia	ANCESTRAL SPECIES	39	ENSGT00390000003837	ENSGT00940000158626	ENSGT00940000153988.B	ENSGT00950000183128.A	ENSGT00940000158373	ENSGT00950000182904.a.b.a	ENSGT00940000155826	ENSGT00390000016521	ENSGT00940000159243	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000006753.B	ENSGT00530000063851.b	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT01060000248556.B.t	ENSGT00390000001523	ENSGT00390000003156.a.a
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00390000003837	ENSGT00940000158626	ENSGT00940000153988.B	ENSGT00950000183128.A	ENSGT00940000158373	ENSGT00950000182904.a.b.a	ENSGT00940000155826	ENSGT00390000016521	ENSGT00940000159243	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000006753.B	ENSGT00530000063851.b	ENSGT01080000257410.D.c #19	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000169145.a	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B.g
Common wonbat	MODERN SPECIES	1029	CCDC112 (ENSVURG00010006372)	PGGT1B (ENSVURG00010006384)	TRIM36 (ENSVURG00010006391)	KCNN2 (ENSVURG00010006397)	ENSVURG00010006408	YTHDC2 (ENSVURG00010006418)	NREP (ENSVURG00010006441)	STARD4 (ENSVURG00010006464)	CAMK4 (ENSVURG00010006475)	WDR36 (ENSVURG00010006483)	SLC25A46 (ENSVURG00010006496)	ISOC1 (ENSVURG00010006507)	MINAR2 (ENSVURG00010006517)	SLCO4C1 (ENSVURG00010006527) #19	ENSVURG00010006579	ST8SIA4 (ENSVURG00010006591) #22	ENSVURG00010006608
koala	MODERN SPECIES	5	ENSPCIG00000004296	PGGT1B (ENSPCIG00000004310)	TRIM36 (ENSPCIG00000004316)	KCNN2 (ENSPCIG00000004329)	ENSPCIG00000004337	YTHDC2 (ENSPCIG00000004342)	NREP (ENSPCIG00000004366)	STARD4 (ENSPCIG00000004370)	ENSPCIG00000004379	CAMK4 (ENSPCIG00000032166)	WDR36 (ENSPCIG00000004387)	SLC25A46 (ENSPCIG00000004398)	ISOC1 (ENSPCIG00000004409)	ENSPCIG00000004413	SLCO4C1 (ENSPCIG00000004421) #19	ST8SIA4 (ENSPCIG00000023662) #22	FAM174A (ENSPCIG00000004333) #23	CHD1 (ENSPCIG00000028450) #25	ENSPCIG00000028455	RGMB (ENSPCIG00000028456) #27	RIOK2 (ENSPCIG00000012335) #28	LIX1 (ENSPCIG00000012337) #29	LNPEP (ENSPCIG00000012341) #30	ERAP1 (ENSPCIG00000015720) #31	CAST (ENSPCIG00000015698) #32	ENSPCIG00000015693	PCSK1 (ENSPCIG00000014935) #33	ELL2 (ENSPCIG00000015657) #34	ENSPCIG00000035420 #35	RHOBTB3 (ENSPCIG00000015648) #36	ENSPCIG00000015642
Wallaby	MODERN SPECIES	2244																ST8SIA4 (ENSMEUG00000001754) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000021327	CCDC112 (ENSSHAG00000010298)	PGGT1B (ENSSHAG00000009842)	TRIM36 (ENSSHAG00000008943)	ENSSHAG00000006426	ENSSHAG00000003101	ENSSHAG00000020686	ENSSHAG00000026853	ENSSHAG00000022496	CAMK4 (ENSSHAG00000021220)	ENSSHAG00000003687	ENSSHAG00000028785	ENSSHAG00000002069	ENSSHAG00000022725	ENSSHAG00000007350 #19	ST8SIA4 (ENSSHAG00000003166) #22	FAM174A (ENSSHAG00000020642) #23	CHD1 (ENSSHAG00000010054) #25	ENSSHAG00000030491 #26	RGMB (ENSSHAG00000022896) #27	ENSSHAG00000007959	ENSSHAG00000022311	RIOK2 (ENSSHAG00000006935) #28	LIX1 (ENSSHAG00000005833) #29	LNPEP (ENSSHAG00000000919) #30	ERAP1 (ENSSHAG00000002526) #31	ENSSHAG00000003573 #32	PCSK1 (ENSSHAG00000002927) #33	ENSSHAG00000009684 #34	GLRX (ENSSHAG00000029946) #35	RHOBTB3 (ENSSHAG00000010644) #36
Opossum	MODERN SPECIES	2	ENSMODG00000048576	ENSMODG00000041881	FBXL17 (ENSMODG00000019413)	EFNA5 (ENSMODG00000041066) #7	ENSMODG00000043217 #21	ENSMODG00000049482	NUDT12 (ENSMODG00000019328) #12	ENSMODG00000019326 #13	ENSMODG00000044807 #13	MACIR (ENSMODG00000025426) #14	PPIP5K2 (ENSMODG00000019292) #15	GIN1 (ENSMODG00000019288) #16	PAM (ENSMODG00000019284) #17	ENSMODG00000019281 #18	SLCO4C1 (ENSMODG00000019279) #19	ST8SIA4 (ENSMODG00000019277) #22	FAM174A (ENSMODG00000019275) #23	ENSMODG00000019272	ENSMODG00000019271	CHD1 (ENSMODG00000019266) #25	DIRAS2 (ENSMODG00000025431)	ENSMODG00000025432	SYK (ENSMODG00000019263)	ENSMODG00000051106	AUH (ENSMODG00000019240)	NFIL3 (ENSMODG00000025436)	ENSMODG00000042937	ROR2 (ENSMODG00000019238)	ENSMODG00000029770	SPTLC1 (ENSMODG00000019222)	HINT1 (ENSMODG00000041924)
Platypus	MODERN SPECIES		ENSOANG00000039622	ITGA2 (ENSOANG00000011203)	ITGA1 (ENSOANG00000051210)	PELO (ENSOANG00000043141)	ISL1 (ENSOANG00000010771)	PARP8 (ENSOANG00000012952)	EMB (ENSOANG00000040880)	HCN1 (ENSOANG00000046041)	GPX8 (ENSOANG00000012665)	ENSOANG00000050702	DHX29 (ENSOANG00000004883)	MTREX (ENSOANG00000004885)	ENSOANG00000047592	SLC38A9 (ENSOANG00000004887)	ENSOANG00000004888	ST8SIA4 (ENSOANG00000004890) #22	ENSOANG00000039368 #23	ENSOANG00000046568	CHD1 (ENSOANG00000004891) #25	RGMB (ENSOANG00000046585) #27	RIOK2 (ENSOANG00000001225) #28	LIX1 (ENSOANG00000042534) #29	LNPEP (ENSOANG00000001221) #30	ERAP2 (ENSOANG00000001217)	ERAP1 (ENSOANG00000001214) #31	CAST (ENSOANG00000001211) #32	PCSK1 (ENSOANG00000001210) #33	ELL2 (ENSOANG00000001209) #34	GLRX (ENSOANG00000048801) #35	RHOBTB3 (ENSOANG00000037307) #36	ENSOANG00000009205
Sauria	ANCESTRAL SPECIES	5	ENSGT00390000014003	ENSGT00970000198259	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00940000175463	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00390000014003	ENSGT00970000198259	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00940000175463	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008	ENSGT00940000175373
tuatara	MODERN SPECIES	493									NUDT12 (ENSSPUG00000004073) #12	ENSSPUG00000004039 #13	MACIR (ENSSPUG00000004014) #14	PPIP5K2 (ENSSPUG00000003928) #15	GIN1 (ENSSPUG00000003794) #16	PAM (ENSSPUG00000003711) #17	ENSSPUG00000003574 #18	ST8SIA4 (ENSSPUG00000003546) #22
Episquamata	ANCESTRAL SPECIES	6	ENSGT00390000014003	ENSGT00970000198259	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36	ENSGT01070000253950
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000014003	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37	ENSGT00390000018225.B
Argentine black and white tegu	MODERN SPECIES	10										NUDT12 (ENSSMRG00000012820) #12	ENSSMRG00000012819 #13	PPIP5K2 (ENSSMRG00000012804) #15	GIN1 (ENSSMRG00000012803) #16	PAM (ENSSMRG00000012802) #17	ENSSMRG00000012792 #18	ST8SIA4 (ENSSMRG00000012787) #22	FAM174A (ENSSMRG00000012780) #23	CHD1 (ENSSMRG00000008157) #25	RGMB (ENSSMRG00000008102) #27	RIOK2 (ENSSMRG00000008088) #28	LIX1 (ENSSMRG00000008086) #29	LNPEP (ENSSMRG00000008084) #30	ERAP1 (ENSSMRG00000008068) #31	CAST (ENSSMRG00000008060) #32	PCSK1 (ENSSMRG00000008026) #33	ELL2 (ENSSMRG00000008000) #34	ENSSMRG00000007997 #35	RHOBTB3 (ENSSMRG00000007993) #36	ENSSMRG00000007939	SPATA9 (ENSSMRG00000007936) #37	RFESD (ENSSMRG00000007933)
Common wall lizard	MODERN SPECIES	2	ENSPMRG00000011771	FBXL17 (ENSPMRG00000011717)	ENSPMRG00000011687	EFNA5 (ENSPMRG00000011681) #7	ENSPMRG00000011675	ENSPMRG00000011672	ENSPMRG00000011663	NUDT12 (ENSPMRG00000011651) #12	ENSPMRG00000011638 #13	PPIP5K2 (ENSPMRG00000011575) #15	GIN1 (ENSPMRG00000011554) #16	PAM (ENSPMRG00000013958) #17	ENSPMRG00000013926 #18	ENSPMRG00000013918	ENSPMRG00000013917	ST8SIA4 (ENSPMRG00000013910) #22	FAM174A (ENSPMRG00000013904) #23	ENSPMRG00000013898	CHD1 (ENSPMRG00000013798) #25	ENSPMRG00000013762 #26	RGMB (ENSPMRG00000013758) #27	ENSPMRG00000013755	RIOK2 (ENSPMRG00000013751) #28	LIX1 (ENSPMRG00000013748) #29	LNPEP (ENSPMRG00000013515) #30	ERAP1 (ENSPMRG00000013454) #31	CAST (ENSPMRG00000013374) #32	ENSPMRG00000013366	PCSK1 (ENSPMRG00000013359) #33	ELL2 (ENSPMRG00000013353) #34	ENSPMRG00000013350
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00390000015874	ENSGT00390000014003	ENSGT00970000198259	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36	ENSGT01070000253950	ENSGT00390000014160 #37
Lizard	MODERN SPECIES	807	NUDT12 (ENSACAG00000006752) #12	ENSACAG00000006727 #13	MACIR (ENSACAG00000006723) #14	PPIP5K2 (ENSACAG00000007146) #15	ENSACAG00000007110	ENSACAG00000036266	ENSACAG00000041027	PAM (ENSACAG00000006978) #17	ENSACAG00000029435 #18	ENSACAG00000041563	ENSACAG00000037754	ENSACAG00000036876	ENSACAG00000044416	ENSACAG00000042517	ENSACAG00000042764	ST8SIA4 (ENSACAG00000004472) #22	FAM174A (ENSACAG00000004457) #23	ENSACAG00000035514	ENSACAG00000037104	ENSACAG00000042885	ENSACAG00000041870
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00970000198259	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369.c #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00940000175373	ENSGT00850000132411 #36	ENSGT01070000253950	ENSGT00390000014160 #37
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00970000198259	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369.c #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008	ENSGT00850000132411 #36	ENSGT01070000253950	ENSGT00390000014160 #37
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00970000198259	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369.c #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00940000159524.k.a.a	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00950000185008	ENSGT00850000132411 #36	ENSGT01070000253950
Mainland tiger snake	MODERN SPECIES	1	WDR36 (ENSNSUG00000012545)	SLC25A46 (ENSNSUG00000012544)	MAN2A1 (ENSNSUG00000012542)	ENSNSUG00000012541	ENSNSUG00000012540	ENSNSUG00000012539	ENSNSUG00000012538	EFNA5 (ENSNSUG00000012522) #7	NUDT12 (ENSNSUG00000012521) #12	ENSNSUG00000012516 #13	MACIR (ENSNSUG00000012515) #14	PPIP5K2 (ENSNSUG00000012501) #15	PAM (ENSNSUG00000009542) #17	ENSNSUG00000009524	ENSNSUG00000009523 #18	ST8SIA4 (ENSNSUG00000009522) #22	FAM174A (ENSNSUG00000009521) #23	ENSNSUG00000009520	CHD1 (ENSNSUG00000007884) #25	ENSNSUG00000007883	RGMB (ENSNSUG00000007882) #27	ENSNSUG00000007881	RIOK2 (ENSNSUG00000007871) #28	LIX1 (ENSNSUG00000007870) #29	LNPEP (ENSNSUG00000007616) #30	ERAP1 (ENSNSUG00000007614) #31	CAST (ENSNSUG00000007613) #32	PCSK1 (ENSNSUG00000007611) #33	ELL2 (ENSNSUG00000007602) #34	ENSNSUG00000007437 #35	RHOBTB3 (ENSNSUG00000007435) #36
Eastern brown snake	MODERN SPECIES	2	SLC25A46 (ENSPTXG00000005816)	ENSPTXG00000005815	ENSPTXG00000005814	MAN2A1 (ENSPTXG00000005813)	ENSPTXG00000005812	FER (ENSPTXG00000005811)	FBXL17 (ENSPTXG00000005810)	EFNA5 (ENSPTXG00000005809) #7	ENSPTXG00000005808	NUDT12 (ENSPTXG00000005807) #12	ENSPTXG00000005806 #13	MACIR (ENSPTXG00000005805) #14	PPIP5K2 (ENSPTXG00000005803) #15	PAM (ENSPTXG00000005801) #17	ENSPTXG00000005798 #18	ST8SIA4 (ENSPTXG00000005795) #22	FAM174A (ENSPTXG00000005793) #23	CHD1 (ENSPTXG00000005201) #25	ENSPTXG00000005194	RGMB (ENSPTXG00000005192) #27	RIOK2 (ENSPTXG00000005191) #28	LIX1 (ENSPTXG00000005189) #29	LNPEP (ENSPTXG00000005186) #30	ERAP1 (ENSPTXG00000005183) #31	CAST (ENSPTXG00000005180) #32	PCSK1 (ENSPTXG00000005178) #33	ELL2 (ENSPTXG00000005177) #34	GLRX (ENSPTXG00000005176) #35	ENSPTXG00000005175	RHOBTB3 (ENSPTXG00000005174) #36	ENSPTXG00000005154
Indian cobra	MODERN SPECIES	1	ENSNNAG00000002399	CAMK4 (ENSNNAG00000002409)	WDR36 (ENSNNAG00000002421)	SLC25A46 (ENSNNAG00000002436)	MAN2A1 (ENSNNAG00000002451)	ENSNNAG00000002469	FER (ENSNNAG00000002506)	FBXL17 (ENSNNAG00000002621)	EFNA5 (ENSNNAG00000002630) #7	ENSNNAG00000002640	NUDT12 (ENSNNAG00000002647) #12	ENSNNAG00000002657 #13	PPIP5K2 (ENSNNAG00000002665) #15	PAM (ENSNNAG00000002676) #17	ENSNNAG00000002704 #18	ST8SIA4 (ENSNNAG00000002739) #22	FAM174A (ENSNNAG00000002748) #23	CHD1 (ENSNNAG00000003018) #25	RGMB (ENSNNAG00000007879) #27	RIOK2 (ENSNNAG00000007899) #28	LIX1 (ENSNNAG00000007933) #29	LNPEP (ENSNNAG00000007994) #30	ERAP1 (ENSNNAG00000008415) #31	CAST (ENSNNAG00000008548) #32	PCSK1 (ENSNNAG00000009055) #33	ELL2 (ENSNNAG00000009130) #34	ENSNNAG00000000574 #35	ENSNNAG00000000592	RHOBTB3 (ENSNNAG00000000611) #36	ENSNNAG00000000621	ENSNNAG00000000637
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00970000198259	ENSGT00960000190754	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00970000198259	ENSGT00960000190754	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT01070000253950
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00970000198259	ENSGT00960000190754	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670.a #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT01070000253950
Emydidae	ANCESTRAL SPECIES	7	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670.a #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00510000046406.g	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000014160 #37
painted turtle	MODERN SPECIES	2404	CCBE1 (ENSCPBG00000024187)	ENSCPBG00000024193	PDZD2 (ENSCPBG00000024199)	GOLPH3 (ENSCPBG00000024207)	MTMR12 (ENSCPBG00000024210)	ZFR (ENSCPBG00000024211)	SUB1 (ENSCPBG00000024218)	NUDT12 (ENSCPBG00000024224) #12	ENSCPBG00000024225 #13	MACIR (ENSCPBG00000024228) #14	PPIP5K2 (ENSCPBG00000024235) #15	ENSCPBG00000024249 #16	PAM (ENSCPBG00000024270) #17	ENSCPBG00000024289 #18	ENSCPBG00000024292	ST8SIA4 (ENSCPBG00000024293) #22	FAM174A (ENSCPBG00000024294) #23
Three-toed box turtle	MODERN SPECIES	29	ENSTMTG00000022026	MAN2A1 (ENSTMTG00000021999)	ENSTMTG00000021981	FER (ENSTMTG00000021969)	ENSTMTG00000021962	FBXL17 (ENSTMTG00000021955)	EFNA5 (ENSTMTG00000021951) #7	NUDT12 (ENSTMTG00000021942) #12	ENSTMTG00000021935 #13	ENSTMTG00000021933 #13	MACIR (ENSTMTG00000021929) #14	PPIP5K2 (ENSTMTG00000020075) #15	GIN1 (ENSTMTG00000019856) #16	PAM (ENSTMTG00000016928) #17	ENSTMTG00000016696 #18	ST8SIA4 (ENSTMTG00000016671) #22	FAM174A (ENSTMTG00000016657) #23	CHD1 (ENSTMTG00000015319) #25	RGMB (ENSTMTG00000015228) #27	RIOK2 (ENSTMTG00000015213) #28	LIX1 (ENSTMTG00000015201) #29	LNPEP (ENSTMTG00000015176) #30	ERAP2 (ENSTMTG00000014700)	ENSTMTG00000014608	ERAP1 (ENSTMTG00000014579) #31	CAST (ENSTMTG00000014499) #32	PCSK1 (ENSTMTG00000014407) #33	ELL2 (ENSTMTG00000014377) #34	GLRX (ENSTMTG00000014368) #35	RHOBTB3 (ENSTMTG00000014356) #36	ENSTMTG00000013955
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00390000015874	ENSGT00970000198259	ENSGT00960000190754	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973.e	ENSGT00940000157299 #7	ENSGT00940000157592.a #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670.a #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT01070000253950	ENSGT00390000014160 #37
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005001641	ENSGEVG00005001661	ENSGEVG00005001684	MAN2A1 (ENSGEVG00005001711)	ENSGEVG00005001747	FER (ENSGEVG00005001791)	FBXL17 (ENSGEVG00005001872)	EFNA5 (ENSGEVG00005001918) #7	ENSGEVG00005002001 #12	ENSGEVG00005002018 #13	MACIR (ENSGEVG00005002042) #14	PPIP5K2 (ENSGEVG00005002068) #15	GIN1 (ENSGEVG00005002115) #16	PAM (ENSGEVG00005002152) #17	ENSGEVG00005002242 #18	ST8SIA4 (ENSGEVG00005002261) #22	FAM174A (ENSGEVG00005002276) #23	CHD1 (ENSGEVG00005002897) #25	RGMB (ENSGEVG00005004466) #27	ENSGEVG00005004504	RIOK2 (ENSGEVG00005004523) #28	LIX1 (ENSGEVG00005004558) #29	LNPEP (ENSGEVG00005004599) #30	ENSGEVG00005004642	ENSGEVG00005004669	ERAP1 (ENSGEVG00005004726) #31	CAST (ENSGEVG00005004877) #32	PCSK1 (ENSGEVG00005005194) #33	ENSGEVG00005005350 #34	GLRX (ENSGEVG00005005370) #35	RHOBTB3 (ENSGEVG00005005390) #36
Abingdon island giant tortoise	MODERN SPECIES	188																ST8SIA4 (ENSCABG00000019705) #22	ENSCABG00000019703 #23
Chinese turtle	MODERN SPECIES	1503																ST8SIA4 (ENSPSIG00000013878) #22	ENSPSIG00000000420	CHD1 (ENSPSIG00000005807) #25	RGMB (ENSPSIG00000005663) #27	ENSPSIG00000005380	ENSPSIG00000000405
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000018225.B
Australian saltwater crocodile	MODERN SPECIES	29	SLC25A46 (ENSCPRG00005005989)	TMEM232 (ENSCPRG00005005985)	MAN2A1 (ENSCPRG00005005954)	ENSCPRG00005005933	FER (ENSCPRG00005005906)	FBXL17 (ENSCPRG00005005837)	EFNA5 (ENSCPRG00005005774) #7	ENSCPRG00005005720	NUDT12 (ENSCPRG00005005689) #12	ENSCPRG00005005676 #13	MACIR (ENSCPRG00005005660) #14	PPIP5K2 (ENSCPRG00005005586) #15	GIN1 (ENSCPRG00005005579) #16	PAM (ENSCPRG00005005486) #17	ENSCPRG00005005439 #18	ST8SIA4 (ENSCPRG00005005427) #22	FAM174A (ENSCPRG00005005416) #23	CHD1 (ENSCPRG00005005376) #25	ENSCPRG00005005368	RGMB (ENSCPRG00005005364) #27	RIOK2 (ENSCPRG00005005350) #28	LIX1 (ENSCPRG00005005345) #29	LNPEP (ENSCPRG00005005335) #30	ERAP2 (ENSCPRG00005004888)	ENSCPRG00005004648	ERAP1 (ENSCPRG00005003997) #31	ENSCPRG00005003930 #32	PCSK1 (ENSCPRG00005003911) #33	ENSCPRG00005003904	ELL2 (ENSCPRG00005003891) #34	GLRX (ENSCPRG00005003889) #35
Aves	ANCESTRAL SPECIES	4	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000162653	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068 #35	ENSGT00850000132411 #36	ENSGT00390000018225.B
Neognathae	ANCESTRAL SPECIES	19	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579.q.b #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000161591	ENSGT00940000156228.k	ENSGT00940000161010	ENSGT00390000011081	ENSGT00940000157347	ENSGT00390000017246	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395
Galloanserae	ANCESTRAL SPECIES	18	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973.h	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579.q.b #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000161591	ENSGT00940000156228.k	ENSGT00940000161010	ENSGT00390000011081	ENSGT00940000157347	ENSGT00390000017246	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C
Anatidae	ANCESTRAL SPECIES	12	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973.h	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579.q.b #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000161591	ENSGT00940000156228.k	ENSGT00940000161010	ENSGT00390000011081	ENSGT00940000157347	ENSGT00390000017246	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C
Pink-footed goose	MODERN SPECIES	314																ST8SIA4 (ENSABRG00000005074) #22	ENSABRG00000005062	FAM174A (ENSABRG00000005047) #23
Duck	MODERN SPECIES	4281	SLC25A46 (ENSAPLG00000012675)	MAN2A1 (ENSAPLG00000011352)	ENSAPLG00000011350	FER (ENSAPLG00000010838)	FBXL17 (ENSAPLG00000010940)	EFNA5 (ENSAPLG00000006250) #7	ENSAPLG00000022776	NUDT12 (ENSAPLG00000010451) #12	ENSAPLG00000010441 #13	MACIR (ENSAPLG00000029179) #14	PPIP5K2 (ENSAPLG00000010179) #15	GIN1 (ENSAPLG00000010085) #16	PAM (ENSAPLG00000009549) #17	ENSAPLG00000017691	ENSAPLG00000009323 #18	ST8SIA4 (ENSAPLG00000003725) #22	FAM174A (ENSAPLG00000000778) #23	CHD1 (ENSAPLG00000009965) #25	RGMB (ENSAPLG00000011165) #27	LIX1 (ENSAPLG00000009297) #29	LNPEP (ENSAPLG00000014098) #30	SHB (ENSAPLG00000012151)	RNF38 (ENSAPLG00000005157)	TRIM14 (ENSAPLG00000005302)	NANS (ENSAPLG00000005457)	CLTA (ENSAPLG00000005540)	GNE (ENSAPLG00000005602)	ENSAPLG00000020781	PCGF3 (ENSAPLG00000012623)	SLC49A3 (ENSAPLG00000008297)	ENSAPLG00000007724
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973.h	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579.q.b #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000161591	ENSGT00940000156228.k	ENSGT00940000161010	ENSGT00390000011081	ENSGT00940000157347	ENSGT00390000017246	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C
Japanese quail	MODERN SPECIES	699	WDR36 (ENSCJPG00005009636)	SLC25A46 (ENSCJPG00005009637)	MAN2A1 (ENSCJPG00005009642)	ENSCJPG00005009646	FER (ENSCJPG00005009647)	FBXL17 (ENSCJPG00005009649)	EFNA5 (ENSCJPG00005009653) #7	ENSCJPG00005009660	NUDT12 (ENSCJPG00005009661) #12	ENSCJPG00005009662	PPIP5K2 (ENSCJPG00005009665) #15	GIN1 (ENSCJPG00005009666) #16	PAM (ENSCJPG00005009667) #17	ENSCJPG00005009668	ENSCJPG00005009669 #18	ST8SIA4 (ENSCJPG00005009671) #22	FAM174A (ENSCJPG00005009672) #23	CHD1 (ENSCJPG00005009679) #25	RGMB (ENSCJPG00005011866) #27	RIOK2 (ENSCJPG00005011868) #28	LIX1 (ENSCJPG00005011871) #29	LNPEP (ENSCJPG00005011873) #30	SHB (ENSCJPG00005012039)	RNF38 (ENSCJPG00005012042)	TRIM14 (ENSCJPG00005012043)	NANS (ENSCJPG00005012044)	ENSCJPG00005012045	CLTA (ENSCJPG00005012048)	GNE (ENSCJPG00005012049)	ENSCJPG00005012053	ENSCJPG00005012056
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973.g	ENSGT00940000156973.h	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579.q.b #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000161591	ENSGT00940000156228.k	ENSGT00940000161010	ENSGT00390000011081	ENSGT00940000157347	ENSGT00390000017246	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C
Chicken	MODERN SPECIES	131	WDR36 (ENSGALG00010010302)	SLC25A46 (ENSGALG00010009617)	MAN2A1 (ENSGALG00010009762)	ENSGALG00010009811	FER (ENSGALG00010009663)	ENSGALG00010010215	FBXL17 (ENSGALG00010010257)	EFNA5 (ENSGALG00010010266) #7	NUDT12 (ENSGALG00010008522) #12	ENSGALG00010008528 #13	CZH5ORF30 (ENSGALG00010008373) #14	PPIP5K2 (ENSGALG00010008424) #15	GIN1 (ENSGALG00010008450) #16	PAM (ENSGALG00010008497) #17	SLCO4C1 (ENSGALG00010012226) #18	ST8SIA4 (ENSGALG00010011935) #22	ENSGALG00010011942	FAM174A (ENSGALG00010012532) #23	ENSGALG00010012238	CHD1 (ENSGALG00010012470) #25	RGMB (ENSGALG00010012903) #27	RIOK2 (ENSGALG00010011881) #28	LIX1 (ENSGALG00010011893) #29	LNPEP (ENSGALG00010013246) #30	SHB (ENSGALG00010013253)	RNF38 (ENSGALG00010012095)	TRIM14 (ENSGALG00010012240)	NANS (ENSGALG00010012250)	CLTA (ENSGALG00010013183)	GNE (ENSGALG00010013225)	CPLX1 (ENSGALG00010012442)
Turkey	MODERN SPECIES	1299	SLC25A46 (ENSMGAG00000006808)	ENSMGAG00000020954	ENSMGAG00000016502	FER (ENSMGAG00000006831)	EFNA5 (ENSMGAG00000021354) #7	ENSMGAG00000019118	NUDT12 (ENSMGAG00000018560) #12	ENSMGAG00000021289 #13	ENSMGAG00000022213 #13	MACIR (ENSMGAG00000016072) #14	PPIP5K2 (ENSMGAG00000006847) #15	PAM (ENSMGAG00000006925) #17	GIN1 (ENSMGAG00000006908) #16	ENSMGAG00000022972 #18	ENSMGAG00000019682	ST8SIA4 (ENSMGAG00000006539) #22	ENSMGAG00000019740	ENSMGAG00000004029 #25	ENSMGAG00000008369 #25	ENSMGAG00000018336 #25	ENSMGAG00000019462	RGMB (ENSMGAG00000019871) #27	ENSMGAG00000007011 #30	LIX1 (ENSMGAG00000007007) #29	RIOK2 (ENSMGAG00000006986) #28	ENSMGAG00000007069	ENSMGAG00000007075	ENSMGAG00000018104	ENSMGAG00000007056	ENSMGAG00000007040	ENSMGAG00000007099
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579.q.b #25	ENSGT00410000028909 #26	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00940000157902 #30	ENSGT00940000161591	ENSGT00940000156228.k	ENSGT00940000161010	ENSGT00390000011081	ENSGT00940000157347	ENSGT00390000017246	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C
Passeriformes	ANCESTRAL SPECIES	38	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT00550000074816.B	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805	ENSGT00390000017130	ENSGT00940000156165.k.b	ENSGT01050000244942.b.a.a	ENSGT00940000154609
Great tit	MODERN SPECIES	642	WDR36 (ENSPMJG00000012722)	SLC25A46 (ENSPMJG00000012720)	MAN2A1 (ENSPMJG00000012715)	ENSPMJG00000012714	FER (ENSPMJG00000012713)	FBXL17 (ENSPMJG00000012712)	EFNA5 (ENSPMJG00000012709) #7	ENSPMJG00000012703	ENSPMJG00000012698 #18	PAM (ENSPMJG00000010364) #17	GIN1 (ENSPMJG00000010266) #16	PPIP5K2 (ENSPMJG00000009282) #15	MACIR (ENSPMJG00000009268) #14	ENSPMJG00000009267 #13	NUDT12 (ENSPMJG00000009245) #12	ST8SIA4 (ENSPMJG00000009210) #22	FAM174A (ENSPMJG00000009154) #23	ENSPMJG00000009149	ENSPMJG00000009146	ENTREP1 (ENSPMJG00000009142)	APBA1 (ENSPMJG00000009141)	PTAR1 (ENSPMJG00000009121)	MAMDC2 (ENSPMJG00000009109)	SMC5 (ENSPMJG00000009101)	KLF9 (ENSPMJG00000009096)	TRPM3 (ENSPMJG00000009078)	CEMIP2 (ENSPMJG00000009052)	ABHD17B (ENSPMJG00000009042)	C9orf85 (ENSPMJG00000009041)	GDA (ENSPMJG00000009039)	ENSPMJG00000009038
Passeriformes_d	ANCESTRAL SPECIES	36	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782.b #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT00550000074816.B	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805	ENSGT00390000017130	ENSGT00940000156165.k.b	ENSGT01050000244942.b.a.a	ENSGT00940000154609
Flycatcher	MODERN SPECIES	561	ALDH1A1 (ENSFALG00000012820)	ANXA1 (ENSFALG00000012793)	RORB (ENSFALG00000012763)	TRPM6 (ENSFALG00000012713)	ENSFALG00000027226	NMRK1 (ENSFALG00000012662)	OSTF1 (ENSFALG00000012650)	ZNF462 (ENSFALG00000002876)	TMEM38B (ENSFALG00000002884)	TAL2 (ENSFALG00000015243)	FKTN (ENSFALG00000002894)	FSD1L (ENSFALG00000002900)	ENSFALG00000002892	ENSFALG00000002924 #32	ENSFALG00000002956 #33	ENSFALG00000002961 #22	ENSFALG00000023769	ENSFALG00000000833	ENSFALG00000000816	CETN3 (ENSFALG00000009026)	LYSMD3 (ENSFALG00000026089)	ADGRV1 (ENSFALG00000009043)	ARRDC3 (ENSFALG00000009068)	NR2F1 (ENSFALG00000025548)	FAM172A (ENSFALG00000009072)	KIAA0825 (ENSFALG00000009074)	SLF1 (ENSFALG00000009078)	MCTP1 (ENSFALG00000009081)	SKIC3 (ENSFALG00000009093)	ARSK (ENSFALG00000009095)	ENSFALG00000009108
Passeriformes_g	ANCESTRAL SPECIES	40	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782.b #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT00550000074816.B	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805	ENSGT00390000017130	ENSGT00940000156165.k.b	ENSGT01050000244942.b.a.a	ENSGT00940000154609
Passeroidea	ANCESTRAL SPECIES	39	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782.b #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT00550000074816.B	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805	ENSGT00390000017130	ENSGT00940000156165.k.b	ENSGT01050000244942.b.a.a	ENSGT00940000154609
Zebra finch	MODERN SPECIES	104	ENSTGUG00000029206	SLC25A46 (ENSTGUG00000024771)	MAN2A1 (ENSTGUG00000000974)	ENSTGUG00000000970	FER (ENSTGUG00000000963)	FBXL17 (ENSTGUG00000000961)	EFNA5 (ENSTGUG00000023724) #7	ENSTGUG00000027192	NUDT12 (ENSTGUG00000000953) #12	ENSTGUG00000000949 #13	C5orf30 (ENSTGUG00000020235) #14	PPIP5K2 (ENSTGUG00000000931) #15	GIN1 (ENSTGUG00000000926) #16	PAM (ENSTGUG00000000903) #17	ENSTGUG00000021013 #18	ST8SIA4 (ENSTGUG00000000894) #22	FAM174A (ENSTGUG00000000892) #23	ENSTGUG00000027212	ENSTGUG00000026933	ENSTGUG00000015726	ENSTGUG00000025637	ENSTGUG00000000644	PLPPR1 (ENSTGUG00000000645)	ENSTGUG00000028184	ALDOB (ENSTGUG00000000650)	PGAP4 (ENSTGUG00000024915)	RNF20 (ENSTGUG00000017517)	ENSTGUG00000022772	GRIN3A (ENSTGUG00000000661)	ENSTGUG00000020002	ENSTGUG00000000665
Common canary	MODERN SPECIES	52					ENSSCAG00000017327	EFNA5 (ENSSCAG00000017328) #7	FBXL17 (ENSSCAG00000017330)	NUDT12 (ENSSCAG00000017331) #12	ENSSCAG00000017332 #13	ENSSCAG00000017334 #14	PPIP5K2 (ENSSCAG00000017342) #15	GIN1 (ENSSCAG00000017344) #16	PAM (ENSSCAG00000017345) #17	ENSSCAG00000017347 #18	ENSSCAG00000017348	ST8SIA4 (ENSSCAG00000017349) #22	ENSSCAG00000017351	ENTREP1 (ENSSCAG00000017352)	APBA1 (ENSSCAG00000000222)	PTAR1 (ENSSCAG00000000265)	MAMDC2 (ENSSCAG00000000357)	SMC5 (ENSSCAG00000000588)	TRPM3 (ENSSCAG00000000666)	CEMIP2 (ENSSCAG00000000845)	ABHD17B (ENSSCAG00000000863)	C9orf85 (ENSSCAG00000000874)	GDA (ENSSCAG00000000897)	ENSSCAG00000000929	TMC1 (ENSSCAG00000000943)	ALDH1A1 (ENSSCAG00000000970)	ANXA1 (ENSSCAG00000000984)
Medium ground finch	MODERN SPECIES	171							PCSK1 (ENSGFOG00000014691) #33	ENSGFOG00000014693 #32	FSD1L (ENSGFOG00000014699)	FKTN (ENSGFOG00000014704)	TAL2 (ENSGFOG00000014709)	TMEM38B (ENSGFOG00000014711)	ZNF462 (ENSGFOG00000014713)	RAD23B (ENSGFOG00000014715)	KLF4 (ENSGFOG00000014716)	ST8SIA4 (ENSGFOG00000014718) #22
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000160670 #16	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579.q.b #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00940000157902 #30	ENSGT00940000161591	ENSGT00940000156228.k	ENSGT00940000161010	ENSGT00390000011081	ENSGT00940000157347	ENSGT00390000017246	ENSGT00950000182938.b.b.b.a	ENSGT00940000158395	ENSGT01030000234625.C	ENSGT00940000154617.A
Kakapo	MODERN SPECIES	19	CAMK4 (ENSSHBG00005003669)	WDR36 (ENSSHBG00005003647)	SLC25A46 (ENSSHBG00005003630)	MAN2A1 (ENSSHBG00005003434)	ENSSHBG00005003242	FER (ENSSHBG00005003161)	FBXL17 (ENSSHBG00005003118)	EFNA5 (ENSSHBG00005003103) #7	NUDT12 (ENSSHBG00005003091) #12	ENSSHBG00005003068 #13	MACIR (ENSSHBG00005003056) #14	PPIP5K2 (ENSSHBG00005002951) #15	GIN1 (ENSSHBG00005002908) #16	PAM (ENSSHBG00005002888) #17	ENSSHBG00005002854 #18	ST8SIA4 (ENSSHBG00005002839) #22	FAM174A (ENSSHBG00005002794) #23	LNPEP (ENSSHBG00005002754) #30	SHB (ENSSHBG00005002732)	ENSSHBG00005002707	NANS (ENSSHBG00005002674)	CLTA (ENSSHBG00005002638)	GNE (ENSSHBG00005002604)	ENSSHBG00005002587	ENSSHBG00005002541	RAD17 (ENSSHBG00005002493)	AK6 (ENSSHBG00005002469)	CCDC125 (ENSSHBG00005002431)	ZFYVE16 (ENSSHBG00005002389)	ENSSHBG00005002372	FAM151B (ENSSHBG00005002341)
Golden eagle	MODERN SPECIES	91	SLC25A46 (ENSACCG00020011765)	MAN2A1 (ENSACCG00020011803)	ENSACCG00020011865	FER (ENSACCG00020011944)	FBXL17 (ENSACCG00020012011)	EFNA5 (ENSACCG00020012025) #7	ENSACCG00020012048	NUDT12 (ENSACCG00020012075) #12	ENSACCG00020012182 #13	MACIR (ENSACCG00020012224) #14	PPIP5K2 (ENSACCG00020012366) #15	GIN1 (ENSACCG00020012593) #16	PAM (ENSACCG00020012656) #17	ENSACCG00020012779 #18	ENSACCG00020012804	ST8SIA4 (ENSACCG00020012814) #22	FAM174A (ENSACCG00020012843) #23	ENSACCG00020012869	ENSACCG00020012890	CHD1 (ENSACCG00020014113) #25	RGMB (ENSACCG00020015073) #27	ENSACCG00020015088	LNPEP (ENSACCG00020015108) #30	SHB (ENSACCG00020015123)	RNF38 (ENSACCG00020015158)	TRIM14 (ENSACCG00020015197)	NANS (ENSACCG00020015210)	CLTA (ENSACCG00020015257)	GNE (ENSACCG00020015310)	CPLX1 (ENSACCG00020015344)	PCGF3 (ENSACCG00020015368)
African ostrich	MODERN SPECIES	395						FER (ENSSCUG00000006135)	FBXL17 (ENSSCUG00000006130)	EFNA5 (ENSSCUG00000006126) #7	NUDT12 (ENSSCUG00000006109) #12	ENSSCUG00000006107 #13	MACIR (ENSSCUG00000006105) #14	PPIP5K2 (ENSSCUG00000006094) #15	GIN1 (ENSSCUG00000006087) #16	PAM (ENSSCUG00000006081) #17	ENSSCUG00000006074 #18	ST8SIA4 (ENSSCUG00000006067) #22
Anura	ANCESTRAL SPECIES	9	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997	ENSGT00940000156973.a	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00950000183112.b.a.b #27	ENSGT00390000003255 #28	ENSGT00390000005869.b #29	ENSGT00940000157902 #30	ENSGT00940000159086 #31	ENSGT00390000002993 #32	ENSGT00940000157385 #33	ENSGT00940000154828 #34	ENSGT00900000141068.a #35	ENSGT00940000165790	ENSGT00850000132411 #36	ENSGT00390000018225.B	ENSGT01050000244841.B.a.a
Frog	MODERN SPECIES		man2a1 (ENSXETG00000026530)	b3galt9 (ENSXETG00000021269)	fer (ENSXETG00000021270)	FBXL17 (ENSXETG00000021273)	efna5 (ENSXETG00000014869) #7	ENSXETG00000045278	ENSXETG00000038555	nudt12 (ENSXETG00000017459) #12	ENSXETG00000017458 #13	ENSXETG00000042573	macir (ENSXETG00000023861) #14	ppip5k2 (ENSXETG00000023862) #15	pam (ENSXETG00000023863) #17	slco4c1 (ENSXETG00000023865) #18	ENSXETG00000042314	st8sia4 (ENSXETG00000035873) #22	fam174a (ENSXETG00000026245) #23	ENSXETG00000031080	chd1 (ENSXETG00000023875) #25	ENSXETG00000039227	rgmb (ENSXETG00000023880) #27	riok2 (ENSXETG00000013194) #28	lix1 (ENSXETG00000013196) #29	lnpep (ENSXETG00000013199) #30	ENSXETG00000042684	erap1 (ENSXETG00000013225) #31	cast (ENSXETG00000013262) #32	pcsk1 (ENSXETG00000013276) #33	ENSXETG00000044209	ell2 (ENSXETG00000013296) #34	glrx (ENSXETG00000026267) #35
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000006739	ENSLLEG00000006670	ENSLLEG00000006633	NUDT12 (ENSLLEG00000006591) #12	ENSLLEG00000006565 #13	MACIR (ENSLLEG00000006555) #14	PPIP5K2 (ENSLLEG00000005281) #15	ENSLLEG00000005156	ENSLLEG00000005147	ENSLLEG00000005141	PAM (ENSLLEG00000004959) #17	ENSLLEG00000004902 #18	ENSLLEG00000004894	ENSLLEG00000004889	ENSLLEG00000004883	ST8SIA4 (ENSLLEG00000004870) #22	FAM174A (ENSLLEG00000004855) #23	ENSLLEG00000004848	ENSLLEG00000004840	CHD1 (ENSLLEG00000004744) #25	ENSLLEG00000004726	RGMB (ENSLLEG00000004716) #27	ENSLLEG00000004705	ENSLLEG00000004698	ENSLLEG00000004691	RIOK2 (ENSLLEG00000004672) #28	LIX1 (ENSLLEG00000004647) #29	LNPEP (ENSLLEG00000004622) #30	ERAP1 (ENSLLEG00000004562) #31	ENSLLEG00000004512 #32	PCSK1 (ENSLLEG00000004484) #33
Coelacanth	MODERN SPECIES	3552																ST8SIA4 (ENSLACG00000001174) #22
Actinopterygii	ANCESTRAL SPECIES	11	ENSGT00940000161328	ENSGT00940000163752	ENSGT00940000160266	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950	ENSGT00510000048363	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626	ENSGT00940000158463	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00940000160535
Neopterygii	ANCESTRAL SPECIES	16	ENSGT00940000163752	ENSGT00940000160266	ENSGT00940000160237	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950	ENSGT00510000048363	ENSGT00940000156973	ENSGT00940000157299 #7	ENSGT00940000157592 #12	ENSGT00530000064469 #13	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01080000257410.D #18	ENSGT01030000234535.F.b #22	ENSGT00730000111385 #23	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626	ENSGT00940000158463	ENSGT00390000018226	ENSGT00970000193421.C.a	ENSGT00940000160535
Osteoglossocephalai	ANCESTRAL SPECIES	94	ENSGT00940000154451	ENSGT00390000017923	ENSGT00940000158245	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00390000004511.c.a	ENSGT01030000234607.A.a.b.b	ENSGT00940000156114.c	ENSGT00940000155135	ENSGT00940000158503	ENSGT00940000159579
Osteoglossiformes	ANCESTRAL SPECIES	39													ENSGT00390000005782.c #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00940000156893	ENSGT00390000002049.d	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000159608	ENSGT00940000155603.A.b.d	ENSGT00940000157507	ENSGT00390000005646	ENSGT00940000157357.f
Asian bonytongue	MODERN SPECIES	21	lyrm7 (ENSSFOG00015007756)	cdc42se2 (ENSSFOG00015025857)	sptlc1 (ENSSFOG00015007692)	ENSSFOG00015007676	ENSSFOG00015028257	ROR2 (ENSSFOG00015007632)	nfil3 (ENSSFOG00015007593)	auh (ENSSFOG00015007576)	syk (ENSSFOG00015007492)	DIRAS2 (ENSSFOG00015025121)	ENSSFOG00015007432 #13	LYZ (ENSSFOG00015007393)	macir (ENSSFOG00015033101) #14	PPIP5K2 (ENSSFOG00015007301) #15	PAM (ENSSFOG00015007243) #17	st8sia4 (ENSSFOG00015029746) #22	chd1 (ENSSFOG00015007161) #25	reep5 (ENSSFOG00015007125)	dcp2 (ENSSFOG00015026653)	ENSSFOG00015007058	zgc:114200 (ENSSFOG00015007033)	tpm2 (ENSSFOG00015027799)	tln1 (ENSSFOG00015006768)	hmgcs1 (ENSSFOG00015006716)	MAP3K1 (ENSSFOG00015006667)	ANKRD55 (ENSSFOG00015006619)	IL6ST (ENSSFOG00015006588)	ENSSFOG00015006549	ddx4 (ENSSFOG00015006531)	slc38a9 (ENSSFOG00015006467)	ENSSFOG00015006403
P. kingsleyae	MODERN SPECIES	531													macir (ENSPKIG00000024934) #14	PPIP5K2 (ENSPKIG00000024863) #15	PAM (ENSPKIG00000024759) #17	st8sia4 (ENSPKIG00000024739) #22	chd1 (ENSPKIG00000024719) #25	reep5 (ENSPKIG00000024686)	dcp2 (ENSPKIG00000024658)	ENSPKIG00000024631	zgc:114200 (ENSPKIG00000024614)
Clupeocephala	ANCESTRAL SPECIES	4	ENSGT00940000154451	ENSGT00390000017923	ENSGT00940000158245	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT01030000234607.A.a.b.b	ENSGT00940000154078.b.a	ENSGT00940000169304	ENSGT00970000195658	ENSGT00390000017193	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000158503	ENSGT00940000159579
Euteleosteomorpha	ANCESTRAL SPECIES	57	ENSGT01050000244857.C.b	ENSGT00940000154451	ENSGT00390000017923	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT01030000234607.A.a.b.b	ENSGT00940000154078.b.a	ENSGT00390000017193	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000158503	ENSGT00940000159579	ENSGT00390000008519.kc.b	ENSGT00950000183161.a.b
Protacanthopterygii	ANCESTRAL SPECIES	17	ENSGT00390000017923	ENSGT00940000158245	ENSGT01070000253760.b.b.a.a.c.b.d.a.b	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00390000002049.d	ENSGT01030000234542.b.b.a.a.b	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a	ENSGT00940000155603.A.b.d	ENSGT00940000157507	ENSGT00390000005646	ENSGT00940000157357.f
Salmoninae	ANCESTRAL SPECIES	132	ENSGT00390000017923	ENSGT00940000158245.ic	ENSGT01070000253760.b.b.a.a.c.b.d.a.b	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00730000111912.A.a.a.a.a.b	ENSGT00940000157873	ENSGT00390000018878	ENSGT00940000156893.ab	ENSGT00390000002049.d	ENSGT00970000193390.c.a.a.b.b.b.b	ENSGT01030000234542.b.b.a.a.b	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT01070000253760.b.b.a.a.c.b.d.b	ENSGT00940000159154.i	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a.b
Huchen	MODERN SPECIES	575															PAM (ENSHHUG00000005575) #17	st8sia4 (ENSHHUG00000005644) #22	CHD1 (ENSHHUG00000005656) #25	ENSHHUG00000006130	reep5 (ENSHHUG00000006159)	dcp2 (ENSHHUG00000006205)	ENSHHUG00000006214	zgc:114200 (ENSHHUG00000006222)	ENSHHUG00000006230	ENSHHUG00000006249	tln1 (ENSHHUG00000007464)	hmgcs1 (ENSHHUG00000009239)	ENSHHUG00000009310	MAP3K1 (ENSHHUG00000009340)
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000154451	ENSGT00390000017923	ENSGT00940000158245.ic	ENSGT01070000253760.b.b.a.a.c.b.d.a.b	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00730000111912.A.a.a.a.a.b	ENSGT00940000157873	ENSGT00390000018878	ENSGT00940000156893.ab	ENSGT00390000002049.d	ENSGT00970000193390.c.a.a.b.b.b.b	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT01070000253760.b.b.a.a.c.b.d.b	ENSGT00940000159154.i	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a.b
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00390000017923	ENSGT00940000158245.ic	ENSGT01070000253760.b.b.a.a.c.b.d.a.b	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01060000249336.b.a	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00940000156893.ab	ENSGT00390000002049.d	ENSGT00970000193390.c.a.a.b.b.b.b	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT01070000253760.b.b.a.a.c.b.d.b	ENSGT00940000159154.i	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a.b	ENSGT00940000155603.A.b.d
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00940000154451	ENSGT00390000017923	ENSGT00940000158245.ic	ENSGT01070000253760.b.b.a.a.c.b.d.a.b	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01060000249336.b.a	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00940000156893.ab	ENSGT00390000002049.d	ENSGT00970000193390.c.a.a.b.b.b.b	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT01070000253760.b.b.a.a.c.b.d.b	ENSGT00940000159154.i	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a.b	ENSGT00940000155603.A.b.d
Chinook salmon	MODERN SPECIES	12	lyrm7 (ENSOTSG00005041716)	cdc42se2 (ENSOTSG00005041718)	ENSOTSG00005041720	sptlc1 (ENSOTSG00005041724)	mvb12ba (ENSOTSG00005041743)	ROR2 (ENSOTSG00005041744)	nfil3 (ENSOTSG00005041745)	auh (ENSOTSG00005041746)	syk (ENSOTSG00005041748)	DIRAS2 (ENSOTSG00005041750)	ENSOTSG00005041751 #13	LYZ (ENSOTSG00005041752)	PPIP5K2 (ENSOTSG00005034622) #15	PAM (ENSOTSG00005043537) #17	ENSOTSG00005043568	st8sia4 (ENSOTSG00005043569) #22	ENSOTSG00005043570	chd1 (ENSOTSG00005043592) #25	reep5 (ENSOTSG00005045361)	dcp2 (ENSOTSG00005045362)	ENSOTSG00005045363	zgc:114200 (ENSOTSG00005045364)	ENSOTSG00005045365	tpm2 (ENSOTSG00005045366)	tln1 (ENSOTSG00005045623)	hmgcs1 (ENSOTSG00005046187)	ENSOTSG00005046190	PLK2 (ENSOTSG00005046191)	ENSOTSG00005046193	ENSOTSG00005046194	ENSOTSG00005046195
Coho salmon	MODERN SPECIES	15	HINT1 (ENSOKIG00005006214)	lyrm7 (ENSOKIG00005006184)	cdc42se2 (ENSOKIG00005006157)	ENSOKIG00005006124	sptlc1 (ENSOKIG00005050910)	ROR2 (ENSOKIG00005050902)	ENSOKIG00005050901	auh (ENSOKIG00005050899)	DIRAS2 (ENSOKIG00005050896)	syk (ENSOKIG00005050895)	ENSOKIG00005050891 #13	LYZ (ENSOKIG00005050890)	PPIP5K2 (ENSOKIG00005050834) #15	ENSOKIG00005050785	PAM (ENSOKIG00005050775) #17	st8sia4 (ENSOKIG00005050763) #22	ENSOKIG00005050761	chd1 (ENSOKIG00005050502) #25	reep5 (ENSOKIG00005050321)	dcp2 (ENSOKIG00005050306)	ENSOKIG00005050296	zgc:114200 (ENSOKIG00005050294)	ENSOKIG00005050287	tpm2 (ENSOKIG00005050201)	tln1 (ENSOKIG00005049536)	hmgcs1 (ENSOKIG00005049242)	ENSOKIG00005049222	MAP3K1 (ENSOKIG00005049180)	ENSOKIG00005049167	ANKRD55 (ENSOKIG00005049156)	ENSOKIG00005049132
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000002682	sptlc1 (ENSOMYG00000002914)	ENSOMYG00000052433	ROR2 (ENSOMYG00000003269)	ENSOMYG00000003291	nfil3 (ENSOMYG00000003296)	auh (ENSOMYG00000003309)	syk (ENSOMYG00000003345)	DIRAS2 (ENSOMYG00000003364)	ENSOMYG00000003394 #13	ENSOMYG00000003648	lyz2 (ENSOMYG00000065270)	PPIP5K2 (ENSOMYG00000004223) #15	PAM (ENSOMYG00000004560) #17	ENSOMYG00000004586	st8sia4 (ENSOMYG00000004601) #22	ENSOMYG00000004615	chd1 (ENSOMYG00000006829) #25	reep5 (ENSOMYG00000009547)	ENSOMYG00000063648	dcp2 (ENSOMYG00000009612)	ENSOMYG00000009707	zgc:114200 (ENSOMYG00000009742)	ENSOMYG00000009756	tpm2 (ENSOMYG00000009972)	tln1 (ENSOMYG00000011710)	ENSOMYG00000057863	hmgcs1 (ENSOMYG00000031345)	ENSOMYG00000031372	MAP3K1 (ENSOMYG00000031418)	ANKRD55 (ENSOMYG00000031557)
Salmo	ANCESTRAL SPECIES		ENSGT00390000017923	ENSGT00940000158245.ic	ENSGT01070000253760.b.b.a.a.c.b.d.a.b	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00730000111912.A.a.a.a.a.b	ENSGT00940000157873	ENSGT00390000018878	ENSGT00940000156893.ab	ENSGT00390000002049.d	ENSGT00970000193390.c.a.a.b.b.b.b	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT01070000253760.b.b.a.a.c.b.d.b	ENSGT00940000159154.i	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a.b
Atlantic salmon	MODERN SPECIES		cdc42se2 (ENSSSAG00000081817)	ENSSSAG00000076744	sptlc1 (ENSSSAG00000076695)	ROR2 (ENSSSAG00000088840)	ENSSSAG00000090925	nfil3 (ENSSSAG00000076675)	auh (ENSSSAG00000076654)	syk (ENSSSAG00000076619)	diras2 (ENSSSAG00000107306)	ENSSSAG00000076594 #13	LYSC2 (ENSSSAG00000076584)	MACIR (ENSSSAG00000082379) #14	ENSSSAG00000112027	ppip5k2 (ENSSSAG00000073972) #15	PAM (ENSSSAG00000073863) #17	st8sia4 (ENSSSAG00000073858) #22	ENSSSAG00000073854	chd1 (ENSSSAG00000069446) #25	ENSSSAG00000102281	reep5 (ENSSSAG00000069320)	dcp2 (ENSSSAG00000069304)	ENSSSAG00000090744	zgc:114200 (ENSSSAG00000084885)	ENSSSAG00000101287	tpm2 (ENSSSAG00000069078)	tln1 (ENSSSAG00000063331)	hmgcs1 (ENSSSAG00000063210)	ENSSSAG00000086906	ENSSSAG00000063197	MAP3K1 (ENSSSAG00000063014)	ENSSSAG00000121380
River trout	MODERN SPECIES	15	chsy3 (ENSSTUG00000025806)	HINT1 (ENSSTUG00000025800)	lyrm7 (ENSSTUG00000025789)	cdc42se2 (ENSSTUG00000025778)	ENSSTUG00000025772	sptlc1 (ENSSTUG00000025592)	ROR2 (ENSSTUG00000025578)	nfil3 (ENSSTUG00000025566)	auh (ENSSTUG00000025333)	DIRAS2 (ENSSTUG00000025327)	syk (ENSSTUG00000025230)	ENSSTUG00000025212 #13	LYZ (ENSSTUG00000025205)	PPIP5K2 (ENSSTUG00000022016) #15	PAM (ENSSTUG00000021592) #17	st8sia4 (ENSSTUG00000021563) #22	ENSSTUG00000021556	chd1 (ENSSTUG00000018316) #25	ENSSTUG00000018236	reep5 (ENSSTUG00000018212)	dcp2 (ENSSTUG00000018167)	ENSSTUG00000018158	zgc:114200 (ENSSTUG00000018148)	ENSSTUG00000018138	tpm2 (ENSSTUG00000017913)	tln1 (ENSSTUG00000013573)	hmgcs1 (ENSSTUG00000013271)	ENSSTUG00000013253	MAP3K1 (ENSSTUG00000012919)	ANKRD55 (ENSSTUG00000012895)	il6st (ENSSTUG00000012834)
Northern pike	MODERN SPECIES	22	chsy3 (ENSELUG00000016460)	lyrm7 (ENSELUG00000016607)	ENSELUG00000026359	hint1 (ENSELUG00000016515)	cdc42se2 (ENSELUG00000016635)	zgc:173709 (ENSELUG00000016671)	sptlc1 (ENSELUG00000016744)	ROR2 (ENSELUG00000016826)	nfil3 (ENSELUG00000016858)	auh (ENSELUG00000016935)	syk (ENSELUG00000016990)	DIRAS2 (ENSELUG00000017020)	ENSELUG00000017059 #13	LYZ (ENSELUG00000017112)	PAM (ENSELUG00000017536) #17	st8sia4 (ENSELUG00000017552) #22	ENSELUG00000017568	chd1 (ENSELUG00000017677) #25	tmem179aa (ENSELUG00000000705)	prph2lb (ENSELUG00000000711)	ckbb (ENSELUG00000017747)	mark3b (ENSELUG00000017834)	eif5 (ENSELUG00000017892)	tnfaip2a (ENSELUG00000017931)	si:dkeyp-72h1.1 (ENSELUG00000017949)	cdc42bpb (ENSELUG00000018094)	cyp46a1.3 (ENSELUG00000018130)	ccdc85cb (ENSELUG00000018846)	ccnk (ENSELUG00000018878)	ENSELUG00000018914	papola (ENSELUG00000018972)
Otomorpha	ANCESTRAL SPECIES	84	ENSGT01050000244857.C.b	ENSGT00390000017923	ENSGT00940000158245	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT01030000234542.b.a.a.b.a.b	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a	ENSGT00940000155603.A.b.d	ENSGT00940000157507	ENSGT00390000005646	ENSGT00940000157357.f	ENSGT00940000156591
Otophysi	ANCESTRAL SPECIES	181		ENSGT00390000017923	ENSGT00940000158245	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00390000018360.a	ENSGT00940000156893	ENSGT00390000002049.d	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a	ENSGT00940000155603.A.b.d	ENSGT00940000157507
Characiphysae	ANCESTRAL SPECIES	46		ENSGT00390000017923	ENSGT00940000158245	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00390000018360.a	ENSGT00940000156893	ENSGT00390000002049.d	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a	ENSGT00940000155603.A.b.d	ENSGT00940000157507
Characiphysae_b	ANCESTRAL SPECIES	19		ENSGT00390000017923	ENSGT00940000158245	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00390000018360.a	ENSGT00940000156893	ENSGT00390000002049.d	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a	ENSGT00940000155603.A.b.d	ENSGT00940000157507
Characoidei	ANCESTRAL SPECIES	11		ENSGT00390000017923	ENSGT00940000158245	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832.eb.b.a	ENSGT00940000153832.eb.a	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00390000002049.d	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a	ENSGT00940000155603.A.b.d	ENSGT00940000157507	ENSGT00390000005646	ENSGT00940000157357.f
Red-bellied piranha	MODERN SPECIES	49	cdc42se2 (ENSPNAG00000019991)	sptlc1 (ENSPNAG00000020033)	ROR2 (ENSPNAG00000020081)	nfil3 (ENSPNAG00000005990)	auh (ENSPNAG00000020100)	syk (ENSPNAG00000020151)	DIRAS2 (ENSPNAG00000020169)	ENSPNAG00000020192 #13	ENSPNAG00000020238	ENSPNAG00000020256	ENSPNAG00000020276	LYZ (ENSPNAG00000020289)	macir (ENSPNAG00000020298) #14	PPIP5K2 (ENSPNAG00000020717) #15	PAM (ENSPNAG00000020822) #17	st8sia4 (ENSPNAG00000020852) #22	ENSPNAG00000020862	chd1 (ENSPNAG00000020956) #25	reep5 (ENSPNAG00000020973)	dcp2 (ENSPNAG00000021008)	ENSPNAG00000021022	zgc:114200 (ENSPNAG00000021057)	tpm2 (ENSPNAG00000005584)	ENSPNAG00000021120	tln1 (ENSPNAG00000021273)	hmgcs1 (ENSPNAG00000021331)	MAP3K1 (ENSPNAG00000006470)	ANKRD55 (ENSPNAG00000003682)	il6st (ENSPNAG00000021433)	ENSPNAG00000021495	ddx4 (ENSPNAG00000003686)
Mexicana tetra	MODERN SPECIES	53	cdc42se2 (ENSAMXG00000011897)	sptlc1 (ENSAMXG00000011763)	ROR2 (ENSAMXG00000011677)	nfil3 (ENSAMXG00000024924)	auh (ENSAMXG00000030066)	DIRAS2 (ENSAMXG00000024923)	syk (ENSAMXG00000036960)	ENSAMXG00000011493 #13	ENSAMXG00000011455	LYZ (ENSAMXG00000011433)	ENSAMXG00000031427	ENSAMXG00000036707	macir (ENSAMXG00000024921) #14	PPIP5K2 (ENSAMXG00000011364) #15	PAM (ENSAMXG00000011133) #17	st8sia4 (ENSAMXG00000034725) #22	chd1 (ENSAMXG00000010843) #25	ENSAMXG00000036284 #25	ENSAMXG00000035096	reep5 (ENSAMXG00000043360)	dcp2 (ENSAMXG00000030817)	ENSAMXG00000010596	zgc:114200 (ENSAMXG00000038107)
Electric eel	MODERN SPECIES	130	ENSEEEG00000019576	lyrm7 (ENSEEEG00000019578)	cdc42se2 (ENSEEEG00000019579)	sptlc1 (ENSEEEG00000019588)	ROR2 (ENSEEEG00000019778)	ENSEEEG00000019781	nfil3 (ENSEEEG00000019782)	auh (ENSEEEG00000019785)	syk (ENSEEEG00000019803)	DIRAS2 (ENSEEEG00000019813)	ENSEEEG00000019814	ENSEEEG00000019817	LYZ (ENSEEEG00000019823)	macir (ENSEEEG00000019868) #14	PAM (ENSEEEG00000019915) #17	st8sia4 (ENSEEEG00000019917) #22	ENSEEEG00000019944	reep5 (ENSEEEG00000020293)	dcp2 (ENSEEEG00000020309)	ENSEEEG00000020310	zgc:114200 (ENSEEEG00000020311)	tpm2 (ENSEEEG00000020339)	tln1 (ENSEEEG00000020656)	hmgcs1 (ENSEEEG00000020904)	MAP3K1 (ENSEEEG00000020908)	ANKRD55 (ENSEEEG00000020917)	il6st (ENSEEEG00000020919)	ENSEEEG00000020921	ENSEEEG00000020922	ddx4 (ENSEEEG00000020926)	slc38a9 (ENSEEEG00000020946)
Channel catfish	MODERN SPECIES	7	mat2al (ENSIPUG00000024958)	lyrm7 (ENSIPUG00000024959)	cdc42se2 (ENSIPUG00000024960)	sptlc1 (ENSIPUG00000024961)	ror2 (ENSIPUG00000024965)	ENSIPUG00000024967	nfil3 (ENSIPUG00000024968)	auh (ENSIPUG00000024969)	syk (ENSIPUG00000024970)	Diras2 (ENSIPUG00000024977)	ENSIPUG00000024978 #13	lysc (ENSIPUG00000024982)	macir (ENSIPUG00000024986) #14	ppip5k2 (ENSIPUG00000001177) #15	pam (ENSIPUG00000001295) #17	St8sia4 (ENSIPUG00000001344) #22	chd1 (ENSIPUG00000001369) #25	ENSIPUG00000001443	reep5 (ENSIPUG00000001450)	dcp2 (ENSIPUG00000001485)	ENSIPUG00000001514	zgc:114200 (ENSIPUG00000001527)	tpm2 (ENSIPUG00000001561)	tln1 (ENSIPUG00000001654)	HMGCS1 (ENSIPUG00000001731)	map3k1 (ENSIPUG00000001768)	ANKRD55 (ENSIPUG00000001788)	il6st (ENSIPUG00000001807)	ENSIPUG00000001825	ddx4 (ENSIPUG00000001845)	slc38a9 (ENSIPUG00000001918)
Cyprinoidei	ANCESTRAL SPECIES	84											ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00530000064469 #13	ENSGT00940000158196	ENSGT00940000159053	ENSGT00940000157484	ENSGT00940000160540	ENSGT00940000175401	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000158245.ec.b	ENSGT00990000203922.f.b	ENSGT00390000003175.a.b	ENSGT00940000164013.b	ENSGT01030000234578.A.a	ENSGT00440000039914	ENSGT00940000154426
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	920														ENSGT00940000155603.A.a.a.a.m	ENSGT00940000156369.g #17	ENSGT01030000234535.F.b.a #22	ENSGT00530000064469.d #13	ENSGT00940000159053.a	ENSGT00940000157484.t
Cyprininae_a	ANCESTRAL SPECIES	731														ENSGT00940000155603.A.a.a.a.m	ENSGT00940000156369.g #17	ENSGT01030000234535.F.b.a #22	ENSGT00530000064469.c.b #13	ENSGT00940000159053.a
Common carp reference	MODERN SPECIES	32	ENSCCRG00000002436 #15	macir (ENSCCRG00000056900) #14	chd1 (ENSCCRG00000003831) #25	reep5 (ENSCCRG00000054338)	dcp2 (ENSCCRG00000002409)	ENSCCRG00000065263	ENSCCRG00000007358	zgc:114200 (ENSCCRG00000002403)	tpm2 (ENSCCRG00000002022)	tln1 (ENSCCRG00000023720)	hmgcs1 (ENSCCRG00000049931)	ENSCCRG00000008706	ENSCCRG00000045181	il6st (ENSCCRG00000074828)	ENSCCRG00000009425 #17	st8sia4 (ENSCCRG00000009416) #22	DIRAS2 (ENSCCRG00000056500)	syk (ENSCCRG00000053057)	auh (ENSCCRG00000058814)	nfil3 (ENSCCRG00000069614)	ENSCCRG00000000251	ROR2 (ENSCCRG00000058752)	sptlc1 (ENSCCRG00000073416)	sec31a (ENSCCRG00000009144)	ENSCCRG00000055716	ENSCCRG00000073332	ENSCCRG00000017621	TMEM150C (ENSCCRG00000017620)	hnrnpdl (ENSCCRG00000063006)	enoph1 (ENSCCRG00000068587)	hnrnpd (ENSCCRG00000017619)
Golden-line barbel	MODERN SPECIES	723												MAP3K1 (ENSSGRG00000022180)	ENSSGRG00000022179	il6st (ENSSGRG00000022178)	PAM (ENSSGRG00000022176) #17	st8sia4 (ENSSGRG00000022174) #22	ENSSGRG00000022172 #13	DIRAS2 (ENSSGRG00000022171)	syk (ENSSGRG00000021914)	ENSSGRG00000021905	nfil3 (ENSSGRG00000021902)	ROR2 (ENSSGRG00000021901)	sptlc1 (ENSSGRG00000021814)	cdc42se2 (ENSSGRG00000021810)	zgc:113274 (ENSSGRG00000021809)	sec31a (ENSSGRG00000021165)
Goldfish	MODERN SPECIES	28	ENSCARG00000069644	PPIP5K2 (ENSCARG00000069779) #15	ENSCARG00000070149	chd1 (ENSCARG00000070202) #25	reep5 (ENSCARG00000070341)	dcp2 (ENSCARG00000070342)	ENSCARG00000070344	zgc:114200 (ENSCARG00000070349)	tpm2 (ENSCARG00000070351)	tln1 (ENSCARG00000070364)	hmgcs1 (ENSCARG00000070381)	MAP3K1 (ENSCARG00000070388)	ANKRD55 (ENSCARG00000070410)	il6st (ENSCARG00000070421)	PAM (ENSCARG00000070439) #17	st8sia4 (ENSCARG00000070446) #22	ENSCARG00000070447 #13	ENSCARG00000070448 #13	DIRAS2 (ENSCARG00000070449)	syk (ENSCARG00000070451)	nfil3 (ENSCARG00000070452)	ENSCARG00000070453	ROR2 (ENSCARG00000070454)	sptlc1 (ENSCARG00000070455)	cdc42se2 (ENSCARG00000070469)	sec31a (ENSCARG00000070475)	ENSCARG00000070476	ENSCARG00000070477	TMEM150C (ENSCARG00000070478)	enoph1 (ENSCARG00000070479)	hnrnpdl (ENSCARG00000015682)
Cyprininae	ANCESTRAL SPECIES	186	ENSGT00940000154426	ENSGT00440000039914.y.a	ENSGT01030000234578.A.a.c	ENSGT00940000164013.b	ENSGT00390000003175.a.b.b	ENSGT00990000203922.f.b	ENSGT00940000158245.ec.a	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484.s	ENSGT00950000182908.A.d	ENSGT00940000155603.A.a.a.a.n	ENSGT00940000156369.h #17	ENSGT01030000234535.F.b.b #22	ENSGT00530000064469.c.a #13	ENSGT00530000064469.c.b #13	ENSGT00940000158196	ENSGT00940000159053.b	ENSGT00950000182908.A.c	ENSGT00940000159154	ENSGT00390000006096.a.b	ENSGT00940000157006.m	ENSGT01030000234542.b.b.a.a.a.a.e.b	ENSGT00390000002049.d.d	ENSGT00940000156893.lb.a	ENSGT00390000018878.k	ENSGT00940000157873.c.b	ENSGT00940000157873.d	ENSGT00940000156579 #25
Cyprininae_a	ANCESTRAL SPECIES	298	ENSGT01030000234578.A.a.c	ENSGT00940000164013.b	ENSGT00390000003175.a.b.b	ENSGT00990000203922.f.b	ENSGT00940000158245.ec.a	ENSGT00550000074872	ENSGT00940000153947.A.f	ENSGT00940000175401	ENSGT00940000153947.A.e	ENSGT00940000160540	ENSGT00940000157484.t	ENSGT00940000157484.s	ENSGT00950000182908.A.d	ENSGT00940000155603.A.a.a.a.n	ENSGT00940000156369.h #17	ENSGT01030000234535.F.b.b #22	ENSGT00530000064469.c.a #13	ENSGT00940000158196	ENSGT00940000159053.b	ENSGT00950000182908.A.c	ENSGT00940000159154	ENSGT00390000006096.a.b	ENSGT00940000157006.m.b	ENSGT01030000234542.b.b.a.a.a.a.e.a	ENSGT00390000002049.d.d	ENSGT00940000156893.lb.a	ENSGT00390000018878.k	ENSGT00940000157873.c.b
Common carp reference	MODERN SPECIES	24	si:ch73-234b20.5 (ENSCCRG00000077754)	hnrnpd (ENSCCRG00000037389)	enoph1 (ENSCCRG00000070398)	TMEM150C (ENSCCRG00000037391)	ENSCCRG00000037402	sec31a (ENSCCRG00000037440)	zgc:113274 (ENSCCRG00000060743)	SPTLC1 (ENSCCRG00000009276)	ROR2 (ENSCCRG00000060844)	nfil3 (ENSCCRG00000067998)	ENSCCRG00000000897	AUH (ENSCCRG00000079592)	ENSCCRG00000049609	il6st (ENSCCRG00000014461)	ENSCCRG00000003183 #17	st8sia4 (ENSCCRG00000002848) #22	ENSCCRG00000002819 #13	ENSCCRG00000080052	syk (ENSCCRG00000002622)	ENSCCRG00000008655	hmgcs1 (ENSCCRG00000082677)	tln1 (ENSCCRG00000047910)	tpm2 (ENSCCRG00000077616)	zgc:114200 (ENSCCRG00000058903)	ENSCCRG00000040153	dcp2 (ENSCCRG00000040144)	reep5 (ENSCCRG00000001606)	chd1 (ENSCCRG00000046162) #25	macir (ENSCCRG00000065620) #14	ENSCCRG00000017343 #15	ddx4 (ENSCCRG00000058075)
Golden-line barbel	MODERN SPECIES	636	hnrnpd (ENSSGRG00000021752)	si:ch73-234b20.5 (ENSSGRG00000021754)	ENSSGRG00000021755	hnrnpdl (ENSSGRG00000021757)	enoph1 (ENSSGRG00000021824)	TMEM150C (ENSSGRG00000021827)	TMEM150C (ENSSGRG00000021830)	ENSSGRG00000021835	sec31a (ENSSGRG00000021854)	CDC42SE2 (ENSSGRG00000022307)	sptlc1 (ENSSGRG00000022308)	ROR2 (ENSSGRG00000022309)	auh (ENSSGRG00000022311)	il6st (ENSSGRG00000022328)	PAM (ENSSGRG00000022369) #17	st8sia4 (ENSSGRG00000023488) #22	ENSSGRG00000023490 #13	DIRAS2 (ENSSGRG00000023493)	DIRAS2 (ENSSGRG00000023494)	syk (ENSSGRG00000023495)	MAP3K1 (ENSSGRG00000023496)
Goldfish	MODERN SPECIES	1	hnrnpdl (ENSCARG00000040426)	enoph1 (ENSCARG00000040408)	TMEM150C (ENSCARG00000040374)	ENSCARG00000039931	CDS2 (ENSCARG00000039903)	sec31a (ENSCARG00000039407)	zgc:113274 (ENSCARG00000039357)	cdc42se2 (ENSCARG00000039339)	sptlc1 (ENSCARG00000038916)	ROR2 (ENSCARG00000038857)	nfil3 (ENSCARG00000038836)	auh (ENSCARG00000038716)	ANKRD55 (ENSCARG00000038605)	il6st (ENSCARG00000038511)	PAM (ENSCARG00000033111) #17	st8sia4 (ENSCARG00000032903) #22	ENSCARG00000032881 #13	ENSCARG00000032893 #13	ENSCARG00000032873	DIRAS2 (ENSCARG00000032864)	syk (ENSCARG00000032674)	MAP3K1 (ENSCARG00000032440)	hmgcs1 (ENSCARG00000032343)	tln1 (ENSCARG00000031215)	tpm2 (ENSCARG00000030269)	zgc:114200 (ENSCARG00000030227)	ENSCARG00000030221	dcp2 (ENSCARG00000030205)	reep5 (ENSCARG00000030112)	chd1 (ENSCARG00000029856) #25	macir (ENSCARG00000029818) #14
Zebrafish	MODERN SPECIES	1	ENSDARG00000095853	ENSDARG00000095927	chd1 (ENSDARG00000103787) #25	reep5 (ENSDARG00000100742)	dcp2 (ENSDARG00000104242)	ENSDARG00000102300	zgc:114200 (ENSDARG00000100633)	tpm2 (ENSDARG00000104682)	tln1 (ENSDARG00000100729)	hmgcs1 (ENSDARG00000103025)	MAP3K1 (ENSDARG00000098405)	ENSDARG00000098133	ANKRD55 (ENSDARG00000099182)	il6st (ENSDARG00000104693)	PAM (ENSDARG00000100170) #17	st8sia4 (ENSDARG00000103600) #22	ENSDARG00000102251 #13	syk (ENSDARG00000008186)	auh (ENSDARG00000042975)	nfil3 (ENSDARG00000042977)	ENSDARG00000097088	ROR2 (ENSDARG00000076227)	sptlc1 (ENSDARG00000042995)	cdc42se2 (ENSDARG00000094577)	ENSDARG00000093630	zgc:113274 (ENSDARG00000059235)	sec31a (ENSDARG00000021082)	ENSDARG00000091531	TMEM150C (ENSDARG00000069590)	enoph1 (ENSDARG00000026198)	hnrnpdl (ENSDARG00000003429)
Clupeiformes	ANCESTRAL SPECIES	3	ENSGT01050000244857.C.b	ENSGT00390000017923	ENSGT00940000158245	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000175401	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000159053	ENSGT00940000158196	ENSGT00530000064469 #13	ENSGT00940000153832	ENSGT00390000005782 #14	ENSGT00390000009048.a.b #15	ENSGT00940000156369 #17	ENSGT01030000234535.F.b #22	ENSGT00940000169704	ENSGT00940000156579 #25	ENSGT00940000157873	ENSGT00390000018878	ENSGT00390000002049.d	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000159154	ENSGT00950000182908.A	ENSGT00940000155603.A.a.a.a	ENSGT00940000155603.A.b.d	ENSGT00940000157507	ENSGT00390000005646	ENSGT00940000157357.f
Denticle herring	MODERN SPECIES	13	hint1 (ENSDCDG00000003576)	lyrm7 (ENSDCDG00000003580)	cdc42se2 (ENSDCDG00000003586)	sptlc1 (ENSDCDG00000003597)	ROR2 (ENSDCDG00000003620)	ENSDCDG00000003626	nfil3 (ENSDCDG00000003627)	auh (ENSDCDG00000003628)	syk (ENSDCDG00000003646)	DIRAS2 (ENSDCDG00000003655)	ENSDCDG00000003658 #13	LYZ (ENSDCDG00000003660)	macir (ENSDCDG00000003661) #14	PPIP5K2 (ENSDCDG00000003744) #15	PAM (ENSDCDG00000011084) #17	st8sia4 (ENSDCDG00000017049) #22	chd1 (ENSDCDG00000017181) #25	reep5 (ENSDCDG00000025181)	dcp2 (ENSDCDG00000025185)	ENSDCDG00000025186	zgc:114200 (ENSDCDG00000025188)	tpm2 (ENSDCDG00000025300)	tln1 (ENSDCDG00000026469)	hmgcs1 (ENSDCDG00000028016)	MAP3K1 (ENSDCDG00000028034)	ANKRD55 (ENSDCDG00000028065)	il6st (ENSDCDG00000028074)	ENSDCDG00000028086	ddx4 (ENSDCDG00000028102)	slc38a9 (ENSDCDG00000028127)	ENSDCDG00000028172
Atlantic herring	MODERN SPECIES	3	cdc42se2 (ENSCHAG00000001047)	sptlc1 (ENSCHAG00000000610)	ROR2 (ENSCHAG00000020052)	nfil3 (ENSCHAG00000020043)	auh (ENSCHAG00000019965)	syk (ENSCHAG00000019937)	DIRAS2 (ENSCHAG00000019934)	ENSCHAG00000019903 #13	ENSCHAG00000019793	LYZ (ENSCHAG00000019784)	LYZ (ENSCHAG00000019758)	ENSCHAG00000019693	macir (ENSCHAG00000019689) #14	PPIP5K2 (ENSCHAG00000019322) #15	PAM (ENSCHAG00000019116) #17	st8sia4 (ENSCHAG00000019091) #22	ENSCHAG00000019073	chd1 (ENSCHAG00000018116) #25	reep5 (ENSCHAG00000018041)	dcp2 (ENSCHAG00000017980)	ENSCHAG00000017958	zgc:114200 (ENSCHAG00000017930)	ANKRD55 (ENSCHAG00000017845)	ENSCHAG00000017837	tln1 (ENSCHAG00000016169)	hmgcs1 (ENSCHAG00000015925)	ANKRD55 (ENSCHAG00000015383)	il6st (ENSCHAG00000015157)	ddx4 (ENSCHAG00000015035)	slc38a9 (ENSCHAG00000014949)	ENSCHAG00000014874
Spotted gar	MODERN SPECIES	658	hsd17b3 (ENSLOCG00000009228)	ENSLOCG00000009217	znf367 (ENSLOCG00000009209)	ENSLOCG00000009195	ENSLOCG00000009181	PRXL2C (ENSLOCG00000009173)	ENSLOCG00000009168	EFNA5 (ENSLOCG00000009155) #7	nudt12 (ENSLOCG00000009146) #12	ENSLOCG00000009132 #13	macir (ENSLOCG00000017536) #14	PPIP5K2 (ENSLOCG00000009118) #15	PAM (ENSLOCG00000009107) #17	SLCO4C1 (ENSLOCG00000009096) #18	ENSLOCG00000009080 ##18	st8sia4 (ENSLOCG00000009075) #22	FAM174A (ENSLOCG00000009066) #23	chd1 (ENSLOCG00000009047) #25	reep5 (ENSLOCG00000009034)	dcp2 (ENSLOCG00000009013)	MCC (ENSLOCG00000009005)	YTHDC2 (ENSLOCG00000009001)	KCNN2 (ENSLOCG00000008989)	trim36 (ENSLOCG00000008980)	pggt1b (ENSLOCG00000008973)	CCDC112 (ENSLOCG00000008955)	fem1c (ENSLOCG00000008945)	tmed7 (ENSLOCG00000008936)	cdo1 (ENSLOCG00000008927)	AP3S1 (ENSLOCG00000008916)	LVRN (ENSLOCG00000008894)
Reedfish	MODERN SPECIES	15	ENSECRG00000006152	PRXL2C (ENSECRG00000006134)	ENSECRG00000006124	ENSECRG00000006116	ENSECRG00000006107	EFNA5 (ENSECRG00000006097) #7	nudt12 (ENSECRG00000006079) #12	ENSECRG00000006065 #13	macir (ENSECRG00000006054) #14	PPIP5K2 (ENSECRG00000006046) #15	PAM (ENSECRG00000005993) #17	SLCO4C1 (ENSECRG00000005955) #18	ENSECRG00000005935 ##18	ENSECRG00000005634 ##18	ENSECRG00000005582	st8sia4 (ENSECRG00000005576) #22	FAM174A (ENSECRG00000005569) #23	ENSECRG00000005561	chd1 (ENSECRG00000005529) #25	reep5 (ENSECRG00000005512)	ENSECRG00000005499	MCC (ENSECRG00000005480)	YTHDC2 (ENSECRG00000005460)	KCNN2 (ENSECRG00000005448)	trim36 (ENSECRG00000005429)	pggt1b (ENSECRG00000005404)	CCDC112 (ENSECRG00000005389)	fem1c (ENSECRG00000005385)	tmed7 (ENSECRG00000005375)	ENSECRG00000005364	cdo1 (ENSECRG00000005351)